AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene81612

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene81612.t1 MTR_5g085690 96.451 789 28 0 1 789 1 789 0.0 1583
MS.gene81612.t1 MTR_7g081420 60.179 781 291 13 13 788 19 784 0.0 885
MS.gene81612.t1 MTR_7g081750 58.036 784 304 10 21 788 23 797 0.0 881
MS.gene81612.t1 MTR_7g081500 59.415 786 301 12 8 788 10 782 0.0 864
MS.gene81612.t1 MTR_7g081580 57.727 783 306 15 13 788 19 783 0.0 845
MS.gene81612.t1 MTR_7g081380 58.312 794 292 16 22 788 25 806 0.0 831
MS.gene81612.t1 MTR_7g481600 57.727 783 306 15 13 788 19 783 0.0 825
MS.gene81612.t1 MTR_3g061110 53.924 790 324 10 1 788 1 752 0.0 821
MS.gene81612.t1 MTR_5g096750 55.267 769 307 13 25 788 28 764 0.0 817
MS.gene81612.t1 MTR_4g103400 52.207 793 340 15 10 788 9 776 0.0 786
MS.gene81612.t1 MTR_4g103490 52.351 787 329 15 21 788 24 783 0.0 762
MS.gene81612.t1 MTR_4g103480 52.461 772 337 13 23 788 39 786 0.0 756
MS.gene81612.t1 MTR_4g103450 52.611 766 333 13 29 788 2 743 0.0 750
MS.gene81612.t1 MTR_3g082200 51.499 767 340 12 28 788 29 769 0.0 749
MS.gene81612.t1 MTR_4g134320 49.501 802 354 15 1 788 1 765 0.0 736
MS.gene81612.t1 MTR_4g103430 51.305 766 326 15 37 788 36 768 0.0 735
MS.gene81612.t1 MTR_4g103495 52.500 720 319 11 23 739 23 722 0.0 711
MS.gene81612.t1 MTR_7g098070 49.161 775 355 14 21 788 19 761 0.0 709
MS.gene81612.t1 MTR_3g082200 51.190 672 297 11 122 788 1 646 0.0 650
MS.gene81612.t1 MTR_3g082200 51.094 640 283 10 153 788 18 631 0.0 622
MS.gene81612.t1 MTR_4g103495 50.625 640 293 11 153 788 3 623 0.0 598
MS.gene81612.t1 MTR_5g055920 49.150 647 302 11 147 788 42 666 0.0 582
MS.gene81612.t1 MTR_4g073540 42.355 739 375 18 70 788 60 767 0.0 554
MS.gene81612.t1 MTR_5g016120 41.272 802 413 21 1 787 1 759 0.0 540
MS.gene81612.t1 MTR_4g095360 39.898 787 416 20 13 788 14 754 1.88e-180 536
MS.gene81612.t1 MTR_1g102350 40.250 800 431 20 1 788 12 776 7.39e-177 527
MS.gene81612.t1 MTR_0047s0120 40.527 797 415 20 4 786 3 754 5.65e-175 522
MS.gene81612.t1 MTR_4g053630 42.179 780 376 24 30 788 4 729 6.14e-175 521
MS.gene81612.t1 MTR_3g102810 39.719 783 409 21 21 786 16 752 6.00e-174 519
MS.gene81612.t1 MTR_2g042130 39.088 811 414 25 10 786 6 770 7.77e-171 512
MS.gene81612.t1 MTR_8g072440 40.722 776 389 23 28 788 33 752 9.77e-167 500
MS.gene81612.t1 MTR_8g072440 41.036 753 380 21 50 788 8 710 5.65e-166 497
MS.gene81612.t1 MTR_1g018510 38.748 751 406 18 55 786 8 723 6.20e-165 495
MS.gene81612.t1 MTR_7g075900 40.771 726 386 20 73 788 80 771 7.82e-165 496
MS.gene81612.t1 MTR_5g025010 40.283 777 394 24 28 788 27 749 1.53e-164 495
MS.gene81612.t1 MTR_5g025010 40.156 767 391 23 38 788 3 717 1.03e-161 486
MS.gene81612.t1 MTR_2g018135 39.649 797 405 23 28 788 26 782 2.29e-160 485
MS.gene81612.t1 MTR_8g042670 38.601 772 426 16 23 788 28 757 2.34e-159 481
MS.gene81612.t1 MTR_8g033150 38.672 768 400 23 30 788 19 724 1.81e-158 478
MS.gene81612.t1 MTR_7g098630 38.194 775 426 18 29 789 26 761 3.12e-158 482
MS.gene81612.t1 MTR_8g033150 38.672 768 400 23 30 788 46 751 3.74e-158 478
MS.gene81612.t1 MTR_2g018125 39.371 795 410 20 28 788 27 783 6.99e-158 479
MS.gene81612.t1 MTR_3g104930 39.249 772 412 20 28 788 36 761 1.14e-157 477
MS.gene81612.t1 MTR_8g079900 38.452 775 397 23 27 788 34 741 2.79e-157 476
MS.gene81612.t1 MTR_4g125180 38.161 794 420 25 8 786 12 749 3.81e-157 476
MS.gene81612.t1 MTR_8g022870 38.205 780 433 19 27 788 27 775 3.73e-156 474
MS.gene81612.t1 MTR_4g053635 41.185 726 349 23 87 788 1 672 2.82e-154 466
MS.gene81612.t1 MTR_8g083220 38.946 778 409 22 30 788 44 774 9.81e-154 468
MS.gene81612.t1 MTR_4g053630 42.407 698 333 22 112 788 3 652 1.20e-153 463
MS.gene81612.t1 MTR_3g114420 38.018 797 435 18 8 788 11 764 8.75e-153 465
MS.gene81612.t1 MTR_8g042710 36.909 783 437 18 24 788 20 763 9.97e-152 462
MS.gene81612.t1 MTR_8g021130 39.048 735 392 22 72 786 74 772 1.79e-151 462
MS.gene81612.t1 MTR_6g055570 37.469 806 404 26 3 788 4 729 5.98e-146 446
MS.gene81612.t1 MTR_1g007030 36.205 801 422 24 1 788 8 732 1.06e-145 446
MS.gene81612.t1 MTR_7g075890 37.176 772 405 23 30 788 193 897 2.51e-144 447
MS.gene81612.t1 MTR_6g055410 36.704 801 399 26 3 788 4 711 2.52e-144 441
MS.gene81612.t1 MTR_1g048110 35.616 803 422 24 1 788 8 730 3.19e-144 442
MS.gene81612.t1 MTR_7g034380 37.517 749 386 23 52 788 13 691 8.48e-144 439
MS.gene81612.t1 MTR_1g006990 36.136 797 416 23 8 788 15 734 1.44e-143 440
MS.gene81612.t1 MTR_8g006680 37.564 780 394 27 20 788 25 722 4.92e-143 438
MS.gene81612.t1 MTR_8g005300 37.564 780 394 27 20 788 25 722 4.92e-143 438
MS.gene81612.t1 MTR_8g005640 37.564 780 394 27 20 788 25 722 4.92e-143 438
MS.gene81612.t1 MTR_7g104200 36.445 782 409 21 27 789 30 742 2.74e-141 434
MS.gene81612.t1 MTR_1g078110 36.606 825 414 24 1 788 1 753 2.36e-140 432
MS.gene81612.t1 MTR_8g024380 39.378 739 367 21 73 788 78 758 8.25e-140 431
MS.gene81612.t1 MTR_8g079900 38.429 700 358 20 102 788 4 643 1.15e-138 424
MS.gene81612.t1 MTR_3g010080 36.453 812 396 28 8 788 9 731 1.51e-138 427
MS.gene81612.t1 MTR_8g005710 36.751 751 396 24 52 788 13 698 2.11e-138 426
MS.gene81612.t1 MTR_3g464790 38.161 794 403 22 9 788 12 731 4.44e-138 426
MS.gene81612.t1 MTR_4g102400 37.484 771 416 22 28 788 38 752 4.20e-137 424
MS.gene81612.t1 MTR_8g024390 38.881 733 385 22 73 788 71 757 2.06e-136 422
MS.gene81612.t1 MTR_8g024420 38.011 734 388 19 73 788 37 721 3.79e-136 421
MS.gene81612.t1 MTR_8g042670 38.735 648 356 14 147 788 21 633 1.68e-131 405
MS.gene81612.t1 MTR_1g079120 35.600 809 445 25 1 788 7 760 2.61e-129 404
MS.gene81612.t1 MTR_2g049200 38.199 733 388 17 73 788 71 755 3.16e-129 403
MS.gene81612.t1 MTR_5g011340 36.149 805 443 17 1 789 2 751 1.07e-128 402
MS.gene81612.t1 MTR_7g079300 35.464 798 430 27 22 788 22 765 4.81e-128 400
MS.gene81612.t1 MTR_5g011190 35.849 795 434 19 13 789 18 754 1.42e-127 399
MS.gene81612.t1 MTR_7g118080 37.313 737 383 22 73 788 77 755 3.49e-126 395
MS.gene81612.t1 MTR_3g114410 40.589 611 316 15 8 612 11 580 7.03e-126 389
MS.gene81612.t1 MTR_5g011370 35.597 795 436 18 13 789 38 774 1.21e-125 394
MS.gene81612.t1 MTR_5g011310 36.066 793 435 19 13 789 18 754 4.81e-125 392
MS.gene81612.t1 MTR_8g024370 36.595 746 415 18 59 788 53 756 4.99e-125 392
MS.gene81612.t1 MTR_5g011320 36.020 794 430 20 13 789 14 746 7.09e-124 389
MS.gene81612.t1 MTR_2g044630 34.586 798 405 27 5 788 11 705 3.72e-123 386
MS.gene81612.t1 MTR_7g079310 34.957 821 426 30 8 788 11 763 6.02e-123 387
MS.gene81612.t1 MTR_5g011270 36.375 767 420 17 29 789 48 752 1.52e-121 383
MS.gene81612.t1 MTR_5g011260 35.770 766 426 16 29 789 48 752 1.39e-120 380
MS.gene81612.t1 MTR_5g011280 35.779 777 432 20 20 789 40 756 3.47e-118 374
MS.gene81612.t1 MTR_8g042710 36.535 635 346 16 24 641 20 614 7.85e-113 358
MS.gene81612.t1 MTR_2g042640 35.598 677 322 19 77 750 46 611 1.21e-107 342
MS.gene81612.t1 MTR_4g071560 38.907 604 278 14 47 635 10 537 1.68e-107 340
MS.gene81612.t1 MTR_3g452290 34.732 691 321 23 102 788 4 568 4.17e-104 332
MS.gene81612.t1 MTR_3g451220 34.732 691 321 23 102 788 4 568 4.17e-104 332
MS.gene81612.t1 MTR_6g075370 32.720 761 374 22 10 753 15 654 1.69e-103 333
MS.gene81612.t1 MTR_4g127480 34.447 778 427 32 55 787 73 812 7.88e-100 327
MS.gene81612.t1 MTR_2g037850 34.450 746 411 29 55 757 73 783 2.64e-95 315
MS.gene81612.t1 MTR_2g046740 32.005 778 460 27 52 789 91 839 1.65e-82 281
MS.gene81612.t1 MTR_8g089230 31.660 777 457 30 55 789 102 846 1.41e-79 273
MS.gene81612.t1 MTR_2g042650 35.922 515 255 14 289 788 188 642 2.08e-79 268
MS.gene81612.t1 MTR_4g132620 31.195 795 460 28 8 750 19 778 6.26e-79 271
MS.gene81612.t1 MTR_8g027260 40.306 392 191 14 5 394 12 362 5.20e-75 256
MS.gene81612.t1 MTR_8g027260 41.304 276 148 5 519 788 384 651 6.92e-62 221
MS.gene81612.t1 MTR_5g081100 33.527 516 250 13 28 541 2 426 2.65e-71 240
MS.gene81612.t1 MTR_7g079295 37.228 368 186 13 22 371 22 362 1.80e-56 202
MS.gene81612.t1 MTR_7g079295 37.333 150 84 7 646 788 363 509 1.29e-14 77.8
MS.gene81612.t1 MTR_3g114160 35.661 401 186 11 65 461 2 334 9.74e-53 188
MS.gene81612.t1 MTR_5g081280 37.391 345 152 13 26 367 18 301 7.71e-52 183
MS.gene81612.t1 MTR_7g081660 52.778 180 82 3 611 788 374 552 4.36e-43 165
MS.gene81612.t1 MTR_3g114140 39.200 250 139 6 506 746 176 421 2.48e-42 160
MS.gene81612.t1 MTR_3g114140 43.949 157 58 1 220 376 28 154 1.86e-27 116
MS.gene81612.t1 MTR_8g092940 38.397 237 112 8 71 305 26 230 4.62e-37 139
MS.gene81612.t1 MTR_2g070260 38.235 204 111 6 581 778 1 195 1.82e-35 134
MS.gene81612.t1 MTR_2g070250 42.328 189 85 5 165 353 101 265 3.01e-33 133
MS.gene81612.t1 MTR_5g044060 50.746 134 64 1 509 640 1 134 4.50e-31 120
MS.gene81612.t1 MTR_4g053665 34.902 255 115 9 540 788 1 210 7.09e-29 115
MS.gene81612.t1 MTR_4g126230 33.663 202 121 3 521 717 55 248 2.79e-28 114
MS.gene81612.t1 MTR_5g081130 32.727 165 102 5 631 789 12 173 3.14e-17 81.3
MS.gene81612.t1 MTR_5g011300 50.000 84 42 0 581 664 1 84 1.54e-16 76.3
MS.gene81612.t1 MTR_5g079315 50.000 74 36 1 288 360 1 74 1.27e-13 67.0
MS.gene81612.t1 MTR_3g005755 43.529 85 46 2 559 641 224 308 9.19e-13 70.5
MS.gene81612.t1 MTR_3g083490 56.452 62 25 1 311 370 16 77 7.14e-12 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene81612.t1 AT2G04160 51.309 764 344 11 29 788 31 770 0.0 764
MS.gene81612.t1 AT5G59810 50.845 769 342 11 25 788 37 774 0.0 736
MS.gene81612.t1 AT5G67360 41.310 794 408 22 9 788 5 754 0.0 546
MS.gene81612.t1 AT4G34980 38.710 806 419 23 5 788 6 758 6.55e-174 519
MS.gene81612.t1 AT2G05920 40.434 784 397 23 18 786 19 747 5.69e-172 514
MS.gene81612.t1 AT5G45650 39.750 800 409 21 27 788 24 788 8.53e-167 502
MS.gene81612.t1 AT5G45650 39.750 800 409 21 27 788 24 788 8.53e-167 502
MS.gene81612.t1 AT5G51750 38.979 803 438 20 4 788 6 774 1.55e-166 501
MS.gene81612.t1 AT3G14240 38.144 776 431 20 29 788 27 769 4.21e-163 492
MS.gene81612.t1 AT3G14067 37.935 804 430 27 8 788 10 767 1.40e-160 485
MS.gene81612.t1 AT1G20160 38.053 791 431 18 13 788 15 761 4.00e-159 481
MS.gene81612.t1 AT1G20160 39.615 727 396 15 73 788 28 722 5.99e-158 477
MS.gene81612.t1 AT1G20150 39.409 779 411 23 30 788 33 770 6.94e-155 471
MS.gene81612.t1 AT5G59100 38.734 790 382 26 21 788 28 737 2.51e-154 468
MS.gene81612.t1 AT4G10520 38.250 800 418 23 6 788 4 744 2.01e-153 466
MS.gene81612.t1 AT5G59120 39.069 773 386 23 27 788 29 727 4.90e-153 464
MS.gene81612.t1 AT1G01900 39.781 729 390 17 73 788 79 771 5.24e-153 466
MS.gene81612.t1 AT5G58830 37.437 796 377 24 8 788 16 705 1.45e-151 460
MS.gene81612.t1 AT5G59090 38.501 774 395 24 24 788 27 728 5.96e-151 459
MS.gene81612.t1 AT4G10550 38.261 805 431 24 3 788 9 766 8.08e-151 460
MS.gene81612.t1 AT4G10550 38.636 792 418 25 17 788 39 782 2.78e-150 459
MS.gene81612.t1 AT5G59090 38.501 774 393 25 24 788 27 726 1.22e-149 456
MS.gene81612.t1 AT5G59090 38.163 773 394 23 24 788 27 723 1.73e-149 455
MS.gene81612.t1 AT1G32940 38.284 781 416 23 28 788 28 762 2.40e-148 454
MS.gene81612.t1 AT4G26330 39.973 743 395 18 65 789 13 722 5.53e-148 451
MS.gene81612.t1 AT5G59130 37.406 794 410 24 2 788 12 725 1.08e-147 451
MS.gene81612.t1 AT5G03620 38.282 815 408 27 7 789 8 759 1.19e-147 451
MS.gene81612.t1 AT1G04110 35.945 804 456 18 7 788 4 770 3.28e-147 451
MS.gene81612.t1 AT5G59190 38.959 711 359 19 55 757 15 658 6.21e-147 447
MS.gene81612.t1 AT5G59130 37.154 794 402 24 2 788 12 715 2.71e-146 447
MS.gene81612.t1 AT1G32950 37.707 785 430 21 20 788 20 761 3.62e-146 448
MS.gene81612.t1 AT5G59130 37.406 794 406 25 2 788 12 721 6.97e-146 446
MS.gene81612.t1 AT4G00230 38.622 769 399 22 30 788 38 743 1.01e-145 446
MS.gene81612.t1 AT3G46840 37.563 796 422 25 1 788 6 734 1.19e-145 446
MS.gene81612.t1 AT1G32960 36.889 778 431 20 28 788 31 765 3.21e-145 446
MS.gene81612.t1 AT5G59130 38.283 734 374 20 66 788 21 686 1.25e-144 441
MS.gene81612.t1 AT3G46850 38.372 774 401 25 24 788 28 734 2.45e-144 442
MS.gene81612.t1 AT4G26330 39.234 757 395 19 65 789 13 736 2.83e-144 442
MS.gene81612.t1 AT5G58840 36.444 793 405 19 2 788 7 706 4.38e-143 438
MS.gene81612.t1 AT1G32940 38.216 751 404 22 58 788 1 711 8.83e-142 435
MS.gene81612.t1 AT1G32940 38.216 751 404 22 58 788 1 711 8.83e-142 435
MS.gene81612.t1 AT4G10550 38.349 751 402 23 58 788 1 710 1.21e-141 434
MS.gene81612.t1 AT4G10550 38.349 751 402 23 58 788 1 710 1.21e-141 434
MS.gene81612.t1 AT5G58820 37.500 776 369 21 27 788 27 700 1.88e-141 433
MS.gene81612.t1 AT1G66210 36.468 787 417 22 19 788 30 750 7.46e-140 431
MS.gene81612.t1 AT1G32950 37.885 747 411 20 58 788 1 710 2.55e-139 429
MS.gene81612.t1 AT4G21630 36.855 814 416 24 6 788 7 753 2.83e-138 427
MS.gene81612.t1 AT4G10510 36.468 787 442 20 17 788 22 765 3.07e-138 427
MS.gene81612.t1 AT4G10540 35.875 800 431 21 17 788 18 763 3.52e-138 427
MS.gene81612.t1 AT4G10530 36.160 802 431 22 1 788 1 735 3.68e-138 426
MS.gene81612.t1 AT4G10510 36.563 774 433 20 30 788 23 753 3.59e-137 424
MS.gene81612.t1 AT5G11940 36.282 780 415 22 28 788 36 752 1.18e-136 423
MS.gene81612.t1 AT5G45640 37.022 759 382 20 81 788 38 751 1.03e-131 410
MS.gene81612.t1 AT4G10510 36.327 746 423 19 58 788 1 709 8.43e-131 406
MS.gene81612.t1 AT1G66220 36.143 783 408 22 26 788 34 744 4.13e-130 405
MS.gene81612.t1 AT4G10510 36.115 731 415 19 73 788 1 694 4.10e-126 394
MS.gene81612.t1 AT5G03620 39.936 621 305 18 7 612 8 575 8.74e-122 378
MS.gene81612.t1 AT1G32970 34.981 789 422 27 15 788 10 722 9.20e-120 378
MS.gene81612.t1 AT1G32940 39.448 616 320 17 28 630 28 603 2.09e-119 373
MS.gene81612.t1 AT4G15040 35.215 744 398 23 55 788 16 685 1.35e-117 371
MS.gene81612.t1 AT4G15040 35.215 744 398 23 55 788 16 685 1.35e-117 371
MS.gene81612.t1 AT4G21323 35.197 787 404 24 30 786 81 791 1.47e-117 374
MS.gene81612.t1 AT4G00230 40.136 588 296 15 30 615 38 571 1.83e-114 360
MS.gene81612.t1 AT4G21326 32.710 749 424 20 58 788 1 687 2.82e-111 354
MS.gene81612.t1 AT5G67090 34.730 740 370 26 70 777 57 715 3.11e-110 353
MS.gene81612.t1 AT5G58840 37.242 631 289 16 2 623 7 539 2.81e-109 345
MS.gene81612.t1 AT1G30600 32.822 783 441 28 55 789 82 827 6.39e-98 323
MS.gene81612.t1 AT4G30020 32.826 789 429 32 56 789 70 812 1.09e-96 319
MS.gene81612.t1 AT4G30020 32.826 789 429 32 56 789 70 812 1.09e-96 319
MS.gene81612.t1 AT4G30020 32.826 789 429 32 56 789 70 812 1.09e-96 319
MS.gene81612.t1 AT4G30020 32.826 789 429 32 56 789 70 812 1.09e-96 319
MS.gene81612.t1 AT2G19170 33.078 783 434 35 56 789 70 811 3.76e-96 318
MS.gene81612.t1 AT2G19170 33.078 783 434 35 56 789 70 811 3.76e-96 318
MS.gene81612.t1 AT1G20160 36.636 535 292 12 13 541 15 508 6.94e-90 294
MS.gene81612.t1 AT4G20430 31.375 749 443 25 53 759 101 820 6.73e-89 299
MS.gene81612.t1 AT4G20430 31.375 749 443 25 53 759 101 820 6.73e-89 299
MS.gene81612.t1 AT4G20430 31.301 738 434 23 53 759 101 796 5.16e-87 293
MS.gene81612.t1 AT5G44530 31.105 778 462 27 54 789 89 834 1.73e-84 286
MS.gene81612.t1 AT2G39850 30.277 829 421 38 27 788 27 765 5.25e-84 284
MS.gene81612.t1 AT4G21650 42.857 378 185 11 24 383 36 400 6.39e-81 275
MS.gene81612.t1 AT4G21650 39.661 295 158 10 502 788 478 760 1.03e-46 179
MS.gene81612.t1 AT1G62340 31.744 734 427 26 55 743 82 786 1.80e-80 276
MS.gene81612.t1 AT5G44530 30.100 804 463 28 53 789 88 859 1.00e-79 274
MS.gene81612.t1 AT4G21640 41.282 390 195 12 8 380 20 392 1.72e-78 268
MS.gene81612.t1 AT4G21640 41.216 296 152 9 502 788 445 727 3.52e-50 189
MS.gene81612.t1 AT5G58840 34.426 549 256 15 2 541 7 460 7.61e-75 251
MS.gene81612.t1 AT5G44530 31.423 541 318 19 52 562 87 604 4.91e-54 198
MS.gene81612.t1 AT1G32980 41.053 190 107 4 575 760 1 189 1.13e-35 134
MS.gene81612.t1 AT5G59110 36.646 161 93 6 636 788 7 166 4.38e-24 100

Find 174 sgRNAs with CRISPR-Local

Find 282 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCAAGTTCATTGACATTTA+AGG 0.106897 5.1:-67617253 MS.gene81612:CDS
TCAACAACTTGAAGAATTTA+AGG 0.116991 5.1:-67617286 MS.gene81612:CDS
GGCTTTGAAGCTGCTCTTGC+AGG 0.124349 5.1:-67618971 MS.gene81612:CDS
TCACCTGATGTAACAATATT+TGG 0.131894 5.1:-67619783 MS.gene81612:CDS
TCATTGACATTTAAGGAAAT+TGG 0.202709 5.1:-67617246 MS.gene81612:CDS
CTCACAGCACGTGACTTTAT+TGG 0.216825 5.1:-67619846 MS.gene81612:CDS
AGCACATGCTTACCTTTCTA+AGG 0.225071 5.1:+67621887 None:intergenic
GATTTACTTGCTTCAATCTT+AGG 0.232077 5.1:-67621673 MS.gene81612:CDS
CCTCATGTTGCTGGCATTGC+TGG 0.232103 5.1:-67617905 MS.gene81612:CDS
TTGTATACCTTGAGTATTAA+TGG 0.240342 5.1:+67618541 None:intergenic
TATATTATAATGCAGGAAAA+TGG 0.251364 5.1:-67618656 MS.gene81612:intron
TCCTTTACCTGGTGCAAGTA+TGG 0.254370 5.1:-67618885 MS.gene81612:CDS
TGATGTGATTTCAACTTCTT+TGG 0.256845 5.1:-67619619 MS.gene81612:CDS
GTAAACAAAGCTTCAATATA+TGG 0.264926 5.1:+67619585 None:intergenic
GATGAAAACCCAGCCATAAT+TGG 0.268338 5.1:+67618586 None:intergenic
ATCATTGCTAATTTAGATTC+AGG 0.275726 5.1:-67621236 MS.gene81612:intron
CTTTGACCAACATACTTTGT+AGG 0.283223 5.1:+67619710 None:intergenic
CATATTGTGATTCGTAGTTT+TGG 0.287628 5.1:+67619889 None:intergenic
ACAAATTATAGAAAACTAAT+TGG 0.289969 5.1:-67619927 MS.gene81612:intron
CTTGATCCTACCAAAGTAAA+AGG 0.293474 5.1:-67619043 MS.gene81612:CDS
TCTTACAATAAGCATATAAA+TGG 0.304355 5.1:-67621539 MS.gene81612:CDS
AGTTTCAGTGGCATTGGATA+TGG 0.305789 5.1:-67620964 MS.gene81612:CDS
ATTAAAGCCATCTCCAATTA+TGG 0.319155 5.1:-67618599 MS.gene81612:CDS
TTTACTGATGGAATTTCAAT+TGG 0.333362 5.1:-67619567 MS.gene81612:CDS
ATGTCTTGTCCTCATGTTGC+TGG 0.337178 5.1:-67617914 MS.gene81612:CDS
AGATCATCAAGGGAGGGATT+TGG 0.343007 5.1:+67621721 None:intergenic
TTTGTCAGCCATATTTCTAT+TGG 0.347963 5.1:-67619414 MS.gene81612:CDS
ATAGCGACTCCATTTGAATA+TGG 0.349781 5.1:-67617579 MS.gene81612:CDS
CAAGTCAATTTCCCAAATAC+TGG 0.351450 5.1:+67617165 None:intergenic
CAGATAATTCTAGAGGCAAT+AGG 0.359087 5.1:-67617207 MS.gene81612:CDS
GTTGTGGTTGTTTGTTCTGC+TGG 0.363662 5.1:-67619519 MS.gene81612:CDS
CGGTACGAGTAACGTTTATA+AGG 0.370101 5.1:+67617349 None:intergenic
CATCAAAATGGCGTGGGAAT+GGG 0.373921 5.1:-67620933 MS.gene81612:CDS
ACTCCATTTGAATATGGTTC+TGG 0.377150 5.1:-67617573 MS.gene81612:CDS
TTGCAGCTAGTACAATTGAT+AGG 0.379299 5.1:-67619440 MS.gene81612:CDS
CCACTGAAACTTTCATGTTC+CGG 0.386600 5.1:+67620976 None:intergenic
GAATTTCTCTTGATTCTGCT+TGG 0.392718 5.1:-67621286 MS.gene81612:CDS
GTTCCTTGTTGCAGATTGTA+AGG 0.394947 5.1:+67617941 None:intergenic
GGGAAATTGACTTGGACAAA+TGG 0.397704 5.1:-67617156 MS.gene81612:CDS
ATCGATGAGCGTGAGTGGTT+TGG 0.399495 5.1:-67618842 MS.gene81612:CDS
TGAGCTTACAAGACTACTAT+AGG 0.403036 5.1:+67617114 None:intergenic
CCATCAAAATGGCGTGGGAA+TGG 0.411213 5.1:-67620934 MS.gene81612:CDS
GCTTGGTGGAAGGCAAGATT+TGG 0.411231 5.1:-67621269 MS.gene81612:CDS
GATGTGATTTCAACTTCTTT+GGG 0.412723 5.1:-67619618 MS.gene81612:CDS
GTTTGTTCTGCTGGAAATGA+TGG 0.414989 5.1:-67619510 MS.gene81612:CDS
CTGTTTCCTTTGCCTTCTCA+TGG 0.416029 5.1:+67621570 None:intergenic
TCCTTAAATGTCAATGAACT+TGG 0.416086 5.1:+67617252 None:intergenic
CAAAACTACGAATCACAATA+TGG 0.420918 5.1:-67619888 MS.gene81612:CDS
TTATCGAACGCGTCTCTGAT+TGG 0.421421 5.1:+67617603 None:intergenic
CATGAAAGTTTCAGTGGCAT+TGG 0.431620 5.1:-67620970 MS.gene81612:CDS
TCAAGACACTTCATCCTAGT+TGG 0.433278 5.1:-67617877 MS.gene81612:CDS
CCTAACCTTGCAATGGATCC+AGG 0.444320 5.1:-67617540 MS.gene81612:CDS
TCACGTGCTGTGAGGTTTGA+GGG 0.445205 5.1:+67619855 None:intergenic
CAGTATTTGGGAAATTGACT+TGG 0.447547 5.1:-67617164 MS.gene81612:CDS
ATGGCAGATTTGATAGCAGC+TGG 0.451272 5.1:+67617851 None:intergenic
TTGCAAAATGTTGTATTTGA+AGG 0.451939 5.1:+67620883 None:intergenic
ATTGAAGCTTTGTTTACTGA+TGG 0.454609 5.1:-67619579 MS.gene81612:CDS
TTGCCAAATATTGTTACATC+AGG 0.455392 5.1:+67619780 None:intergenic
TAAATCATAATGTGAATTTG+TGG 0.457110 5.1:+67621690 None:intergenic
AAGCCATCTCCAATTATGGC+TGG 0.460623 5.1:-67618595 MS.gene81612:CDS
ATCGATATCCTCGTCCTCAT+TGG 0.468082 5.1:+67618859 None:intergenic
TTTCTCTTGATTCTGCTTGG+TGG 0.474583 5.1:-67621283 MS.gene81612:CDS
GTAGACATATATTGTATACT+TGG 0.475700 5.1:-67621761 MS.gene81612:intron
TCCATACTTGCACCAGGTAA+AGG 0.476009 5.1:+67618884 None:intergenic
TCTTGATTCTGCTTGGTGGA+AGG 0.479653 5.1:-67621279 MS.gene81612:CDS
ATGGTCAAGTGCCATCAAAA+TGG 0.479711 5.1:-67620945 MS.gene81612:CDS
ACAAGGTCATGGGACTTCCT+TGG 0.480692 5.1:-67621326 MS.gene81612:CDS
ACTCGTACCGTCACAAATGT+TGG 0.481576 5.1:-67617336 MS.gene81612:CDS
TAGGATGCTACACGTGCTCT+AGG 0.482800 5.1:+67619729 None:intergenic
CTTAGATCATAAACAAGTCC+TGG 0.482949 5.1:+67617522 None:intergenic
CGAGTAACGTTTATAAGGTT+CGG 0.483106 5.1:+67617354 None:intergenic
CAGCCTGACATAACTGCTCC+TGG 0.483975 5.1:-67618034 MS.gene81612:CDS
ATCAAAATGGCGTGGGAATG+GGG 0.486112 5.1:-67620932 MS.gene81612:CDS
GCTTTGAAGCTGCTCTTGCA+GGG 0.490585 5.1:-67618970 MS.gene81612:CDS
CGATTATACACAGTAATTGA+AGG 0.493869 5.1:+67617381 None:intergenic
GCTGCTCTTGCAGGGGCAGT+AGG 0.496143 5.1:-67618962 MS.gene81612:CDS
ACAATATTTGGCAACGGTAA+CGG 0.497945 5.1:-67619771 MS.gene81612:CDS
TGCTCCTGGAGTGAACATAT+TGG 0.499041 5.1:-67618020 MS.gene81612:CDS
TTACTGATGGAATTTCAATT+GGG 0.504502 5.1:-67619566 MS.gene81612:CDS
TGTCCAGAACCATATTCAAA+TGG 0.505775 5.1:+67617570 None:intergenic
GTCATGGGACTTCCTTGGAC+TGG 0.505779 5.1:-67621321 MS.gene81612:CDS
GCAACATTTGTAACACTCCT+AGG 0.506230 5.1:+67619480 None:intergenic
GTGATCAATGACGAGAAAAG+TGG 0.507150 5.1:-67618932 MS.gene81612:CDS
CTTAGTAAAGGCTTACCATC+AGG 0.508204 5.1:-67619270 MS.gene81612:CDS
TACTTACGCATCTTGAATTG+TGG 0.511895 5.1:+67619191 None:intergenic
AGGATGCTACACGTGCTCTA+GGG 0.513581 5.1:+67619730 None:intergenic
GTCACGTGCTGTGAGGTTTG+AGG 0.515710 5.1:+67619854 None:intergenic
TGGTAAGCCTTTACTAAGAC+TGG 0.517145 5.1:+67619275 None:intergenic
CAGGGTGCCAGTCTTAGTAA+AGG 0.519655 5.1:-67619282 MS.gene81612:CDS
CTCGTACCGTCACAAATGTT+GGG 0.521038 5.1:-67617335 MS.gene81612:CDS
TAGACATATATTGTATACTT+GGG 0.521854 5.1:-67621760 MS.gene81612:CDS
TGTTGAAACAGGCGTTTGGC+CGG 0.521908 5.1:-67620995 MS.gene81612:intron
AACGGTAACGGCACAGCGAA+AGG 0.522680 5.1:-67619759 MS.gene81612:CDS
TTTGATCAAGCTATATATGA+TGG 0.524554 5.1:-67619645 MS.gene81612:CDS
TGTTGGTCAAAGACAGATGC+AGG 0.529348 5.1:-67619699 MS.gene81612:CDS
ATAGCAGCTGGGCTCCAACT+AGG 0.530211 5.1:+67617863 None:intergenic
TTGTTGTTGAAACAGGCGTT+TGG 0.530752 5.1:-67620999 MS.gene81612:intron
ACTCCAGGAGCAGTTATGTC+AGG 0.531162 5.1:+67618031 None:intergenic
CAGTAATTGAAGGATAATTG+AGG 0.532746 5.1:+67617391 None:intergenic
GCTGAGCCTCATCCTTTACC+TGG 0.535200 5.1:-67618896 MS.gene81612:CDS
GTATCTGATGGTAGATTCGA+TGG 0.541870 5.1:+67617974 None:intergenic
GAAATGATGGACCTGCTCCT+AGG 0.542326 5.1:-67619497 MS.gene81612:CDS
TGCTGTTGCTAAGAATGTTG+TGG 0.547062 5.1:-67619535 MS.gene81612:CDS
CCTGGATCCATTGCAAGGTT+AGG 0.548244 5.1:+67617540 None:intergenic
GCACGTGACTTTATTGGCCA+TGG 0.550564 5.1:-67619840 MS.gene81612:CDS
TAAGATACCGGTAGTCATGA+TGG 0.552107 5.1:+67617832 None:intergenic
ACACACTGATGCCCTTAGAA+AGG 0.552985 5.1:-67621899 MS.gene81612:intron
ATTAGTTTGTACTCGACTTG+AGG 0.553496 5.1:-67619014 MS.gene81612:CDS
TGCAGCTAGTACAATTGATA+GGG 0.554199 5.1:-67619439 MS.gene81612:CDS
TACTTGCTTCAATCTTAGGA+AGG 0.554717 5.1:-67621669 MS.gene81612:intron
AATATAAATTGCACACTACA+AGG 0.554754 5.1:-67621343 MS.gene81612:CDS
AATTGCACACTACAAGGTCA+TGG 0.556893 5.1:-67621337 MS.gene81612:CDS
TTGATAATGTGTGTGTGCCA+TGG 0.557883 5.1:+67619823 None:intergenic
AACCTTTCAGATAATTCTAG+AGG 0.558240 5.1:-67617214 MS.gene81612:CDS
ATTAATGGTTGCACTGCACT+AGG 0.559723 5.1:+67618556 None:intergenic
CTTTGAAGCTGCTCTTGCAG+GGG 0.560182 5.1:-67618969 MS.gene81612:CDS
GCAGCCAATATGTTCACTCC+AGG 0.562565 5.1:+67618016 None:intergenic
AGCTTCAAAGCCTTGAGCAA+CGG 0.563448 5.1:+67618982 None:intergenic
TGCACTGCTTGAAGATGAAG+AGG 0.564011 5.1:-67621510 MS.gene81612:CDS
GAGCGTGAGTGGTTTGGAAA+AGG 0.564165 5.1:-67618836 MS.gene81612:CDS
GTCTCCTAGCACATATGTTG+TGG 0.564438 5.1:-67617313 MS.gene81612:CDS
AGCCATCTCCAATTATGGCT+GGG 0.565576 5.1:-67618594 MS.gene81612:CDS
GCACATGCTTACCTTTCTAA+GGG 0.568241 5.1:+67621888 None:intergenic
ATTTCCACAACATATGTGCT+AGG 0.568399 5.1:+67617309 None:intergenic
GTGATTTCAACTTCTTTGGG+TGG 0.571887 5.1:-67619615 MS.gene81612:CDS
TGCCTCTAGAATTATCTGAA+AGG 0.572152 5.1:+67617212 None:intergenic
CACACATTATCAACAGCAGC+AGG 0.573163 5.1:-67619813 MS.gene81612:CDS
AAATCTGCCATCATGACTAC+CGG 0.576826 5.1:-67617839 MS.gene81612:intron
TTTGTAACACTCCTAGGAGC+AGG 0.583888 5.1:+67619486 None:intergenic
CTTGCACCAGGTAAAGGATG+AGG 0.584748 5.1:+67618890 None:intergenic
AGGATATCGATGAGCGTGAG+TGG 0.586801 5.1:-67618847 MS.gene81612:CDS
AACCCAGCCATAATTGGAGA+TGG 0.588591 5.1:+67618592 None:intergenic
TGGCTAACTCAAGATCATCA+AGG 0.591215 5.1:+67621710 None:intergenic
GAAACAACGTCCGTTGCTCA+AGG 0.592290 5.1:-67618992 MS.gene81612:CDS
TGATGGTAGATTCGATGGAC+TGG 0.597441 5.1:+67617979 None:intergenic
TATTCAGCCTAACCTTGCAA+TGG 0.600414 5.1:-67617547 MS.gene81612:CDS
ATCAATTGTACTAGCTGCAA+CGG 0.601740 5.1:+67619443 None:intergenic
ATTGCACACTACAAGGTCAT+GGG 0.603683 5.1:-67621336 MS.gene81612:CDS
GGATGCTACACGTGCTCTAG+GGG 0.604171 5.1:+67619731 None:intergenic
AAGTGCCATCAAAATGGCGT+GGG 0.606220 5.1:-67620939 MS.gene81612:CDS
GGAATGCGGCGTGTATCTGA+TGG 0.608485 5.1:+67617962 None:intergenic
TAGCATCCTACAAAGTATGT+TGG 0.610569 5.1:-67619716 MS.gene81612:CDS
TGGTAGATTCGATGGACTGG+TGG 0.611336 5.1:+67617982 None:intergenic
CAAGTGCCATCAAAATGGCG+TGG 0.613735 5.1:-67620940 MS.gene81612:CDS
CAAGTCCTGGATCCATTGCA+AGG 0.614140 5.1:+67617535 None:intergenic
CCGGAACATGAAAGTTTCAG+TGG 0.614835 5.1:-67620976 MS.gene81612:CDS
GGCTAACTCAAGATCATCAA+GGG 0.615881 5.1:+67621711 None:intergenic
GATGTAACAATATTTGGCAA+CGG 0.616934 5.1:-67619777 MS.gene81612:CDS
TACTTGGGAGGACATTCTCA+TGG 0.617129 5.1:-67621745 MS.gene81612:CDS
GCAATAGGTATGCCTCCTCA+TGG 0.618674 5.1:-67617192 MS.gene81612:CDS
TATGGATGCCAATGAGGACG+AGG 0.620439 5.1:-67618867 MS.gene81612:CDS
TAATAGCCATGAGAAGGCAA+AGG 0.623516 5.1:-67621576 MS.gene81612:intron
TCAATTACTGTGTATAATCG+AGG 0.623863 5.1:-67617378 MS.gene81612:CDS
AACTCAAGATCATCAAGGGA+GGG 0.624343 5.1:+67621715 None:intergenic
AGTGCAACCATTAATACTCA+AGG 0.632720 5.1:-67618548 MS.gene81612:intron
TTGGCATCCATACTTGCACC+AGG 0.635574 5.1:+67618878 None:intergenic
GTACTGACGAAAACATTACC+AGG 0.637775 5.1:-67618811 MS.gene81612:intron
CGTGAGTGGTTTGGAAAAGG+TGG 0.638528 5.1:-67618833 MS.gene81612:CDS
ACATATATTGTATACTTGGG+AGG 0.638598 5.1:-67621757 MS.gene81612:CDS
GTGTTACAAATGTTGCACCT+TGG 0.643796 5.1:-67619473 MS.gene81612:CDS
ATTCCTTACAATCTGCAACA+AGG 0.647427 5.1:-67617944 MS.gene81612:CDS
GTTGCAGATTGTAAGGAATG+CGG 0.656336 5.1:+67617948 None:intergenic
TGGCAGATTTGATAGCAGCT+GGG 0.656811 5.1:+67617852 None:intergenic
TAACTCAAGATCATCAAGGG+AGG 0.663086 5.1:+67621714 None:intergenic
AGGAGACCCAACATTTGTGA+CGG 0.664789 5.1:+67617329 None:intergenic
TGCAAGTATGGATGCCAATG+AGG 0.667123 5.1:-67618873 MS.gene81612:CDS
CAATAAAGTCACGTGCTGTG+AGG 0.667759 5.1:+67619847 None:intergenic
GGTAACGGCACAGCGAAAGG+TGG 0.679426 5.1:-67619756 MS.gene81612:CDS
AATACTGGAAAACCATGAGG+AGG 0.686042 5.1:+67617180 None:intergenic
CCAGCAATGCCAGCAACATG+AGG 0.694690 5.1:+67617905 None:intergenic
GCTGCAACGGTGAAAGACCA+AGG 0.700223 5.1:+67619456 None:intergenic
CTATAGGACTAGTTACTCTG+TGG 0.701819 5.1:+67617130 None:intergenic
CCAAATACTGGAAAACCATG+AGG 0.707398 5.1:+67617177 None:intergenic
TGGTCAAAGACAGATGCAGG+TGG 0.723373 5.1:-67619696 MS.gene81612:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATATTTAAAAGCAAAATT+TGG + chr5.1:67617268-67617287 None:intergenic 10.0%
!!! TATACGTTTATAATTAATTT+TGG + chr5.1:67618043-67618062 None:intergenic 10.0%
!! ACAAATTATAGAAAACTAAT+TGG - chr5.1:67619153-67619172 MS.gene81612:intron 15.0%
!! GTTTATTTATATTATAATGC+AGG - chr5.1:67620417-67620436 MS.gene81612:intron 15.0%
!! TTTACAGAAACTTAATTTAT+TGG - chr5.1:67619766-67619785 MS.gene81612:CDS 15.0%
!! TTTCATTAAATAATGAGAAA+GGG + chr5.1:67618354-67618373 None:intergenic 15.0%
!!! AAACATGTTTTAATTAGAAA+AGG + chr5.1:67618312-67618331 None:intergenic 15.0%
!!! AATCATTTGATATATTTTCT+TGG + chr5.1:67619841-67619860 None:intergenic 15.0%
!!! CTAAATTTTGTTTTTGATTT+AGG + chr5.1:67621335-67621354 None:intergenic 15.0%
!!! TTTTCATTAAATAATGAGAA+AGG + chr5.1:67618355-67618374 None:intergenic 15.0%
!!! TTTTTTTTTAAGCAAGTTTA+GGG + chr5.1:67619925-67619944 None:intergenic 15.0%
!!! TTTTTTTTTTAAGCAAGTTT+AGG + chr5.1:67619926-67619945 None:intergenic 15.0%
!! AAGTTATTGATAAACATCTA+CGG - chr5.1:67619016-67619035 MS.gene81612:CDS 20.0%
!! ACATTATTTATCATACTCTA+TGG - chr5.1:67618008-67618027 MS.gene81612:CDS 20.0%
!! AGTGATATCTTATAATCAAA+AGG + chr5.1:67618467-67618486 None:intergenic 20.0%
!! ATACTATATTACTACTTATG+TGG + chr5.1:67620672-67620691 None:intergenic 20.0%
!! ATTTATGAAGATAAGAAGTT+GGG + chr5.1:67618278-67618297 None:intergenic 20.0%
!! GTGATATCTTATAATCAAAA+GGG + chr5.1:67618466-67618485 None:intergenic 20.0%
!! TAAACAAAGACAATGAATAT+AGG - chr5.1:67619069-67619088 MS.gene81612:intron 20.0%
!! TAAATCATAATGTGAATTTG+TGG + chr5.1:67617393-67617412 None:intergenic 20.0%
!! TAGACATATATTGTATACTT+GGG - chr5.1:67617320-67617339 MS.gene81612:CDS 20.0%
!! TATATTATAATGCAGGAAAA+TGG - chr5.1:67620424-67620443 MS.gene81612:intron 20.0%
!! TATTTATGAAGATAAGAAGT+TGG + chr5.1:67618279-67618298 None:intergenic 20.0%
!! TCTTACAATAAGCATATAAA+TGG - chr5.1:67617541-67617560 MS.gene81612:CDS 20.0%
!! TGGTAACAAAAATTACATAA+AGG - chr5.1:67619686-67619705 MS.gene81612:CDS 20.0%
!!! ATATCTTTTTTAAGTGTGTT+TGG - chr5.1:67618642-67618661 MS.gene81612:CDS 20.0%
!!! ATATTGATTTTCTAAGATAC+CGG + chr5.1:67621263-67621282 None:intergenic 20.0%
!!! ATTAATCATCTTTGGTATTT+TGG - chr5.1:67620881-67620900 MS.gene81612:CDS 20.0%
!!! ATTTGATATATTTTCTTGGA+TGG + chr5.1:67619837-67619856 None:intergenic 20.0%
!!! TAAAGGTATGAATAGTAATA+AGG - chr5.1:67619703-67619722 MS.gene81612:CDS 20.0%
!!! TAATATCTTTCCTTTTACTT+TGG + chr5.1:67620050-67620069 None:intergenic 20.0%
!!! TATAATTTGTCACATAACAT+AGG + chr5.1:67619143-67619162 None:intergenic 20.0%
!!! TGAAATAAAGTACTGATATT+TGG + chr5.1:67618387-67618406 None:intergenic 20.0%
!!! TTGTTTTTGATTTAGGTAAA+AGG + chr5.1:67621328-67621347 None:intergenic 20.0%
!!! TTTTGTTACCAATAGAAATA+TGG + chr5.1:67619677-67619696 None:intergenic 20.0%
! AATATAAATTGCACACTACA+AGG - chr5.1:67617737-67617756 MS.gene81612:intron 25.0%
! AATTTATTCCATGACTAAGA+AGG + chr5.1:67618417-67618436 None:intergenic 25.0%
! AATTTATTGGATCGTATTTC+AGG - chr5.1:67619779-67619798 MS.gene81612:CDS 25.0%
! AATTTGTGTTTAAGCTGAAA+AGG - chr5.1:67618808-67618827 MS.gene81612:intron 25.0%
! AGATGTTAAATAGAAGAACT+TGG - chr5.1:67617921-67617940 MS.gene81612:CDS 25.0%
! ATCATTGCTAATTTAGATTC+AGG - chr5.1:67617844-67617863 MS.gene81612:CDS 25.0%
! ATTTATTGGATCGTATTTCA+GGG - chr5.1:67619780-67619799 MS.gene81612:CDS 25.0%
! GAATGATGATAGAAAAAGTT+TGG + chr5.1:67617138-67617157 None:intergenic 25.0%
! GTAAACAAAGCTTCAATATA+TGG + chr5.1:67619498-67619517 None:intergenic 25.0%
! GTAGACATATATTGTATACT+TGG - chr5.1:67617319-67617338 MS.gene81612:CDS 25.0%
! TCAACAACTTGAAGAATTTA+AGG - chr5.1:67621794-67621813 MS.gene81612:intron 25.0%
! TCAGTTCGATAAAAAAAACA+AGG - chr5.1:67620730-67620749 MS.gene81612:intron 25.0%
! TCATTGACATTTAAGGAAAT+TGG - chr5.1:67621834-67621853 MS.gene81612:intron 25.0%
! TGAATGTAGGATTGAAAAAT+AGG + chr5.1:67620973-67620992 None:intergenic 25.0%
! TGTATGAATGAGTATAAGAA+GGG + chr5.1:67617223-67617242 None:intergenic 25.0%
! TTACTGATGGAATTTCAATT+GGG - chr5.1:67619514-67619533 MS.gene81612:CDS 25.0%
! TTAGAGTAAGAAATAAATGC+TGG + chr5.1:67618250-67618269 None:intergenic 25.0%
! TTGCAAAATGTTGTATTTGA+AGG + chr5.1:67618200-67618219 None:intergenic 25.0%
! TTGTATACCTTGAGTATTAA+TGG + chr5.1:67620542-67620561 None:intergenic 25.0%
! TTTACTGATGGAATTTCAAT+TGG - chr5.1:67619513-67619532 MS.gene81612:CDS 25.0%
! TTTATGAAGATAAGAAGTTG+GGG + chr5.1:67618277-67618296 None:intergenic 25.0%
! TTTGATCAAGCTATATATGA+TGG - chr5.1:67619435-67619454 MS.gene81612:CDS 25.0%
! TTTGGATATTAAGACTATAG+AGG + chr5.1:67617250-67617269 None:intergenic 25.0%
!! CAACAATTATTTCTTTACCA+TGG - chr5.1:67617613-67617632 MS.gene81612:CDS 25.0%
!! GATAGAAAAAGTTTGGTAAT+AGG + chr5.1:67617131-67617150 None:intergenic 25.0%
!! TTGAACTTCATTTGTGTTTT+TGG - chr5.1:67621594-67621613 MS.gene81612:intron 25.0%
!! TTTTCAATGTTGTAAAACTC+AGG + chr5.1:67621669-67621688 None:intergenic 25.0%
!! TTTTCAGCTTAAACACAAAT+TGG + chr5.1:67618809-67618828 None:intergenic 25.0%
!!! AGCATTGATATTGTATAGTT+GGG + chr5.1:67618533-67618552 None:intergenic 25.0%
!!! GAAATATAAGTTGAGTTTTG+AGG + chr5.1:67620772-67620791 None:intergenic 25.0%
AAAATGACTCAACAAATCCA+TGG + chr5.1:67617633-67617652 None:intergenic 30.0%
AACCTTTCAGATAATTCTAG+AGG - chr5.1:67621866-67621885 MS.gene81612:intron 30.0%
AAGCTGAAAAGGTTTAACAA+CGG - chr5.1:67618819-67618838 MS.gene81612:CDS 30.0%
ACAAAATAAGTGAAGAAGAG+TGG + chr5.1:67621000-67621019 None:intergenic 30.0%
ACATAACATAGGAATGTGTT+AGG + chr5.1:67619132-67619151 None:intergenic 30.0%
ACATATATTGTATACTTGGG+AGG - chr5.1:67617323-67617342 MS.gene81612:CDS 30.0%
ACCAAGTTCATTGACATTTA+AGG - chr5.1:67621827-67621846 MS.gene81612:intron 30.0%
ACTATATTCCTTCTTAGTCA+TGG - chr5.1:67618406-67618425 MS.gene81612:intron 30.0%
ATGTAGGATTGAAAAATAGG+TGG + chr5.1:67620970-67620989 None:intergenic 30.0%
ATTAAAGCCATCTCCAATTA+TGG - chr5.1:67620481-67620500 MS.gene81612:intron 30.0%
ATTAACACTAAGTGCATGTT+TGG + chr5.1:67618763-67618782 None:intergenic 30.0%
CAAAACTACGAATCACAATA+TGG - chr5.1:67619192-67619211 MS.gene81612:intron 30.0%
CAGTAATTGAAGGATAATTG+AGG + chr5.1:67621692-67621711 None:intergenic 30.0%
CGATTATACACAGTAATTGA+AGG + chr5.1:67621702-67621721 None:intergenic 30.0%
CTGTATGAATGAGTATAAGA+AGG + chr5.1:67617224-67617243 None:intergenic 30.0%
GATGTAACAATATTTGGCAA+CGG - chr5.1:67619303-67619322 MS.gene81612:intron 30.0%
GATGTGATTTCAACTTCTTT+GGG - chr5.1:67619462-67619481 MS.gene81612:CDS 30.0%
GATTTACTTGCTTCAATCTT+AGG - chr5.1:67617407-67617426 MS.gene81612:CDS 30.0%
GTGTTAATTAAGACTCACAT+TGG - chr5.1:67618775-67618794 MS.gene81612:intron 30.0%
GTTTAAAGACTATGCACTAA+CGG - chr5.1:67620305-67620324 MS.gene81612:intron 30.0%
TCAATTACTGTGTATAATCG+AGG - chr5.1:67621702-67621721 MS.gene81612:CDS 30.0%
TCACCTGATGTAACAATATT+TGG - chr5.1:67619297-67619316 MS.gene81612:intron 30.0%
TCCTTAAATGTCAATGAACT+TGG + chr5.1:67621831-67621850 None:intergenic 30.0%
TGATGTGATTTCAACTTCTT+TGG - chr5.1:67619461-67619480 MS.gene81612:CDS 30.0%
TGATTCTCATACTTCAACTT+GGG - chr5.1:67618499-67618518 MS.gene81612:intron 30.0%
TGTGCAACATATCATTGAAT+TGG + chr5.1:67617973-67617992 None:intergenic 30.0%
TTGATTCTCATACTTCAACT+TGG - chr5.1:67618498-67618517 MS.gene81612:intron 30.0%
TTGCCAAATATTGTTACATC+AGG + chr5.1:67619303-67619322 None:intergenic 30.0%
! AGGAACCTAAACTTTTATTG+CGG - chr5.1:67620854-67620873 MS.gene81612:intron 30.0%
! ATCTTTCCTTTTACTTTGGT+AGG + chr5.1:67620046-67620065 None:intergenic 30.0%
! CAAATACAACATTTTGCAAC+AGG - chr5.1:67618201-67618220 MS.gene81612:intron 30.0%
! CATATTGTGATTCGTAGTTT+TGG + chr5.1:67619194-67619213 None:intergenic 30.0%
! TCTGAAGCAAAAACATATAC+AGG - chr5.1:67620458-67620477 MS.gene81612:intron 30.0%
! TTTGTCAGCCATATTTCTAT+TGG - chr5.1:67619666-67619685 MS.gene81612:CDS 30.0%
! TTTTTGTAATAGCCATGAGA+AGG - chr5.1:67617498-67617517 MS.gene81612:CDS 30.0%
!! AAAATTTCTAGTTGCGTCTA+CGG - chr5.1:67620587-67620606 MS.gene81612:intron 30.0%
!! AGACTCATCTCTTGTTATTT+CGG + chr5.1:67618585-67618604 None:intergenic 30.0%
!! ATTGAAGCTTTGTTTACTGA+TGG - chr5.1:67619501-67619520 MS.gene81612:CDS 30.0%
!! CAAAGATCACTCACTTTTAA+GGG - chr5.1:67621408-67621427 MS.gene81612:intron 30.0%
!! GAGCATTGATATTGTATAGT+TGG + chr5.1:67618534-67618553 None:intergenic 30.0%
!! TCAAAGATCACTCACTTTTA+AGG - chr5.1:67621407-67621426 MS.gene81612:intron 30.0%
!!! TTTTTTCAAATCAACACCGA+CGG - chr5.1:67620804-67620823 MS.gene81612:intron 30.0%
AACTAAGGTCCTTGTGTATT+TGG + chr5.1:67618559-67618578 None:intergenic 35.0%
AATGCTCTACCAAATACACA+AGG - chr5.1:67618547-67618566 MS.gene81612:intron 35.0%
ACAATATTTGGCAACGGTAA+CGG - chr5.1:67619309-67619328 MS.gene81612:intron 35.0%
ACGGAGAGACATAAAATGTA+AGG - chr5.1:67618838-67618857 MS.gene81612:CDS 35.0%
ACTCCATTTGAATATGGTTC+TGG - chr5.1:67621507-67621526 MS.gene81612:CDS 35.0%
AGTGCAACCATTAATACTCA+AGG - chr5.1:67620532-67620551 MS.gene81612:intron 35.0%
ATAGCGACTCCATTTGAATA+TGG - chr5.1:67621501-67621520 MS.gene81612:CDS 35.0%
ATCAATTGTACTAGCTGCAA+CGG + chr5.1:67619640-67619659 None:intergenic 35.0%
ATTCCTTACAATCTGCAACA+AGG - chr5.1:67621136-67621155 MS.gene81612:intron 35.0%
ATTTCCACAACATATGTGCT+AGG + chr5.1:67621774-67621793 None:intergenic 35.0%
CAAGTCAATTTCCCAAATAC+TGG + chr5.1:67621918-67621937 None:intergenic 35.0%
CAGTATTTGGGAAATTGACT+TGG - chr5.1:67621916-67621935 MS.gene81612:CDS 35.0%
CGAGTAACGTTTATAAGGTT+CGG + chr5.1:67621729-67621748 None:intergenic 35.0%
CTTAGATCATAAACAAGTCC+TGG + chr5.1:67621561-67621580 None:intergenic 35.0%
CTTGATCCTACCAAAGTAAA+AGG - chr5.1:67620037-67620056 MS.gene81612:intron 35.0%
CTTTGACCAACATACTTTGT+AGG + chr5.1:67619373-67619392 None:intergenic 35.0%
GAATTTCTCTTGATTCTGCT+TGG - chr5.1:67617794-67617813 MS.gene81612:intron 35.0%
GATTCTCATACTTCAACTTG+GGG - chr5.1:67618500-67618519 MS.gene81612:intron 35.0%
TAAACTCGTATGAGTTTACC+TGG + chr5.1:67620290-67620309 None:intergenic 35.0%
TACTTACGCATCTTGAATTG+TGG + chr5.1:67619892-67619911 None:intergenic 35.0%
TACTTGCTTCAATCTTAGGA+AGG - chr5.1:67617411-67617430 MS.gene81612:CDS 35.0%
TAGCATCCTACAAAGTATGT+TGG - chr5.1:67619364-67619383 MS.gene81612:intron 35.0%
TAGCGAAATCTGATTGAAGA+CGG + chr5.1:67620348-67620367 None:intergenic 35.0%
TGCAGCTAGTACAATTGATA+GGG - chr5.1:67619641-67619660 MS.gene81612:CDS 35.0%
TGTCCAGAACCATATTCAAA+TGG + chr5.1:67621513-67621532 None:intergenic 35.0%
TGTTGCCGCAATAAAAGTTT+AGG + chr5.1:67620862-67620881 None:intergenic 35.0%
TTGCAGCTAGTACAATTGAT+AGG - chr5.1:67619640-67619659 MS.gene81612:CDS 35.0%
! CAGATAATTCTAGAGGCAAT+AGG - chr5.1:67621873-67621892 MS.gene81612:intron 35.0%
! CTCATGGTTTTCCAGTATTT+GGG - chr5.1:67621904-67621923 MS.gene81612:CDS 35.0%
! GACTTTTCTACATATACTGC+AGG + chr5.1:67621389-67621408 None:intergenic 35.0%
!! ATTAGTTTGTACTCGACTTG+AGG - chr5.1:67620066-67620085 MS.gene81612:intron 35.0%
!! GACATGTTTGTTGTTGAAAC+AGG - chr5.1:67618074-67618093 MS.gene81612:intron 35.0%
!! GACTCATCTCTTGTTATTTC+GGG + chr5.1:67618584-67618603 None:intergenic 35.0%
!! TGCCTCTAGAATTATCTGAA+AGG + chr5.1:67621871-67621890 None:intergenic 35.0%
!! TTGTTATTTCGGGACAACTA+AGG + chr5.1:67618574-67618593 None:intergenic 35.0%
!!! TTATTCCAGTCGTTTTTGCA+AGG - chr5.1:67620006-67620025 MS.gene81612:intron 35.0%
AAATCTGCCATCATGACTAC+CGG - chr5.1:67621241-67621260 MS.gene81612:CDS 40.0%
AACTCAAGATCATCAAGGGA+GGG + chr5.1:67617368-67617387 None:intergenic 40.0%
AACTGAGATGATGTCCCAAT+CGG - chr5.1:67620705-67620724 MS.gene81612:intron 40.0%
AATACTGGAAAACCATGAGG+AGG + chr5.1:67621903-67621922 None:intergenic 40.0%
AATTGCACACTACAAGGTCA+TGG - chr5.1:67617743-67617762 MS.gene81612:intron 40.0%
ACTTCAATTCTCTACCCTAG+TGG - chr5.1:67620944-67620963 MS.gene81612:CDS 40.0%
AGCACATGCTTACCTTTCTA+AGG + chr5.1:67617196-67617215 None:intergenic 40.0%
ATGGTCAAGTGCCATCAAAA+TGG - chr5.1:67618135-67618154 MS.gene81612:intron 40.0%
ATTAATGGTTGCACTGCACT+AGG + chr5.1:67620527-67620546 None:intergenic 40.0%
ATTGCACACTACAAGGTCAT+GGG - chr5.1:67617744-67617763 MS.gene81612:intron 40.0%
CATGAAAGTTTCAGTGGCAT+TGG - chr5.1:67618110-67618129 MS.gene81612:intron 40.0%
CCAAATACTGGAAAACCATG+AGG + chr5.1:67621906-67621925 None:intergenic 40.0%
CCACTGAAACTTTCATGTTC+CGG + chr5.1:67618107-67618126 None:intergenic 40.0%
CGGTACGAGTAACGTTTATA+AGG + chr5.1:67621734-67621753 None:intergenic 40.0%
CTAGTGTTGTAGCTGCAAAA+AGG + chr5.1:67621443-67621462 None:intergenic 40.0%
CTTAGTAAAGGCTTACCATC+AGG - chr5.1:67619810-67619829 MS.gene81612:CDS 40.0%
GAAGAGTGGACATTGAATGT+AGG + chr5.1:67620986-67621005 None:intergenic 40.0%
GATGAAAACCCAGCCATAAT+TGG + chr5.1:67620497-67620516 None:intergenic 40.0%
GCAACATTTGTAACACTCCT+AGG + chr5.1:67619603-67619622 None:intergenic 40.0%
GCACATGCTTACCTTTCTAA+GGG + chr5.1:67617195-67617214 None:intergenic 40.0%
GCGGCAACATTAATCATCTT+TGG - chr5.1:67620873-67620892 MS.gene81612:intron 40.0%
GGCTAACTCAAGATCATCAA+GGG + chr5.1:67617372-67617391 None:intergenic 40.0%
GTGATCAATGACGAGAAAAG+TGG - chr5.1:67620148-67620167 MS.gene81612:intron 40.0%
GTGATTTCAACTTCTTTGGG+TGG - chr5.1:67619465-67619484 MS.gene81612:CDS 40.0%
GTGTTACAAATGTTGCACCT+TGG - chr5.1:67619607-67619626 MS.gene81612:CDS 40.0%
GTTCCTTGTTGCAGATTGTA+AGG + chr5.1:67621142-67621161 None:intergenic 40.0%
GTTGCAGATTGTAAGGAATG+CGG + chr5.1:67621135-67621154 None:intergenic 40.0%
GTTTGTTCTGCTGGAAATGA+TGG - chr5.1:67619570-67619589 MS.gene81612:CDS 40.0%
TAACTCAAGATCATCAAGGG+AGG + chr5.1:67617369-67617388 None:intergenic 40.0%
TAAGATACCGGTAGTCATGA+TGG + chr5.1:67621251-67621270 None:intergenic 40.0%
TAATAGCCATGAGAAGGCAA+AGG - chr5.1:67617504-67617523 MS.gene81612:CDS 40.0%
TATTCAGCCTAACCTTGCAA+TGG - chr5.1:67621533-67621552 MS.gene81612:CDS 40.0%
TCAAGACACTTCATCCTAGT+TGG - chr5.1:67621203-67621222 MS.gene81612:intron 40.0%
TGAAAAATAGGTGGCCACTA+GGG + chr5.1:67620961-67620980 None:intergenic 40.0%
TGCTGTTGCTAAGAATGTTG+TGG - chr5.1:67619545-67619564 MS.gene81612:CDS 40.0%
TGGCTAACTCAAGATCATCA+AGG + chr5.1:67617373-67617392 None:intergenic 40.0%
TGGTAAGCCTTTACTAAGAC+TGG + chr5.1:67619808-67619827 None:intergenic 40.0%
TTGAAAAATAGGTGGCCACT+AGG + chr5.1:67620962-67620981 None:intergenic 40.0%
TTTATCGAACTGATGCCGAT+TGG + chr5.1:67620723-67620742 None:intergenic 40.0%
TTTCTCTTGATTCTGCTTGG+TGG - chr5.1:67617797-67617816 MS.gene81612:intron 40.0%
! AGTTTCAGTGGCATTGGATA+TGG - chr5.1:67618116-67618135 MS.gene81612:intron 40.0%
! ATTTTCTTGGATGGACCTGA+TGG + chr5.1:67619828-67619847 None:intergenic 40.0%
! CCTCATGGTTTTCCAGTATT+TGG - chr5.1:67621903-67621922 MS.gene81612:CDS 40.0%
! GTACTGACGAAAACATTACC+AGG - chr5.1:67620269-67620288 MS.gene81612:intron 40.0%
! TATGGCTGGGTTTTCATCTA+GGG - chr5.1:67620499-67620518 MS.gene81612:intron 40.0%
! TTATCGAACTGATGCCGATT+GGG + chr5.1:67620722-67620741 None:intergenic 40.0%
! TTATGGCTGGGTTTTCATCT+AGG - chr5.1:67620498-67620517 MS.gene81612:intron 40.0%
! TTCCTTGGACTGGAAAAAGA+TGG - chr5.1:67617769-67617788 MS.gene81612:intron 40.0%
! TTGTTGTTGAAACAGGCGTT+TGG - chr5.1:67618081-67618100 MS.gene81612:intron 40.0%
!! AACATCTACGGTGTTGTGTA+TGG - chr5.1:67619028-67619047 MS.gene81612:CDS 40.0%
!! CTATAGGACTAGTTACTCTG+TGG + chr5.1:67621953-67621972 None:intergenic 40.0%
!! GGGAAATTGACTTGGACAAA+TGG - chr5.1:67621924-67621943 MS.gene81612:CDS 40.0%
!! TTGATAATGTGTGTGTGCCA+TGG + chr5.1:67619260-67619279 None:intergenic 40.0%
!! TTTAGCCTTGCAAAAACGAC+TGG + chr5.1:67620014-67620033 None:intergenic 40.0%
AACCCAGCCATAATTGGAGA+TGG + chr5.1:67620491-67620510 None:intergenic 45.0%
AAGCCATCTCCAATTATGGC+TGG - chr5.1:67620485-67620504 MS.gene81612:intron 45.0%
AAGTGCCATCAAAATGGCGT+GGG - chr5.1:67618141-67618160 MS.gene81612:intron 45.0%
ACACACTGATGCCCTTAGAA+AGG - chr5.1:67617181-67617200 MS.gene81612:CDS 45.0%
ACTCGTACCGTCACAAATGT+TGG - chr5.1:67621744-67621763 MS.gene81612:CDS 45.0%
AGATCATCAAGGGAGGGATT+TGG + chr5.1:67617362-67617381 None:intergenic 45.0%
AGCCATCTCCAATTATGGCT+GGG - chr5.1:67620486-67620505 MS.gene81612:intron 45.0%
AGCTTCAAAGCCTTGAGCAA+CGG + chr5.1:67620101-67620120 None:intergenic 45.0%
AGGAGACCCAACATTTGTGA+CGG + chr5.1:67621754-67621773 None:intergenic 45.0%
ATCAAAATGGCGTGGGAATG+GGG - chr5.1:67618148-67618167 MS.gene81612:intron 45.0%
ATCGATATCCTCGTCCTCAT+TGG + chr5.1:67620224-67620243 None:intergenic 45.0%
ATGTCTTGTCCTCATGTTGC+TGG - chr5.1:67621166-67621185 MS.gene81612:intron 45.0%
CAATAAAGTCACGTGCTGTG+AGG + chr5.1:67619236-67619255 None:intergenic 45.0%
CACACATTATCAACAGCAGC+AGG - chr5.1:67619267-67619286 MS.gene81612:CDS 45.0%
CATCAAAATGGCGTGGGAAT+GGG - chr5.1:67618147-67618166 MS.gene81612:intron 45.0%
CCGGAACATGAAAGTTTCAG+TGG - chr5.1:67618104-67618123 MS.gene81612:intron 45.0%
CTCACAGCACGTGACTTTAT+TGG - chr5.1:67619234-67619253 MS.gene81612:CDS 45.0%
CTCGTACCGTCACAAATGTT+GGG - chr5.1:67621745-67621764 MS.gene81612:CDS 45.0%
CTGTTTCCTTTGCCTTCTCA+TGG + chr5.1:67617513-67617532 None:intergenic 45.0%
GTCTCCTAGCACATATGTTG+TGG - chr5.1:67621767-67621786 MS.gene81612:intron 45.0%
GTTGTGGTTGTTTGTTCTGC+TGG - chr5.1:67619561-67619580 MS.gene81612:CDS 45.0%
TACTTGGGAGGACATTCTCA+TGG - chr5.1:67617335-67617354 MS.gene81612:CDS 45.0%
TAGGTTCCTCCACATCCTTA+GGG + chr5.1:67620843-67620862 None:intergenic 45.0%
TCCATACTTGCACCAGGTAA+AGG + chr5.1:67620199-67620218 None:intergenic 45.0%
TCCTTTACCTGGTGCAAGTA+TGG - chr5.1:67620195-67620214 MS.gene81612:intron 45.0%
TGCAAGTATGGATGCCAATG+AGG - chr5.1:67620207-67620226 MS.gene81612:intron 45.0%
TGCACTGCTTGAAGATGAAG+AGG - chr5.1:67617570-67617589 MS.gene81612:CDS 45.0%
TGCTCCTGGAGTGAACATAT+TGG - chr5.1:67621060-67621079 MS.gene81612:intron 45.0%
TGTTGGTCAAAGACAGATGC+AGG - chr5.1:67619381-67619400 MS.gene81612:intron 45.0%
TTAGGTTCCTCCACATCCTT+AGG + chr5.1:67620844-67620863 None:intergenic 45.0%
TTATCGAACGCGTCTCTGAT+TGG + chr5.1:67621480-67621499 None:intergenic 45.0%
TTTGTAACACTCCTAGGAGC+AGG + chr5.1:67619597-67619616 None:intergenic 45.0%
! ATGGCAGATTTGATAGCAGC+TGG + chr5.1:67621232-67621251 None:intergenic 45.0%
! ATGGCTGGGTTTTCATCTAG+GGG - chr5.1:67620500-67620519 MS.gene81612:intron 45.0%
! CACCATCTTTTTCCAGTCCA+AGG + chr5.1:67617774-67617793 None:intergenic 45.0%
! CTTGGACTGGAAAAAGATGG+TGG - chr5.1:67617772-67617791 MS.gene81612:intron 45.0%
! TCTTGATTCTGCTTGGTGGA+AGG - chr5.1:67617801-67617820 MS.gene81612:intron 45.0%
! TGGCAGATTTGATAGCAGCT+GGG + chr5.1:67621231-67621250 None:intergenic 45.0%
ACAAGGTCATGGGACTTCCT+TGG - chr5.1:67617754-67617773 MS.gene81612:intron 50.0%
ACTCCAGGAGCAGTTATGTC+AGG + chr5.1:67621052-67621071 None:intergenic 50.0%
AGGATATCGATGAGCGTGAG+TGG - chr5.1:67620233-67620252 MS.gene81612:intron 50.0%
AGGATGCTACACGTGCTCTA+GGG + chr5.1:67619353-67619372 None:intergenic 50.0%
ATCGATGAGCGTGAGTGGTT+TGG - chr5.1:67620238-67620257 MS.gene81612:intron 50.0%
CAAGTCCTGGATCCATTGCA+AGG + chr5.1:67621548-67621567 None:intergenic 50.0%
CAAGTGCCATCAAAATGGCG+TGG - chr5.1:67618140-67618159 MS.gene81612:intron 50.0%
CCATCAAAATGGCGTGGGAA+TGG - chr5.1:67618146-67618165 MS.gene81612:intron 50.0%
CCTAACCTTGCAATGGATCC+AGG - chr5.1:67621540-67621559 MS.gene81612:CDS 50.0%
CCTGGATCCATTGCAAGGTT+AGG + chr5.1:67621543-67621562 None:intergenic 50.0%
CTTGCACCAGGTAAAGGATG+AGG + chr5.1:67620193-67620212 None:intergenic 50.0%
GAAACAACGTCCGTTGCTCA+AGG - chr5.1:67620088-67620107 MS.gene81612:intron 50.0%
GCAATAGGTATGCCTCCTCA+TGG - chr5.1:67621888-67621907 MS.gene81612:intron 50.0%
GCACGTGACTTTATTGGCCA+TGG - chr5.1:67619240-67619259 MS.gene81612:CDS 50.0%
GCAGCCAATATGTTCACTCC+AGG + chr5.1:67621067-67621086 None:intergenic 50.0%
TAGGATGCTACACGTGCTCT+AGG + chr5.1:67619354-67619373 None:intergenic 50.0%
TATGGATGCCAATGAGGACG+AGG - chr5.1:67620213-67620232 MS.gene81612:intron 50.0%
TCACGTGCTGTGAGGTTTGA+GGG + chr5.1:67619228-67619247 None:intergenic 50.0%
TGGTCAAAGACAGATGCAGG+TGG - chr5.1:67619384-67619403 MS.gene81612:intron 50.0%
TGTTGAAACAGGCGTTTGGC+CGG - chr5.1:67618085-67618104 MS.gene81612:intron 50.0%
TTGGCATCCATACTTGCACC+AGG + chr5.1:67620205-67620224 None:intergenic 50.0%
! CAGGGTGCCAGTCTTAGTAA+AGG - chr5.1:67619798-67619817 MS.gene81612:CDS 50.0%
! CGTGAGTGGTTTGGAAAAGG+TGG - chr5.1:67620247-67620266 MS.gene81612:intron 50.0%
! GAGCGTGAGTGGTTTGGAAA+AGG - chr5.1:67620244-67620263 MS.gene81612:intron 50.0%
! GCTTGGTGGAAGGCAAGATT+TGG - chr5.1:67617811-67617830 MS.gene81612:intron 50.0%
! TTCTAGTTGCGTCTACGGTG+AGG - chr5.1:67620592-67620611 MS.gene81612:intron 50.0%
!! CCATTCCCACGCCATTTTGA+TGG + chr5.1:67618149-67618168 None:intergenic 50.0%
!! CTTTGAAGCTGCTCTTGCAG+GGG - chr5.1:67620111-67620130 MS.gene81612:intron 50.0%
!! GAAATGATGGACCTGCTCCT+AGG - chr5.1:67619583-67619602 MS.gene81612:CDS 50.0%
!! GCTTTGAAGCTGCTCTTGCA+GGG - chr5.1:67620110-67620129 MS.gene81612:intron 50.0%
ATAGCAGCTGGGCTCCAACT+AGG + chr5.1:67621220-67621239 None:intergenic 55.0%
CAGCCTGACATAACTGCTCC+TGG - chr5.1:67621046-67621065 MS.gene81612:intron 55.0%
CCAGCAATGCCAGCAACATG+AGG + chr5.1:67621178-67621197 None:intergenic 55.0%
CCTCATGTTGCTGGCATTGC+TGG - chr5.1:67621175-67621194 MS.gene81612:intron 55.0%
CTGTCTCAGCCCTAAGGATG+TGG - chr5.1:67620831-67620850 MS.gene81612:intron 55.0%
GCTGAGCCTCATCCTTTACC+TGG - chr5.1:67620184-67620203 MS.gene81612:intron 55.0%
GCTGCAACGGTGAAAGACCA+AGG + chr5.1:67619627-67619646 None:intergenic 55.0%
GGATCACTGTCTCAGCCCTA+AGG - chr5.1:67620825-67620844 MS.gene81612:intron 55.0%
GGATGCTACACGTGCTCTAG+GGG + chr5.1:67619352-67619371 None:intergenic 55.0%
GTCACGTGCTGTGAGGTTTG+AGG + chr5.1:67619229-67619248 None:intergenic 55.0%
GTCATGGGACTTCCTTGGAC+TGG - chr5.1:67617759-67617778 MS.gene81612:intron 55.0%
TCTCAGCCCTAAGGATGTGG+AGG - chr5.1:67620834-67620853 MS.gene81612:intron 55.0%
! AACGGTAACGGCACAGCGAA+AGG - chr5.1:67619321-67619340 MS.gene81612:intron 55.0%
!! GGCTTTGAAGCTGCTCTTGC+AGG - chr5.1:67620109-67620128 MS.gene81612:intron 55.0%
GGGCTGAGACAGTGATCCGT+CGG + chr5.1:67620823-67620842 None:intergenic 60.0%
! GGTAACGGCACAGCGAAAGG+TGG - chr5.1:67619324-67619343 MS.gene81612:intron 60.0%
GCTGCTCTTGCAGGGGCAGT+AGG - chr5.1:67620118-67620137 MS.gene81612:intron 65.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 67617119 67621983 67617119 ID=MS.gene81612
chr5.1 mRNA 67617119 67621983 67617119 ID=MS.gene81612.t1;Parent=MS.gene81612
chr5.1 exon 67621900 67621983 67621900 ID=MS.gene81612.t1.exon1;Parent=MS.gene81612.t1
chr5.1 CDS 67621900 67621983 67621900 ID=cds.MS.gene81612.t1;Parent=MS.gene81612.t1
chr5.1 exon 67621670 67621779 67621670 ID=MS.gene81612.t1.exon2;Parent=MS.gene81612.t1
chr5.1 CDS 67621670 67621779 67621670 ID=cds.MS.gene81612.t1;Parent=MS.gene81612.t1
chr5.1 exon 67621495 67621592 67621495 ID=MS.gene81612.t1.exon3;Parent=MS.gene81612.t1
chr5.1 CDS 67621495 67621592 67621495 ID=cds.MS.gene81612.t1;Parent=MS.gene81612.t1
chr5.1 exon 67621237 67621401 67621237 ID=MS.gene81612.t1.exon4;Parent=MS.gene81612.t1
chr5.1 CDS 67621237 67621401 67621237 ID=cds.MS.gene81612.t1;Parent=MS.gene81612.t1
chr5.1 exon 67620880 67621006 67620880 ID=MS.gene81612.t1.exon5;Parent=MS.gene81612.t1
chr5.1 CDS 67620880 67621006 67620880 ID=cds.MS.gene81612.t1;Parent=MS.gene81612.t1
chr5.1 exon 67619395 67619938 67619395 ID=MS.gene81612.t1.exon6;Parent=MS.gene81612.t1
chr5.1 CDS 67619395 67619938 67619395 ID=cds.MS.gene81612.t1;Parent=MS.gene81612.t1
chr5.1 exon 67619198 67619301 67619198 ID=MS.gene81612.t1.exon7;Parent=MS.gene81612.t1
chr5.1 CDS 67619198 67619301 67619198 ID=cds.MS.gene81612.t1;Parent=MS.gene81612.t1
chr5.1 exon 67618812 67619087 67618812 ID=MS.gene81612.t1.exon8;Parent=MS.gene81612.t1
chr5.1 CDS 67618812 67619087 67618812 ID=cds.MS.gene81612.t1;Parent=MS.gene81612.t1
chr5.1 exon 67618549 67618663 67618549 ID=MS.gene81612.t1.exon9;Parent=MS.gene81612.t1
chr5.1 CDS 67618549 67618663 67618549 ID=cds.MS.gene81612.t1;Parent=MS.gene81612.t1
chr5.1 exon 67617840 67618053 67617840 ID=MS.gene81612.t1.exon10;Parent=MS.gene81612.t1
chr5.1 CDS 67617840 67618053 67617840 ID=cds.MS.gene81612.t1;Parent=MS.gene81612.t1
chr5.1 exon 67617119 67617651 67617119 ID=MS.gene81612.t1.exon11;Parent=MS.gene81612.t1
chr5.1 CDS 67617119 67617651 67617119 ID=cds.MS.gene81612.t1;Parent=MS.gene81612.t1
Gene Sequence

>MS.gene81612

ATGTCATATCCTATTACCAAACTTTTTCTATCATCATTCATTCTTTGCAGTTTCTTGCTAGAACACACTGATGCCCTTAGAAAGGTAAGCATGTGCTCAATCCCTTCTTATACTCATTCATACAGTTACCTCTATAGTCTTAATATCCAAATTTTGCTTTTAAATATAACAATATATATTTCATAATTGTTTTCTCTTTTGTAGACATATATTGTATACTTGGGAGGACATTCTCATGGTCCAAATCCCTCCCTTGATGATCTTGAGTTAGCCACAAATTCACATTATGATTTACTTGCTTCAATCTTAGGAAGGTACATAGTTTATTAATTTTATTTTACATATTCTAAGACACTAGAGAAATTCTAAAATAGTTGAGTTTTTGTAATAGCCATGAGAAGGCAAAGGAAACAGTGATGTACTCTTACAATAAGCATATAAATGGATTTGCTGCACTGCTTGAAGATGAAGAGGCATCAAAGATTGCAAGTGAGCAACAATTATTTCTTTACCATGGATTTGTTGAGTCATTTTTTAAGACACAAATTGACACTATTTATATGTGTTTCTATGTTCGTGCAGATAACTCAAATGTAGTTTCTGTTTTCTTGAGCAAAGAATATAAATTGCACACTACAAGGTCATGGGACTTCCTTGGACTGGAAAAAGATGGTGGAATTTCTCTTGATTCTGCTTGGTGGAAGGCAAGATTTGGTGAAGATTCAATCATTGCTAATTTAGATTCAGGTTAGTTTTTATAGATGAAAAAAATAATTAAGTAAATATTTCATATTTCATATCTAGATGTTAAATAGAAGAACTTGGTGAGTAAAATAATTTCACGTGTGCATCCAATTCAATGATATGTTGCACATCATGAGTTAAAAACACATTATTTATCATACTCTATGGTTTCACATTCCAAAATTAATTATAAACGTATAAAATTGATTTTGACATGTTTGTTGTTGAAACAGGCGTTTGGCCGGAACATGAAAGTTTCAGTGGCATTGGATATGGTCAAGTGCCATCAAAATGGCGTGGGAATGGGGTCTGTGAGATTGATCATTTTATTACACCTTCAAATACAACATTTTGCAACAGGTCATTTTCTTGAGTTATTTCATTCCAGCATTTATTTCTTACTCTAAATTACCCCAACTTCTTATCTTCATAAATAAAACTGTTGTCCTTTTCTAATTAAAACATGTTTTGTAATTTTAGTGTAATGTCCCTTTCTCATTATTTAATGAAAATCATGTGTGCCAAATATCAGTACTTTATTTCACTATATTCCTTCTTAGTCATGGAATAAATTTCATTTTTAAAAAGAAAACTTAATTTCCCTTTTGATTATAAGATATCACTCTTGTGAAATATTGATTCTCATACTTCAACTTGGGGAATAGATCCCAACTATACAATATCAATGCTCTACCAAATACACAAGGACCTTAGTTGTCCCGAAATAACAAGAGATGAGTCTTCACGTGCAACATGTTTCTGATAACTATATGTGTTTGATATCTTTTTTAAGTGTGTTTGGTTTCGCTTTTGCAACACATTAAAGCATGTTTGCACGCTTCTCAGTGCATTTTTGCTGTGATTTTCAGAAGTTCTAAATACTAGCTTTTATGCTAACCAAACATGCACTTAGTGTTAATTAAGACTCACATTGGACACGTAGCCAATTTGTGTTTAAGCTGAAAAGGTTTAACAACGGAGAGACATAAAATGTAAGGATCTAGATATAATATACTTTAGAAACTCGATTCACACAATAAATAAAGAAAGAGAAGATGTTTTGACATCAAAATTTTGACGTCAAATAATGTGTTCTTTCGTTTTGATGTGTATTTTTAAAACGTGTGTATATTGCAGAAGATAAAAAGTAAGAAAGTTATTGATAAACATCTACGGTGTTGTGTATGGATCGAAATAACATAAATGTAAACAAAGACAATGAATATAGGTGAAAAGAATGCTTCAACTTTGTATATACAAACAGTACCTAACACATTCCTATGTTATGTGACAAATTATAGAAAACTAATTGGAGCAAGAATATTCAGCCAAAACTACGAATCACAATATGGAAAACTCAATCCCTCAAACCTCACAGCACGTGACTTTATTGGCCATGGCACACACACATTATCAACAGCAGCAGGTAACTTTTCACCTGATGTAACAATATTTGGCAACGGTAACGGCACAGCGAAAGGTGGTTCCCCTAGAGCACGTGTAGCATCCTACAAAGTATGTTGGTCAAAGACAGATGCAGGTGGATGTCATGAAGCTGATATTCTAGCAGCATTTGATCAAGCTATATATGATGGTGTTGATGTGATTTCAACTTCTTTGGGTGGTTCTAGTCCATATATTGAAGCTTTGTTTACTGATGGAATTTCAATTGGGTCATTTCATGCTGTTGCTAAGAATGTTGTGGTTGTTTGTTCTGCTGGAAATGATGGACCTGCTCCTAGGAGTGTTACAAATGTTGCACCTTGGTCTTTCACCGTTGCAGCTAGTACAATTGATAGGGAATTTGTCAGCCATATTTCTATTGGTAACAAAAATTACATAAAGGTATGAATAGTAATAAGGAGAGTTTAACAAGCATTTATACACACTCTTCACATTAAATTTTACAGAAACTTAATTTATTGGATCGTATTTCAGGGTGCCAGTCTTAGTAAAGGCTTACCATCAGGTCCATCCAAGAAAATATATCAAATGATTCATTCTATTGATGCTAGACTTCTTAATGCCACAATTCAAGATGCGTAAGTAGTAATTAATTCCCTAAACTTGCTTAAAAAAAAAAGATTTGTTATTAGATTATAAATTATAAATTTGTATAACTTGTGTTACATATATGTATGTGTTATTCCAGTCGTTTTTGCAAGGCTAAAACACTTGATCCTACCAAAGTAAAAGGAAAGATATTAGTTTGTACTCGACTTGAGGAAACAACGTCCGTTGCTCAAGGCTTTGAAGCTGCTCTTGCAGGGGCAGTAGGAGTTTTTGTGATCAATGACGAGAAAAGTGGAAGTTTACTTCTAGCTGAGCCTCATCCTTTACCTGGTGCAAGTATGGATGCCAATGAGGACGAGGATATCGATGAGCGTGAGTGGTTTGGAAAAGGTGGTACTGACGAAAACATTACCAGGTAAACTCATACGAGTTTAAAGACTATGCACTAACGGTGTAAAACAAATTTATACCGTCTTCAATCAGATTTCGCTATAATTATTTCTGAAATCATCTCAATAATTATTGTTTATTGAAATACTTTGTTTATTTATATTATAATGCAGGAAAATGGTTGCATACATGTCTGAAGCAAAAACATATACAGGATTAAAGCCATCTCCAATTATGGCTGGGTTTTCATCTAGGGGTCCTAGTGCAGTGCAACCATTAATACTCAAGGTATACAAACATTTTGTTTCATAATGTAATGAAAAAATTTCTAGTTGCGTCTACGGTGAGGATCAATATTTGAAAATCGTTGAAAACTCTAACATTAACAACGACTCATGCTGCTCCACATAAGTAGTAATATAGTATTACTCATACTTGCAACTGAGATGATGTCCCAATCGGCATCAGTTCGATAAAAAAAACAAGGAAAATGAATATTAATGCCTCAAAACTCAACTTATATTTCGTTTTCTCTTGTTTTTTTCAAATCAACACCGACGGATCACTGTCTCAGCCCTAAGGATGTGGAGGAACCTAAACTTTTATTGCGGCAACATTAATCATCTTTGGTATTTTGGTTGATTTTCAAGTATCAATCTAAAGTAGACTTTATGTGACACTTCAATTCTCTACCCTAGTGGCCACCTATTTTTCAATCCTACATTCAATGTCCACTCTTCTTCACTTATTTTGTTAATGCAATGCTTTTGTTTTATGTTTCAGCCTGACATAACTGCTCCTGGAGTGAACATATTGGCTGCTTATTCACTAGCCACCAGTCCATCGAATCTACCATCAGATACACGCCGCATTCCTTACAATCTGCAACAAGGAACTTCAATGTCTTGTCCTCATGTTGCTGGCATTGCTGGTCTTCTCAAGACACTTCATCCTAGTTGGAGCCCAGCTGCTATCAAATCTGCCATCATGACTACCGGTATCTTAGAAAATCAATATTTCAATATTGATACATGAAAATAAATTTATCATATAGATTATCCTTTTACCTAAATCAAAAACAAAATTTAGAAAATATGCATAATAATATCATAATATAACACCTGCAGTATATGTAGAAAAGTCAAAGATCACTCACTTTTAAGGGAAATGTTGTCCTTTTTGCAGCTACAACACTAGATAACAACAATCAACCAATCAGAGACGCGTTCGATAAGATAGCGACTCCATTTGAATATGGTTCTGGACATATTCAGCCTAACCTTGCAATGGATCCAGGACTTGTTTATGATCTAAGCACAAATGATTACTTGAACTTCATTTGTGTTTTTGGTCACAGTCACAATTTATTAAAGTTCTTTAATTACAACTCTTACATTTGTCCTGAGTTTTACAACATTGAAAACCTCAATTATCCTTCAATTACTGTGTATAATCGAGGACCGAACCTTATAAACGTTACTCGTACCGTCACAAATGTTGGGTCTCCTAGCACATATGTTGTGGAAATTCAACAACTTGAAGAATTTAAGGTTCATATTCAACCAAGTTCATTGACATTTAAGGAAATTGGAGAAAAGAAAACCTTTCAGATAATTCTAGAGGCAATAGGTATGCCTCCTCATGGTTTTCCAGTATTTGGGAAATTGACTTGGACAAATGGCAACCACAGAGTAACTAGTCCTATAGTAGTCTTGTAA
Protein sequence

>MS.gene81612.t1

MSYPITKLFLSSFILCSFLLEHTDALRKTYIVYLGGHSHGPNPSLDDLELATNSHYDLLASILGSHEKAKETVMYSYNKHINGFAALLEDEEASKIANNSNVVSVFLSKEYKLHTTRSWDFLGLEKDGGISLDSAWWKARFGEDSIIANLDSGVWPEHESFSGIGYGQVPSKWRGNGVCEIDHFITPSNTTFCNRKLIGARIFSQNYESQYGKLNPSNLTARDFIGHGTHTLSTAAGNFSPDVTIFGNGNGTAKGGSPRARVASYKVCWSKTDAGGCHEADILAAFDQAIYDGVDVISTSLGGSSPYIEALFTDGISIGSFHAVAKNVVVVCSAGNDGPAPRSVTNVAPWSFTVAASTIDREFVSHISIGNKNYIKGASLSKGLPSGPSKKIYQMIHSIDARLLNATIQDARFCKAKTLDPTKVKGKILVCTRLEETTSVAQGFEAALAGAVGVFVINDEKSGSLLLAEPHPLPGASMDANEDEDIDEREWFGKGGTDENITRKMVAYMSEAKTYTGLKPSPIMAGFSSRGPSAVQPLILKPDITAPGVNILAAYSLATSPSNLPSDTRRIPYNLQQGTSMSCPHVAGIAGLLKTLHPSWSPAAIKSAIMTTATTLDNNNQPIRDAFDKIATPFEYGSGHIQPNLAMDPGLVYDLSTNDYLNFICVFGHSHNLLKFFNYNSYICPEFYNIENLNYPSITVYNRGPNLINVTRTVTNVGSPSTYVVEIQQLEEFKVHIQPSSLTFKEIGEKKTFQIILEAIGMPPHGFPVFGKLTWTNGNHRVTSPIVVL