AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene057881

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene057881.t1 MTR_5g085690 96.578 789 27 0 1 789 1 789 0.0 1587
MS.gene057881.t1 MTR_7g081420 59.923 781 293 13 13 788 19 784 0.0 884
MS.gene057881.t1 MTR_7g081750 57.781 784 306 10 21 788 23 797 0.0 880
MS.gene057881.t1 MTR_7g081500 59.033 786 304 12 8 788 10 782 0.0 862
MS.gene057881.t1 MTR_7g081580 57.599 783 307 15 13 788 19 783 0.0 844
MS.gene057881.t1 MTR_7g081380 57.935 794 295 16 22 788 25 806 0.0 829
MS.gene057881.t1 MTR_7g481600 57.599 783 307 15 13 788 19 783 0.0 827
MS.gene057881.t1 MTR_5g096750 54.427 768 315 12 25 788 28 764 0.0 814
MS.gene057881.t1 MTR_3g061110 53.038 790 331 10 1 788 1 752 0.0 813
MS.gene057881.t1 MTR_4g103400 52.207 793 340 15 10 788 9 776 0.0 786
MS.gene057881.t1 MTR_4g103490 52.097 787 331 15 21 788 24 783 0.0 761
MS.gene057881.t1 MTR_4g103480 51.943 772 341 13 23 788 39 786 0.0 754
MS.gene057881.t1 MTR_4g103450 52.089 766 337 13 29 788 2 743 0.0 747
MS.gene057881.t1 MTR_3g082200 51.369 767 341 12 28 788 29 769 0.0 745
MS.gene057881.t1 MTR_4g134320 49.377 802 355 15 1 788 1 765 0.0 733
MS.gene057881.t1 MTR_4g103430 50.458 765 334 14 37 788 36 768 0.0 733
MS.gene057881.t1 MTR_4g103495 52.639 720 318 12 23 739 23 722 0.0 710
MS.gene057881.t1 MTR_7g098070 49.290 775 354 15 21 788 19 761 0.0 706
MS.gene057881.t1 MTR_3g082200 51.042 672 298 11 122 788 1 646 0.0 647
MS.gene057881.t1 MTR_3g082200 50.938 640 284 10 153 788 18 631 0.0 619
MS.gene057881.t1 MTR_4g103495 50.781 640 292 12 153 788 3 623 0.0 598
MS.gene057881.t1 MTR_5g055920 48.841 647 304 12 147 788 42 666 0.0 580
MS.gene057881.t1 MTR_4g073540 42.219 739 376 19 70 788 60 767 0.0 554
MS.gene057881.t1 MTR_5g016120 40.898 802 416 21 1 787 1 759 3.73e-179 533
MS.gene057881.t1 MTR_4g095360 39.898 787 416 20 13 788 14 754 8.54e-179 531
MS.gene057881.t1 MTR_1g102350 40.625 800 428 20 1 788 12 776 2.52e-177 529
MS.gene057881.t1 MTR_4g053630 42.436 780 374 24 30 788 4 729 3.43e-175 521
MS.gene057881.t1 MTR_0047s0120 40.151 797 418 20 4 786 3 754 2.42e-172 515
MS.gene057881.t1 MTR_3g102810 39.719 783 409 21 21 786 16 752 1.03e-171 513
MS.gene057881.t1 MTR_2g042130 39.334 811 412 26 10 786 6 770 9.85e-171 511
MS.gene057881.t1 MTR_8g072440 40.206 776 393 23 28 788 33 752 4.89e-165 496
MS.gene057881.t1 MTR_5g025010 40.750 773 396 25 28 788 27 749 2.42e-164 494
MS.gene057881.t1 MTR_8g072440 40.505 753 384 21 50 788 8 710 5.53e-164 492
MS.gene057881.t1 MTR_7g075900 40.990 727 383 21 73 788 80 771 5.89e-164 494
MS.gene057881.t1 MTR_1g018510 38.881 751 405 18 55 786 8 723 9.11e-164 492
MS.gene057881.t1 MTR_5g025010 40.629 763 393 24 38 788 3 717 2.31e-161 486
MS.gene057881.t1 MTR_2g018135 40.075 801 396 24 28 788 26 782 3.66e-161 487
MS.gene057881.t1 MTR_8g042670 38.860 772 424 16 23 788 28 757 1.38e-159 482
MS.gene057881.t1 MTR_8g033150 38.175 778 390 22 30 788 19 724 5.25e-159 479
MS.gene057881.t1 MTR_2g018125 39.549 799 403 21 28 788 27 783 8.65e-159 481
MS.gene057881.t1 MTR_8g033150 38.175 778 390 22 30 788 46 751 1.88e-158 479
MS.gene057881.t1 MTR_7g098630 38.710 775 422 18 29 789 26 761 3.78e-158 482
MS.gene057881.t1 MTR_3g104930 39.637 772 409 20 28 788 36 761 4.20e-158 478
MS.gene057881.t1 MTR_4g125180 38.035 794 421 25 8 786 12 749 1.14e-156 474
MS.gene057881.t1 MTR_8g079900 38.065 775 400 22 27 788 34 741 1.31e-156 474
MS.gene057881.t1 MTR_8g022870 38.462 780 431 19 27 788 27 775 2.18e-156 474
MS.gene057881.t1 MTR_4g053635 41.460 726 347 23 87 788 1 672 1.19e-154 467
MS.gene057881.t1 MTR_4g053630 42.693 698 331 22 112 788 3 652 4.87e-154 464
MS.gene057881.t1 MTR_8g083220 39.075 778 408 22 30 788 44 774 1.54e-153 467
MS.gene057881.t1 MTR_3g114420 37.892 797 436 18 8 788 11 764 1.51e-152 464
MS.gene057881.t1 MTR_8g042710 37.194 777 443 17 24 788 20 763 1.86e-151 461
MS.gene057881.t1 MTR_8g021130 38.912 735 393 22 72 786 74 772 1.15e-150 460
MS.gene057881.t1 MTR_6g055570 37.717 806 402 26 3 788 4 729 1.94e-145 444
MS.gene057881.t1 MTR_7g075890 36.727 776 403 22 30 788 193 897 2.91e-144 447
MS.gene057881.t1 MTR_7g034380 38.184 749 381 23 52 788 13 691 3.84e-144 440
MS.gene057881.t1 MTR_6g055410 37.079 801 396 27 3 788 4 711 5.93e-144 440
MS.gene057881.t1 MTR_1g007030 36.080 801 423 24 1 788 8 732 6.42e-144 441
MS.gene057881.t1 MTR_1g048110 35.866 803 420 25 1 788 8 730 1.01e-143 440
MS.gene057881.t1 MTR_1g006990 36.364 792 421 24 8 788 15 734 7.29e-143 438
MS.gene057881.t1 MTR_8g006680 37.692 780 393 26 20 788 25 722 9.96e-143 437
MS.gene057881.t1 MTR_8g005300 37.692 780 393 26 20 788 25 722 9.96e-143 437
MS.gene057881.t1 MTR_8g005640 37.692 780 393 26 20 788 25 722 9.96e-143 437
MS.gene057881.t1 MTR_7g104200 36.701 782 407 21 27 789 30 742 4.25e-141 434
MS.gene057881.t1 MTR_8g024380 39.213 737 371 20 73 788 78 758 1.07e-139 431
MS.gene057881.t1 MTR_1g078110 36.242 825 417 25 1 788 1 753 3.82e-139 429
MS.gene057881.t1 MTR_8g005710 37.052 753 391 25 52 788 13 698 5.32e-139 427
MS.gene057881.t1 MTR_3g010080 36.453 812 396 29 8 788 9 731 5.27e-138 426
MS.gene057881.t1 MTR_8g079900 38.000 700 361 20 102 788 4 643 7.80e-138 422
MS.gene057881.t1 MTR_8g024390 39.510 734 379 22 73 788 71 757 1.02e-137 426
MS.gene057881.t1 MTR_8g024420 38.024 739 381 20 73 788 37 721 1.63e-137 424
MS.gene057881.t1 MTR_3g464790 37.783 794 406 22 9 788 12 731 1.86e-137 424
MS.gene057881.t1 MTR_4g102400 37.484 771 416 22 28 788 38 752 8.84e-136 420
MS.gene057881.t1 MTR_8g042670 39.043 648 354 14 147 788 21 633 9.32e-132 406
MS.gene057881.t1 MTR_2g049200 38.231 735 385 18 73 788 71 755 2.25e-129 404
MS.gene057881.t1 MTR_1g079120 35.352 809 447 25 1 788 7 760 2.42e-128 401
MS.gene057881.t1 MTR_5g011340 36.025 805 444 17 1 789 2 751 4.40e-128 400
MS.gene057881.t1 MTR_7g079300 35.714 798 428 27 22 788 22 765 9.68e-128 400
MS.gene057881.t1 MTR_5g011190 35.849 795 434 18 13 789 18 754 1.09e-126 397
MS.gene057881.t1 MTR_8g024370 36.863 746 413 18 59 788 53 756 1.61e-126 396
MS.gene057881.t1 MTR_7g118080 37.178 737 384 23 73 788 77 755 9.34e-126 394
MS.gene057881.t1 MTR_3g114410 40.589 611 316 16 8 612 11 580 1.03e-125 389
MS.gene057881.t1 MTR_5g011370 35.472 795 437 18 13 789 38 774 1.19e-124 392
MS.gene057881.t1 MTR_5g011310 36.066 793 435 19 13 789 18 754 3.27e-124 390
MS.gene057881.t1 MTR_7g079310 34.719 818 432 29 8 788 11 763 3.03e-123 388
MS.gene057881.t1 MTR_5g011320 36.146 794 429 20 13 789 14 746 4.12e-123 387
MS.gene057881.t1 MTR_2g044630 34.586 798 405 27 5 788 11 705 6.80e-122 383
MS.gene057881.t1 MTR_5g011270 36.245 767 421 17 29 789 48 752 1.40e-120 381
MS.gene057881.t1 MTR_5g011260 35.640 766 427 16 29 789 48 752 1.91e-119 377
MS.gene057881.t1 MTR_5g011280 35.521 777 434 19 20 789 40 756 5.29e-117 371
MS.gene057881.t1 MTR_8g042710 38.127 598 332 13 24 614 20 586 1.51e-113 360
MS.gene057881.t1 MTR_4g071560 39.065 599 284 11 47 635 10 537 4.63e-107 338
MS.gene057881.t1 MTR_2g042640 36.041 677 319 21 77 750 46 611 5.43e-107 340
MS.gene057881.t1 MTR_6g075370 32.852 761 373 22 10 753 15 654 1.88e-103 333
MS.gene057881.t1 MTR_3g452290 34.827 692 319 24 102 788 4 568 2.73e-103 330
MS.gene057881.t1 MTR_3g451220 34.827 692 319 24 102 788 4 568 2.73e-103 330
MS.gene057881.t1 MTR_4g127480 34.015 782 425 34 55 787 73 812 4.32e-98 323
MS.gene057881.t1 MTR_2g037850 33.957 748 412 30 55 757 73 783 7.31e-93 309
MS.gene057881.t1 MTR_2g046740 32.391 778 457 30 52 789 91 839 1.84e-81 278
MS.gene057881.t1 MTR_4g132620 31.658 796 455 30 8 750 19 778 5.81e-80 274
MS.gene057881.t1 MTR_8g089230 31.443 776 460 29 55 789 102 846 3.99e-78 270
MS.gene057881.t1 MTR_2g042650 35.659 516 255 14 289 788 188 642 7.60e-78 264
MS.gene057881.t1 MTR_8g027260 40.306 392 191 14 5 394 12 362 8.22e-75 256
MS.gene057881.t1 MTR_8g027260 41.667 276 147 5 519 788 384 651 1.32e-61 220
MS.gene057881.t1 MTR_5g081100 33.140 516 252 13 28 541 2 426 2.21e-70 238
MS.gene057881.t1 MTR_7g079295 37.228 368 186 13 22 371 22 362 2.27e-56 202
MS.gene057881.t1 MTR_7g079295 38.667 150 82 7 646 788 363 509 1.24e-14 77.8
MS.gene057881.t1 MTR_3g114160 36.522 345 153 9 65 407 2 282 1.56e-52 187
MS.gene057881.t1 MTR_5g081280 37.391 345 152 13 26 367 18 301 1.21e-51 182
MS.gene057881.t1 MTR_7g081660 52.778 180 82 3 611 788 374 552 6.71e-44 168
MS.gene057881.t1 MTR_3g114140 38.800 250 140 6 506 746 176 421 1.41e-42 160
MS.gene057881.t1 MTR_3g114140 43.312 157 59 1 220 376 28 154 6.64e-27 114
MS.gene057881.t1 MTR_8g092940 38.397 237 112 8 71 305 26 230 4.66e-37 139
MS.gene057881.t1 MTR_2g070260 38.725 204 110 6 581 778 1 195 3.80e-35 133
MS.gene057881.t1 MTR_2g070250 42.328 189 85 5 165 353 101 265 4.10e-33 132
MS.gene057881.t1 MTR_5g044060 50.000 134 65 1 509 640 1 134 4.72e-31 120
MS.gene057881.t1 MTR_4g126230 34.158 202 120 3 521 717 55 248 2.66e-28 114
MS.gene057881.t1 MTR_4g053665 35.857 251 118 9 540 788 1 210 1.54e-27 111
MS.gene057881.t1 MTR_5g081130 34.568 162 97 6 634 789 15 173 4.46e-18 84.0
MS.gene057881.t1 MTR_5g011300 48.810 84 43 0 581 664 1 84 8.72e-16 73.9
MS.gene057881.t1 MTR_3g005755 45.882 85 44 2 559 641 224 308 1.28e-13 73.2
MS.gene057881.t1 MTR_5g079315 50.000 74 36 1 288 360 1 74 1.98e-13 66.6
MS.gene057881.t1 MTR_3g083490 56.452 62 25 1 311 370 16 77 1.46e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene057881.t1 AT2G04160 51.309 764 344 12 29 788 31 770 0.0 764
MS.gene057881.t1 AT5G59810 50.585 769 344 11 25 788 37 774 0.0 733
MS.gene057881.t1 AT5G67360 41.310 794 408 22 9 788 5 754 0.0 545
MS.gene057881.t1 AT2G05920 40.816 784 394 23 18 786 19 747 7.52e-173 516
MS.gene057881.t1 AT4G34980 38.462 806 421 23 5 788 6 758 2.14e-172 515
MS.gene057881.t1 AT5G51750 39.103 803 437 20 4 788 6 774 3.62e-166 500
MS.gene057881.t1 AT5G45650 39.500 800 411 22 27 788 24 788 1.79e-164 496
MS.gene057881.t1 AT5G45650 39.500 800 411 22 27 788 24 788 1.79e-164 496
MS.gene057881.t1 AT3G14240 38.273 776 430 19 29 788 27 769 5.56e-163 491
MS.gene057881.t1 AT3G14067 38.184 804 428 26 8 788 10 767 7.54e-161 486
MS.gene057881.t1 AT1G20160 37.927 791 432 18 13 788 15 761 6.29e-158 478
MS.gene057881.t1 AT1G20160 39.477 727 397 15 73 788 28 722 8.95e-157 474
MS.gene057881.t1 AT1G20150 39.409 779 411 23 30 788 33 770 9.17e-155 470
MS.gene057881.t1 AT5G59100 38.987 790 380 27 21 788 28 737 2.76e-154 468
MS.gene057881.t1 AT1G01900 39.918 729 389 17 73 788 79 771 1.74e-153 467
MS.gene057881.t1 AT5G58830 38.065 796 372 24 8 788 16 705 3.75e-153 464
MS.gene057881.t1 AT5G59120 38.610 777 384 22 27 788 29 727 1.07e-152 463
MS.gene057881.t1 AT4G10520 37.750 800 422 23 6 788 4 744 2.05e-150 458
MS.gene057881.t1 AT5G59090 38.551 773 396 23 24 788 27 728 2.37e-150 457
MS.gene057881.t1 AT5G59130 38.413 794 402 24 2 788 12 725 2.79e-150 457
MS.gene057881.t1 AT5G59090 38.551 773 394 24 24 788 27 726 4.30e-149 454
MS.gene057881.t1 AT5G59090 38.422 773 392 23 24 788 27 723 5.37e-149 454
MS.gene057881.t1 AT4G10550 37.189 804 441 20 3 788 9 766 1.07e-148 454
MS.gene057881.t1 AT5G59130 37.909 794 396 23 2 788 12 715 1.34e-148 452
MS.gene057881.t1 AT5G59130 38.413 794 398 25 2 788 12 721 1.50e-148 453
MS.gene057881.t1 AT1G32940 38.432 778 419 22 28 788 28 762 1.50e-148 454
MS.gene057881.t1 AT4G10550 37.595 790 429 20 17 788 39 782 1.72e-148 454
MS.gene057881.t1 AT5G03620 38.358 816 406 26 7 789 8 759 1.97e-148 454
MS.gene057881.t1 AT5G59130 39.373 734 366 20 66 788 21 686 3.00e-147 448
MS.gene057881.t1 AT1G04110 36.194 804 454 18 7 788 4 770 1.97e-146 449
MS.gene057881.t1 AT4G00230 38.752 769 398 22 30 788 38 743 2.10e-146 448
MS.gene057881.t1 AT1G32950 37.707 785 430 21 20 788 20 761 4.57e-146 447
MS.gene057881.t1 AT1G32960 37.516 781 422 22 28 788 31 765 6.20e-146 447
MS.gene057881.t1 AT5G59190 38.537 711 362 19 55 757 15 658 6.55e-146 444
MS.gene057881.t1 AT5G58840 37.201 793 399 19 2 788 7 706 1.21e-145 444
MS.gene057881.t1 AT4G26330 39.569 743 398 18 65 789 13 722 1.50e-145 445
MS.gene057881.t1 AT3G46840 37.814 796 420 25 1 788 6 734 1.80e-144 442
MS.gene057881.t1 AT3G46850 38.630 774 399 26 24 788 28 734 2.89e-143 439
MS.gene057881.t1 AT5G58820 37.887 776 366 21 27 788 27 700 6.68e-142 434
MS.gene057881.t1 AT1G32940 38.369 748 407 21 58 788 1 711 7.29e-142 435
MS.gene057881.t1 AT1G32940 38.369 748 407 21 58 788 1 711 7.29e-142 435
MS.gene057881.t1 AT4G26330 38.838 757 398 19 65 789 13 736 1.04e-141 436
MS.gene057881.t1 AT4G10550 37.250 749 413 18 58 788 1 710 1.18e-139 429
MS.gene057881.t1 AT4G10550 37.250 749 413 18 58 788 1 710 1.18e-139 429
MS.gene057881.t1 AT1G32950 37.885 747 411 20 58 788 1 710 2.96e-139 428
MS.gene057881.t1 AT4G10510 36.086 787 445 20 17 788 22 765 2.32e-137 425
MS.gene057881.t1 AT1G66210 35.995 789 418 23 19 788 30 750 4.87e-137 424
MS.gene057881.t1 AT4G10540 35.625 800 433 22 17 788 18 763 8.40e-137 424
MS.gene057881.t1 AT4G21650 37.909 794 395 28 24 788 36 760 9.95e-137 423
MS.gene057881.t1 AT4G21630 36.732 814 417 27 6 788 7 753 2.62e-136 422
MS.gene057881.t1 AT4G10530 35.910 802 433 22 1 788 1 735 5.28e-136 421
MS.gene057881.t1 AT4G10510 36.176 774 436 20 30 788 23 753 6.72e-136 421
MS.gene057881.t1 AT5G11940 36.061 782 414 21 28 788 36 752 1.53e-135 420
MS.gene057881.t1 AT5G45640 36.891 759 383 20 81 788 38 751 1.91e-130 406
MS.gene057881.t1 AT4G10510 35.925 746 426 19 58 788 1 709 1.24e-129 403
MS.gene057881.t1 AT1G66220 36.005 786 405 22 26 788 34 744 6.13e-129 402
MS.gene057881.t1 AT4G10510 35.705 731 418 19 73 788 1 694 4.98e-125 391
MS.gene057881.t1 AT5G03620 40.097 616 311 17 7 612 8 575 1.44e-121 377
MS.gene057881.t1 AT1G32940 39.478 613 324 16 28 630 28 603 7.38e-120 374
MS.gene057881.t1 AT1G32970 35.108 789 421 26 15 788 10 722 1.48e-118 375
MS.gene057881.t1 AT4G15040 35.618 744 395 23 55 788 16 685 3.12e-117 370
MS.gene057881.t1 AT4G15040 35.618 744 395 23 55 788 16 685 3.12e-117 370
MS.gene057881.t1 AT4G21323 34.943 787 406 25 30 786 81 791 4.94e-115 367
MS.gene057881.t1 AT4G00230 40.136 588 296 15 30 615 38 571 2.24e-114 359
MS.gene057881.t1 AT4G21326 32.710 749 424 20 58 788 1 687 1.32e-109 350
MS.gene057881.t1 AT5G58840 37.807 611 294 14 2 612 7 531 4.87e-109 344
MS.gene057881.t1 AT5G67090 34.413 741 371 25 70 777 57 715 5.05e-109 350
MS.gene057881.t1 AT1G30600 32.650 781 445 28 55 789 82 827 9.43e-96 317
MS.gene057881.t1 AT4G30020 32.868 788 430 32 56 789 70 812 2.22e-95 315
MS.gene057881.t1 AT4G30020 32.868 788 430 32 56 789 70 812 2.22e-95 315
MS.gene057881.t1 AT4G30020 32.868 788 430 32 56 789 70 812 2.22e-95 315
MS.gene057881.t1 AT4G30020 32.868 788 430 32 56 789 70 812 2.22e-95 315
MS.gene057881.t1 AT2G19170 32.908 784 434 36 56 789 70 811 1.41e-94 313
MS.gene057881.t1 AT2G19170 32.908 784 434 36 56 789 70 811 1.41e-94 313
MS.gene057881.t1 AT1G20160 36.262 535 294 12 13 541 15 508 1.04e-88 290
MS.gene057881.t1 AT4G20430 31.607 753 436 26 53 759 101 820 1.12e-87 296
MS.gene057881.t1 AT4G20430 31.607 753 436 26 53 759 101 820 1.12e-87 296
MS.gene057881.t1 AT4G20430 31.267 742 429 24 53 759 101 796 2.01e-85 289
MS.gene057881.t1 AT2G39850 30.760 829 417 38 27 788 27 765 9.41e-85 286
MS.gene057881.t1 AT5G44530 31.322 779 461 27 53 789 88 834 1.23e-83 284
MS.gene057881.t1 AT1G62340 32.656 689 394 23 55 700 82 743 3.24e-81 278
MS.gene057881.t1 AT5G44530 30.348 804 461 28 53 789 88 859 1.37e-78 271
MS.gene057881.t1 AT4G21640 41.026 390 196 12 8 380 20 392 9.51e-78 266
MS.gene057881.t1 AT4G21640 41.554 296 151 9 502 788 445 727 7.16e-50 187
MS.gene057881.t1 AT5G58840 39.312 407 207 10 2 408 7 373 1.09e-74 251
MS.gene057881.t1 AT5G44530 31.608 541 317 19 52 562 87 604 2.40e-53 196
MS.gene057881.t1 AT1G32980 40.526 190 108 4 575 760 1 189 1.20e-33 128
MS.gene057881.t1 AT5G59110 36.025 161 94 5 636 788 7 166 1.83e-23 98.6

Find 167 sgRNAs with CRISPR-Local

Find 267 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAACAACTTGAAGAATTTA+AGG 0.116991 5.3:-69338520 MS.gene057881:CDS
GGCTTTGAAGCTGCTCTTGC+AGG 0.182619 5.3:-69340254 MS.gene057881:CDS
CTCACAGCACGTGACTTTAT+TGG 0.216825 5.3:-69341154 MS.gene057881:CDS
AGCACATGCTTACCTTTCTA+AGG 0.225071 5.3:+69343196 None:intergenic
GATTTACTTGCTTCAATCTT+AGG 0.232077 5.3:-69342982 MS.gene057881:CDS
CCTCATGTTGCTGGCATTGC+TGG 0.232103 5.3:-69339176 MS.gene057881:CDS
TTGTATACCTTGAGTATTAA+TGG 0.240342 5.3:+69339785 None:intergenic
TTATCAAATGCGTCTCTAAT+TGG 0.241063 5.3:+69338837 None:intergenic
TCCTTTACCTGGTGCAAGTA+TGG 0.254370 5.3:-69340168 MS.gene057881:CDS
TGATGTGATTTCAACTTCTT+TGG 0.256845 5.3:-69340927 MS.gene057881:CDS
GAAAACCTTTCAGATAATTC+TGG 0.261736 5.3:-69338451 MS.gene057881:CDS
GATGAAAACCCAGCCATAAT+TGG 0.268338 5.3:+69339830 None:intergenic
GTGAACAAAGCTTCAATATA+TGG 0.271746 5.3:+69340893 None:intergenic
ATCATTGCTAATTTAGATTC+AGG 0.275726 5.3:-69342545 MS.gene057881:intron
CTTTGACCAACATACTTTGT+AGG 0.283223 5.3:+69341018 None:intergenic
ACAAATTATAGAAAACTAAT+TGG 0.289969 5.3:-69341235 MS.gene057881:intron
CGTATTGTGATTCGTAGTTT+TGG 0.291444 5.3:+69341197 None:intergenic
CTTGATCCTACCAAAGTAAA+AGG 0.293474 5.3:-69340326 MS.gene057881:CDS
ACAAGGTCATGGGACTTTCT+TGG 0.296242 5.3:-69342635 MS.gene057881:CDS
TCACCTGATGTAACAATATT+CGG 0.298451 5.3:-69341091 MS.gene057881:CDS
TCTTACAATAAGCATATAAA+TGG 0.304355 5.3:-69342848 MS.gene057881:CDS
AGTTTCAGTGGCATTGGATA+TGG 0.305789 5.3:-69342273 MS.gene057881:CDS
ATATCGACTCCATTTGAATA+TGG 0.306553 5.3:-69338813 MS.gene057881:CDS
TTCACTGATGGAATTTCAAT+TGG 0.310273 5.3:-69340875 MS.gene057881:CDS
GTTGTAGTTGTTTGTTCTGC+TGG 0.315492 5.3:-69340827 MS.gene057881:CDS
ATTAAAGCCATCTCCAATTA+TGG 0.319155 5.3:-69339843 MS.gene057881:CDS
TTTGTTAGTCATATTTCTAT+TGG 0.336827 5.3:-69340722 MS.gene057881:CDS
ATGTCTTGTCCTCATGTTGC+TGG 0.337178 5.3:-69339185 MS.gene057881:CDS
CTGTACGAGTAGCGTTTATA+AGG 0.339861 5.3:+69338583 None:intergenic
AGATCATCAAGGGAGGGATT+TGG 0.343007 5.3:+69343030 None:intergenic
AAATGATTGCTGCAGGAAAA+TGG 0.349570 5.3:-69339900 MS.gene057881:intron
CAAGTCAATTTCCCAAATAC+TGG 0.351450 5.3:+69338399 None:intergenic
ACTCCATTTGAATATGGTTC+TGG 0.353443 5.3:-69338807 MS.gene057881:CDS
CAGATAATTCTGGAGGCAAT+AGG 0.357573 5.3:-69338441 MS.gene057881:CDS
TTGCAGCTAGTACAATTGAT+AGG 0.366041 5.3:-69340748 MS.gene057881:CDS
CGAGTAGCGTTTATAAGGTT+TGG 0.371647 5.3:+69338588 None:intergenic
TCCTGTATATGTTCTTGCTT+CGG 0.373252 5.3:+69339865 None:intergenic
CATCAAAATGGCGTGGGAAT+GGG 0.373921 5.3:-69342242 MS.gene057881:CDS
GTTCCTTGTTGTAGATTGTA+AGG 0.377276 5.3:+69339212 None:intergenic
CCACTGAAACTTTCATGTTC+CGG 0.386600 5.3:+69342285 None:intergenic
GAATTTCTCTTGATTCTGCT+TGG 0.392718 5.3:-69342595 MS.gene057881:CDS
GGGAAATTGACTTGGACAAA+TGG 0.397704 5.3:-69338390 MS.gene057881:CDS
CCATCAAAATGGCGTGGGAA+TGG 0.411213 5.3:-69342243 MS.gene057881:CDS
GCTTGGTGGAAGGCAAGATT+TGG 0.411231 5.3:-69342578 MS.gene057881:CDS
GATGTGATTTCAACTTCTTT+GGG 0.412723 5.3:-69340926 MS.gene057881:CDS
CTGTTTCCTTTGCCTTCTCA+TGG 0.416029 5.3:+69342879 None:intergenic
ACAAATGAAGTTCAAGTAAT+CGG 0.419419 5.3:+69338728 None:intergenic
TCAAGACACTTCATCCTAGT+TGG 0.424943 5.3:-69339148 MS.gene057881:CDS
GTTTGTTCTGCTGGGAATGA+TGG 0.430494 5.3:-69340818 MS.gene057881:CDS
CATGAAAGTTTCAGTGGCAT+TGG 0.431620 5.3:-69342279 MS.gene057881:CDS
TCCTTAAAAGTCAATGAACT+TGG 0.434930 5.3:+69338486 None:intergenic
TGCGTCTCTAATTGGTTGAT+TGG 0.439420 5.3:+69338845 None:intergenic
CCTAACCTTGCAATGGATCC+AGG 0.444320 5.3:-69338774 MS.gene057881:CDS
TCACGTGCTGTGAGGTTTGA+GGG 0.445205 5.3:+69341163 None:intergenic
TGAGCTTACAAGACTACTAT+AGG 0.446634 5.3:+69338348 None:intergenic
CAGTATTTGGGAAATTGACT+TGG 0.447547 5.3:-69338398 MS.gene057881:CDS
TTGCAAAATGTTGTATTTGA+AGG 0.451939 5.3:+69342192 None:intergenic
TAAATCATAATGTGAATTTG+TGG 0.457110 5.3:+69342999 None:intergenic
ATTGAAGCTTTGTTCACTGA+TGG 0.459805 5.3:-69340887 MS.gene057881:CDS
AAGCCATCTCCAATTATGGC+TGG 0.460623 5.3:-69339839 MS.gene057881:CDS
GTCGATGACCGTGAGTGGTT+TGG 0.460744 5.3:-69340125 MS.gene057881:CDS
TCCATACTTGCACCAGGTAA+AGG 0.463638 5.3:+69340167 None:intergenic
GTCATGGGACTTTCTTGGAC+TGG 0.470096 5.3:-69342630 MS.gene057881:CDS
TTGCCGAATATTGTTACATC+AGG 0.471070 5.3:+69341088 None:intergenic
TTTCTCTTGATTCTGCTTGG+TGG 0.474583 5.3:-69342592 MS.gene057881:CDS
GTAGACATATATTGTATACT+TGG 0.475700 5.3:-69343070 MS.gene057881:intron
CTTATATCATAAACGAGTCC+TGG 0.479298 5.3:+69338756 None:intergenic
TCTTGATTCTGCTTGGTGGA+AGG 0.479653 5.3:-69342588 MS.gene057881:CDS
ATGGTCAAGTGCCATCAAAA+TGG 0.479711 5.3:-69342254 MS.gene057881:CDS
TCCGAAGCAAGAACATATAC+AGG 0.479713 5.3:-69339866 MS.gene057881:CDS
GCTGCTCTTGCAGGAGCTGT+AGG 0.480239 5.3:-69340245 MS.gene057881:CDS
AGTCATGATAGCAGATTTGA+TGG 0.484459 5.3:+69339115 None:intergenic
TTGTAGTTGTTTGTTCTGCT+GGG 0.485070 5.3:-69340826 MS.gene057881:CDS
ATCAAAATGGCGTGGGAATG+GGG 0.486112 5.3:-69342241 MS.gene057881:CDS
ACAATATTCGGCAACGGTAA+CGG 0.486416 5.3:-69341079 MS.gene057881:CDS
CAGCCTGACATAACTGCTCC+TGG 0.491410 5.3:-69339305 MS.gene057881:CDS
CGATTATACACAGTAATTGA+AGG 0.493869 5.3:+69338615 None:intergenic
ATAGCAGATTTGATGGCAGC+TGG 0.494167 5.3:+69339122 None:intergenic
GTGATCAATGATGAGAAAAG+TGG 0.495030 5.3:-69340215 MS.gene057881:CDS
TCACTGATGGAATTTCAATT+GGG 0.496395 5.3:-69340874 MS.gene057881:CDS
TGCTCCTGGAGTGAACATAT+TGG 0.499041 5.3:-69339291 MS.gene057881:CDS
CTTAGTAAAGGCTTACCATC+AGG 0.502950 5.3:-69340586 MS.gene057881:CDS
TGTCCAGAACCATATTCAAA+TGG 0.505775 5.3:+69338804 None:intergenic
GTCACGTGCTGTGAGGTTTG+AGG 0.515710 5.3:+69341162 None:intergenic
GCTACATTTGTAACACTCCT+AGG 0.517561 5.3:+69340788 None:intergenic
CTGCTCTTGCAGGAGCTGTA+GGG 0.519097 5.3:-69340244 MS.gene057881:CDS
TAGACATATATTGTATACTT+GGG 0.521854 5.3:-69343069 MS.gene057881:CDS
TGTTGAAACAGGCGTTTGGC+CGG 0.521908 5.3:-69342304 MS.gene057881:intron
CTCGTACAGTCACAAATGTC+GGG 0.522032 5.3:-69338569 MS.gene057881:CDS
AACGGTAACGGCACAGCGAA+AGG 0.522680 5.3:-69341067 MS.gene057881:CDS
TACTTACGCATCTTGAATTG+TGG 0.522759 5.3:+69340507 None:intergenic
TTTGATCAAGCTATATATGA+TGG 0.524554 5.3:-69340953 MS.gene057881:CDS
TGTTGGTCAAAGACAGATGC+AGG 0.529348 5.3:-69341007 MS.gene057881:CDS
TTGTTGTTGAAACAGGCGTT+TGG 0.530752 5.3:-69342308 MS.gene057881:intron
ACTCCAGGAGCAGTTATGTC+AGG 0.531162 5.3:+69339302 None:intergenic
CAGTAATTGAAGGATAATTG+AGG 0.532746 5.3:+69338625 None:intergenic
CAGGGTGCTAGTCTTAGTAA+AGG 0.532792 5.3:-69340598 MS.gene057881:CDS
GGAATGATGGACCTGCTCCT+AGG 0.534891 5.3:-69340805 MS.gene057881:CDS
GCTGAGCCTCATCCTTTACC+TGG 0.535200 5.3:-69340179 MS.gene057881:CDS
TAGGATGCTACACGTGCTCT+AGG 0.537953 5.3:+69341037 None:intergenic
GTGATTTCAACTTCTTTGGG+TGG 0.540742 5.3:-69340923 MS.gene057881:CDS
CCTGGATCCATTGCAAGGTT+AGG 0.540809 5.3:+69338774 None:intergenic
ATGGCAGCTGGACTCCAACT+AGG 0.543724 5.3:+69339134 None:intergenic
CAAAACTACGAATCACAATA+CGG 0.546962 5.3:-69341196 MS.gene057881:CDS
GACCGTGAGTGGTTTGGAAA+AGG 0.547443 5.3:-69340119 MS.gene057881:CDS
GTCTCCTAGCACATATGTTG+TGG 0.548425 5.3:-69338547 MS.gene057881:CDS
GCACGTGACTTTATTGGCCA+TGG 0.550564 5.3:-69341148 MS.gene057881:CDS
AAATCTGCTATCATGACTAC+CGG 0.552663 5.3:-69339110 MS.gene057881:intron
ACACACTGATGCCCTTAGAA+AGG 0.552985 5.3:-69343208 MS.gene057881:intron
TACTTGCTTCAATCTTAGGA+AGG 0.554717 5.3:-69342978 MS.gene057881:intron
AATATAAATTGCACACTACA+AGG 0.554754 5.3:-69342652 MS.gene057881:CDS
AATTGCACACTACAAGGTCA+TGG 0.556893 5.3:-69342646 MS.gene057881:CDS
TGCAGCTAGTACAATTGATA+GGG 0.556954 5.3:-69340747 MS.gene057881:CDS
TTGATAATGTGTGTGTGCCA+TGG 0.557883 5.3:+69341131 None:intergenic
ATTAATGGTTGCACTGCACT+AGG 0.559723 5.3:+69339800 None:intergenic
TTGATTGGTGTTATCTAGTG+TGG 0.560909 5.3:+69338860 None:intergenic
GTATCTGATGGTAGATTCGA+TGG 0.562511 5.3:+69339245 None:intergenic
GCAGCCAATATGTTCACTCC+AGG 0.562565 5.3:+69339287 None:intergenic
TGCACTGCTTGAAGATGAAG+AGG 0.564011 5.3:-69342819 MS.gene057881:CDS
AGCCATCTCCAATTATGGCT+GGG 0.565576 5.3:-69339838 MS.gene057881:CDS
GCACATGCTTACCTTTCTAA+GGG 0.568241 5.3:+69343197 None:intergenic
ATTTCCACAACATATGTGCT+AGG 0.568399 5.3:+69338543 None:intergenic
TGCCTCCAGAATTATCTGAA+AGG 0.572152 5.3:+69338446 None:intergenic
ACTCGTACAGTCACAAATGT+CGG 0.572724 5.3:-69338570 MS.gene057881:CDS
CACACATTATCAACAGCAGC+AGG 0.573163 5.3:-69341121 MS.gene057881:CDS
CTTGCACCAGGTAAAGGATG+AGG 0.584748 5.3:+69340173 None:intergenic
AACCCAGCCATAATTGGAGA+TGG 0.588591 5.3:+69339836 None:intergenic
TTTGTAACACTCCTAGGAGC+AGG 0.589076 5.3:+69340794 None:intergenic
TGGCTAACTCAAGATCATCA+AGG 0.591215 5.3:+69343019 None:intergenic
AACCTTTCAGATAATTCTGG+AGG 0.595949 5.3:-69338448 MS.gene057881:CDS
TGATGGTAGATTCGATGGAC+TGG 0.597441 5.3:+69339250 None:intergenic
TATTCAGCCTAACCTTGCAA+TGG 0.600414 5.3:-69338781 MS.gene057881:CDS
ATTGCACACTACAAGGTCAT+GGG 0.603683 5.3:-69342645 MS.gene057881:CDS
TGCAAGTATGGATGCTAATG+AGG 0.604780 5.3:-69340156 MS.gene057881:CDS
AAGTGCCATCAAAATGGCGT+GGG 0.606220 5.3:-69342248 MS.gene057881:CDS
TAGCATCCTACAAAGTATGT+TGG 0.610569 5.3:-69341024 MS.gene057881:CDS
GCAATAGGTATGCCTCCTCA+TGG 0.611238 5.3:-69338426 MS.gene057881:CDS
TGGTAGATTCGATGGACTGG+TGG 0.611336 5.3:+69339253 None:intergenic
CAAGTGCCATCAAAATGGCG+TGG 0.613735 5.3:-69342249 MS.gene057881:CDS
CCGGAACATGAAAGTTTCAG+TGG 0.614835 5.3:-69342285 MS.gene057881:CDS
GGCTAACTCAAGATCATCAA+GGG 0.615881 5.3:+69343020 None:intergenic
TACTTGGGAGGACATTCTCA+TGG 0.617129 5.3:-69343054 MS.gene057881:CDS
CGAGTCCTGGATCCATTGCA+AGG 0.622023 5.3:+69338769 None:intergenic
TAATAGCCATGAGAAGGCAA+AGG 0.623516 5.3:-69342885 MS.gene057881:intron
TCAATTACTGTGTATAATCG+AGG 0.623863 5.3:-69338612 MS.gene057881:CDS
AACTCAAGATCATCAAGGGA+GGG 0.624343 5.3:+69343024 None:intergenic
AGTGCAACCATTAATACTCA+AGG 0.632720 5.3:-69339792 MS.gene057881:intron
AGGATGTCGATGACCGTGAG+TGG 0.633757 5.3:-69340130 MS.gene057881:CDS
GAAACAACGTCTATTGCTCA+AGG 0.634413 5.3:-69340275 MS.gene057881:CDS
GTACTGACGAAAACATTACC+AGG 0.637775 5.3:-69340094 MS.gene057881:intron
ACATATATTGTATACTTGGG+AGG 0.638598 5.3:-69343066 MS.gene057881:CDS
TATGGATGCTAATGAGGACG+AGG 0.645600 5.3:-69340150 MS.gene057881:CDS
GGAACACGACGTGTATCTGA+TGG 0.646210 5.3:+69339233 None:intergenic
TTAGCATCCATACTTGCACC+AGG 0.656953 5.3:+69340161 None:intergenic
CGTGAGTGGTTTGGAAAAGG+TGG 0.657149 5.3:-69340116 MS.gene057881:CDS
GATGTAACAATATTCGGCAA+CGG 0.657589 5.3:-69341085 MS.gene057881:CDS
TAACTCAAGATCATCAAGGG+AGG 0.663086 5.3:+69343023 None:intergenic
CAATAAAGTCACGTGCTGTG+AGG 0.667759 5.3:+69341155 None:intergenic
GTGTTACAAATGTAGCACCT+TGG 0.674203 5.3:-69340781 MS.gene057881:CDS
GGTAACGGCACAGCGAAAGG+TGG 0.679426 5.3:-69341064 MS.gene057881:CDS
AATACTGGAAAACCATGAGG+AGG 0.686042 5.3:+69338414 None:intergenic
CCAGCAATGCCAGCAACATG+AGG 0.694690 5.3:+69339176 None:intergenic
CTATAGGACTAGTTACTCTG+TGG 0.701819 5.3:+69338364 None:intergenic
CCAAATACTGGAAAACCATG+AGG 0.707398 5.3:+69338411 None:intergenic
GTTCCTTACAATCTACAACA+AGG 0.708445 5.3:-69339215 MS.gene057881:CDS
GCTGCAACAGTGAAAGACCA+AGG 0.714415 5.3:+69340764 None:intergenic
TGGTCAAAGACAGATGCAGG+TGG 0.723373 5.3:-69341004 MS.gene057881:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATATTTAAAAGCAAAATT+TGG + chr5.3:69338502-69338521 None:intergenic 10.0%
!!! ATTAATTATCTTTGATATTT+TGG - chr5.3:69342154-69342173 MS.gene057881:intron 10.0%
!!! TATACGTTTATAATTAATTT+TGG + chr5.3:69339277-69339296 None:intergenic 10.0%
!! ACAAATTATAGAAAACTAAT+TGG - chr5.3:69340388-69340407 MS.gene057881:intron 15.0%
!! TTTCATTAAATAATGAGAAA+GGG + chr5.3:69339588-69339607 None:intergenic 15.0%
!!! AAACATGTTTTAATTAGAAA+AGG + chr5.3:69339546-69339565 None:intergenic 15.0%
!!! ATTTGATATATTTTCTTTGA+TGG + chr5.3:69341064-69341083 None:intergenic 15.0%
!!! CTAGATTTTATTTTTGATTT+AGG + chr5.3:69342607-69342626 None:intergenic 15.0%
!!! GAACATAGTTTTTTTTATTA+AGG + chr5.3:69342731-69342750 None:intergenic 15.0%
!!! TATTTTTTTAAGCAAGTTTA+GGG + chr5.3:69341152-69341171 None:intergenic 15.0%
!!! TTATTTTTGATTTAGGTAAA+AGG + chr5.3:69342600-69342619 None:intergenic 15.0%
!!! TTTTCATTAAATAATGAGAA+AGG + chr5.3:69339589-69339608 None:intergenic 15.0%
!! AAGTTATTGATAAACATCTA+CGG - chr5.3:69340251-69340270 MS.gene057881:CDS 20.0%
!! ACATTATTTATCATACTCTA+TGG - chr5.3:69339242-69339261 MS.gene057881:CDS 20.0%
!! ATTTATGAAGATAAGAAGTT+GGG + chr5.3:69339512-69339531 None:intergenic 20.0%
!! TAAACAAAGACAATGAATAT+AGG - chr5.3:69340304-69340323 MS.gene057881:CDS 20.0%
!! TAAATCATAATGTGAATTTG+TGG + chr5.3:69338627-69338646 None:intergenic 20.0%
!! TAGACATATATTGTATACTT+GGG - chr5.3:69338554-69338573 MS.gene057881:CDS 20.0%
!! TATTTATGAAGATAAGAAGT+TGG + chr5.3:69339513-69339532 None:intergenic 20.0%
!! TCTTACAATAAGCATATAAA+TGG - chr5.3:69338775-69338794 MS.gene057881:CDS 20.0%
!! TGAATGTAGGAATTAAAAAT+AGG + chr5.3:69342246-69342265 None:intergenic 20.0%
!! TGGTAACAAAAATTACATAA+AGG - chr5.3:69340921-69340940 MS.gene057881:CDS 20.0%
!!! AGTTATTTTACATGTATTTC+AGG - chr5.3:69341006-69341025 MS.gene057881:CDS 20.0%
!!! ATATCTTTTTTAAGTGTGTT+TGG - chr5.3:69339876-69339895 MS.gene057881:CDS 20.0%
!!! CTATTTTTTTAAGCAAGTTT+AGG + chr5.3:69341153-69341172 None:intergenic 20.0%
!!! GAAATATAAATTGAGTATTG+AGG + chr5.3:69342046-69342065 None:intergenic 20.0%
!!! GTTATTTTACATGTATTTCA+GGG - chr5.3:69341007-69341026 MS.gene057881:CDS 20.0%
!!! TAAAGGTATGAATAGAAATA+AGG - chr5.3:69340938-69340957 MS.gene057881:CDS 20.0%
!!! TAATATCTTTCCTTTTACTT+TGG + chr5.3:69341310-69341329 None:intergenic 20.0%
!!! TATAATTTGTCACATAACAT+AGG + chr5.3:69340378-69340397 None:intergenic 20.0%
!!! TGAAATAAAGTACTGATATT+TGG + chr5.3:69339621-69339640 None:intergenic 20.0%
!!! TTTGTTAGTCATATTTCTAT+TGG - chr5.3:69340901-69340920 MS.gene057881:CDS 20.0%
! AATATAAATTGCACACTACA+AGG - chr5.3:69338971-69338990 MS.gene057881:intron 25.0%
! AATTTATTCCATGACTAAGA+AGG + chr5.3:69339651-69339670 None:intergenic 25.0%
! ACAAATGAAGTTCAAGTAAT+CGG + chr5.3:69342898-69342917 None:intergenic 25.0%
! AGATGTTAAATAGAAGAACT+TGG - chr5.3:69339155-69339174 MS.gene057881:CDS 25.0%
! ATCATTGCTAATTTAGATTC+AGG - chr5.3:69339078-69339097 MS.gene057881:intron 25.0%
! ATTTGATGTTTAAGCTGAAA+AGG - chr5.3:69340043-69340062 MS.gene057881:intron 25.0%
! GAATGATGATAGAAAAAGTT+TGG + chr5.3:69338372-69338391 None:intergenic 25.0%
! GTAGACATATATTGTATACT+TGG - chr5.3:69338553-69338572 MS.gene057881:CDS 25.0%
! TAGAGAAATCTGATTAAAGA+CGG + chr5.3:69341608-69341627 None:intergenic 25.0%
! TCAACAACTTGAAGAATTTA+AGG - chr5.3:69343103-69343122 MS.gene057881:intron 25.0%
! TGTATGAATGAGTATAAGAA+GGG + chr5.3:69338457-69338476 None:intergenic 25.0%
! TTAGAGTAAGAAATAAATGC+TGG + chr5.3:69339484-69339503 None:intergenic 25.0%
! TTGCAAAATGTTGTATTTGA+AGG + chr5.3:69339434-69339453 None:intergenic 25.0%
! TTGTATACCTTGAGTATTAA+TGG + chr5.3:69341841-69341860 None:intergenic 25.0%
! TTTATGAAGATAAGAAGTTG+GGG + chr5.3:69339511-69339530 None:intergenic 25.0%
! TTTCAGCTTAAACATCAAAT+TGG + chr5.3:69340043-69340062 None:intergenic 25.0%
! TTTGATCAAGCTATATATGA+TGG - chr5.3:69340670-69340689 MS.gene057881:intron 25.0%
! TTTGGATATTAAGACTATAG+AGG + chr5.3:69338484-69338503 None:intergenic 25.0%
!! GATAGAAAAAGTTTGGTAAT+AGG + chr5.3:69338365-69338384 None:intergenic 25.0%
!! GTTTTCAATGTTGTAAAACT+CGG + chr5.3:69342979-69342998 None:intergenic 25.0%
!! TTGAACTTCATTTGTGTTTT+TGG - chr5.3:69342903-69342922 MS.gene057881:intron 25.0%
!! TTTTCAATGTTGTAAAACTC+GGG + chr5.3:69342978-69342997 None:intergenic 25.0%
!!! AGCATTGATATTGTATAGTT+GGG + chr5.3:69339767-69339786 None:intergenic 25.0%
!!! TCATTGACTTTTAAGGAAAT+TGG - chr5.3:69343143-69343162 MS.gene057881:intron 25.0%
AAAATGACTCAACAAATCCA+TGG + chr5.3:69338867-69338886 None:intergenic 30.0%
AAGCTGAAAAGGTTTAACAA+CGG - chr5.3:69340054-69340073 MS.gene057881:intron 30.0%
ACATAACATAGGAATGTGTT+AGG + chr5.3:69340367-69340386 None:intergenic 30.0%
ACATATATTGTATACTTGGG+AGG - chr5.3:69338557-69338576 MS.gene057881:CDS 30.0%
ACTATATTCCTTCTTAGTCA+TGG - chr5.3:69339640-69339659 MS.gene057881:intron 30.0%
ATTAAAGCCATCTCCAATTA+TGG - chr5.3:69341780-69341799 MS.gene057881:intron 30.0%
ATTAACACTAAGTGCATGTT+TGG + chr5.3:69339997-69340016 None:intergenic 30.0%
CAAAACTACGAATCACAATA+CGG - chr5.3:69340427-69340446 MS.gene057881:intron 30.0%
CAACAATTACTTCTTTACCA+TGG - chr5.3:69338847-69338866 MS.gene057881:CDS 30.0%
CAGTAATTGAAGGATAATTG+AGG + chr5.3:69343001-69343020 None:intergenic 30.0%
CGATTATACACAGTAATTGA+AGG + chr5.3:69343011-69343030 None:intergenic 30.0%
CTGTATGAATGAGTATAAGA+AGG + chr5.3:69338458-69338477 None:intergenic 30.0%
GAAAACCTTTCAGATAATTC+TGG - chr5.3:69343172-69343191 MS.gene057881:intron 30.0%
GATGTGATTTCAACTTCTTT+GGG - chr5.3:69340697-69340716 MS.gene057881:intron 30.0%
GATTTACTTGCTTCAATCTT+AGG - chr5.3:69338641-69338660 MS.gene057881:CDS 30.0%
GTGAACAAAGCTTCAATATA+TGG + chr5.3:69340733-69340752 None:intergenic 30.0%
GTGTTAATTAAGACTCACAT+TGG - chr5.3:69340009-69340028 MS.gene057881:intron 30.0%
GTTGCCACAATAAAAGTTTA+GGG + chr5.3:69342134-69342153 None:intergenic 30.0%
TCAATTACTGTGTATAATCG+AGG - chr5.3:69343011-69343030 MS.gene057881:CDS 30.0%
TCACCTGATGTAACAATATT+CGG - chr5.3:69340532-69340551 MS.gene057881:CDS 30.0%
TCACTGATGGAATTTCAATT+GGG - chr5.3:69340749-69340768 MS.gene057881:CDS 30.0%
TCCTTAAAAGTCAATGAACT+TGG + chr5.3:69343140-69343159 None:intergenic 30.0%
TGATGTGATTTCAACTTCTT+TGG - chr5.3:69340696-69340715 MS.gene057881:intron 30.0%
TGATTCTCATACTTCAACTT+GGG - chr5.3:69339733-69339752 MS.gene057881:intron 30.0%
TGCATTCACAAAATGAATGA+AGG + chr5.3:69342280-69342299 None:intergenic 30.0%
TGTGCAACATATCTTTGAAT+TGG + chr5.3:69339207-69339226 None:intergenic 30.0%
TGTTGCCACAATAAAAGTTT+AGG + chr5.3:69342135-69342154 None:intergenic 30.0%
TTATCAAATGCGTCTCTAAT+TGG + chr5.3:69342789-69342808 None:intergenic 30.0%
TTCACTGATGGAATTTCAAT+TGG - chr5.3:69340748-69340767 MS.gene057881:CDS 30.0%
TTGATTCTCATACTTCAACT+TGG - chr5.3:69339732-69339751 MS.gene057881:intron 30.0%
! ATCTTTCCTTTTACTTTGGT+AGG + chr5.3:69341306-69341325 None:intergenic 30.0%
! CAAATACAACATTTTGCAAC+AGG - chr5.3:69339435-69339454 MS.gene057881:intron 30.0%
! TTTTTGTAATAGCCATGAGA+AGG - chr5.3:69338732-69338751 MS.gene057881:CDS 30.0%
!! AGACTCATCTCTTGTTATTT+CGG + chr5.3:69339819-69339838 None:intergenic 30.0%
!! ATATCGACTCCATTTGAATA+TGG - chr5.3:69342810-69342829 MS.gene057881:CDS 30.0%
!! GAGCATTGATATTGTATAGT+TGG + chr5.3:69339768-69339787 None:intergenic 30.0%
!! GTATTGATTTGCTAACATAC+CGG + chr5.3:69342535-69342554 None:intergenic 30.0%
!!! ACCAAGTTCATTGACTTTTA+AGG - chr5.3:69343136-69343155 MS.gene057881:intron 30.0%
!!! TTCACGGAAAATGTTGTTTT+AGG - chr5.3:69342690-69342709 MS.gene057881:CDS 30.0%
AAATCTGCTATCATGACTAC+CGG - chr5.3:69342513-69342532 MS.gene057881:intron 35.0%
AAATGATTGCTGCAGGAAAA+TGG - chr5.3:69341723-69341742 MS.gene057881:intron 35.0%
AACCTTTCAGATAATTCTGG+AGG - chr5.3:69343175-69343194 MS.gene057881:intron 35.0%
AACTAAGGTCCTTGTGTATT+TGG + chr5.3:69339793-69339812 None:intergenic 35.0%
AATGCTCTACCAAATACACA+AGG - chr5.3:69339781-69339800 MS.gene057881:intron 35.0%
AATTGAGACAATGTCCCAAT+CGG - chr5.3:69341979-69341998 MS.gene057881:intron 35.0%
ACGGAGAGACATAAAATGTA+AGG - chr5.3:69340073-69340092 MS.gene057881:intron 35.0%
ACTCCATTTGAATATGGTTC+TGG - chr5.3:69342816-69342835 MS.gene057881:CDS 35.0%
AGAAACAAAATGATTGCTGC+AGG - chr5.3:69341716-69341735 MS.gene057881:intron 35.0%
AGTCATGATAGCAGATTTGA+TGG + chr5.3:69342511-69342530 None:intergenic 35.0%
AGTGCAACCATTAATACTCA+AGG - chr5.3:69341831-69341850 MS.gene057881:intron 35.0%
ATTAAAAATAGGCGACCACT+AGG + chr5.3:69342235-69342254 None:intergenic 35.0%
ATTTCCACAACATATGTGCT+AGG + chr5.3:69343083-69343102 None:intergenic 35.0%
CAAGTCAATTTCCCAAATAC+TGG + chr5.3:69343227-69343246 None:intergenic 35.0%
CAGTATTTGGGAAATTGACT+TGG - chr5.3:69343225-69343244 MS.gene057881:CDS 35.0%
CTTATATCATAAACGAGTCC+TGG + chr5.3:69342870-69342889 None:intergenic 35.0%
CTTGATCCTACCAAAGTAAA+AGG - chr5.3:69341297-69341316 MS.gene057881:intron 35.0%
CTTTGACCAACATACTTTGT+AGG + chr5.3:69340608-69340627 None:intergenic 35.0%
GAATTTCTCTTGATTCTGCT+TGG - chr5.3:69339028-69339047 MS.gene057881:intron 35.0%
GATGTAACAATATTCGGCAA+CGG - chr5.3:69340538-69340557 MS.gene057881:CDS 35.0%
GATTCTCATACTTCAACTTG+GGG - chr5.3:69339734-69339753 MS.gene057881:intron 35.0%
GTGATCAATGATGAGAAAAG+TGG - chr5.3:69341408-69341427 MS.gene057881:intron 35.0%
GTTCCTTACAATCTACAACA+AGG - chr5.3:69342408-69342427 MS.gene057881:intron 35.0%
TAAACTCGTATGAGTTTACC+TGG + chr5.3:69341550-69341569 None:intergenic 35.0%
TACTTACGCATCTTGAATTG+TGG + chr5.3:69341119-69341138 None:intergenic 35.0%
TACTTGCTTCAATCTTAGGA+AGG - chr5.3:69338645-69338664 MS.gene057881:CDS 35.0%
TAGCATCCTACAAAGTATGT+TGG - chr5.3:69340599-69340618 MS.gene057881:intron 35.0%
TCAAAGATTGCTCACTTTCA+CGG - chr5.3:69342674-69342693 MS.gene057881:CDS 35.0%
TCCTGTATATGTTCTTGCTT+CGG + chr5.3:69341761-69341780 None:intergenic 35.0%
TGCAGCTAGTACAATTGATA+GGG - chr5.3:69340876-69340895 MS.gene057881:CDS 35.0%
TGTCCAGAACCATATTCAAA+TGG + chr5.3:69342822-69342841 None:intergenic 35.0%
TTAAAAATAGGCGACCACTA+GGG + chr5.3:69342234-69342253 None:intergenic 35.0%
TTGCAGCTAGTACAATTGAT+AGG - chr5.3:69340875-69340894 MS.gene057881:CDS 35.0%
TTGCCGAATATTGTTACATC+AGG + chr5.3:69340538-69340557 None:intergenic 35.0%
TTGTAGTTGTTTGTTCTGCT+GGG - chr5.3:69340797-69340816 MS.gene057881:CDS 35.0%
! AGGACCCTAAACTTTTATTG+TGG - chr5.3:69342127-69342146 MS.gene057881:intron 35.0%
! CGTATTGTGATTCGTAGTTT+TGG + chr5.3:69340429-69340448 None:intergenic 35.0%
! CTCATGGTTTTCCAGTATTT+GGG - chr5.3:69343213-69343232 MS.gene057881:CDS 35.0%
! GTTCCTTGTTGTAGATTGTA+AGG + chr5.3:69342414-69342433 None:intergenic 35.0%
! TTTCTTGGACTGGAAAAAGA+TGG - chr5.3:69339003-69339022 MS.gene057881:intron 35.0%
!! AGTCCTATAGTAGTCTTGTA+AGG - chr5.3:69343272-69343291 MS.gene057881:CDS 35.0%
!! ATTGAAGCTTTGTTCACTGA+TGG - chr5.3:69340736-69340755 MS.gene057881:CDS 35.0%
!! ATTTTCTTTGATGGTCCTGA+TGG + chr5.3:69341055-69341074 None:intergenic 35.0%
!! GACATGTTTGTTGTTGAAAC+AGG - chr5.3:69339308-69339327 MS.gene057881:intron 35.0%
!! GACTCATCTCTTGTTATTTC+GGG + chr5.3:69339818-69339837 None:intergenic 35.0%
!! TTGATTGGTGTTATCTAGTG+TGG + chr5.3:69342766-69342785 None:intergenic 35.0%
!! TTGTTATTTCGGGACAACTA+AGG + chr5.3:69339808-69339827 None:intergenic 35.0%
!!! TTATTCCAGTCGTTTTTGCA+AGG - chr5.3:69341266-69341285 MS.gene057881:intron 35.0%
AACTCAAGATCATCAAGGGA+GGG + chr5.3:69338602-69338621 None:intergenic 40.0%
AATACTGGAAAACCATGAGG+AGG + chr5.3:69343212-69343231 None:intergenic 40.0%
AATTGCACACTACAAGGTCA+TGG - chr5.3:69338977-69338996 MS.gene057881:intron 40.0%
ACAATATTCGGCAACGGTAA+CGG - chr5.3:69340544-69340563 MS.gene057881:CDS 40.0%
ACTCGTACAGTCACAAATGT+CGG - chr5.3:69343053-69343072 MS.gene057881:CDS 40.0%
AGCACATGCTTACCTTTCTA+AGG + chr5.3:69338430-69338449 None:intergenic 40.0%
ATGGTCAAGTGCCATCAAAA+TGG - chr5.3:69339369-69339388 MS.gene057881:intron 40.0%
ATTAATGGTTGCACTGCACT+AGG + chr5.3:69341826-69341845 None:intergenic 40.0%
ATTGCACACTACAAGGTCAT+GGG - chr5.3:69338978-69338997 MS.gene057881:intron 40.0%
CATGAAAGTTTCAGTGGCAT+TGG - chr5.3:69339344-69339363 MS.gene057881:intron 40.0%
CCAAATACTGGAAAACCATG+AGG + chr5.3:69343215-69343234 None:intergenic 40.0%
CCACTGAAACTTTCATGTTC+CGG + chr5.3:69339341-69339360 None:intergenic 40.0%
CGAGTAGCGTTTATAAGGTT+TGG + chr5.3:69343038-69343057 None:intergenic 40.0%
CTGTACGAGTAGCGTTTATA+AGG + chr5.3:69343043-69343062 None:intergenic 40.0%
CTTAGTAAAGGCTTACCATC+AGG - chr5.3:69341037-69341056 MS.gene057881:CDS 40.0%
GAAACAACGTCTATTGCTCA+AGG - chr5.3:69341348-69341367 MS.gene057881:intron 40.0%
GATGAAAACCCAGCCATAAT+TGG + chr5.3:69341796-69341815 None:intergenic 40.0%
GCACATGCTTACCTTTCTAA+GGG + chr5.3:69338429-69338448 None:intergenic 40.0%
GCTACATTTGTAACACTCCT+AGG + chr5.3:69340838-69340857 None:intergenic 40.0%
GGAGAGTAGACATTGAATGT+AGG + chr5.3:69342259-69342278 None:intergenic 40.0%
GGCTAACTCAAGATCATCAA+GGG + chr5.3:69338606-69338625 None:intergenic 40.0%
GTATCTGATGGTAGATTCGA+TGG + chr5.3:69342381-69342400 None:intergenic 40.0%
GTGATTTCAACTTCTTTGGG+TGG - chr5.3:69340700-69340719 MS.gene057881:intron 40.0%
GTGTTACAAATGTAGCACCT+TGG - chr5.3:69340842-69340861 MS.gene057881:CDS 40.0%
GTTGTAGTTGTTTGTTCTGC+TGG - chr5.3:69340796-69340815 MS.gene057881:CDS 40.0%
TAACTCAAGATCATCAAGGG+AGG + chr5.3:69338603-69338622 None:intergenic 40.0%
TAATAGCCATGAGAAGGCAA+AGG - chr5.3:69338738-69338757 MS.gene057881:CDS 40.0%
TATTCAGCCTAACCTTGCAA+TGG - chr5.3:69342842-69342861 MS.gene057881:CDS 40.0%
TCAAGACACTTCATCCTAGT+TGG - chr5.3:69342475-69342494 MS.gene057881:intron 40.0%
TCCGAAGCAAGAACATATAC+AGG - chr5.3:69341757-69341776 MS.gene057881:intron 40.0%
TGCAAGTATGGATGCTAATG+AGG - chr5.3:69341467-69341486 MS.gene057881:intron 40.0%
TGCCTCCAGAATTATCTGAA+AGG + chr5.3:69343180-69343199 None:intergenic 40.0%
TGCGTCTCTAATTGGTTGAT+TGG + chr5.3:69342781-69342800 None:intergenic 40.0%
TGGCTAACTCAAGATCATCA+AGG + chr5.3:69338607-69338626 None:intergenic 40.0%
TTTATCGAACTGATGCCGAT+TGG + chr5.3:69341997-69342016 None:intergenic 40.0%
TTTCTCTTGATTCTGCTTGG+TGG - chr5.3:69339031-69339050 MS.gene057881:intron 40.0%
! AGTTTCAGTGGCATTGGATA+TGG - chr5.3:69339350-69339369 MS.gene057881:intron 40.0%
! CAGATAATTCTGGAGGCAAT+AGG - chr5.3:69343182-69343201 MS.gene057881:intron 40.0%
! CCTCATGGTTTTCCAGTATT+TGG - chr5.3:69343212-69343231 MS.gene057881:CDS 40.0%
! GTACTGACGAAAACATTACC+AGG - chr5.3:69341529-69341548 MS.gene057881:intron 40.0%
! TATGGCTGGGTTTTCATCTA+GGG - chr5.3:69341798-69341817 MS.gene057881:intron 40.0%
! TTATCGAACTGATGCCGATT+GGG + chr5.3:69341996-69342015 None:intergenic 40.0%
! TTATGGCTGGGTTTTCATCT+AGG - chr5.3:69341797-69341816 MS.gene057881:intron 40.0%
! TTGTTGTTGAAACAGGCGTT+TGG - chr5.3:69339315-69339334 MS.gene057881:intron 40.0%
!! AACATCTACGGTGTTGTGTA+TGG - chr5.3:69340263-69340282 MS.gene057881:CDS 40.0%
!! CTATAGGACTAGTTACTCTG+TGG + chr5.3:69343262-69343281 None:intergenic 40.0%
!! GGGAAATTGACTTGGACAAA+TGG - chr5.3:69343233-69343252 MS.gene057881:CDS 40.0%
!! TTGATAATGTGTGTGTGCCA+TGG + chr5.3:69340495-69340514 None:intergenic 40.0%
!! TTTAGCCTTGCAAAAACGAC+TGG + chr5.3:69341274-69341293 None:intergenic 40.0%
AACCCAGCCATAATTGGAGA+TGG + chr5.3:69341790-69341809 None:intergenic 45.0%
AAGCCATCTCCAATTATGGC+TGG - chr5.3:69341784-69341803 MS.gene057881:intron 45.0%
AAGTGCCATCAAAATGGCGT+GGG - chr5.3:69339375-69339394 MS.gene057881:intron 45.0%
ACAAGGTCATGGGACTTTCT+TGG - chr5.3:69338988-69339007 MS.gene057881:intron 45.0%
ACACACTGATGCCCTTAGAA+AGG - chr5.3:69338415-69338434 MS.gene057881:CDS 45.0%
ACTTCGATTCTTCACCCTAG+TGG - chr5.3:69342217-69342236 MS.gene057881:CDS 45.0%
AGATCATCAAGGGAGGGATT+TGG + chr5.3:69338596-69338615 None:intergenic 45.0%
AGCCATCTCCAATTATGGCT+GGG - chr5.3:69341785-69341804 MS.gene057881:intron 45.0%
ATCAAAATGGCGTGGGAATG+GGG - chr5.3:69339382-69339401 MS.gene057881:intron 45.0%
ATGTCTTGTCCTCATGTTGC+TGG - chr5.3:69342438-69342457 MS.gene057881:intron 45.0%
CAATAAAGTCACGTGCTGTG+AGG + chr5.3:69340471-69340490 None:intergenic 45.0%
CACACATTATCAACAGCAGC+AGG - chr5.3:69340502-69340521 MS.gene057881:intron 45.0%
CATCAAAATGGCGTGGGAAT+GGG - chr5.3:69339381-69339400 MS.gene057881:intron 45.0%
CCGGAACATGAAAGTTTCAG+TGG - chr5.3:69339338-69339357 MS.gene057881:intron 45.0%
CTCACAGCACGTGACTTTAT+TGG - chr5.3:69340469-69340488 MS.gene057881:intron 45.0%
CTCGTACAGTCACAAATGTC+GGG - chr5.3:69343054-69343073 MS.gene057881:CDS 45.0%
CTGTTTCCTTTGCCTTCTCA+TGG + chr5.3:69338747-69338766 None:intergenic 45.0%
GTCTCCTAGCACATATGTTG+TGG - chr5.3:69343076-69343095 MS.gene057881:intron 45.0%
GTTTGTTCTGCTGGGAATGA+TGG - chr5.3:69340805-69340824 MS.gene057881:CDS 45.0%
TACTTGGGAGGACATTCTCA+TGG - chr5.3:69338569-69338588 MS.gene057881:CDS 45.0%
TATGGATGCTAATGAGGACG+AGG - chr5.3:69341473-69341492 MS.gene057881:intron 45.0%
TCCATACTTGCACCAGGTAA+AGG + chr5.3:69341459-69341478 None:intergenic 45.0%
TCCTTTACCTGGTGCAAGTA+TGG - chr5.3:69341455-69341474 MS.gene057881:intron 45.0%
TGATGGTAGATTCGATGGAC+TGG + chr5.3:69342376-69342395 None:intergenic 45.0%
TGCACTGCTTGAAGATGAAG+AGG - chr5.3:69338804-69338823 MS.gene057881:CDS 45.0%
TGTTGGTCAAAGACAGATGC+AGG - chr5.3:69340616-69340635 MS.gene057881:intron 45.0%
TTAGCATCCATACTTGCACC+AGG + chr5.3:69341465-69341484 None:intergenic 45.0%
TTTGTAACACTCCTAGGAGC+AGG + chr5.3:69340832-69340851 None:intergenic 45.0%
! ATAGCAGATTTGATGGCAGC+TGG + chr5.3:69342504-69342523 None:intergenic 45.0%
! ATGGCTGGGTTTTCATCTAG+GGG - chr5.3:69341799-69341818 MS.gene057881:intron 45.0%
! CACCTTTTCCAAACCACTCA+CGG + chr5.3:69341509-69341528 None:intergenic 45.0%
! CTTGGACTGGAAAAAGATGG+TGG - chr5.3:69339006-69339025 MS.gene057881:intron 45.0%
! TCTTGATTCTGCTTGGTGGA+AGG - chr5.3:69339035-69339054 MS.gene057881:intron 45.0%
! TTCTAGTTGCGTCTACAGTG+AGG - chr5.3:69341891-69341910 MS.gene057881:intron 45.0%
!! CAGGGTGCTAGTCTTAGTAA+AGG - chr5.3:69341025-69341044 MS.gene057881:CDS 45.0%
ACTCCAGGAGCAGTTATGTC+AGG + chr5.3:69342324-69342343 None:intergenic 50.0%
AGATCACTGTCTCAGCCCTA+AGG - chr5.3:69342098-69342117 MS.gene057881:intron 50.0%
CAAGTGCCATCAAAATGGCG+TGG - chr5.3:69339374-69339393 MS.gene057881:intron 50.0%
CCATCAAAATGGCGTGGGAA+TGG - chr5.3:69339380-69339399 MS.gene057881:intron 50.0%
CCTAACCTTGCAATGGATCC+AGG - chr5.3:69342849-69342868 MS.gene057881:CDS 50.0%
CCTGGATCCATTGCAAGGTT+AGG + chr5.3:69342852-69342871 None:intergenic 50.0%
CTTGCACCAGGTAAAGGATG+AGG + chr5.3:69341453-69341472 None:intergenic 50.0%
GCAATAGGTATGCCTCCTCA+TGG - chr5.3:69343197-69343216 MS.gene057881:intron 50.0%
GCACGTGACTTTATTGGCCA+TGG - chr5.3:69340475-69340494 MS.gene057881:intron 50.0%
GCTGCAACAGTGAAAGACCA+AGG + chr5.3:69340862-69340881 None:intergenic 50.0%
GGAACACGACGTGTATCTGA+TGG + chr5.3:69342393-69342412 None:intergenic 50.0%
GTCATGGGACTTTCTTGGAC+TGG - chr5.3:69338993-69339012 MS.gene057881:intron 50.0%
TAGGATGCTACACGTGCTCT+AGG + chr5.3:69340589-69340608 None:intergenic 50.0%
TCACGTGCTGTGAGGTTTGA+GGG + chr5.3:69340463-69340482 None:intergenic 50.0%
TGGTCAAAGACAGATGCAGG+TGG - chr5.3:69340619-69340638 MS.gene057881:intron 50.0%
TGTTGAAACAGGCGTTTGGC+CGG - chr5.3:69339319-69339338 MS.gene057881:intron 50.0%
! CGTGAGTGGTTTGGAAAAGG+TGG - chr5.3:69341507-69341526 MS.gene057881:intron 50.0%
! GACCGTGAGTGGTTTGGAAA+AGG - chr5.3:69341504-69341523 MS.gene057881:intron 50.0%
! GCTTGGTGGAAGGCAAGATT+TGG - chr5.3:69339045-69339064 MS.gene057881:intron 50.0%
!! CCATTCCCACGCCATTTTGA+TGG + chr5.3:69339383-69339402 None:intergenic 50.0%
!! TGGTAGATTCGATGGACTGG+TGG + chr5.3:69342373-69342392 None:intergenic 50.0%
AGGATGTCGATGACCGTGAG+TGG - chr5.3:69341493-69341512 MS.gene057881:intron 55.0%
ATGGCAGCTGGACTCCAACT+AGG + chr5.3:69342492-69342511 None:intergenic 55.0%
CAGCCTGACATAACTGCTCC+TGG - chr5.3:69342318-69342337 MS.gene057881:intron 55.0%
CCAGCAATGCCAGCAACATG+AGG + chr5.3:69342450-69342469 None:intergenic 55.0%
CCTCATGTTGCTGGCATTGC+TGG - chr5.3:69342447-69342466 MS.gene057881:intron 55.0%
CGAGTCCTGGATCCATTGCA+AGG + chr5.3:69342857-69342876 None:intergenic 55.0%
CTGCTCTTGCAGGAGCTGTA+GGG - chr5.3:69341379-69341398 MS.gene057881:intron 55.0%
GCTGAGCCTCATCCTTTACC+TGG - chr5.3:69341444-69341463 MS.gene057881:intron 55.0%
GTCACGTGCTGTGAGGTTTG+AGG + chr5.3:69340464-69340483 None:intergenic 55.0%
GTCGATGACCGTGAGTGGTT+TGG - chr5.3:69341498-69341517 MS.gene057881:intron 55.0%
TAGGGTCCTCCACGTCCTTA+GGG + chr5.3:69342116-69342135 None:intergenic 55.0%
TTAGGGTCCTCCACGTCCTT+AGG + chr5.3:69342117-69342136 None:intergenic 55.0%
! AACGGTAACGGCACAGCGAA+AGG - chr5.3:69340556-69340575 MS.gene057881:CDS 55.0%
!! GGAATGATGGACCTGCTCCT+AGG - chr5.3:69340818-69340837 MS.gene057881:CDS 55.0%
!! GGCTTTGAAGCTGCTCTTGC+AGG - chr5.3:69341369-69341388 MS.gene057881:intron 55.0%
CTGTCTCAGCCCTAAGGACG+TGG - chr5.3:69342104-69342123 MS.gene057881:intron 60.0%
GCTGCTCTTGCAGGAGCTGT+AGG - chr5.3:69341378-69341397 MS.gene057881:intron 60.0%
TCTCAGCCCTAAGGACGTGG+AGG - chr5.3:69342107-69342126 MS.gene057881:intron 60.0%
! GGTAACGGCACAGCGAAAGG+TGG - chr5.3:69340559-69340578 MS.gene057881:CDS 60.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 69338353 69343292 69338353 ID=MS.gene057881
chr5.3 mRNA 69338353 69343292 69338353 ID=MS.gene057881.t1;Parent=MS.gene057881
chr5.3 exon 69343209 69343292 69343209 ID=MS.gene057881.t1.exon1;Parent=MS.gene057881.t1
chr5.3 CDS 69343209 69343292 69343209 ID=cds.MS.gene057881.t1;Parent=MS.gene057881.t1
chr5.3 exon 69342979 69343088 69342979 ID=MS.gene057881.t1.exon2;Parent=MS.gene057881.t1
chr5.3 CDS 69342979 69343088 69342979 ID=cds.MS.gene057881.t1;Parent=MS.gene057881.t1
chr5.3 exon 69342804 69342901 69342804 ID=MS.gene057881.t1.exon3;Parent=MS.gene057881.t1
chr5.3 CDS 69342804 69342901 69342804 ID=cds.MS.gene057881.t1;Parent=MS.gene057881.t1
chr5.3 exon 69342546 69342710 69342546 ID=MS.gene057881.t1.exon4;Parent=MS.gene057881.t1
chr5.3 CDS 69342546 69342710 69342546 ID=cds.MS.gene057881.t1;Parent=MS.gene057881.t1
chr5.3 exon 69342189 69342315 69342189 ID=MS.gene057881.t1.exon5;Parent=MS.gene057881.t1
chr5.3 CDS 69342189 69342315 69342189 ID=cds.MS.gene057881.t1;Parent=MS.gene057881.t1
chr5.3 exon 69340703 69341246 69340703 ID=MS.gene057881.t1.exon6;Parent=MS.gene057881.t1
chr5.3 CDS 69340703 69341246 69340703 ID=cds.MS.gene057881.t1;Parent=MS.gene057881.t1
chr5.3 exon 69340514 69340617 69340514 ID=MS.gene057881.t1.exon7;Parent=MS.gene057881.t1
chr5.3 CDS 69340514 69340617 69340514 ID=cds.MS.gene057881.t1;Parent=MS.gene057881.t1
chr5.3 exon 69340095 69340370 69340095 ID=MS.gene057881.t1.exon8;Parent=MS.gene057881.t1
chr5.3 CDS 69340095 69340370 69340095 ID=cds.MS.gene057881.t1;Parent=MS.gene057881.t1
chr5.3 exon 69339793 69339907 69339793 ID=MS.gene057881.t1.exon9;Parent=MS.gene057881.t1
chr5.3 CDS 69339793 69339907 69339793 ID=cds.MS.gene057881.t1;Parent=MS.gene057881.t1
chr5.3 exon 69339111 69339324 69339111 ID=MS.gene057881.t1.exon10;Parent=MS.gene057881.t1
chr5.3 CDS 69339111 69339324 69339111 ID=cds.MS.gene057881.t1;Parent=MS.gene057881.t1
chr5.3 exon 69338353 69338885 69338353 ID=MS.gene057881.t1.exon11;Parent=MS.gene057881.t1
chr5.3 CDS 69338353 69338885 69338353 ID=cds.MS.gene057881.t1;Parent=MS.gene057881.t1
Gene Sequence

>MS.gene057881

ATGTCATATCCTATTACCAAACTTTTTCTATCATCATTCATTCTTTGCAGTTTCTTGCTAGAACACACTGATGCCCTTAGAAAGGTAAGCATGTGCTCAATCCCTTCTTATACTCATTCATACAGTTACCTCTATAGTCTTAATATCCAAATTTTGCTTTTAAATATAACAATATATATTTCATAATTGTTTTCTCTTTTGTAGACATATATTGTATACTTGGGAGGACATTCTCATGGTCCAAATCCCTCCCTTGATGATCTTGAGTTAGCCACAAATTCACATTATGATTTACTTGCTTCAATCTTAGGAAGGTACATAGTTTATTAATTTTATTTTACATATTCTAAGACACTAGAGAAATTCTAAAATAGTTGAGTTTTTGTAATAGCCATGAGAAGGCAAAGGAAACAGTGATGTACTCTTACAATAAGCATATAAATGGATTTGCTGCACTGCTTGAAGATGAAGAGGCATCAAAGATTGCAAGTGAGCAACAATTACTTCTTTACCATGGATTTGTTGAGTCATTTTTTAAGACACAAATTGACACTATTTATATTTGTTTCTATGTTCGTGCAGATAACTCAAATGTAGTTTCTGTTTTCTTGAGCAAAGAATATAAATTGCACACTACAAGGTCATGGGACTTTCTTGGACTGGAAAAAGATGGTGGAATTTCTCTTGATTCTGCTTGGTGGAAGGCAAGATTTGGTGAAGATTCAATCATTGCTAATTTAGATTCAGGTTAGTTTTTATTGATGAAAAAAATAATTAAGTAAATATTTCATATTTCATATCTAGATGTTAAATAGAAGAACTTGGTGAGTAAAATAATTTCACGTGTGCATCCAATTCAAAGATATGTTGCACATCATGAGTTAAAAACACATTATTTATCATACTCTATGGTTTCACATTCCAAAATTAATTATAAACGTATAAAATTGATTTTGACATGTTTGTTGTTGAAACAGGCGTTTGGCCGGAACATGAAAGTTTCAGTGGCATTGGATATGGTCAAGTGCCATCAAAATGGCGTGGGAATGGGGTCTGTGAGATTGATCATTTTATTACACCTTCAAATACAACATTTTGCAACAGGTCATTTTCTTGAGTTATTTCATTCCAGCATTTATTTCTTACTCTAAAGTACCCCAACTTCTTATCTTCATAAATAAAACTGTTGTCCTTTTCTAATTAAAACATGTTTTGTAATTTTAGTGTAATGTCCCTTTCTCATTATTTAATGAAAATCATGTGTGCCAAATATCAGTACTTTATTTCACTATATTCCTTCTTAGTCATGGAATAAATTTCATTTTTAAAAAGAAAACTTAATTTCACTTTTGATTATAAGATATCACTCTTGTGAAATATTGATTCTCATACTTCAACTTGGGGAATAGATCCCAACTATACAATATCAATGCTCTACCAAATACACAAGGACCTTAGTTGTCCCGAAATAACAAGAGATGAGTCTTCACGTGCAACATGTTTCTGATAACTATATGTGTTTGATATCTTTTTTAAGTGTGTTTGGTTTCGCTTTTGCAACACATTAAAGCATGTTTGCACGCTTCTCAGTGCATTTTTGCTGTGATTTTCAGAAGTTCTAAATACTAGCTTTTATGCTAACCAAACATGCACTTAGTGTTAATTAAGACTCACATTGGACACGTAGCCAATTTGATGTTTAAGCTGAAAAGGTTTAACAACGGAGAGACATAAAATGTAAGGATCTAGATATAATATACTTTAGAAACTCGATTCACACAATAAATAAAGAAAGAGAAGATGTTTTGACATCAAAATTTTGACGTCAAATAATGTGTTCTTTCGTTTTGATGTGTATTTTTAAAACGTGTGTATATTGCAGAAGATAAAAAGTAAGAAAGTTATTGATAAACATCTACGGTGTTGTGTATGGATCGAAATAACATAAATGTAAACAAAGACAATGAATATAGGTGAAAAGAATGCTTCAACTTTGTATATACAAACAGTACCTAACACATTCCTATGTTATGTGACAAATTATAGAAAACTAATTGGAGCAAGAATATTCAGCCAAAACTACGAATCACAATACGGAAAACTCAATCCCTCAAACCTCACAGCACGTGACTTTATTGGCCATGGCACACACACATTATCAACAGCAGCAGGTAACTTTTCACCTGATGTAACAATATTCGGCAACGGTAACGGCACAGCGAAAGGTGGTTCTCCTAGAGCACGTGTAGCATCCTACAAAGTATGTTGGTCAAAGACAGATGCAGGTGGATGTCATGAAGCTGATATTCTAGCAGCATTTGATCAAGCTATATATGATGGTGTTGATGTGATTTCAACTTCTTTGGGTGGCTCTAGTCCATATATTGAAGCTTTGTTCACTGATGGAATTTCAATTGGGTCATTTCATGCTTTTGCTAAGAATGTTGTAGTTGTTTGTTCTGCTGGGAATGATGGACCTGCTCCTAGGAGTGTTACAAATGTAGCACCTTGGTCTTTCACTGTTGCAGCTAGTACAATTGATAGGGAATTTGTTAGTCATATTTCTATTGGTAACAAAAATTACATAAAGGTATGAATAGAAATAAGGAGAGTATAAGAAGCATTTATGCACACTCTTAACATTAAATTTTACAGTTATTTTACATGTATTTCAGGGTGCTAGTCTTAGTAAAGGCTTACCATCAGGACCATCAAAGAAAATATATCAAATGATTCACTCTATAGATGCTAGACTTCTTAATGCCACAATTCAAGATGCGTAAGTATTAATTAATTCCCTAAACTTGCTTAAAAAAATAGTATTTGTTATTAGATTGTAAATTATAAATTTGTATAACTTTTTTTTTTTTTACGTTATAAATTTGTATAACTTTTGTTACAAGTATGTATGTGTTATTCCAGTCGTTTTTGCAAGGCTAAAACACTTGATCCTACCAAAGTAAAAGGAAAGATATTAGTTTGTACTCGTCTTGACGAAACAACGTCTATTGCTCAAGGCTTTGAAGCTGCTCTTGCAGGAGCTGTAGGGATTTTTGTGATCAATGATGAGAAAAGTGGAAGTTTACTTCTAGCTGAGCCTCATCCTTTACCTGGTGCAAGTATGGATGCTAATGAGGACGAGGATGTCGATGACCGTGAGTGGTTTGGAAAAGGTGGTACTGACGAAAACATTACCAGGTAAACTCATACGAGTTTAAAGACTATGCACTAATGCTGTAAAACAAATTTATACCGTCTTTAATCAGATTTCTCTATGATGTCATTTGTTATATTATTTCTTAAATCATCTCAATAATTATTGTTTATTGAAATACTTTGTTTATTCATATTATATAATAGACAAGAAACAAAATGATTGCTGCAGGAAAATGGTTGCATACATGTCCGAAGCAAGAACATATACAGGATTAAAGCCATCTCCAATTATGGCTGGGTTTTCATCTAGGGGTCCTAGTGCAGTGCAACCATTAATACTCAAGGTATACAAACATTTTGTTTCATAATGTAATGAAATTTTTTCTAGTTGCGTCTACAGTGAGGATTAATATGTGAAAATCGTTTAAAACTCTTAACATTAAAAAAAAAACATTTTGTTTCATACTCGCAATTGAGACAATGTCCCAATCGGCATCAGTTCGATAAAAAAAACAAAGAAAATGAATATTAATGCCTCAATACTCAATTTATATTTCAATTTCTCTTGTTTTTTCAAATTAACACTGACAGATCACTGTCTCAGCCCTAAGGACGTGGAGGACCCTAAACTTTTATTGTGGCAACATTAATTATCTTTGATATTTTGGTTGATTTTCAAGTATCAATCTAAAGTAGACTATATGTGACACTTCGATTCTTCACCCTAGTGGTCGCCTATTTTTAATTCCTACATTCAATGTCTACTCTCCTTCATTCATTTTGTGAATGCAATGCTTTGTTTTATATTTCAGCCTGACATAACTGCTCCTGGAGTGAACATATTGGCTGCATACTCACTAGCCACCAGTCCATCGAATCTACCATCAGATACACGTCGTGTTCCTTACAATCTACAACAAGGAACTTCAATGTCTTGTCCTCATGTTGCTGGCATTGCTGGTCTTCTCAAGACACTTCATCCTAGTTGGAGTCCAGCTGCCATCAAATCTGCTATCATGACTACCGGTATGTTAGCAAATCAATACTTCGATATCGATATATGAAAATAAATTTATCATATAGATTATCCTTTTACCTAAATCAAAAATAAAATCTAGAAAATATGCATAATATAACATATGCAGTATGTGTATGTGTAGAAAAATCAAAGATTGCTCACTTTCACGGAAAATGTTGTTTTAGGTAAAATGTTCAGTTTCCTTAATAAAAAAAACTATGTTCTTGTTGCAGCTACCACACTAGATAACACCAATCAACCAATTAGAGACGCATTTGATAAGATATCGACTCCATTTGAATATGGTTCTGGACATATTCAGCCTAACCTTGCAATGGATCCAGGACTCGTTTATGATATAAGCACAACCGATTACTTGAACTTCATTTGTGTTTTTGGTCACAATCACAATTTATTGAAGTTCTTTAATTACAACTCTTACATTTGTCCCGAGTTTTACAACATTGAAAACCTCAATTATCCTTCAATTACTGTGTATAATCGAGGACCAAACCTTATAAACGCTACTCGTACAGTCACAAATGTCGGGTCTCCTAGCACATATGTTGTGGAAATTCAACAACTTGAAGAATTTAAGGTTCATGTTCAACCAAGTTCATTGACTTTTAAGGAAATTGGAGAAAAGAAAACCTTTCAGATAATTCTGGAGGCAATAGGTATGCCTCCTCATGGTTTTCCAGTATTTGGGAAATTGACTTGGACAAATGGCAACCACAGAGTAACTAGTCCTATAGTAGTCTTGTAA
Protein sequence

>MS.gene057881.t1

MSYPITKLFLSSFILCSFLLEHTDALRKTYIVYLGGHSHGPNPSLDDLELATNSHYDLLASILGSHEKAKETVMYSYNKHINGFAALLEDEEASKIANNSNVVSVFLSKEYKLHTTRSWDFLGLEKDGGISLDSAWWKARFGEDSIIANLDSGVWPEHESFSGIGYGQVPSKWRGNGVCEIDHFITPSNTTFCNRKLIGARIFSQNYESQYGKLNPSNLTARDFIGHGTHTLSTAAGNFSPDVTIFGNGNGTAKGGSPRARVASYKVCWSKTDAGGCHEADILAAFDQAIYDGVDVISTSLGGSSPYIEALFTDGISIGSFHAFAKNVVVVCSAGNDGPAPRSVTNVAPWSFTVAASTIDREFVSHISIGNKNYIKGASLSKGLPSGPSKKIYQMIHSIDARLLNATIQDARFCKAKTLDPTKVKGKILVCTRLDETTSIAQGFEAALAGAVGIFVINDEKSGSLLLAEPHPLPGASMDANEDEDVDDREWFGKGGTDENITRKMVAYMSEARTYTGLKPSPIMAGFSSRGPSAVQPLILKPDITAPGVNILAAYSLATSPSNLPSDTRRVPYNLQQGTSMSCPHVAGIAGLLKTLHPSWSPAAIKSAIMTTATTLDNTNQPIRDAFDKISTPFEYGSGHIQPNLAMDPGLVYDISTTDYLNFICVFGHNHNLLKFFNYNSYICPEFYNIENLNYPSITVYNRGPNLINATRTVTNVGSPSTYVVEIQQLEEFKVHVQPSSLTFKEIGEKKTFQIILEAIGMPPHGFPVFGKLTWTNGNHRVTSPIVVL