Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050563.t1 | XP_013450572.1 | 97.6 | 170 | 3 | 1 | 1 | 169 | 1 | 170 | 2.40E-91 | 344.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050563.t1 | Q9LW68 | 75.6 | 131 | 26 | 3 | 23 | 150 | 44 | 171 | 1.9e-52 | 206.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050563.t1 | I3T2Z0 | 97.6 | 170 | 3 | 1 | 1 | 169 | 1 | 170 | 1.7e-91 | 344.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050298 | MS.gene050563 | 0.814347 | 1.61E-51 | -1.69E-46 |
MS.gene050563 | MS.gene052142 | 0.835395 | 1.72E-56 | -1.69E-46 |
MS.gene050563 | MS.gene052698 | 0.800552 | 1.37E-48 | -1.69E-46 |
MS.gene050563 | MS.gene053383 | 0.898841 | 3.57E-77 | -1.69E-46 |
MS.gene050563 | MS.gene05456 | 0.851236 | 1.01E-60 | -1.69E-46 |
MS.gene050563 | MS.gene055359 | 0.850817 | 1.33E-60 | -1.69E-46 |
MS.gene050563 | MS.gene058918 | 0.810682 | 1.02E-50 | -1.69E-46 |
MS.gene050563 | MS.gene059006 | 0.824062 | 9.89E-54 | -1.69E-46 |
MS.gene050563 | MS.gene059768 | 0.850615 | 1.51E-60 | -1.69E-46 |
MS.gene050563 | MS.gene060691 | 0.827617 | 1.42E-54 | -1.69E-46 |
MS.gene050563 | MS.gene061336 | 0.832016 | 1.20E-55 | -1.69E-46 |
MS.gene050563 | MS.gene061337 | 0.82829 | 9.76E-55 | -1.69E-46 |
MS.gene050563 | MS.gene063207 | 0.801257 | 9.81E-49 | -1.69E-46 |
MS.gene050563 | MS.gene063566 | 0.869019 | 4.24E-66 | -1.69E-46 |
MS.gene050563 | MS.gene064719 | 0.813224 | 2.85E-51 | -1.69E-46 |
MS.gene050563 | MS.gene065358 | 0.808841 | 2.54E-50 | -1.69E-46 |
MS.gene050563 | MS.gene067305 | 0.835903 | 1.28E-56 | -1.69E-46 |
MS.gene050563 | MS.gene069330 | 0.893258 | 7.43E-75 | -1.69E-46 |
MS.gene050563 | MS.gene070489 | 0.897679 | 1.11E-76 | -1.69E-46 |
MS.gene050563 | MS.gene070499 | 0.836562 | 8.70E-57 | -1.69E-46 |
MS.gene050563 | MS.gene072320 | 0.806524 | 7.89E-50 | -1.69E-46 |
MS.gene050563 | MS.gene07948 | 0.813965 | 1.96E-51 | -1.69E-46 |
MS.gene050563 | MS.gene09437 | 0.835667 | 1.47E-56 | -1.69E-46 |
MS.gene050563 | MS.gene09868 | 0.810204 | 1.29E-50 | -1.69E-46 |
MS.gene050563 | MS.gene20964 | 0.829606 | 4.69E-55 | -1.69E-46 |
MS.gene050563 | MS.gene21082 | 0.846568 | 2.00E-59 | -1.69E-46 |
MS.gene050563 | MS.gene22109 | 0.882867 | 7.26E-71 | -1.69E-46 |
MS.gene050563 | MS.gene22410 | 0.868993 | 4.32E-66 | -1.69E-46 |
MS.gene050563 | MS.gene22855 | 0.801344 | 9.41E-49 | -1.69E-46 |
MS.gene050563 | MS.gene22900 | 0.936808 | 9.59E-98 | -1.69E-46 |
MS.gene050563 | MS.gene22934 | 0.836796 | 7.59E-57 | -1.69E-46 |
MS.gene050563 | MS.gene23012 | 0.805775 | 1.13E-49 | -1.69E-46 |
MS.gene050563 | MS.gene28281 | 0.820584 | 6.35E-53 | -1.69E-46 |
MS.gene050563 | MS.gene31254 | 0.803192 | 3.92E-49 | -1.69E-46 |
MS.gene050563 | MS.gene31359 | 0.801918 | 7.18E-49 | -1.69E-46 |
MS.gene050563 | MS.gene33324 | 0.826271 | 2.97E-54 | -1.69E-46 |
MS.gene050563 | MS.gene33515 | 0.84646 | 2.14E-59 | -1.69E-46 |
MS.gene050563 | MS.gene33516 | 0.800434 | 1.44E-48 | -1.69E-46 |
MS.gene050563 | MS.gene33517 | 0.831549 | 1.57E-55 | -1.69E-46 |
MS.gene050563 | MS.gene33518 | 0.807026 | 6.18E-50 | -1.69E-46 |
MS.gene050563 | MS.gene37909 | 0.914153 | 2.68E-84 | -1.69E-46 |
MS.gene050563 | MS.gene42294 | 0.849453 | 3.20E-60 | -1.69E-46 |
MS.gene050563 | MS.gene48835 | 0.80327 | 3.78E-49 | -1.69E-46 |
MS.gene050563 | MS.gene53275 | 0.81078 | 9.72E-51 | -1.69E-46 |
MS.gene050563 | MS.gene54133 | 0.870333 | 1.58E-66 | -1.69E-46 |
MS.gene050563 | MS.gene54531 | 0.828829 | 7.23E-55 | -1.69E-46 |
MS.gene050563 | MS.gene56128 | 0.802683 | 4.99E-49 | -1.69E-46 |
MS.gene050563 | MS.gene60080 | 0.821613 | 3.68E-53 | -1.69E-46 |
MS.gene050563 | MS.gene60245 | 0.899012 | 3.02E-77 | -1.69E-46 |
MS.gene050563 | MS.gene61665 | 0.904531 | 1.11E-79 | -1.69E-46 |
MS.gene050563 | MS.gene62049 | 0.8892 | 3.00E-73 | -1.69E-46 |
MS.gene050563 | MS.gene64052 | 0.813911 | 2.01E-51 | -1.69E-46 |
MS.gene050563 | MS.gene64101 | 0.803757 | 2.99E-49 | -1.69E-46 |
MS.gene050563 | MS.gene65481 | 0.907257 | 6.16E-81 | -1.69E-46 |
MS.gene050563 | MS.gene65661 | 0.82875 | 7.56E-55 | -1.69E-46 |
MS.gene050563 | MS.gene66966 | 0.805471 | 1.31E-49 | -1.69E-46 |
MS.gene050563 | MS.gene68922 | 0.839494 | 1.53E-57 | -1.69E-46 |
MS.gene050563 | MS.gene69441 | 0.818637 | 1.77E-52 | -1.69E-46 |
MS.gene050563 | MS.gene69587 | 0.878437 | 2.81E-69 | -1.69E-46 |
MS.gene050563 | MS.gene73229 | 0.855733 | 5.18E-62 | -1.69E-46 |
MS.gene050563 | MS.gene76613 | 0.813666 | 2.28E-51 | -1.69E-46 |
MS.gene050563 | MS.gene76705 | 0.860768 | 1.64E-63 | -1.69E-46 |
MS.gene050563 | MS.gene79672 | 0.830309 | 3.16E-55 | -1.69E-46 |
MS.gene050563 | MS.gene80842 | 0.854607 | 1.10E-61 | -1.69E-46 |
MS.gene050563 | MS.gene81601 | 0.89754 | 1.27E-76 | -1.69E-46 |
MS.gene050563 | MS.gene81612 | 0.823481 | 1.35E-53 | -1.69E-46 |
MS.gene050563 | MS.gene81695 | 0.808277 | 3.35E-50 | -1.69E-46 |
MS.gene050563 | MS.gene81958 | 0.817074 | 3.98E-52 | -1.69E-46 |
MS.gene050563 | MS.gene81959 | 0.804023 | 2.64E-49 | -1.69E-46 |
MS.gene050563 | MS.gene82214 | 0.823188 | 1.58E-53 | -1.69E-46 |
MS.gene050563 | MS.gene82571 | 0.855175 | 7.52E-62 | -1.69E-46 |
MS.gene050563 | MS.gene83221 | 0.836971 | 6.85E-57 | -1.69E-46 |
MS.gene050563 | MS.gene84726 | 0.813953 | 1.97E-51 | -1.69E-46 |
MS.gene050563 | MS.gene84833 | 0.832386 | 9.74E-56 | -1.69E-46 |
MS.gene050563 | MS.gene87985 | 0.812127 | 4.96E-51 | -1.69E-46 |
MS.gene050563 | MS.gene90152 | 0.80646 | 8.14E-50 | -1.69E-46 |
MS.gene050563 | MS.gene91805 | 0.859041 | 5.44E-63 | -1.69E-46 |
MS.gene050563 | MS.gene92495 | 0.8008 | 1.22E-48 | -1.69E-46 |
MS.gene050563 | MS.gene92551 | 0.826934 | 2.07E-54 | -1.69E-46 |
MS.gene050563 | MS.gene93760 | 0.82949 | 5.00E-55 | -1.69E-46 |
MS.gene050563 | MS.gene94555 | 0.82332 | 1.48E-53 | -1.69E-46 |
MS.gene050563 | MS.gene95739 | 0.817234 | 3.66E-52 | -1.69E-46 |
MS.gene050563 | MS.gene98787 | 0.832402 | 9.65E-56 | -1.69E-46 |
MS.gene050563 | MS.gene98837 | 0.859148 | 5.05E-63 | -1.69E-46 |
MS.gene050563 | MS.gene99922 | 0.803499 | 3.39E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050563.t1 | MTR_7g115700 | 97.647 | 170 | 3 | 1 | 1 | 169 | 1 | 170 | 3.97e-124 | 346 |
MS.gene050563.t1 | MTR_5g072510 | 72.263 | 137 | 31 | 4 | 26 | 158 | 36 | 169 | 1.07e-67 | 205 |
MS.gene050563.t1 | MTR_4g094428 | 68.571 | 140 | 37 | 4 | 25 | 160 | 44 | 180 | 2.87e-64 | 197 |
MS.gene050563.t1 | MTR_1g442860 | 73.438 | 128 | 28 | 3 | 27 | 151 | 65 | 189 | 4.07e-64 | 196 |
MS.gene050563.t1 | MTR_2g016110 | 71.318 | 129 | 31 | 3 | 25 | 150 | 33 | 158 | 9.05e-63 | 191 |
MS.gene050563.t1 | MTR_1g080210 | 73.288 | 146 | 33 | 3 | 27 | 169 | 40 | 182 | 2.10e-62 | 191 |
MS.gene050563.t1 | MTR_2g092950 | 65.306 | 147 | 45 | 3 | 16 | 159 | 12 | 155 | 4.38e-62 | 189 |
MS.gene050563.t1 | MTR_2g076400 | 68.217 | 129 | 35 | 3 | 25 | 150 | 31 | 156 | 5.15e-60 | 184 |
MS.gene050563.t1 | MTR_1g075990 | 70.213 | 141 | 36 | 3 | 19 | 156 | 45 | 182 | 9.17e-60 | 184 |
MS.gene050563.t1 | MTR_4g079930 | 66.667 | 129 | 37 | 3 | 25 | 150 | 27 | 152 | 1.79e-59 | 183 |
MS.gene050563.t1 | MTR_7g097030 | 72.263 | 137 | 32 | 3 | 23 | 156 | 60 | 193 | 4.58e-59 | 183 |
MS.gene050563.t1 | MTR_1g069825 | 73.684 | 133 | 29 | 3 | 27 | 156 | 52 | 181 | 1.49e-58 | 182 |
MS.gene050563.t1 | MTR_3g031830 | 68.276 | 145 | 39 | 4 | 27 | 167 | 42 | 183 | 1.46e-56 | 177 |
MS.gene050563.t1 | MTR_8g086350 | 64.865 | 148 | 43 | 5 | 25 | 167 | 29 | 172 | 3.45e-48 | 154 |
MS.gene050563.t1 | MTR_1g114020 | 65.385 | 52 | 17 | 1 | 20 | 71 | 64 | 114 | 6.02e-17 | 74.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050563.t1 | AT5G58500 | 70.423 | 142 | 36 | 4 | 26 | 163 | 18 | 157 | 1.64e-67 | 203 |
MS.gene050563.t1 | AT1G07090 | 65.493 | 142 | 43 | 3 | 26 | 164 | 30 | 168 | 1.49e-64 | 196 |
MS.gene050563.t1 | AT5G28490 | 76.471 | 136 | 26 | 3 | 27 | 159 | 25 | 157 | 1.61e-62 | 191 |
MS.gene050563.t1 | AT3G04510 | 70.714 | 140 | 35 | 3 | 27 | 163 | 33 | 169 | 8.56e-60 | 184 |
MS.gene050563.t1 | AT2G42610 | 67.969 | 128 | 35 | 3 | 26 | 150 | 24 | 148 | 2.55e-59 | 182 |
MS.gene050563.t1 | AT2G42610 | 67.969 | 128 | 35 | 3 | 26 | 150 | 24 | 148 | 2.55e-59 | 182 |
MS.gene050563.t1 | AT2G31160 | 75.556 | 135 | 26 | 4 | 27 | 157 | 54 | 185 | 4.54e-58 | 181 |
MS.gene050563.t1 | AT4G18610 | 65.116 | 129 | 38 | 3 | 26 | 150 | 36 | 161 | 2.18e-57 | 178 |
MS.gene050563.t1 | AT3G23290 | 75.573 | 131 | 26 | 3 | 23 | 150 | 44 | 171 | 2.69e-57 | 178 |
MS.gene050563.t1 | AT1G78815 | 63.566 | 129 | 41 | 3 | 25 | 150 | 38 | 163 | 2.96e-55 | 173 |
MS.gene050563.t1 | AT1G16910 | 58.955 | 134 | 49 | 3 | 25 | 155 | 21 | 151 | 3.23e-52 | 164 |
Find 50 sgRNAs with CRISPR-Local
Find 53 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTCACTACCTTGATCAATT+TGG | 0.137888 | 7.3:-1901821 | MS.gene050563:CDS |
TGTTCCAGTCCCTCCTCTTT+TGG | 0.212846 | 7.3:+1901924 | None:intergenic |
AATCCAACTTGTCCTTTCTT+TGG | 0.215866 | 7.3:-1901782 | MS.gene050563:CDS |
ATCCAACTTGTCCTTTCTTT+GGG | 0.324334 | 7.3:-1901781 | MS.gene050563:CDS |
TTCACTACCTTGATCAATTT+GGG | 0.326576 | 7.3:-1901820 | MS.gene050563:CDS |
TTGTCCTCTCCGTCAGGCTT+GGG | 0.343185 | 7.3:-1901732 | MS.gene050563:CDS |
CTTGTCCTCTCCGTCAGGCT+TGG | 0.356689 | 7.3:-1901733 | MS.gene050563:CDS |
CATGGTGGAAGTAACCCTTT+TGG | 0.395005 | 7.3:-1901656 | MS.gene050563:CDS |
GCACATGGAGATGGAGGGTT+TGG | 0.411549 | 7.3:+1901755 | None:intergenic |
CACTTCCATTGTAGCTGCTA+GGG | 0.441671 | 7.3:+1901984 | None:intergenic |
GTCGATGGTTTCTTAAGTAC+TGG | 0.444811 | 7.3:+1901894 | None:intergenic |
ATGTGCTTGTCCTCTCCGTC+AGG | 0.459665 | 7.3:-1901738 | MS.gene050563:CDS |
TGATCAATTTGGGAAGACTA+AGG | 0.465045 | 7.3:-1901810 | MS.gene050563:CDS |
GTGGTGGCAACAAGATCAAC+AGG | 0.470799 | 7.3:-1901955 | MS.gene050563:CDS |
CTAACAGCGCCATCACCAAA+AGG | 0.486109 | 7.3:+1901641 | None:intergenic |
GAGTTAGCTACCATAAGAAA+AGG | 0.502671 | 7.3:-1901574 | MS.gene050563:CDS |
TAGTCTTCCCAAATTGATCA+AGG | 0.503689 | 7.3:+1901813 | None:intergenic |
GTAGTTGTGATGTTGCGGTT+AGG | 0.503903 | 7.3:+1901545 | None:intergenic |
GCTTATGATCAAGAGATTCA+TGG | 0.517251 | 7.3:-1901674 | MS.gene050563:CDS |
ATTGAAGCAGAAAGTGGTAC+TGG | 0.535622 | 7.3:+1901872 | None:intergenic |
TCACTTCCATTGTAGCTGCT+AGG | 0.535763 | 7.3:+1901983 | None:intergenic |
TTATACAAGAAATATGGCAT+TGG | 0.537262 | 7.3:-1902026 | None:intergenic |
AGAGCCAAAAGAGGAGGGAC+TGG | 0.543509 | 7.3:-1901928 | MS.gene050563:CDS |
CTTTCTGCTTCAATGTGCAA+TGG | 0.545802 | 7.3:-1901863 | MS.gene050563:CDS |
TGTCCTCTCCGTCAGGCTTG+GGG | 0.552431 | 7.3:-1901731 | MS.gene050563:CDS |
GGTAGCCTTGATGCTCTCAT+CGG | 0.556787 | 7.3:-1901710 | MS.gene050563:CDS |
AGAGGACAAGCACATGGAGA+TGG | 0.557220 | 7.3:+1901746 | None:intergenic |
CAAATTGATCAAGGTAGTGA+AGG | 0.557585 | 7.3:+1901822 | None:intergenic |
GGGTTTGGCATCCCAAAGAA+AGG | 0.560750 | 7.3:+1901770 | None:intergenic |
ACAAACCCTAGCAGCTACAA+TGG | 0.562580 | 7.3:-1901989 | MS.gene050563:CDS |
TTGCACATTGAAGCAGAAAG+TGG | 0.564133 | 7.3:+1901866 | None:intergenic |
TAACAGCGCCATCACCAAAA+GGG | 0.569402 | 7.3:+1901642 | None:intergenic |
GGTACGAGAGCCAAAAGAGG+AGG | 0.572937 | 7.3:-1901934 | MS.gene050563:CDS |
CATGACAAATAGAAATCAAG+AGG | 0.576026 | 7.3:+1901511 | None:intergenic |
GGACAAGCACATGGAGATGG+AGG | 0.578694 | 7.3:+1901749 | None:intergenic |
ATCCCAAAGAAAGGACAAGT+TGG | 0.587746 | 7.3:+1901779 | None:intergenic |
CAGAAAGTGGTACTGGTCGA+TGG | 0.588396 | 7.3:+1901879 | None:intergenic |
GAGAAGTAGTTGTGATGTTG+CGG | 0.588969 | 7.3:+1901540 | None:intergenic |
CAAGGCTACCCCAAGCCTGA+CGG | 0.597531 | 7.3:+1901723 | None:intergenic |
ACAGGTACGAGAGCCAAAAG+AGG | 0.613687 | 7.3:-1901937 | MS.gene050563:CDS |
TGACGGAGAGGACAAGCACA+TGG | 0.624357 | 7.3:+1901740 | None:intergenic |
AATGGAAGTGATTCAAGTGG+TGG | 0.625867 | 7.3:-1901971 | MS.gene050563:CDS |
GGCGACCGATGAGAGCATCA+AGG | 0.637841 | 7.3:+1901705 | None:intergenic |
GTACGAGAGCCAAAAGAGGA+GGG | 0.648371 | 7.3:-1901933 | MS.gene050563:CDS |
GACAAGCACATGGAGATGGA+GGG | 0.652537 | 7.3:+1901750 | None:intergenic |
CTACCCCAAGCCTGACGGAG+AGG | 0.655871 | 7.3:+1901728 | None:intergenic |
TACAATGGAAGTGATTCAAG+TGG | 0.673612 | 7.3:-1901974 | MS.gene050563:CDS |
CTTGATCATAAGCAGCGCGG+AGG | 0.674942 | 7.3:+1901684 | None:intergenic |
TATGATCAAGAGATTCATGG+TGG | 0.715975 | 7.3:-1901671 | MS.gene050563:CDS |
TCTCTTGATCATAAGCAGCG+CGG | 0.775865 | 7.3:+1901681 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
TTCACTACCTTGATCAATTT+GGG | - | chr7.3:1901719-1901738 | MS.gene050563:CDS | 30.0% | |
AATCCAACTTGTCCTTTCTT+TGG | - | chr7.3:1901757-1901776 | MS.gene050563:CDS | 35.0% | |
ATCCAACTTGTCCTTTCTTT+GGG | - | chr7.3:1901758-1901777 | MS.gene050563:CDS | 35.0% | |
CAAATTGATCAAGGTAGTGA+AGG | + | chr7.3:1901720-1901739 | None:intergenic | 35.0% | |
CTTCACTACCTTGATCAATT+TGG | - | chr7.3:1901718-1901737 | MS.gene050563:CDS | 35.0% | |
GAGTTAGCTACCATAAGAAA+AGG | - | chr7.3:1901965-1901984 | MS.gene050563:CDS | 35.0% | |
GCTTATGATCAAGAGATTCA+TGG | - | chr7.3:1901865-1901884 | MS.gene050563:CDS | 35.0% | |
TACAATGGAAGTGATTCAAG+TGG | - | chr7.3:1901565-1901584 | MS.gene050563:CDS | 35.0% | |
TAGTCTTCCCAAATTGATCA+AGG | + | chr7.3:1901729-1901748 | None:intergenic | 35.0% | |
TATGATCAAGAGATTCATGG+TGG | - | chr7.3:1901868-1901887 | MS.gene050563:CDS | 35.0% | |
TGATCAATTTGGGAAGACTA+AGG | - | chr7.3:1901729-1901748 | MS.gene050563:CDS | 35.0% | |
! | TAGGTCTCTTCCTTTTCTTA+TGG | + | chr7.3:1901978-1901997 | None:intergenic | 35.0% |
! | TGTTCGTGATTTTCAGTCAA+AGG | - | chr7.3:1901936-1901955 | MS.gene050563:CDS | 35.0% |
AATGGAAGTGATTCAAGTGG+TGG | - | chr7.3:1901568-1901587 | MS.gene050563:CDS | 40.0% | |
ATCCCAAAGAAAGGACAAGT+TGG | + | chr7.3:1901763-1901782 | None:intergenic | 40.0% | |
ATTGAAGCAGAAAGTGGTAC+TGG | + | chr7.3:1901670-1901689 | None:intergenic | 40.0% | |
CTTTCTGCTTCAATGTGCAA+TGG | - | chr7.3:1901676-1901695 | MS.gene050563:CDS | 40.0% | |
GAGAAGTAGTTGTGATGTTG+CGG | + | chr7.3:1902002-1902021 | None:intergenic | 40.0% | |
GTCGATGGTTTCTTAAGTAC+TGG | + | chr7.3:1901648-1901667 | None:intergenic | 40.0% | |
TTGCACATTGAAGCAGAAAG+TGG | + | chr7.3:1901676-1901695 | None:intergenic | 40.0% | |
! | GATTTTCAGTCAAAGGCTAG+AGG | - | chr7.3:1901943-1901962 | MS.gene050563:CDS | 40.0% |
ACAAACCCTAGCAGCTACAA+TGG | - | chr7.3:1901550-1901569 | MS.gene050563:CDS | 45.0% | |
CACTTCCATTGTAGCTGCTA+GGG | + | chr7.3:1901558-1901577 | None:intergenic | 45.0% | |
GTAGTTGTGATGTTGCGGTT+AGG | + | chr7.3:1901997-1902016 | None:intergenic | 45.0% | |
TAACAGCGCCATCACCAAAA+GGG | + | chr7.3:1901900-1901919 | None:intergenic | 45.0% | |
TCACTTCCATTGTAGCTGCT+AGG | + | chr7.3:1901559-1901578 | None:intergenic | 45.0% | |
TCTCTTGATCATAAGCAGCG+CGG | + | chr7.3:1901861-1901880 | None:intergenic | 45.0% | |
! | GGAAGTAACCCTTTTGGTGA+TGG | - | chr7.3:1901889-1901908 | MS.gene050563:CDS | 45.0% |
!! | CATGGTGGAAGTAACCCTTT+TGG | - | chr7.3:1901883-1901902 | MS.gene050563:CDS | 45.0% |
ACAGGTACGAGAGCCAAAAG+AGG | - | chr7.3:1901602-1901621 | MS.gene050563:CDS | 50.0% | |
AGAGGACAAGCACATGGAGA+TGG | + | chr7.3:1901796-1901815 | None:intergenic | 50.0% | |
CTAACAGCGCCATCACCAAA+AGG | + | chr7.3:1901901-1901920 | None:intergenic | 50.0% | |
GACAAGCACATGGAGATGGA+GGG | + | chr7.3:1901792-1901811 | None:intergenic | 50.0% | |
GGGTTTGGCATCCCAAAGAA+AGG | + | chr7.3:1901772-1901791 | None:intergenic | 50.0% | |
GTACGAGAGCCAAAAGAGGA+GGG | - | chr7.3:1901606-1901625 | MS.gene050563:CDS | 50.0% | |
GTGGTGGCAACAAGATCAAC+AGG | - | chr7.3:1901584-1901603 | MS.gene050563:CDS | 50.0% | |
! | GGTAGCCTTGATGCTCTCAT+CGG | - | chr7.3:1901829-1901848 | MS.gene050563:CDS | 50.0% |
! | TGTTCCAGTCCCTCCTCTTT+TGG | + | chr7.3:1901618-1901637 | None:intergenic | 50.0% |
!! | CAGAAAGTGGTACTGGTCGA+TGG | + | chr7.3:1901663-1901682 | None:intergenic | 50.0% |
!!! | CTTTTGGTGATGGCGCTGTT+AGG | - | chr7.3:1901899-1901918 | MS.gene050563:CDS | 50.0% |
AGAGCCAAAAGAGGAGGGAC+TGG | - | chr7.3:1901611-1901630 | MS.gene050563:CDS | 55.0% | |
ATGTGCTTGTCCTCTCCGTC+AGG | - | chr7.3:1901801-1901820 | MS.gene050563:CDS | 55.0% | |
CTTGATCATAAGCAGCGCGG+AGG | + | chr7.3:1901858-1901877 | None:intergenic | 55.0% | |
GCACATGGAGATGGAGGGTT+TGG | + | chr7.3:1901787-1901806 | None:intergenic | 55.0% | |
GGACAAGCACATGGAGATGG+AGG | + | chr7.3:1901793-1901812 | None:intergenic | 55.0% | |
GGTACGAGAGCCAAAAGAGG+AGG | - | chr7.3:1901605-1901624 | MS.gene050563:CDS | 55.0% | |
TGACGGAGAGGACAAGCACA+TGG | + | chr7.3:1901802-1901821 | None:intergenic | 55.0% | |
TTGTCCTCTCCGTCAGGCTT+GGG | - | chr7.3:1901807-1901826 | MS.gene050563:CDS | 55.0% | |
CAAGGCTACCCCAAGCCTGA+CGG | + | chr7.3:1901819-1901838 | None:intergenic | 60.0% | |
CTTGTCCTCTCCGTCAGGCT+TGG | - | chr7.3:1901806-1901825 | MS.gene050563:CDS | 60.0% | |
TGTCCTCTCCGTCAGGCTTG+GGG | - | chr7.3:1901808-1901827 | MS.gene050563:CDS | 60.0% | |
!! | GGCGACCGATGAGAGCATCA+AGG | + | chr7.3:1901837-1901856 | None:intergenic | 60.0% |
CTACCCCAAGCCTGACGGAG+AGG | + | chr7.3:1901814-1901833 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 1901526 | 1902035 | 1901526 | ID=MS.gene050563 |
chr7.3 | mRNA | 1901526 | 1902035 | 1901526 | ID=MS.gene050563.t1;Parent=MS.gene050563 |
chr7.3 | exon | 1901526 | 1902035 | 1901526 | ID=MS.gene050563.t1.exon1;Parent=MS.gene050563.t1 |
chr7.3 | CDS | 1901526 | 1902035 | 1901526 | ID=cds.MS.gene050563.t1;Parent=MS.gene050563.t1 |
Gene Sequence |
Protein sequence |