Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22341.t1 | XP_003611052.1 | 94.6 | 317 | 10 | 1 | 4 | 313 | 57 | 373 | 9.60E-163 | 582.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22341.t1 | Q0JL44 | 63.7 | 311 | 105 | 3 | 5 | 313 | 62 | 366 | 6.0e-105 | 382.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22341.t1 | G7KBZ4 | 94.6 | 317 | 10 | 1 | 4 | 313 | 57 | 373 | 7.0e-163 | 582.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049711 | MS.gene22341 | 0.805852 | 1.09E-49 | -1.69E-46 |
| MS.gene051744 | MS.gene22341 | 0.800192 | 1.62E-48 | -1.69E-46 |
| MS.gene053079 | MS.gene22341 | 0.814465 | 1.52E-51 | -1.69E-46 |
| MS.gene05458 | MS.gene22341 | 0.814274 | 1.67E-51 | -1.69E-46 |
| MS.gene055513 | MS.gene22341 | 0.811384 | 7.19E-51 | -1.69E-46 |
| MS.gene05686 | MS.gene22341 | 0.839387 | 1.63E-57 | -1.69E-46 |
| MS.gene059625 | MS.gene22341 | 0.803473 | 3.43E-49 | -1.69E-46 |
| MS.gene059778 | MS.gene22341 | 0.822361 | 2.47E-53 | -1.69E-46 |
| MS.gene060522 | MS.gene22341 | 0.803073 | 4.15E-49 | -1.69E-46 |
| MS.gene060933 | MS.gene22341 | 0.80248 | 5.50E-49 | -1.69E-46 |
| MS.gene061100 | MS.gene22341 | 0.823591 | 1.28E-53 | -1.69E-46 |
| MS.gene061160 | MS.gene22341 | 0.803927 | 2.76E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene22341 | MS.gene81472 | PPI |
| MS.gene22341 | MS.gene83993 | PPI |
| MS.gene22341 | MS.gene95813 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22341.t1 | MTR_5g009930 | 94.637 | 317 | 10 | 1 | 4 | 313 | 57 | 373 | 0.0 | 616 |
| MS.gene22341.t1 | MTR_5g009930 | 93.145 | 248 | 10 | 1 | 4 | 244 | 57 | 304 | 8.43e-170 | 474 |
| MS.gene22341.t1 | MTR_6g053290 | 62.025 | 316 | 96 | 5 | 5 | 313 | 58 | 356 | 1.07e-134 | 386 |
| MS.gene22341.t1 | MTR_6g053290 | 58.683 | 334 | 96 | 6 | 5 | 313 | 58 | 374 | 1.46e-129 | 374 |
| MS.gene22341.t1 | MTR_6g060735 | 43.000 | 100 | 39 | 4 | 154 | 246 | 59 | 147 | 1.40e-13 | 68.2 |
| MS.gene22341.t1 | MTR_6g060740 | 46.154 | 78 | 31 | 2 | 169 | 244 | 4 | 72 | 1.87e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22341.t1 | AT4G23570 | 63.810 | 315 | 85 | 8 | 5 | 313 | 58 | 349 | 5.32e-133 | 382 |
| MS.gene22341.t1 | AT4G23570 | 63.810 | 315 | 85 | 8 | 5 | 313 | 58 | 349 | 5.32e-133 | 382 |
| MS.gene22341.t1 | AT4G23570 | 63.810 | 315 | 85 | 8 | 5 | 313 | 59 | 350 | 6.34e-133 | 382 |
| MS.gene22341.t1 | AT4G11260 | 62.058 | 311 | 105 | 5 | 5 | 313 | 58 | 357 | 4.86e-125 | 362 |
Find 78 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCCAGACGAATTTCAATTT+TGG | 0.202093 | 5.1:-3464479 | None:intergenic |
| TAAAATTCAAACCTGTATTT+TGG | 0.207831 | 5.1:-3463456 | None:intergenic |
| AGATAAGCTTTAGACAAATT+AGG | 0.217599 | 5.1:-3462169 | None:intergenic |
| TCATGTCCTCATCTGCATTT+TGG | 0.223925 | 5.1:-3465532 | None:intergenic |
| CTGAAGGCACAATTATCTTT+TGG | 0.232230 | 5.1:-3464555 | None:intergenic |
| TGCATTTGTTTGGGATTCTT+TGG | 0.233284 | 5.1:-3463418 | None:intergenic |
| ACCACAACTTTGCACTTATC+AGG | 0.255504 | 5.1:-3464448 | None:intergenic |
| TTGAATCAAATTAGTGAATC+TGG | 0.262555 | 5.1:-3462378 | None:intergenic |
| AATTACCAACCTCGATTGTT+TGG | 0.273321 | 5.1:+3464245 | MS.gene22341:CDS |
| GATAAGCTTTAGACAAATTA+GGG | 0.273607 | 5.1:-3462168 | None:intergenic |
| CTGGTGCAACTGCATTTGTT+TGG | 0.277385 | 5.1:-3463428 | None:intergenic |
| CAAAAGCTGAAGCAATTAAT+TGG | 0.291230 | 5.1:+3464500 | MS.gene22341:CDS |
| CAACCACTTCTTCTGGCTTC+TGG | 0.307212 | 5.1:-3463986 | None:intergenic |
| AACAGACGCAGCAGATGATT+TGG | 0.309310 | 5.1:-3463358 | None:intergenic |
| ATTGTCACAACCACTTCTTC+TGG | 0.326332 | 5.1:-3463993 | None:intergenic |
| TTCTTCACCTCCATGCCTTC+CGG | 0.334065 | 5.1:-3465775 | None:intergenic |
| CATCACTCTTATCACACATA+TGG | 0.343614 | 5.1:-3463389 | None:intergenic |
| GCAGATGATTTGGGTTCATT+TGG | 0.361318 | 5.1:-3463348 | None:intergenic |
| TGGTGCAACTGCATTTGTTT+GGG | 0.369271 | 5.1:-3463427 | None:intergenic |
| GAACAGTGCTTTCAACTGAT+TGG | 0.383406 | 5.1:+3465716 | MS.gene22341:CDS |
| AGTGTTACCATTGATGTTCC+TGG | 0.384771 | 5.1:+3464209 | MS.gene22341:CDS |
| TGCTAAGATTGCACTTGAAA+AGG | 0.395581 | 5.1:+3462331 | MS.gene22341:CDS |
| ATTTGGGTTCATTTGGTGGT+AGG | 0.397979 | 5.1:-3463341 | None:intergenic |
| GCTAAGATTGCACTTGAAAA+GGG | 0.398330 | 5.1:+3462332 | MS.gene22341:CDS |
| GACTAAGGATTGGGATAAGT+TGG | 0.404465 | 5.1:+3464935 | MS.gene22341:CDS |
| CAAAAGATAATTGTGCCTTC+AGG | 0.411330 | 5.1:+3464556 | MS.gene22341:CDS |
| CAAATTAGGGTTCAATTGAA+TGG | 0.412131 | 5.1:-3462155 | None:intergenic |
| ACAGACGCAGCAGATGATTT+GGG | 0.413414 | 5.1:-3463357 | None:intergenic |
| AGCAATTAATTGGACATCTC+TGG | 0.420967 | 5.1:+3464510 | MS.gene22341:CDS |
| GTTGTGACAATATTTGCAAA+AGG | 0.432373 | 5.1:+3464005 | MS.gene22341:CDS |
| GACTTTGATGACGGATATGC+AGG | 0.432961 | 5.1:-3464909 | None:intergenic |
| AAGGCATGGAGGTGAAGAAA+TGG | 0.447230 | 5.1:+3465779 | MS.gene22341:CDS |
| GAGAAAGAAGAAAAGCTTGA+TGG | 0.457639 | 5.1:+3465473 | MS.gene22341:CDS |
| TTTGGGTTCATTTGGTGGTA+GGG | 0.457656 | 5.1:-3463340 | None:intergenic |
| GAAAATGTTGTTGTGGACTT+TGG | 0.457793 | 5.1:+3464038 | MS.gene22341:CDS |
| TTCAACTGATTGGAAAGAAG+TGG | 0.459056 | 5.1:+3465726 | MS.gene22341:CDS |
| CAAAGTCAAGGACTAAGGAT+TGG | 0.459819 | 5.1:+3464925 | MS.gene22341:CDS |
| AACCAAAATTGAAATTCGTC+TGG | 0.463865 | 5.1:+3464477 | MS.gene22341:CDS |
| GTTGGTAATTGTAGGCATCT+TGG | 0.464918 | 5.1:-3464232 | None:intergenic |
| CAATCGAGGTTGGTAATTGT+AGG | 0.468328 | 5.1:-3464240 | None:intergenic |
| ATCACTCTTATCACACATAT+GGG | 0.469660 | 5.1:-3463388 | None:intergenic |
| GATGATTTGGGTTCATTTGG+TGG | 0.474276 | 5.1:-3463345 | None:intergenic |
| CACCAGTCAGACCAAAATAC+AGG | 0.477363 | 5.1:+3463445 | MS.gene22341:CDS |
| AAAGTCAAGGACTAAGGATT+GGG | 0.477566 | 5.1:+3464926 | MS.gene22341:CDS |
| ACATCGCAGCTGGAGTCAAA+TGG | 0.493337 | 5.1:+3465694 | MS.gene22341:intron |
| TAATTGTAGGCATCTTGGCC+AGG | 0.499111 | 5.1:-3464227 | None:intergenic |
| GTCATCAAAGTCAAGGACTA+AGG | 0.505114 | 5.1:+3464920 | MS.gene22341:CDS |
| TTGTGACAATATTTGCAAAA+GGG | 0.517563 | 5.1:+3464006 | MS.gene22341:CDS |
| CTAAAGCTTATCTTCGCAAA+GGG | 0.517803 | 5.1:+3462179 | MS.gene22341:CDS |
| AGGCATGGAGGTGAAGAAAT+GGG | 0.525573 | 5.1:+3465780 | MS.gene22341:CDS |
| GTGGGATCAAAGAAGGTGGA+AGG | 0.527275 | 5.1:+3465745 | MS.gene22341:CDS |
| ACCTGATAAGTGCAAAGTTG+TGG | 0.535317 | 5.1:+3464447 | MS.gene22341:CDS |
| TCTAAAGCTTATCTTCGCAA+AGG | 0.536711 | 5.1:+3462178 | MS.gene22341:CDS |
| TGTCAACGCTTCATTGCTGC+TGG | 0.540905 | 5.1:+3462404 | MS.gene22341:CDS |
| TTGGTGGTAGGGTGCTCGTA+AGG | 0.545824 | 5.1:-3463329 | None:intergenic |
| TTAGTCCTTGACTTTGATGA+CGG | 0.547734 | 5.1:-3464918 | None:intergenic |
| GAAAGAAGTGGGATCAAAGA+AGG | 0.549782 | 5.1:+3465738 | MS.gene22341:CDS |
| AGAAGTGGGATCAAAGAAGG+TGG | 0.550429 | 5.1:+3465741 | MS.gene22341:CDS |
| TCAACTGATTGGAAAGAAGT+GGG | 0.552602 | 5.1:+3465727 | MS.gene22341:CDS |
| AGGAAGTCCTCCGGAAGGCA+TGG | 0.553293 | 5.1:+3465765 | MS.gene22341:CDS |
| CCTTTCCAAACAATCGAGGT+TGG | 0.558787 | 5.1:-3464250 | None:intergenic |
| TTCACCTCCATGCCTTCCGG+AGG | 0.562191 | 5.1:-3465772 | None:intergenic |
| TTAGTGAATCTGGAATCATC+AGG | 0.564312 | 5.1:-3462368 | None:intergenic |
| TTACCAGAAGCCAGAAGAAG+TGG | 0.567554 | 5.1:+3463983 | MS.gene22341:CDS |
| ATCTTGGCCAGGAACATCAA+TGG | 0.567721 | 5.1:-3464216 | None:intergenic |
| CCAACCTCGATTGTTTGGAA+AGG | 0.572336 | 5.1:+3464250 | MS.gene22341:CDS |
| GAAGGTGGAAGGAAGTCCTC+CGG | 0.593651 | 5.1:+3465756 | MS.gene22341:CDS |
| GACATCTCTGGAATATAGCA+AGG | 0.594841 | 5.1:+3464522 | MS.gene22341:CDS |
| CTAAGATTGCACTTGAAAAG+GGG | 0.595811 | 5.1:+3462333 | MS.gene22341:CDS |
| ACCAGCAGAAAATGTTGTTG+TGG | 0.599108 | 5.1:+3464031 | MS.gene22341:CDS |
| TTTCTGCAGTTCAATCTGAA+AGG | 0.605938 | 5.1:+3464886 | MS.gene22341:intron |
| CATATCCGTCATCAAAGTCA+AGG | 0.618238 | 5.1:+3464913 | MS.gene22341:CDS |
| GTTACCTTTCCAAACAATCG+AGG | 0.633356 | 5.1:-3464254 | None:intergenic |
| TAAGATTGCACTTGAAAAGG+GGG | 0.634057 | 5.1:+3462334 | MS.gene22341:CDS |
| TATTTACCAAAATGCAGATG+AGG | 0.640349 | 5.1:+3465526 | MS.gene22341:CDS |
| AAAATGCAGATGAGGACATG+AGG | 0.646902 | 5.1:+3465534 | MS.gene22341:CDS |
| GTGGAAGGAAGTCCTCCGGA+AGG | 0.675797 | 5.1:+3465760 | MS.gene22341:CDS |
| AAGTCCTCCGGAAGGCATGG+AGG | 0.703156 | 5.1:+3465768 | MS.gene22341:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTAAAAACTAAAATTC+TGG | - | chr5.1:3466030-3466049 | None:intergenic | 10.0% |
| !! | AAATTAAAAACTAAAATTCT+GGG | - | chr5.1:3466029-3466048 | None:intergenic | 10.0% |
| !! | ATTATAGTTATACAATAATA+AGG | - | chr5.1:3463660-3463679 | None:intergenic | 10.0% |
| !!! | AATATTTATGTTTTGTTTTT+AGG | + | chr5.1:3462228-3462247 | MS.gene22341:intron | 10.0% |
| !!! | ATATTTATGTTTTGTTTTTA+GGG | + | chr5.1:3462229-3462248 | MS.gene22341:intron | 10.0% |
| !!! | GATTTGATTTATTTTTATTT+TGG | + | chr5.1:3461814-3461833 | MS.gene22341:intron | 10.0% |
| !!! | GATTTTAATTATACTATTAT+TGG | + | chr5.1:3465600-3465619 | MS.gene22341:intron | 10.0% |
| !!! | TAATTTTCTCTAATTATTAT+CGG | + | chr5.1:3464702-3464721 | MS.gene22341:intron | 10.0% |
| !!! | TGATTTTTGTAAATTTTATT+TGG | + | chr5.1:3462463-3462482 | MS.gene22341:intron | 10.0% |
| !!! | TTATGTTTTTATTTATTTAG+GGG | + | chr5.1:3464998-3465017 | MS.gene22341:intron | 10.0% |
| !!! | TTTTAATCAAAAGTTTTTAA+GGG | + | chr5.1:3463720-3463739 | MS.gene22341:intron | 10.0% |
| !!! | TTTTATCCTTTTTTTTTTAA+GGG | - | chr5.1:3461748-3461767 | None:intergenic | 10.0% |
| !!! | TTTTTATCCTTTTTTTTTTA+AGG | - | chr5.1:3461749-3461768 | None:intergenic | 10.0% |
| !! | AAAAAATTATGTATGCAAAT+TGG | + | chr5.1:3465143-3465162 | MS.gene22341:intron | 15.0% |
| !! | ACAATTTCAATTTAAAAACT+TGG | + | chr5.1:3462738-3462757 | MS.gene22341:intron | 15.0% |
| !! | AGAAAAAATATAGTAATGAT+AGG | + | chr5.1:3461703-3461722 | MS.gene22341:intron | 15.0% |
| !! | AGTGATATACATATAAAATA+AGG | - | chr5.1:3464130-3464149 | None:intergenic | 15.0% |
| !! | TAATTGTTGAATGAATAAAT+AGG | + | chr5.1:3464809-3464828 | MS.gene22341:intron | 15.0% |
| !! | TAGATATTAAAAAAATTTGC+AGG | - | chr5.1:3462702-3462721 | None:intergenic | 15.0% |
| !! | TGTATATTAGTAGAAAAATA+TGG | + | chr5.1:3461612-3461631 | MS.gene22341:intron | 15.0% |
| !! | TTAAAAGTAAAGAAAATAGA+AGG | + | chr5.1:3461775-3461794 | MS.gene22341:intron | 15.0% |
| !!! | ACTTTTGATTAAAAGTTTTT+CGG | - | chr5.1:3463714-3463733 | None:intergenic | 15.0% |
| !!! | CTTTTAATCAAAAGTTTTTA+AGG | + | chr5.1:3463719-3463738 | MS.gene22341:intron | 15.0% |
| !!! | TATTCATGTATTCAAAATTT+TGG | - | chr5.1:3465368-3465387 | None:intergenic | 15.0% |
| !!! | TGAATTTGTTTTATATTTGT+AGG | + | chr5.1:3462276-3462295 | MS.gene22341:intron | 15.0% |
| !!! | TGCAAATTTTTTTAATATCT+AGG | + | chr5.1:3462701-3462720 | MS.gene22341:intron | 15.0% |
| !!! | TTATTGTCATTTTATGAATA+CGG | + | chr5.1:3465173-3465192 | MS.gene22341:intron | 15.0% |
| !!! | TTTATCCTTTTTTTTTTAAG+GGG | - | chr5.1:3461747-3461766 | None:intergenic | 15.0% |
| !! | AAAAATTATCTAGTCATCAA+AGG | - | chr5.1:3463151-3463170 | None:intergenic | 20.0% |
| !! | AATATCATATAAGATGTTGT+TGG | - | chr5.1:3461583-3461602 | None:intergenic | 20.0% |
| !! | AGATGAAATTAACATACAAT+TGG | - | chr5.1:3465392-3465411 | None:intergenic | 20.0% |
| !! | ATATAAAATAAGGAGAACAA+TGG | - | chr5.1:3464120-3464139 | None:intergenic | 20.0% |
| !! | ATGCTAATAATATTGTGTTA+TGG | + | chr5.1:3461336-3461355 | MS.gene22341:intron | 20.0% |
| !! | CAATGTCAATTATTAAAACA+AGG | - | chr5.1:3465435-3465454 | None:intergenic | 20.0% |
| !! | TGAAAAAATAAAGAAACATC+AGG | - | chr5.1:3463295-3463314 | None:intergenic | 20.0% |
| !! | TTAAATAAAAAACATGCAAG+CGG | - | chr5.1:3463615-3463634 | None:intergenic | 20.0% |
| !!! | AATATTGTGGTTTAGATTTT+CGG | + | chr5.1:3463222-3463241 | MS.gene22341:intron | 20.0% |
| !!! | ACTGTATTTAATTTGTGAAA+AGG | + | chr5.1:3463114-3463133 | MS.gene22341:intron | 20.0% |
| !!! | ATGTTTCTTTATTTTTTCAG+AGG | + | chr5.1:3463296-3463315 | MS.gene22341:intron | 20.0% |
| !!! | ATTACTATATCTTTTCTTCA+TGG | - | chr5.1:3461396-3461415 | None:intergenic | 20.0% |
| !!! | CTTAAGTTTAGTTATGATTT+TGG | + | chr5.1:3465036-3465055 | MS.gene22341:intron | 20.0% |
| !!! | CTTCATTCATTTAATTTTGT+TGG | + | chr5.1:3463503-3463522 | MS.gene22341:intron | 20.0% |
| !!! | GTATGATATGTTATTTTTCT+GGG | + | chr5.1:3465915-3465934 | MS.gene22341:intron | 20.0% |
| !!! | TAAAATTCAAACCTGTATTT+TGG | - | chr5.1:3463459-3463478 | None:intergenic | 20.0% |
| !!! | TATTATCTGTTTTGTTCATA+AGG | - | chr5.1:3464428-3464447 | None:intergenic | 20.0% |
| !!! | TATTGTCATTTTATGAATAC+GGG | + | chr5.1:3465174-3465193 | MS.gene22341:intron | 20.0% |
| !!! | TGTATGATATGTTATTTTTC+TGG | + | chr5.1:3465914-3465933 | MS.gene22341:intron | 20.0% |
| !!! | TGTATGTTGATTTTAGTTAT+CGG | + | chr5.1:3465987-3466006 | MS.gene22341:intron | 20.0% |
| !!! | TGTTTTAATAATTGACATTG+TGG | + | chr5.1:3465435-3465454 | MS.gene22341:intron | 20.0% |
| !!! | TTTGAAGTATAGTATAGTAT+TGG | - | chr5.1:3461883-3461902 | None:intergenic | 20.0% |
| !!! | TTTTTCTTTTGCAAATATTG+TGG | + | chr5.1:3463209-3463228 | MS.gene22341:intron | 20.0% |
| ! | AAAAATTTGCAAGTCATCAA+AGG | - | chr5.1:3462948-3462967 | None:intergenic | 25.0% |
| ! | AAAATTTGCAGGAGTAAATA+TGG | - | chr5.1:3462691-3462710 | None:intergenic | 25.0% |
| ! | AACTACCCCTTAAAAAAAAA+AGG | + | chr5.1:3461739-3461758 | MS.gene22341:intron | 25.0% |
| ! | ATCAGATCATATAAACAAGT+TGG | - | chr5.1:3463086-3463105 | None:intergenic | 25.0% |
| ! | ATTATGTATGCAAATTGGTT+AGG | + | chr5.1:3465148-3465167 | MS.gene22341:intron | 25.0% |
| ! | ATTCAACAATTACAAAACCA+TGG | - | chr5.1:3464801-3464820 | None:intergenic | 25.0% |
| ! | ATTGATATTACTGTTTGCTT+TGG | + | chr5.1:3464345-3464364 | MS.gene22341:intron | 25.0% |
| ! | ATTGCAATGAACAACATTAA+TGG | - | chr5.1:3464861-3464880 | None:intergenic | 25.0% |
| ! | TAAAGATCAAAGATATGCAT+TGG | - | chr5.1:3461491-3461510 | None:intergenic | 25.0% |
| ! | TATATCACTCTTAATATACC+TGG | + | chr5.1:3464141-3464160 | MS.gene22341:intron | 25.0% |
| ! | TCAACTAAGTCATCTAATAT+GGG | - | chr5.1:3461454-3461473 | None:intergenic | 25.0% |
| ! | TCAGAACTACAATAATCTAA+TGG | - | chr5.1:3465084-3465103 | None:intergenic | 25.0% |
| ! | TGAAACTAGACAATCTTAAA+TGG | + | chr5.1:3465319-3465338 | MS.gene22341:intron | 25.0% |
| ! | TGAATATAGACTGAAATTAC+TGG | + | chr5.1:3463909-3463928 | MS.gene22341:intron | 25.0% |
| ! | TGTTAATGTACTTAAGAGTT+AGG | - | chr5.1:3464180-3464199 | None:intergenic | 25.0% |
| ! | TTCAAAAGAAATAGACAAAC+TGG | - | chr5.1:3463873-3463892 | None:intergenic | 25.0% |
| ! | TTGAATCAAATTAGTGAATC+TGG | - | chr5.1:3462381-3462400 | None:intergenic | 25.0% |
| ! | TTGCAATGAACAACATTAAT+GGG | - | chr5.1:3464860-3464879 | None:intergenic | 25.0% |
| ! | TTGTGACAATATTTGCAAAA+GGG | + | chr5.1:3464006-3464025 | MS.gene22341:CDS | 25.0% |
| !! | TGACTAGATAATTTTTGTGA+AGG | + | chr5.1:3463155-3463174 | MS.gene22341:intron | 25.0% |
| !!! | AGATAAGCTTTAGACAAATT+AGG | - | chr5.1:3462172-3462191 | None:intergenic | 25.0% |
| !!! | GATAAGCTTTAGACAAATTA+GGG | - | chr5.1:3462171-3462190 | None:intergenic | 25.0% |
| !!! | GTATGATATGTTACTTTTCT+AGG | + | chr5.1:3466099-3466118 | MS.gene22341:intron | 25.0% |
| !!! | TACTTCACTTTTTTACATTG+AGG | + | chr5.1:3465198-3465217 | MS.gene22341:intron | 25.0% |
| !!! | TGGATTCATTTTAAAACTGT+AGG | + | chr5.1:3465252-3465271 | MS.gene22341:intron | 25.0% |
| !!! | TGTTTTAAGGAAATAGTAAC+TGG | - | chr5.1:3463775-3463794 | None:intergenic | 25.0% |
| !!! | TGTTTTGTTCATAAGGAAAA+AGG | - | chr5.1:3464421-3464440 | None:intergenic | 25.0% |
| !!! | TTGTTTTTAGGGTTGTTTTT+GGG | + | chr5.1:3462240-3462259 | MS.gene22341:intron | 25.0% |
| !!! | TTTGTTTTTAGGGTTGTTTT+TGG | + | chr5.1:3462239-3462258 | MS.gene22341:intron | 25.0% |
| AAATATGGTCAAAGTATGTC+AGG | + | chr5.1:3461627-3461646 | MS.gene22341:intron | 30.0% | |
| AACCAAAATTGAAATTCGTC+TGG | + | chr5.1:3464477-3464496 | MS.gene22341:CDS | 30.0% | |
| AAGAAGAAGAAGAAGAAGAA+TGG | + | chr5.1:3461931-3461950 | MS.gene22341:intron | 30.0% | |
| AAGGAAAAAGGTAAGTTACT+TGG | - | chr5.1:3464409-3464428 | None:intergenic | 30.0% | |
| ACATGTCATCTATTAAGAGA+CGG | + | chr5.1:3461670-3461689 | MS.gene22341:intron | 30.0% | |
| ACTTATGACAGACTATGAAA+TGG | - | chr5.1:3463564-3463583 | None:intergenic | 30.0% | |
| AGATCACAAATCAATGGAAT+TGG | - | chr5.1:3463848-3463867 | None:intergenic | 30.0% | |
| ATACAATTGATCACCATACT+TGG | - | chr5.1:3466083-3466102 | None:intergenic | 30.0% | |
| ATCACTCTTATCACACATAT+GGG | - | chr5.1:3463391-3463410 | None:intergenic | 30.0% | |
| CAAAAGCTGAAGCAATTAAT+TGG | + | chr5.1:3464500-3464519 | MS.gene22341:CDS | 30.0% | |
| CAAATTAGGGTTCAATTGAA+TGG | - | chr5.1:3462158-3462177 | None:intergenic | 30.0% | |
| CTCAAATACTTCTTATGCTT+TGG | + | chr5.1:3465818-3465837 | MS.gene22341:intron | 30.0% | |
| GAATCAGTTTAATTGCTGAA+GGG | + | chr5.1:3462528-3462547 | MS.gene22341:intron | 30.0% | |
| GTCAACTAAGTCATCTAATA+TGG | - | chr5.1:3461455-3461474 | None:intergenic | 30.0% | |
| GTTGTGACAATATTTGCAAA+AGG | + | chr5.1:3464005-3464024 | MS.gene22341:CDS | 30.0% | |
| TAGTGCTTTCAATTACAGAA+TGG | + | chr5.1:3464766-3464785 | MS.gene22341:intron | 30.0% | |
| TATTTACCAAAATGCAGATG+AGG | + | chr5.1:3465526-3465545 | MS.gene22341:CDS | 30.0% | |
| TGAATCAGTTTAATTGCTGA+AGG | + | chr5.1:3462527-3462546 | MS.gene22341:intron | 30.0% | |
| TGGTTAAAACAGTACTCAAT+AGG | - | chr5.1:3465348-3465367 | None:intergenic | 30.0% | |
| TTCAGTGTAATCATAACTGT+CGG | - | chr5.1:3464675-3464694 | None:intergenic | 30.0% | |
| TTCCTTAAAACAAACATGCT+TGG | + | chr5.1:3463783-3463802 | MS.gene22341:intron | 30.0% | |
| TTCTGTTAGATGACATGTTT+CGG | + | chr5.1:3463583-3463602 | MS.gene22341:intron | 30.0% | |
| ! | AATTTTCAACTCACGAAGAA+AGG | + | chr5.1:3461902-3461921 | MS.gene22341:intron | 30.0% |
| ! | ACTGGAGATAATTTGTGAAA+AGG | + | chr5.1:3462911-3462930 | MS.gene22341:intron | 30.0% |
| ! | ATTGACTAATTTGCATTTGC+TGG | + | chr5.1:3465941-3465960 | MS.gene22341:intron | 30.0% |
| ! | ATTTTCAACTCACGAAGAAA+GGG | + | chr5.1:3461903-3461922 | MS.gene22341:intron | 30.0% |
| ! | GGATAAAAATGATGGAAAAG+AGG | + | chr5.1:3461030-3461049 | MS.gene22341:CDS | 30.0% |
| ! | TTAGGAAGTTTTCAATATCC+AGG | - | chr5.1:3464162-3464181 | None:intergenic | 30.0% |
| ! | TTGACTAATTTGCATTTGCT+GGG | + | chr5.1:3465942-3465961 | MS.gene22341:intron | 30.0% |
| ! | TTTCTAGGAGAATTGACTAA+GGG | + | chr5.1:3466114-3466133 | MS.gene22341:intron | 30.0% |
| !! | AAGCATAAGAAGTATTTGAG+TGG | - | chr5.1:3465818-3465837 | None:intergenic | 30.0% |
| !! | CTGCATTTTGGTAAATATCA+CGG | - | chr5.1:3465523-3465542 | None:intergenic | 30.0% |
| !! | GTTTTGAGTAAGCTTACTTT+GGG | + | chr5.1:3463687-3463706 | MS.gene22341:intron | 30.0% |
| !! | TGAAGGCACAATTATCTTTT+GGG | - | chr5.1:3464557-3464576 | None:intergenic | 30.0% |
| !! | TGTTTTGAGTAAGCTTACTT+TGG | + | chr5.1:3463686-3463705 | MS.gene22341:intron | 30.0% |
| !! | TTTTCTAGGAGAATTGACTA+AGG | + | chr5.1:3466113-3466132 | MS.gene22341:intron | 30.0% |
| !! | TTTTGAGTAAGCTTACTTTG+GGG | + | chr5.1:3463688-3463707 | MS.gene22341:intron | 30.0% |
| !!! | CACTTTTGAAATACCAAGTA+TGG | + | chr5.1:3466067-3466086 | MS.gene22341:intron | 30.0% |
| !!! | GGAAGTGGATTTTATTTTCT+TGG | + | chr5.1:3465964-3465983 | MS.gene22341:intron | 30.0% |
| !!! | TTCACTTTTTTACATTGAGG+TGG | + | chr5.1:3465201-3465220 | MS.gene22341:intron | 30.0% |
| !!! | TTTTTTACATTGAGGTGGTA+TGG | + | chr5.1:3465206-3465225 | MS.gene22341:intron | 30.0% |
| AAAGTCAAGGACTAAGGATT+GGG | + | chr5.1:3464926-3464945 | MS.gene22341:CDS | 35.0% | |
| AATTACCAACCTCGATTGTT+TGG | + | chr5.1:3464245-3464264 | MS.gene22341:CDS | 35.0% | |
| ACACCTTGAAATTTACTCGT+TGG | + | chr5.1:3462793-3462812 | MS.gene22341:intron | 35.0% | |
| ACCTAATAACGAGAGTGAAA+TGG | - | chr5.1:3465880-3465899 | None:intergenic | 35.0% | |
| AGCAATTAATTGGACATCTC+TGG | + | chr5.1:3464510-3464529 | MS.gene22341:CDS | 35.0% | |
| AGTCCAACGAGTAAATTTCA+AGG | - | chr5.1:3462799-3462818 | None:intergenic | 35.0% | |
| CAAAAGATAATTGTGCCTTC+AGG | + | chr5.1:3464556-3464575 | MS.gene22341:CDS | 35.0% | |
| CATCACTCTTATCACACATA+TGG | - | chr5.1:3463392-3463411 | None:intergenic | 35.0% | |
| CTAAAGCTTATCTTCGCAAA+GGG | + | chr5.1:3462179-3462198 | MS.gene22341:CDS | 35.0% | |
| CTAAGATTGCACTTGAAAAG+GGG | + | chr5.1:3462333-3462352 | MS.gene22341:CDS | 35.0% | |
| CTAAGTCATCTAATATGGGA+CGG | - | chr5.1:3461450-3461469 | None:intergenic | 35.0% | |
| CTGGAAAGATCACAAATCAA+TGG | - | chr5.1:3463854-3463873 | None:intergenic | 35.0% | |
| CTGTAGGACATTGTTAAATG+TGG | + | chr5.1:3465268-3465287 | MS.gene22341:intron | 35.0% | |
| GAAAATGTTGTTGTGGACTT+TGG | + | chr5.1:3464038-3464057 | MS.gene22341:CDS | 35.0% | |
| GAAGAAATAGCAGCAAAAAC+AGG | - | chr5.1:3463487-3463506 | None:intergenic | 35.0% | |
| GAATGAGTAGTGATGAAACT+AGG | + | chr5.1:3462839-3462858 | MS.gene22341:intron | 35.0% | |
| GAGAAAGAAGAAAAGCTTGA+TGG | + | chr5.1:3465473-3465492 | MS.gene22341:CDS | 35.0% | |
| GAGAGACGAAAGTTGTATTT+AGG | + | chr5.1:3465296-3465315 | MS.gene22341:intron | 35.0% | |
| GATATAAGATTGTGCTCGAT+CGG | - | chr5.1:3462092-3462111 | None:intergenic | 35.0% | |
| GCTAAGATTGCACTTGAAAA+GGG | + | chr5.1:3462332-3462351 | MS.gene22341:CDS | 35.0% | |
| GTATGTTAATGTGTTGTGAC+TGG | + | chr5.1:3462490-3462509 | MS.gene22341:intron | 35.0% | |
| TAAGATTGCACTTGAAAAGG+GGG | + | chr5.1:3462334-3462353 | MS.gene22341:CDS | 35.0% | |
| TCAACTGATTGGAAAGAAGT+GGG | + | chr5.1:3465727-3465746 | MS.gene22341:CDS | 35.0% | |
| TCAATAAAACCCTGAAAACC+TGG | - | chr5.1:3462656-3462675 | None:intergenic | 35.0% | |
| TCTGTTAGATGACATGTTTC+GGG | + | chr5.1:3463584-3463603 | MS.gene22341:intron | 35.0% | |
| TGCTAAGATTGCACTTGAAA+AGG | + | chr5.1:3462331-3462350 | MS.gene22341:CDS | 35.0% | |
| TGCTTACTTGTTTATGCGAT+TGG | + | chr5.1:3462878-3462897 | MS.gene22341:intron | 35.0% | |
| TTAGTCCTTGACTTTGATGA+CGG | - | chr5.1:3464921-3464940 | None:intergenic | 35.0% | |
| TTCAACTGATTGGAAAGAAG+TGG | + | chr5.1:3465726-3465745 | MS.gene22341:CDS | 35.0% | |
| TTCAGGTGAGTTCATTACTT+GGG | + | chr5.1:3464573-3464592 | MS.gene22341:intron | 35.0% | |
| TTGCGGTATCAATCTATGAA+GGG | + | chr5.1:3464607-3464626 | MS.gene22341:intron | 35.0% | |
| TTGGAAACACAAACAGTAAC+TGG | + | chr5.1:3464364-3464383 | MS.gene22341:intron | 35.0% | |
| TTTCTGCAGTTCAATCTGAA+AGG | + | chr5.1:3464886-3464905 | MS.gene22341:intron | 35.0% | |
| TTTGCGGTATCAATCTATGA+AGG | + | chr5.1:3464606-3464625 | MS.gene22341:intron | 35.0% | |
| ! | AAAATGAATCCACTTGTTGC+TGG | - | chr5.1:3465244-3465263 | None:intergenic | 35.0% |
| ! | AGTCTAATGAGCGAATTTTG+AGG | - | chr5.1:3463030-3463049 | None:intergenic | 35.0% |
| ! | CTTTTCTTCTTTCTCCTGAA+AGG | - | chr5.1:3465468-3465487 | None:intergenic | 35.0% |
| ! | GGAGCTTTTATGAAATCATG+TGG | - | chr5.1:3465063-3465082 | None:intergenic | 35.0% |
| ! | TCTAAAGCTTATCTTCGCAA+AGG | + | chr5.1:3462178-3462197 | MS.gene22341:CDS | 35.0% |
| ! | TGACTAATTTGCATTTGCTG+GGG | + | chr5.1:3465943-3465962 | MS.gene22341:intron | 35.0% |
| ! | TGCATTTGTTTGGGATTCTT+TGG | - | chr5.1:3463421-3463440 | None:intergenic | 35.0% |
| ! | TGCCAGACGAATTTCAATTT+TGG | - | chr5.1:3464482-3464501 | None:intergenic | 35.0% |
| ! | TTAGTGAATCTGGAATCATC+AGG | - | chr5.1:3462371-3462390 | None:intergenic | 35.0% |
| ! | TTGCAGTTTCGAGGTTTTTA+GGG | + | chr5.1:3462616-3462635 | MS.gene22341:intron | 35.0% |
| ! | TTGTGACTGGTTAGTGAAAT+TGG | + | chr5.1:3462503-3462522 | MS.gene22341:intron | 35.0% |
| !! | AAATTACTGGCTCAATGTTC+TGG | + | chr5.1:3463922-3463941 | MS.gene22341:intron | 35.0% |
| !! | AAGTTTTTAAGGGAGACTGA+AGG | + | chr5.1:3463730-3463749 | MS.gene22341:intron | 35.0% |
| !! | AGCTGTTTCTGATGCTAATA+AGG | + | chr5.1:3462132-3462151 | MS.gene22341:intron | 35.0% |
| !! | AGTTTTTAAGGGAGACTGAA+GGG | + | chr5.1:3463731-3463750 | MS.gene22341:intron | 35.0% |
| !! | CTGAAGGCACAATTATCTTT+TGG | - | chr5.1:3464558-3464577 | None:intergenic | 35.0% |
| !! | GAAGGCACAATTATCTTTTG+GGG | - | chr5.1:3464556-3464575 | None:intergenic | 35.0% |
| !! | TTGATTGATGATGTTTGAGC+AGG | + | chr5.1:3463952-3463971 | MS.gene22341:intron | 35.0% |
| !!! | AGCCAAGCATGTTTGTTTTA+AGG | - | chr5.1:3463788-3463807 | None:intergenic | 35.0% |
| !!! | CTTGGGTAGTTTTTAGTTTG+CGG | + | chr5.1:3464590-3464609 | MS.gene22341:intron | 35.0% |
| !!! | GTTTATGCGATTGGTTTTCA+GGG | + | chr5.1:3462887-3462906 | MS.gene22341:intron | 35.0% |
| !!! | TGTTTATGCGATTGGTTTTC+AGG | + | chr5.1:3462886-3462905 | MS.gene22341:intron | 35.0% |
| AAAATGCAGATGAGGACATG+AGG | + | chr5.1:3465534-3465553 | MS.gene22341:CDS | 40.0% | |
| ACCACAACTTTGCACTTATC+AGG | - | chr5.1:3464451-3464470 | None:intergenic | 40.0% | |
| ACCAGCAGAAAATGTTGTTG+TGG | + | chr5.1:3464031-3464050 | MS.gene22341:CDS | 40.0% | |
| ACCTGATAAGTGCAAAGTTG+TGG | + | chr5.1:3464447-3464466 | MS.gene22341:CDS | 40.0% | |
| AGTGTTACCATTGATGTTCC+TGG | + | chr5.1:3464209-3464228 | MS.gene22341:CDS | 40.0% | |
| ATAGAAGGATCTAGAAAGCG+TGG | + | chr5.1:3461790-3461809 | MS.gene22341:intron | 40.0% | |
| ATTGTCACAACCACTTCTTC+TGG | - | chr5.1:3463996-3464015 | None:intergenic | 40.0% | |
| CAAAGTCAAGGACTAAGGAT+TGG | + | chr5.1:3464925-3464944 | MS.gene22341:CDS | 40.0% | |
| CAAGTAATGAACTCACCTGA+AGG | - | chr5.1:3464574-3464593 | None:intergenic | 40.0% | |
| CATATCCGTCATCAAAGTCA+AGG | + | chr5.1:3464913-3464932 | MS.gene22341:CDS | 40.0% | |
| CATGCTTGGCTACAATTTGT+TGG | + | chr5.1:3463797-3463816 | MS.gene22341:intron | 40.0% | |
| CTTCAGGTGAGTTCATTACT+TGG | + | chr5.1:3464572-3464591 | MS.gene22341:intron | 40.0% | |
| GAAAGAAGTGGGATCAAAGA+AGG | + | chr5.1:3465738-3465757 | MS.gene22341:CDS | 40.0% | |
| GAACAGTGCTTTCAACTGAT+TGG | + | chr5.1:3465716-3465735 | MS.gene22341:CDS | 40.0% | |
| GACTAAGGATTGGGATAAGT+TGG | + | chr5.1:3464935-3464954 | MS.gene22341:CDS | 40.0% | |
| GCCATTTCACTCTCGTTATT+AGG | + | chr5.1:3465876-3465895 | MS.gene22341:intron | 40.0% | |
| GGAAGCTGAAGTGAAAAAAG+AGG | + | chr5.1:3464956-3464975 | MS.gene22341:CDS | 40.0% | |
| GGGGGAAAATCAAATAGCAT+CGG | - | chr5.1:3464086-3464105 | None:intergenic | 40.0% | |
| GTAATCATAACTGTCGGTGT+CGG | - | chr5.1:3464669-3464688 | None:intergenic | 40.0% | |
| GTCATCAAAGTCAAGGACTA+AGG | + | chr5.1:3464920-3464939 | MS.gene22341:CDS | 40.0% | |
| GTCATCTATTAAGAGACGGA+GGG | + | chr5.1:3461674-3461693 | MS.gene22341:intron | 40.0% | |
| GTTACCTTTCCAAACAATCG+AGG | - | chr5.1:3464257-3464276 | None:intergenic | 40.0% | |
| TGCGGTATCAATCTATGAAG+GGG | + | chr5.1:3464608-3464627 | MS.gene22341:intron | 40.0% | |
| TGGTGCAACTGCATTTGTTT+GGG | - | chr5.1:3463430-3463449 | None:intergenic | 40.0% | |
| TGTCATCTATTAAGAGACGG+AGG | + | chr5.1:3461673-3461692 | MS.gene22341:intron | 40.0% | |
| ! | ATTTGGGTTCATTTGGTGGT+AGG | - | chr5.1:3463344-3463363 | None:intergenic | 40.0% |
| ! | GATGATTTGGGTTCATTTGG+TGG | - | chr5.1:3463348-3463367 | None:intergenic | 40.0% |
| ! | GCAGATGATTTGGGTTCATT+TGG | - | chr5.1:3463351-3463370 | None:intergenic | 40.0% |
| ! | GTTGCAGTTTCGAGGTTTTT+AGG | + | chr5.1:3462615-3462634 | MS.gene22341:intron | 40.0% |
| ! | TCATGTCCTCATCTGCATTT+TGG | - | chr5.1:3465535-3465554 | None:intergenic | 40.0% |
| ! | TCCACAACAACATTTTCTGC+TGG | - | chr5.1:3464035-3464054 | None:intergenic | 40.0% |
| ! | TTTGGGTTCATTTGGTGGTA+GGG | - | chr5.1:3463343-3463362 | None:intergenic | 40.0% |
| !! | CAATCGAGGTTGGTAATTGT+AGG | - | chr5.1:3464243-3464262 | None:intergenic | 40.0% |
| !! | GACATCTCTGGAATATAGCA+AGG | + | chr5.1:3464522-3464541 | MS.gene22341:CDS | 40.0% |
| !! | GTTGGTAATTGTAGGCATCT+TGG | - | chr5.1:3464235-3464254 | None:intergenic | 40.0% |
| !! | TTGGCTACAATTTGTTGGTG+TGG | + | chr5.1:3463802-3463821 | MS.gene22341:intron | 40.0% |
| !!! | AACCTGTATTTTGGTCTGAC+TGG | - | chr5.1:3463450-3463469 | None:intergenic | 40.0% |
| !!! | AGGTTTTTAGGGTTTCAGTC+TGG | + | chr5.1:3462627-3462646 | MS.gene22341:intron | 40.0% |
| AACAATGGAGAGCAGGTAAG+GGG | - | chr5.1:3464105-3464124 | None:intergenic | 45.0% | |
| AACAGACGCAGCAGATGATT+TGG | - | chr5.1:3463361-3463380 | None:intergenic | 45.0% | |
| AAGGCATGGAGGTGAAGAAA+TGG | + | chr5.1:3465779-3465798 | MS.gene22341:CDS | 45.0% | |
| ACAGACACAGACACAGACAT+TGG | - | chr5.1:3464744-3464763 | None:intergenic | 45.0% | |
| ACAGACGCAGCAGATGATTT+GGG | - | chr5.1:3463360-3463379 | None:intergenic | 45.0% | |
| AGAACAATGGAGAGCAGGTA+AGG | - | chr5.1:3464107-3464126 | None:intergenic | 45.0% | |
| AGAAGTGGGATCAAAGAAGG+TGG | + | chr5.1:3465741-3465760 | MS.gene22341:CDS | 45.0% | |
| AGGCATGGAGGTGAAGAAAT+GGG | + | chr5.1:3465780-3465799 | MS.gene22341:CDS | 45.0% | |
| AGGGAGACTGAAGGGAAAAA+AGG | + | chr5.1:3463739-3463758 | MS.gene22341:intron | 45.0% | |
| AGTCATCTAATATGGGACGG+AGG | - | chr5.1:3461447-3461466 | None:intergenic | 45.0% | |
| ATCTTGGCCAGGAACATCAA+TGG | - | chr5.1:3464219-3464238 | None:intergenic | 45.0% | |
| CACCAGTCAGACCAAAATAC+AGG | + | chr5.1:3463445-3463464 | MS.gene22341:CDS | 45.0% | |
| CCAACCTCGATTGTTTGGAA+AGG | + | chr5.1:3464250-3464269 | MS.gene22341:CDS | 45.0% | |
| CCTTTCCAAACAATCGAGGT+TGG | - | chr5.1:3464253-3464272 | None:intergenic | 45.0% | |
| CTGGTGCAACTGCATTTGTT+TGG | - | chr5.1:3463431-3463450 | None:intergenic | 45.0% | |
| CTGTTGTAGTTGCAGTTTCG+AGG | + | chr5.1:3462607-3462626 | MS.gene22341:intron | 45.0% | |
| GAACAATGGAGAGCAGGTAA+GGG | - | chr5.1:3464106-3464125 | None:intergenic | 45.0% | |
| GATTCATTGCCAGCAACAAG+TGG | + | chr5.1:3465232-3465251 | MS.gene22341:intron | 45.0% | |
| GGCTTGGGAGTAGAAATCAA+CGG | - | chr5.1:3462035-3462054 | None:intergenic | 45.0% | |
| GGGAGACTGAAGGGAAAAAA+GGG | + | chr5.1:3463740-3463759 | MS.gene22341:intron | 45.0% | |
| GTCATCTAATATGGGACGGA+GGG | - | chr5.1:3461446-3461465 | None:intergenic | 45.0% | |
| TAAGGAGAACAATGGAGAGC+AGG | - | chr5.1:3464112-3464131 | None:intergenic | 45.0% | |
| TAATTGTAGGCATCTTGGCC+AGG | - | chr5.1:3464230-3464249 | None:intergenic | 45.0% | |
| TTACCAGAAGCCAGAAGAAG+TGG | + | chr5.1:3463983-3464002 | MS.gene22341:CDS | 45.0% | |
| ! | ATTTGCATTTGCTGGGGAAG+TGG | + | chr5.1:3465949-3465968 | MS.gene22341:intron | 45.0% |
| !! | GACTTTGATGACGGATATGC+AGG | - | chr5.1:3464912-3464931 | None:intergenic | 45.0% |
| !!! | CAGAATGGTTGCTTTTGCCA+TGG | + | chr5.1:3464781-3464800 | MS.gene22341:intron | 45.0% |
| !! | AAATAAATAAAAACATAAAT+AGG | - | chr5.1:3464996-3465015 | None:intergenic | 5.0% |
| !! | AATAAATAAAAACATAAATA+GGG | - | chr5.1:3464995-3465014 | None:intergenic | 5.0% |
| !!! | ATTTATGTTTTTATTTATTT+AGG | + | chr5.1:3464996-3465015 | MS.gene22341:intron | 5.0% |
| !!! | TTTATGTTTTTATTTATTTA+GGG | + | chr5.1:3464997-3465016 | MS.gene22341:intron | 5.0% |
| !!! | TTTTTGTTTTATTTAAATTT+AGG | + | chr5.1:3462574-3462593 | MS.gene22341:intron | 5.0% |
| ACAATGGAGAGCAGGTAAGG+GGG | - | chr5.1:3464104-3464123 | None:intergenic | 50.0% | |
| ACATCGCAGCTGGAGTCAAA+TGG | + | chr5.1:3465694-3465713 | MS.gene22341:intron | 50.0% | |
| ATCAGGCTCGCATATCATGC+AGG | - | chr5.1:3463278-3463297 | None:intergenic | 50.0% | |
| ATCTATGAAGGGGACACTCC+CGG | + | chr5.1:3464618-3464637 | MS.gene22341:intron | 50.0% | |
| ATTGTGGTGCTCTGCCTTTC+AGG | + | chr5.1:3465451-3465470 | MS.gene22341:intron | 50.0% | |
| GTGGGATCAAAGAAGGTGGA+AGG | + | chr5.1:3465745-3465764 | MS.gene22341:CDS | 50.0% | |
| TGTCAACGCTTCATTGCTGC+TGG | + | chr5.1:3462404-3462423 | MS.gene22341:CDS | 50.0% | |
| TTCTTCACCTCCATGCCTTC+CGG | - | chr5.1:3465778-3465797 | None:intergenic | 50.0% | |
| ! | GGGATCGATTTCGATGGCTT+GGG | - | chr5.1:3462050-3462069 | None:intergenic | 50.0% |
| ! | GTTGGTGGGATCGATTTCGA+TGG | - | chr5.1:3462056-3462075 | None:intergenic | 50.0% |
| ! | TGGGATCGATTTCGATGGCT+TGG | - | chr5.1:3462051-3462070 | None:intergenic | 50.0% |
| !! | ATAACTGTCGGTGTCGGACA+CGG | - | chr5.1:3464663-3464682 | None:intergenic | 50.0% |
| !! | CAACCACTTCTTCTGGCTTC+TGG | - | chr5.1:3463989-3464008 | None:intergenic | 50.0% |
| ACACCGGGACACACCTAATC+CGG | - | chr5.1:3464640-3464659 | None:intergenic | 55.0% | |
| ATCGGCGAAGAGATTGGCGT+TGG | - | chr5.1:3462074-3462093 | None:intergenic | 55.0% | |
| CTGCGATGTCACGCAGTTCA+AGG | - | chr5.1:3465683-3465702 | None:intergenic | 55.0% | |
| GAAGGTGGAAGGAAGTCCTC+CGG | + | chr5.1:3465756-3465775 | MS.gene22341:CDS | 55.0% | |
| TGCTCGATCGGCGAAGAGAT+TGG | - | chr5.1:3462080-3462099 | None:intergenic | 55.0% | |
| ! | AGTCTGGCGTCCAGGTTTTC+AGG | + | chr5.1:3462643-3462662 | MS.gene22341:intron | 55.0% |
| ! | GTCTGGCGTCCAGGTTTTCA+GGG | + | chr5.1:3462644-3462663 | MS.gene22341:intron | 55.0% |
| ! | TTGGTGGTAGGGTGCTCGTA+AGG | - | chr5.1:3463332-3463351 | None:intergenic | 55.0% |
| !! | GCGAAGAGATTGGCGTTGGT+GGG | - | chr5.1:3462070-3462089 | None:intergenic | 55.0% |
| !!! | GCGATTGGTTTTCAGGGCAC+TGG | + | chr5.1:3462893-3462912 | MS.gene22341:intron | 55.0% |
| AGGAAGTCCTCCGGAAGGCA+TGG | + | chr5.1:3465765-3465784 | MS.gene22341:CDS | 60.0% | |
| AGGGTTTCAGTCTGGCGTCC+AGG | + | chr5.1:3462635-3462654 | MS.gene22341:intron | 60.0% | |
| CACCGGGACACACCTAATCC+GGG | - | chr5.1:3464639-3464658 | None:intergenic | 60.0% | |
| GAACTGCGTGACATCGCAGC+TGG | + | chr5.1:3465684-3465703 | MS.gene22341:intron | 60.0% | |
| GAAGGGGACACTCCCGGATT+AGG | + | chr5.1:3464624-3464643 | MS.gene22341:intron | 60.0% | |
| GTGGAAGGAAGTCCTCCGGA+AGG | + | chr5.1:3465760-3465779 | MS.gene22341:CDS | 60.0% | |
| TTCACCTCCATGCCTTCCGG+AGG | - | chr5.1:3465775-3465794 | None:intergenic | 60.0% | |
| ! | AAGTCCTCCGGAAGGCATGG+AGG | + | chr5.1:3465768-3465787 | MS.gene22341:CDS | 60.0% |
| ! | CTCCCGGATTAGGTGTGTCC+CGG | + | chr5.1:3464634-3464653 | MS.gene22341:intron | 60.0% |
| ! | GGCGAAGAGATTGGCGTTGG+TGG | - | chr5.1:3462071-3462090 | None:intergenic | 60.0% |
| !! | TCGGTGTCGGACACGGACAC+CGG | - | chr5.1:3464656-3464675 | None:intergenic | 65.0% |
| ! | CGGTGTCGGACACGGACACC+GGG | - | chr5.1:3464655-3464674 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 3461028 | 3466133 | 3461028 | ID=MS.gene22341 |
| chr5.1 | mRNA | 3461028 | 3466133 | 3461028 | ID=MS.gene22341.t1;Parent=MS.gene22341 |
| chr5.1 | exon | 3461028 | 3461051 | 3461028 | ID=MS.gene22341.t1.exon1;Parent=MS.gene22341.t1 |
| chr5.1 | CDS | 3461028 | 3461051 | 3461028 | ID=cds.MS.gene22341.t1;Parent=MS.gene22341.t1 |
| chr5.1 | exon | 3462154 | 3462200 | 3462154 | ID=MS.gene22341.t1.exon2;Parent=MS.gene22341.t1 |
| chr5.1 | CDS | 3462154 | 3462200 | 3462154 | ID=cds.MS.gene22341.t1;Parent=MS.gene22341.t1 |
| chr5.1 | exon | 3462298 | 3462425 | 3462298 | ID=MS.gene22341.t1.exon3;Parent=MS.gene22341.t1 |
| chr5.1 | CDS | 3462298 | 3462425 | 3462298 | ID=cds.MS.gene22341.t1;Parent=MS.gene22341.t1 |
| chr5.1 | exon | 3463316 | 3463466 | 3463316 | ID=MS.gene22341.t1.exon4;Parent=MS.gene22341.t1 |
| chr5.1 | CDS | 3463316 | 3463466 | 3463316 | ID=cds.MS.gene22341.t1;Parent=MS.gene22341.t1 |
| chr5.1 | exon | 3463974 | 3464070 | 3463974 | ID=MS.gene22341.t1.exon5;Parent=MS.gene22341.t1 |
| chr5.1 | CDS | 3463974 | 3464070 | 3463974 | ID=cds.MS.gene22341.t1;Parent=MS.gene22341.t1 |
| chr5.1 | exon | 3464206 | 3464271 | 3464206 | ID=MS.gene22341.t1.exon6;Parent=MS.gene22341.t1 |
| chr5.1 | CDS | 3464206 | 3464271 | 3464206 | ID=cds.MS.gene22341.t1;Parent=MS.gene22341.t1 |
| chr5.1 | exon | 3464442 | 3464577 | 3464442 | ID=MS.gene22341.t1.exon7;Parent=MS.gene22341.t1 |
| chr5.1 | CDS | 3464442 | 3464577 | 3464442 | ID=cds.MS.gene22341.t1;Parent=MS.gene22341.t1 |
| chr5.1 | exon | 3464895 | 3464977 | 3464895 | ID=MS.gene22341.t1.exon8;Parent=MS.gene22341.t1 |
| chr5.1 | CDS | 3464895 | 3464977 | 3464895 | ID=cds.MS.gene22341.t1;Parent=MS.gene22341.t1 |
| chr5.1 | exon | 3465473 | 3465577 | 3465473 | ID=MS.gene22341.t1.exon9;Parent=MS.gene22341.t1 |
| chr5.1 | CDS | 3465473 | 3465577 | 3465473 | ID=cds.MS.gene22341.t1;Parent=MS.gene22341.t1 |
| chr5.1 | exon | 3465703 | 3465803 | 3465703 | ID=MS.gene22341.t1.exon10;Parent=MS.gene22341.t1 |
| chr5.1 | CDS | 3465703 | 3465803 | 3465703 | ID=cds.MS.gene22341.t1;Parent=MS.gene22341.t1 |
| chr5.1 | exon | 3466121 | 3466133 | 3466121 | ID=MS.gene22341.t1.exon11;Parent=MS.gene22341.t1 |
| chr5.1 | CDS | 3466121 | 3466133 | 3466121 | ID=cds.MS.gene22341.t1;Parent=MS.gene22341.t1 |
| Gene Sequence |
| Protein sequence |
