AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene81613

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene81613.t1 MTR_5g085580 97.430 467 10 2 1 466 1 466 0.0 924
MS.gene81613.t1 MTR_1g056640 63.474 449 153 4 21 458 35 483 0.0 580
MS.gene81613.t1 MTR_3g080410 73.276 348 93 0 12 359 14 361 0.0 530
MS.gene81613.t1 MTR_1g031900 42.391 460 235 5 9 462 7 442 3.68e-121 363
MS.gene81613.t1 MTR_1g031900 42.358 458 234 5 9 460 7 440 4.56e-121 363
MS.gene81613.t1 MTR_6g088885 40.308 454 249 4 24 476 27 459 4.76e-120 361
MS.gene81613.t1 MTR_8g012400 39.738 458 256 6 6 459 11 452 8.48e-117 351
MS.gene81613.t1 MTR_3g065460 40.389 463 246 4 9 464 5 444 3.50e-116 350
MS.gene81613.t1 MTR_4g132280 41.913 439 229 6 24 459 45 460 4.39e-116 351
MS.gene81613.t1 MTR_7g053500 40.455 440 243 6 25 459 27 452 3.28e-115 347
MS.gene81613.t1 MTR_4g069940 40.393 458 255 5 8 459 8 453 7.79e-114 343
MS.gene81613.t1 MTR_4g088155 38.147 464 260 8 11 462 6 454 4.95e-110 333
MS.gene81613.t1 MTR_4g083500 41.403 442 249 8 23 459 43 479 9.29e-109 333
MS.gene81613.t1 MTR_3g116510 39.606 457 256 6 7 459 8 448 9.90e-109 330
MS.gene81613.t1 MTR_5g078200 38.280 465 259 4 4 464 3 443 4.16e-108 334
MS.gene81613.t1 MTR_8g085720 38.497 439 245 4 24 459 26 442 1.25e-107 328
MS.gene81613.t1 MTR_8g102340 39.278 443 204 5 24 459 28 412 7.48e-105 321
MS.gene81613.t1 MTR_5g078200 39.631 434 234 4 35 464 1 410 2.47e-104 324
MS.gene81613.t1 MTR_4g084480 45.161 372 196 4 6 376 14 378 8.35e-104 315
MS.gene81613.t1 MTR_4g084480 48.235 340 173 3 6 344 7 344 1.87e-103 314
MS.gene81613.t1 MTR_3g083580 35.991 464 266 7 7 464 7 445 2.95e-103 317
MS.gene81613.t1 MTR_4g084480 48.235 340 173 3 6 344 14 351 3.89e-103 314
MS.gene81613.t1 MTR_1g077990 50.926 324 155 4 19 341 26 346 3.20e-102 311
MS.gene81613.t1 MTR_7g026340 40.045 447 246 9 16 459 15 442 2.79e-101 311
MS.gene81613.t1 MTR_1g022160 35.560 464 258 6 24 462 24 471 6.79e-100 308
MS.gene81613.t1 MTR_1g022160 35.408 466 260 6 24 464 24 473 6.36e-99 306
MS.gene81613.t1 MTR_7g053500 40.464 388 212 6 77 459 2 375 1.38e-98 301
MS.gene81613.t1 MTR_4g010200 44.092 347 183 3 8 344 8 353 4.31e-98 300
MS.gene81613.t1 MTR_1g022160 35.217 460 257 6 24 458 24 467 1.14e-97 302
MS.gene81613.t1 MTR_8g012400 40.052 387 212 6 77 459 2 372 1.89e-97 298
MS.gene81613.t1 MTR_2g019345 47.321 336 172 5 8 341 7 339 3.58e-95 293
MS.gene81613.t1 MTR_4g052970 46.177 327 169 4 20 343 25 347 5.61e-95 292
MS.gene81613.t1 MTR_2g086530 42.982 342 189 4 4 343 8 345 3.15e-92 285
MS.gene81613.t1 MTR_2g086530 44.720 322 173 3 23 343 7 324 6.20e-92 284
MS.gene81613.t1 MTR_4g114850 45.794 321 172 2 22 341 24 343 2.58e-89 277
MS.gene81613.t1 MTR_4g114850 45.794 321 172 2 22 341 24 343 3.41e-89 276
MS.gene81613.t1 MTR_4g114850 45.794 321 172 2 22 341 24 343 7.57e-89 276
MS.gene81613.t1 MTR_1g007810 43.695 341 182 6 17 352 9 344 3.75e-87 271
MS.gene81613.t1 MTR_3g116510 42.424 330 174 4 130 459 1 314 1.11e-84 264
MS.gene81613.t1 MTR_1g022160 39.755 327 190 4 24 346 24 347 1.97e-81 258
MS.gene81613.t1 MTR_4g076570 42.056 321 179 4 21 341 19 332 2.18e-78 249
MS.gene81613.t1 MTR_4g076470 41.231 325 175 8 16 339 15 324 6.89e-77 244
MS.gene81613.t1 MTR_1g052430 43.614 321 168 7 24 341 32 342 2.06e-76 245
MS.gene81613.t1 MTR_4g076490 41.693 319 171 7 24 341 97 401 9.25e-76 244
MS.gene81613.t1 MTR_2g034480 42.308 338 180 9 6 339 9 335 4.53e-75 240
MS.gene81613.t1 MTR_4g076255 41.159 328 179 7 14 341 15 328 1.02e-74 238
MS.gene81613.t1 MTR_4g076440 41.284 327 176 8 16 341 15 326 1.59e-74 238
MS.gene81613.t1 MTR_4g076430 41.159 328 175 9 16 341 15 326 4.45e-74 236
MS.gene81613.t1 MTR_4g076500 39.936 313 179 3 21 333 75 378 5.84e-73 236
MS.gene81613.t1 MTR_7g081350 37.135 342 203 7 1 339 1 333 2.03e-69 225
MS.gene81613.t1 MTR_2g034470 39.264 326 186 8 16 339 23 338 1.76e-68 223
MS.gene81613.t1 MTR_2g027560 34.821 448 249 15 24 459 28 444 1.74e-67 224
MS.gene81613.t1 MTR_2g034470 38.907 311 179 7 31 339 2 303 2.16e-65 214
MS.gene81613.t1 MTR_4g112025 32.203 472 279 19 2 460 8 451 4.69e-64 216
MS.gene81613.t1 MTR_2g034440 38.272 324 188 8 16 337 15 328 6.19e-64 210
MS.gene81613.t1 MTR_7g081370 36.337 344 191 9 1 339 1 321 1.05e-62 207
MS.gene81613.t1 MTR_1g053320 33.120 468 272 17 6 460 12 451 1.10e-62 211
MS.gene81613.t1 MTR_1g010120 32.582 488 281 20 4 477 6 459 1.58e-59 203
MS.gene81613.t1 MTR_8g092070 31.236 445 270 17 24 459 34 451 3.64e-57 199
MS.gene81613.t1 MTR_4g124440 30.952 462 280 15 9 459 10 443 5.58e-57 196
MS.gene81613.t1 MTR_7g085390 32.222 450 260 18 24 459 26 444 3.61e-56 194
MS.gene81613.t1 MTR_3g031770 31.900 442 266 12 24 459 27 439 9.52e-56 193
MS.gene81613.t1 MTR_3g095050 32.704 477 260 22 6 460 13 450 1.50e-55 192
MS.gene81613.t1 MTR_3g108600 30.835 467 262 15 5 459 12 429 1.81e-55 192
MS.gene81613.t1 MTR_6g032820 31.749 463 269 17 5 449 4 437 5.29e-55 190
MS.gene81613.t1 MTR_4g134280 34.819 359 192 14 112 459 3 330 5.13e-45 162
MS.gene81613.t1 MTR_5g081720 32.566 304 195 6 40 340 53 349 8.85e-44 158
MS.gene81613.t1 MTR_5g015720 46.610 118 55 3 357 472 305 416 2.11e-27 114
MS.gene81613.t1 MTR_3g082080 52.326 86 40 1 381 466 157 241 1.80e-24 102
MS.gene81613.t1 MTR_8g089400 53.659 82 38 0 378 459 34 115 2.62e-24 99.4
MS.gene81613.t1 MTR_8g085390 56.471 85 36 1 380 464 29 112 5.23e-24 99.4
MS.gene81613.t1 MTR_8g089400 53.659 82 38 0 378 459 54 135 7.40e-24 98.6
MS.gene81613.t1 MTR_5g097420 53.012 83 39 0 381 463 30 112 2.12e-23 95.5
MS.gene81613.t1 MTR_3g048280 48.485 99 49 2 376 474 107 203 2.17e-23 98.2
MS.gene81613.t1 MTR_8g085400 55.000 80 32 2 380 459 32 107 9.27e-21 87.8
MS.gene81613.t1 MTR_1g084820 55.294 85 36 2 375 459 414 496 1.07e-20 95.5
MS.gene81613.t1 MTR_1g084820 55.294 85 36 2 375 459 414 496 1.36e-20 95.5
MS.gene81613.t1 MTR_7g111600 39.568 139 76 2 333 464 105 242 3.87e-20 90.1
MS.gene81613.t1 MTR_7g111600 39.568 139 76 2 333 464 105 242 5.70e-20 90.9
MS.gene81613.t1 MTR_7g111600 39.568 139 76 2 333 464 105 242 6.35e-20 90.5
MS.gene81613.t1 MTR_5g091650 47.619 84 43 1 376 459 103 185 8.53e-20 87.8
MS.gene81613.t1 MTR_5g091650 47.619 84 43 1 376 459 103 185 1.90e-19 88.6
MS.gene81613.t1 MTR_4g109490 53.165 79 35 2 381 459 24 100 4.76e-19 86.3
MS.gene81613.t1 MTR_4g133730 46.835 79 42 0 381 459 28 106 1.07e-18 82.0
MS.gene81613.t1 MTR_4g079530 46.316 95 47 1 365 459 25 115 1.36e-18 82.0
MS.gene81613.t1 MTR_8g085440 46.250 80 42 1 380 459 31 109 1.62e-18 81.6
MS.gene81613.t1 MTR_4g079530 46.316 95 47 1 365 459 25 115 1.81e-18 83.2
MS.gene81613.t1 MTR_1g116870 46.835 79 41 1 381 459 276 353 3.06e-18 86.7
MS.gene81613.t1 MTR_4g133735 46.835 79 42 0 381 459 28 106 3.16e-18 80.9
MS.gene81613.t1 MTR_2g049670 53.165 79 35 2 381 459 158 234 5.76e-18 85.1
MS.gene81613.t1 MTR_4g036775 35.507 138 84 2 204 341 43 175 5.96e-18 83.2
MS.gene81613.t1 MTR_4g036775 40.000 85 49 1 6 88 2 86 1.49e-11 64.3
MS.gene81613.t1 MTR_8g085420 45.000 80 43 1 380 459 31 109 8.59e-18 80.1
MS.gene81613.t1 MTR_4g036680 40.385 104 57 2 238 341 77 175 2.93e-17 81.3
MS.gene81613.t1 MTR_4g036680 43.056 72 41 0 17 88 15 86 3.83e-11 63.2
MS.gene81613.t1 MTR_8g088120 52.857 70 32 1 390 459 57 125 3.11e-16 78.2
MS.gene81613.t1 MTR_4g083070 44.828 87 43 3 375 458 12 96 1.24e-14 72.8
MS.gene81613.t1 MTR_5g044530 45.946 74 39 1 376 449 17 89 1.84e-14 73.6
MS.gene81613.t1 MTR_2g072500 38.750 80 47 1 380 459 7 84 2.78e-12 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene81613.t1 AT2G05790 70.953 451 124 3 20 466 21 468 0.0 664
MS.gene81613.t1 AT4G26830 62.061 456 156 4 5 458 4 444 0.0 565
MS.gene81613.t1 AT4G26830 63.636 440 145 3 19 458 24 448 0.0 562
MS.gene81613.t1 AT5G55180 62.132 441 155 2 20 460 23 451 0.0 561
MS.gene81613.t1 AT5G55180 61.521 447 159 3 20 466 23 456 0.0 558
MS.gene81613.t1 AT2G01630 41.230 439 232 3 24 459 23 438 7.79e-118 353
MS.gene81613.t1 AT2G01630 41.136 440 233 3 24 460 23 439 1.86e-117 354
MS.gene81613.t1 AT1G11820 40.682 440 235 6 24 460 44 460 3.71e-117 352
MS.gene81613.t1 AT5G56590 41.136 440 241 4 22 459 24 447 9.95e-117 352
MS.gene81613.t1 AT1G11820 40.541 444 238 6 24 464 44 464 2.72e-116 352
MS.gene81613.t1 AT4G29360 40.340 471 255 4 7 459 7 469 4.27e-116 352
MS.gene81613.t1 AT2G16230 40.045 442 246 4 24 464 25 448 4.06e-114 345
MS.gene81613.t1 AT4G29360 40.969 454 245 3 21 459 34 479 6.74e-114 346
MS.gene81613.t1 AT1G66250 40.547 439 234 4 24 459 32 446 2.70e-113 343
MS.gene81613.t1 AT3G07320 40.991 444 241 7 21 459 22 449 5.09e-111 336
MS.gene81613.t1 AT5G24318 38.344 459 263 6 3 459 9 449 1.38e-110 335
MS.gene81613.t1 AT5G24318 38.344 459 263 6 3 459 9 449 2.02e-110 335
MS.gene81613.t1 AT3G23770 39.159 452 252 6 14 458 29 464 1.80e-109 333
MS.gene81613.t1 AT4G14080 38.688 442 253 5 21 458 39 466 9.12e-108 328
MS.gene81613.t1 AT4G34480 39.783 460 252 7 3 459 4 441 1.94e-107 328
MS.gene81613.t1 AT3G13560 37.639 449 253 5 14 459 16 440 6.90e-106 325
MS.gene81613.t1 AT3G13560 37.639 449 253 5 14 459 16 440 6.90e-106 325
MS.gene81613.t1 AT3G13560 37.639 449 253 5 14 459 16 440 6.90e-106 325
MS.gene81613.t1 AT3G13560 37.639 449 253 5 14 459 16 440 6.90e-106 325
MS.gene81613.t1 AT3G13560 37.639 449 253 5 14 459 16 440 6.90e-106 325
MS.gene81613.t1 AT1G30080 49.701 334 161 4 13 341 21 352 1.70e-101 309
MS.gene81613.t1 AT1G30080 49.701 334 161 4 13 341 21 352 3.57e-101 309
MS.gene81613.t1 AT3G55430 39.301 458 237 15 11 459 18 443 2.55e-98 303
MS.gene81613.t1 AT2G01630 40.769 390 205 3 24 410 23 389 5.95e-97 298
MS.gene81613.t1 AT4G18340 45.906 342 178 4 5 341 11 350 5.26e-96 295
MS.gene81613.t1 AT2G27500 47.335 319 166 2 24 341 29 346 1.04e-95 294
MS.gene81613.t1 AT4G18340 45.906 342 178 4 5 341 11 350 1.05e-95 295
MS.gene81613.t1 AT5G42100 49.226 323 158 5 23 341 26 346 1.93e-95 295
MS.gene81613.t1 AT5G42100 49.226 323 158 5 23 341 26 346 3.33e-95 294
MS.gene81613.t1 AT2G27500 47.335 319 166 2 24 341 29 346 3.94e-95 293
MS.gene81613.t1 AT1G32860 45.342 322 171 4 23 341 28 347 3.66e-94 291
MS.gene81613.t1 AT3G15800 46.364 330 174 3 17 344 36 364 1.20e-93 290
MS.gene81613.t1 AT2G26600 44.860 321 175 2 22 341 32 351 4.10e-89 277
MS.gene81613.t1 AT5G42720 44.753 324 174 4 24 344 26 347 9.92e-88 275
MS.gene81613.t1 AT5G24318 40.762 341 195 4 3 341 9 344 1.52e-86 270
MS.gene81613.t1 AT1G11820 40.752 319 185 3 24 339 44 361 1.34e-85 268
MS.gene81613.t1 AT4G34480 41.860 344 195 4 3 343 4 345 1.99e-84 264
MS.gene81613.t1 AT4G34480 43.143 350 175 6 112 459 3 330 1.61e-83 263
MS.gene81613.t1 AT5G24318 39.755 327 180 3 133 459 1 310 2.82e-83 260
MS.gene81613.t1 AT2G39640 35.371 458 261 14 4 459 12 436 1.02e-79 258
MS.gene81613.t1 AT2G39640 34.783 92 58 2 373 464 453 542 2.70e-12 69.3
MS.gene81613.t1 AT2G27500 45.896 268 143 2 75 341 2 268 1.99e-74 237
MS.gene81613.t1 AT4G16260 39.481 347 198 9 4 350 5 339 4.41e-74 237
MS.gene81613.t1 AT3G46570 42.478 339 182 10 9 341 11 342 1.47e-72 233
MS.gene81613.t1 AT3G57270 40.062 322 184 6 21 341 24 337 7.88e-72 231
MS.gene81613.t1 AT5G20390 41.176 323 179 8 21 341 30 343 5.33e-71 229
MS.gene81613.t1 AT4G16260 40.000 320 181 8 31 350 2 310 4.64e-70 226
MS.gene81613.t1 AT3G61810 38.390 323 186 4 24 341 55 369 3.58e-68 223
MS.gene81613.t1 AT3G24330 33.553 456 263 16 16 459 31 458 4.34e-68 226
MS.gene81613.t1 AT2G26600 43.426 251 140 2 92 341 8 257 1.31e-66 216
MS.gene81613.t1 AT4G17180 34.273 461 257 16 9 459 10 434 2.40e-65 218
MS.gene81613.t1 AT3G57260 40.187 321 179 7 21 341 29 336 4.73e-65 213
MS.gene81613.t1 AT3G57260 40.187 321 179 7 21 341 45 352 7.59e-65 213
MS.gene81613.t1 AT5G20340 40.841 333 177 10 16 341 34 353 1.26e-63 210
MS.gene81613.t1 AT1G77780 38.415 328 189 8 18 341 14 332 2.79e-63 209
MS.gene81613.t1 AT5G20330 40.606 330 177 9 18 341 28 344 8.07e-63 208
MS.gene81613.t1 AT5G18220 31.557 469 271 17 10 460 14 450 7.63e-61 207
MS.gene81613.t1 AT3G57240 37.771 323 187 8 19 341 30 338 9.71e-60 199
MS.gene81613.t1 AT1G64760 32.680 459 247 18 24 460 25 443 2.51e-59 202
MS.gene81613.t1 AT1G64760 32.680 459 247 18 24 460 25 443 2.51e-59 202
MS.gene81613.t1 AT1G33220 38.922 334 179 9 6 326 8 329 8.80e-59 197
MS.gene81613.t1 AT1G77790 38.272 324 189 8 21 341 26 341 1.28e-58 197
MS.gene81613.t1 AT4G31140 31.847 471 270 19 6 459 6 442 1.62e-57 198
MS.gene81613.t1 AT2G19440 30.998 471 279 18 4 460 1 439 1.13e-56 195
MS.gene81613.t1 AT2G19440 30.998 471 279 18 4 460 1 439 1.13e-56 195
MS.gene81613.t1 AT3G04010 30.342 468 277 18 10 460 17 452 3.72e-55 192
MS.gene81613.t1 AT5G58090 31.579 456 260 17 21 459 19 439 2.07e-52 184
MS.gene81613.t1 AT5G58480 31.910 445 264 13 24 460 26 439 4.22e-52 183
MS.gene81613.t1 AT5G64790 30.482 456 274 19 11 453 14 439 9.02e-52 182
MS.gene81613.t1 AT5G20870 30.818 477 278 19 6 462 12 456 4.21e-48 173
MS.gene81613.t1 AT5G20560 31.889 323 211 7 12 333 22 336 5.02e-46 163
MS.gene81613.t1 AT3G55780 31.169 308 203 6 37 340 48 350 1.38e-45 163
MS.gene81613.t1 AT5G67460 28.800 375 195 12 92 461 66 373 1.82e-33 130
MS.gene81613.t1 AT5G67460 28.460 383 196 13 92 469 66 375 7.80e-33 129
MS.gene81613.t1 AT4G05430 48.387 93 48 0 368 460 35 127 7.70e-25 99.8
MS.gene81613.t1 AT1G79480 58.228 79 32 1 381 459 310 387 1.16e-23 103
MS.gene81613.t1 AT1G79480 58.228 79 32 1 381 459 311 388 1.16e-23 103
MS.gene81613.t1 AT5G35740 53.012 83 38 1 381 462 30 112 2.99e-23 95.1
MS.gene81613.t1 AT4G05430 51.220 82 40 0 378 459 20 101 4.35e-23 95.5
MS.gene81613.t1 AT4G05430 51.220 82 40 0 378 459 45 126 6.32e-23 95.9
MS.gene81613.t1 AT1G29380 56.098 82 35 1 381 462 148 228 2.78e-22 95.5
MS.gene81613.t1 AT1G29380 56.098 82 35 1 381 462 148 228 2.78e-22 95.5
MS.gene81613.t1 AT1G29380 55.422 83 36 1 381 463 148 229 9.44e-22 96.3
MS.gene81613.t1 AT1G29380 55.422 83 36 1 381 463 148 229 1.11e-21 94.7
MS.gene81613.t1 AT1G66870 47.727 88 46 0 377 464 22 109 1.19e-21 90.5
MS.gene81613.t1 AT1G66870 47.727 88 46 0 377 464 49 136 1.28e-21 91.3
MS.gene81613.t1 AT2G30933 55.000 80 35 1 380 459 81 159 1.35e-21 91.7
MS.gene81613.t1 AT2G30933 55.000 80 35 1 380 459 81 159 1.35e-21 91.7
MS.gene81613.t1 AT4G13600 54.762 84 37 1 381 464 61 143 2.14e-21 93.2
MS.gene81613.t1 AT2G30933 54.321 81 36 1 379 459 80 159 3.86e-21 92.4
MS.gene81613.t1 AT2G04910 48.315 89 45 1 372 460 7 94 1.03e-20 88.2
MS.gene81613.t1 AT5G63225 45.055 91 49 1 377 467 21 110 2.68e-20 86.7
MS.gene81613.t1 AT2G04910 46.739 92 48 1 372 463 7 97 8.92e-20 84.7
MS.gene81613.t1 AT1G09460 50.000 92 43 2 373 464 129 217 4.92e-19 88.6
MS.gene81613.t1 AT4G09462 42.045 88 50 1 372 459 20 106 3.05e-18 80.9
MS.gene81613.t1 AT5G53600 41.667 84 47 1 376 459 24 105 4.20e-18 80.5
MS.gene81613.t1 AT4G09465 43.373 83 46 1 377 459 27 108 9.52e-18 79.3
MS.gene81613.t1 AT1G18650 43.373 83 46 1 377 459 17 98 1.05e-17 79.7
MS.gene81613.t1 AT4G09467 43.373 83 46 1 377 459 27 108 1.14e-17 79.3
MS.gene81613.t1 AT4G09464 43.373 83 46 1 377 459 27 108 1.14e-17 79.3
MS.gene81613.t1 AT1G18650 44.444 81 44 1 379 459 19 98 1.35e-17 81.3
MS.gene81613.t1 AT1G66852 45.783 83 44 1 377 459 22 103 1.69e-17 78.6
MS.gene81613.t1 AT2G29735 42.529 87 48 2 381 466 31 116 2.18e-17 78.6
MS.gene81613.t1 AT1G66855 41.463 82 48 0 378 459 23 104 2.21e-17 78.2
MS.gene81613.t1 AT4G09466 43.373 83 46 1 377 459 27 108 2.61e-17 78.2
MS.gene81613.t1 AT4G16165 40.476 84 50 0 376 459 21 104 2.72e-17 78.2
MS.gene81613.t1 AT5G53610 43.373 83 45 1 377 459 24 104 8.46e-17 76.6
MS.gene81613.t1 AT3G58100 42.500 80 46 0 381 460 41 120 4.20e-16 76.6
MS.gene81613.t1 AT5G63230 38.462 91 55 1 377 467 22 111 4.47e-16 74.7
MS.gene81613.t1 AT3G58100 42.500 80 46 0 381 460 117 196 8.68e-16 77.8
MS.gene81613.t1 AT4G09090 46.053 76 39 2 381 455 31 105 1.49e-15 73.2
MS.gene81613.t1 AT5G63250 42.222 90 50 2 381 468 42 131 2.34e-15 73.2
MS.gene81613.t1 AT5G61130 41.250 80 46 1 380 459 20 98 4.66e-15 74.3
MS.gene81613.t1 AT2G43670 36.364 88 54 1 377 464 31 116 7.59e-15 71.2
MS.gene81613.t1 AT1G78520 40.000 80 46 1 380 459 31 108 1.46e-14 70.5
MS.gene81613.t1 AT1G26450 50.000 66 32 1 388 453 27 91 2.13e-14 72.4
MS.gene81613.t1 AT5G08000 42.353 85 48 1 375 459 34 117 6.39e-14 71.2
MS.gene81613.t1 AT1G69295 48.571 70 35 1 393 462 32 100 2.51e-13 69.7
MS.gene81613.t1 AT5G63240 37.778 90 54 1 381 468 40 129 3.12e-13 67.0
MS.gene81613.t1 AT1G69295 48.571 70 35 1 393 462 28 96 3.74e-13 68.9
MS.gene81613.t1 AT5G08000 42.169 83 47 1 377 459 17 98 3.74e-13 68.6
MS.gene81613.t1 AT1G13830 40.244 82 48 1 378 459 32 112 3.79e-13 68.9
MS.gene81613.t1 AT1G13830 40.506 79 46 1 381 459 21 98 7.27e-13 67.8
MS.gene81613.t1 AT2G42930 38.372 86 51 2 381 466 40 123 1.83e-12 65.1
MS.gene81613.t1 AT2G03505 36.250 80 50 1 380 459 20 98 1.89e-11 61.6
MS.gene81613.t1 AT2G03505 36.250 80 50 1 380 459 20 98 2.38e-11 62.8
MS.gene81613.t1 AT2G03505 36.250 80 50 1 380 459 20 98 2.38e-11 62.8
MS.gene81613.t1 AT2G03505 36.250 80 50 1 380 459 20 98 2.38e-11 62.8

Find 102 sgRNAs with CRISPR-Local

Find 141 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCGACAGTGAGTTTGATTT+TGG 0.204771 5.1:+67589255 None:intergenic
AACTCTTACCCTTCTTCTTC+CGG 0.243510 5.1:-67588977 MS.gene81613:CDS
CCCATTGCTCTTTCTGCTCT+TGG 0.246418 5.1:-67589001 MS.gene81613:CDS
TCACCTGCTTCACCGGTTTC+CGG 0.260147 5.1:-67588395 MS.gene81613:CDS
GCTGGTGGAAGTTGCTATTT+TGG 0.265592 5.1:-67588140 MS.gene81613:CDS
TTCAAAGCCTCCACGGTTAA+AGG 0.265647 5.1:+67588437 None:intergenic
GCATGTGCAACCAATGTATT+AGG 0.306046 5.1:+67588203 None:intergenic
TTGTAAACTTTCTTCTCATC+AGG 0.316572 5.1:+67588464 None:intergenic
AACGTCGTCGTTTCGGAAAC+GGG 0.333129 5.1:-67588692 MS.gene81613:CDS
CGATATAAACGTCGTCGTTT+CGG 0.341454 5.1:-67588699 MS.gene81613:CDS
TTTGTTAGATTCTTGTAATA+AGG 0.344241 5.1:-67588051 MS.gene81613:CDS
AGGTATTTCGTCGAGTTGTT+TGG 0.344374 5.1:+67589097 None:intergenic
TTGCTGCTGCAAAGAGTTGT+TGG 0.357391 5.1:+67589224 None:intergenic
AACAGCAATGGCTTCTATAA+TGG 0.358498 5.1:+67589141 None:intergenic
ACTCTTACCCTTCTTCTTCC+GGG 0.359608 5.1:-67588976 MS.gene81613:CDS
TGCAACACACCACGTGTTCC+CGG 0.361513 5.1:+67588331 None:intergenic
ATCAGTTCTCCGTGCATTAT+CGG 0.368659 5.1:-67589281 MS.gene81613:CDS
CAACGCTGATGTTATCTCAT+TGG 0.374159 5.1:-67588843 MS.gene81613:CDS
CGTAAGATCTTGACATCAAA+AGG 0.380025 5.1:-67588593 MS.gene81613:CDS
AAACGTCGTCGTTTCGGAAA+CGG 0.380698 5.1:-67588693 MS.gene81613:CDS
GTCAGGTGGATGCGGGTAAC+GGG 0.390822 5.1:-67588793 MS.gene81613:CDS
CCTACTTCAGAAAGAAACTT+TGG 0.391839 5.1:-67588497 MS.gene81613:CDS
GGTCAGGTGGATGCGGGTAA+CGG 0.402489 5.1:-67588794 MS.gene81613:CDS
CCAAAGTTTCTTTCTGAAGT+AGG 0.404695 5.1:+67588497 None:intergenic
CTACTTCAGAAAGAAACTTT+GGG 0.413072 5.1:-67588496 MS.gene81613:CDS
TCAGTTCTCCGTGCATTATC+GGG 0.438522 5.1:-67589280 MS.gene81613:CDS
CGTCGATTTGAGCGTCGAAA+AGG 0.448575 5.1:+67588756 None:intergenic
AAAACGGTGAGTTCTGCTTT+GGG 0.454292 5.1:+67588557 None:intergenic
ACCACCACTACCACCGCCAC+CGG 0.454349 5.1:+67588376 None:intergenic
GTTTCCGGTGGCGGTGGTAG+TGG 0.455031 5.1:-67588380 MS.gene81613:CDS
CTACCACCGCCACCGGAAAC+CGG 0.455497 5.1:+67588383 None:intergenic
AGTTCTGCTTTGGGCCTAAG+TGG 0.458606 5.1:+67588566 None:intergenic
GCTTCACCGGTTTCCGGTGG+CGG 0.458847 5.1:-67588389 MS.gene81613:CDS
TAATCTTCATAATGATATCA+AGG 0.459345 5.1:-67589032 MS.gene81613:CDS
GTTCTGCTTTGGGCCTAAGT+GGG 0.459877 5.1:+67588567 None:intergenic
TTCATTGCTCTCACAAATGC+TGG 0.468047 5.1:-67589418 MS.gene81613:CDS
CTTCTATAATGGTGTTCGGT+TGG 0.480558 5.1:+67589152 None:intergenic
ATTATAGAAGCCATTGCTGT+TGG 0.480731 5.1:-67589139 MS.gene81613:CDS
CGGAATGACCCGGAAGAAGA+AGG 0.481349 5.1:+67588968 None:intergenic
TTTAATGAAAATCAAAAGCC+CGG 0.481671 5.1:-67588521 MS.gene81613:CDS
TGCTGCAAAGAGTTGTTGGT+TGG 0.483787 5.1:+67589228 None:intergenic
CCACCGGAAACCGGTGAAGC+AGG 0.489913 5.1:+67588392 None:intergenic
GTTTCTTTCTGAAGTAGGCC+CGG 0.494834 5.1:+67588502 None:intergenic
ATGGCTTCTATAATGGTGTT+CGG 0.494847 5.1:+67589148 None:intergenic
GGTGGCGGTGGTAGTGGTGG+TGG 0.495941 5.1:-67588374 MS.gene81613:CDS
TCACCGGTTTCCGGTGGCGG+TGG 0.502690 5.1:-67588386 MS.gene81613:CDS
CTCACAAATGCTGGCAACAT+AGG 0.503433 5.1:-67589409 MS.gene81613:CDS
GGCGGTGGTAGTGGTGGTGG+TGG 0.506515 5.1:-67588371 MS.gene81613:CDS
CCAAGAGCAGAAAGAGCAAT+GGG 0.510634 5.1:+67589001 None:intergenic
CAATAGTTATTATCAGAAGC+AGG 0.514935 5.1:-67588168 MS.gene81613:CDS
TCCGGTGGCGGTGGTAGTGG+TGG 0.519947 5.1:-67588377 MS.gene81613:CDS
GATAATGCACGGAGAACTGA+TGG 0.520546 5.1:+67589283 None:intergenic
TATCAGAAGCAGGCACGTGC+TGG 0.522733 5.1:-67588158 MS.gene81613:CDS
GAAGGTGAGGTAGATGAAGA+AGG 0.523264 5.1:+67589438 None:intergenic
AAACCGGTGAAGCAGGTGAC+GGG 0.526912 5.1:+67588399 None:intergenic
AACTTCATTTCCAACAGCAA+TGG 0.527788 5.1:+67589129 None:intergenic
AACCCGGGTCAGGTGGATGC+GGG 0.529367 5.1:-67588800 MS.gene81613:CDS
TGACCCGTCACCTGCTTCAC+CGG 0.530441 5.1:-67588402 MS.gene81613:CDS
GCTGCAAAGAGTTGTTGGTT+GGG 0.533883 5.1:+67589229 None:intergenic
GTGATTATAGAATACTTACT+AGG 0.543025 5.1:+67588089 None:intergenic
GTTAACCATGAGATAAGATC+CGG 0.543062 5.1:+67588892 None:intergenic
TTTCTTTCTGAAGTAGGCCC+GGG 0.544508 5.1:+67588503 None:intergenic
AAACCCGGGTCAGGTGGATG+CGG 0.547489 5.1:-67588801 MS.gene81613:CDS
CAGAAGCAGGCACGTGCTGG+TGG 0.548369 5.1:-67588155 MS.gene81613:CDS
TCACGAAGAAAATCAAGCAT+GGG 0.551379 5.1:+67588917 None:intergenic
CAATGAGATAACATCAGCGT+TGG 0.551648 5.1:+67588844 None:intergenic
TTCACGAAGAAAATCAAGCA+TGG 0.551918 5.1:+67588916 None:intergenic
AAAACGGGTTGGATTAACTC+GGG 0.554685 5.1:+67588944 None:intergenic
TTACCCGCATCCACCTGACC+CGG 0.556109 5.1:+67588797 None:intergenic
TTCTGCTTTGGGCCTAAGTG+GGG 0.556247 5.1:+67588568 None:intergenic
AGCATTTGTGAGAGCAATGA+AGG 0.561284 5.1:+67589420 None:intergenic
CATCAAAAGGGACCCCACTT+AGG 0.562771 5.1:-67588580 MS.gene81613:CDS
ACCAAGAGCAGAAAGAGCAA+TGG 0.563188 5.1:+67589000 None:intergenic
TTACAATGTTCCTTTAACCG+TGG 0.565146 5.1:-67588447 MS.gene81613:CDS
TGTAAACTTTCTTCTCATCA+GGG 0.566166 5.1:+67588465 None:intergenic
TCATTACCATCACCTTTCGA+AGG 0.568639 5.1:+67588665 None:intergenic
TCGTGAAAACCCGGGTCAGG+TGG 0.572472 5.1:-67588807 MS.gene81613:CDS
GGTGTTTCGAAGAGTACCAC+CGG 0.573726 5.1:-67588350 MS.gene81613:CDS
GAAACGGGTTGGCCTTCGAA+AGG 0.578195 5.1:-67588677 MS.gene81613:CDS
TACCCGCATCCACCTGACCC+GGG 0.585848 5.1:+67588798 None:intergenic
CGGGTTGGATTAACTCGGGT+CGG 0.591139 5.1:+67588948 None:intergenic
CAATGTTCCTTTAACCGTGG+AGG 0.594166 5.1:-67588444 MS.gene81613:CDS
AAGCAGGTGACGGGTCATCA+TGG 0.594336 5.1:+67588408 None:intergenic
TGAAACCGGATCTTATCTCA+TGG 0.596302 5.1:-67588897 MS.gene81613:CDS
GGTTGGCCTTCGAAAGGTGA+TGG 0.601053 5.1:-67588671 MS.gene81613:CDS
TTAATGAAAATCAAAAGCCC+GGG 0.602994 5.1:-67588520 MS.gene81613:CDS
TCGTCGTTTCGGAAACGGGT+TGG 0.611751 5.1:-67588688 MS.gene81613:CDS
CCTGCTTCACCGGTTTCCGG+TGG 0.614424 5.1:-67588392 MS.gene81613:CDS
GGAATGACCCGGAAGAAGAA+GGG 0.615815 5.1:+67588969 None:intergenic
GAAACCGGTGAAGCAGGTGA+CGG 0.618354 5.1:+67588398 None:intergenic
GTAAGATCTTGACATCAAAA+GGG 0.619770 5.1:-67588592 MS.gene81613:CDS
TAACTCGGGTCGGAATGACC+CGG 0.634539 5.1:+67588958 None:intergenic
TTGTGAGAGCAATGAAGGTG+AGG 0.642713 5.1:+67589425 None:intergenic
GAAAGGTGATGGTAATGAAG+TGG 0.650157 5.1:-67588660 MS.gene81613:CDS
GGCAACATAGGCATAAACTA+CGG 0.652226 5.1:-67589397 MS.gene81613:CDS
AGAGTACCACCGGGAACACG+TGG 0.659760 5.1:-67588340 MS.gene81613:CDS
AAAGGTGATGGTAATGAAGT+GGG 0.661071 5.1:-67588659 MS.gene81613:CDS
ATAATGCACGGAGAACTGAT+GGG 0.684088 5.1:+67589284 None:intergenic
GTTCAACTCCTAAAATCACA+AGG 0.702475 5.1:-67589337 MS.gene81613:CDS
GTGTTTCGAAGAGTACCACC+GGG 0.715327 5.1:-67588349 MS.gene81613:CDS
AACACACCACGTGTTCCCGG+TGG 0.717928 5.1:+67588334 None:intergenic
TGTATTAGGATCAAAACACG+TGG 0.735386 5.1:+67588217 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAACAAAAAACAATGAGAAA+AGG + chr5.1:67589442-67589461 None:intergenic 20.0%
!! TAATCTTCATAATGATATCA+AGG - chr5.1:67588474-67588493 MS.gene81613:CDS 20.0%
!! TTTGTTAGATTCTTGTAATA+AGG - chr5.1:67589455-67589474 MS.gene81613:CDS 20.0%
!!! AAAAAGTGCGAATAAAAAAA+CGG + chr5.1:67588968-67588987 None:intergenic 20.0%
! GTGATTATAGAATACTTACT+AGG + chr5.1:67589420-67589439 None:intergenic 25.0%
! TTTAATGAAAATCAAAAGCC+CGG - chr5.1:67588985-67589004 MS.gene81613:CDS 25.0%
!!! ATCTTGTAGCTTAGTTTTAT+CGG + chr5.1:67589211-67589230 None:intergenic 25.0%
ATCAAGCATGGGTTTAAAAA+CGG + chr5.1:67588581-67588600 None:intergenic 30.0%
CAATAGTTATTATCAGAAGC+AGG - chr5.1:67589338-67589357 MS.gene81613:CDS 30.0%
CTACTTCAGAAAGAAACTTT+GGG - chr5.1:67589010-67589029 MS.gene81613:CDS 30.0%
GTAAGATCTTGACATCAAAA+GGG - chr5.1:67588914-67588933 MS.gene81613:CDS 30.0%
TGTAAACTTTCTTCTCATCA+GGG + chr5.1:67589044-67589063 None:intergenic 30.0%
TTAATGAAAATCAAAAGCCC+GGG - chr5.1:67588986-67589005 MS.gene81613:CDS 30.0%
TTGGACTCATAAGCAAAAAA+CGG + chr5.1:67588646-67588665 None:intergenic 30.0%
TTGTAAACTTTCTTCTCATC+AGG + chr5.1:67589045-67589064 None:intergenic 30.0%
! CGATCTGTAAATGTTTTTCA+TGG + chr5.1:67588443-67588462 None:intergenic 30.0%
! CTTTTGATGTCAAGATCTTA+CGG + chr5.1:67588915-67588934 None:intergenic 30.0%
! TCTGTAAATGTTTTTCATGG+CGG + chr5.1:67588440-67588459 None:intergenic 30.0%
!!! GTGTTTTGATCCTAATACAT+TGG - chr5.1:67589293-67589312 MS.gene81613:CDS 30.0%
AACAGCAATGGCTTCTATAA+TGG + chr5.1:67588368-67588387 None:intergenic 35.0%
AACTTCATTTCCAACAGCAA+TGG + chr5.1:67588380-67588399 None:intergenic 35.0%
ATGGCTTCTATAATGGTGTT+CGG + chr5.1:67588361-67588380 None:intergenic 35.0%
ATTATAGAAGCCATTGCTGT+TGG - chr5.1:67588367-67588386 MS.gene81613:CDS 35.0%
CCTACTTCAGAAAGAAACTT+TGG - chr5.1:67589009-67589028 MS.gene81613:CDS 35.0%
CGTAAGATCTTGACATCAAA+AGG - chr5.1:67588913-67588932 MS.gene81613:CDS 35.0%
GTTAACCATGAGATAAGATC+CGG + chr5.1:67588617-67588636 None:intergenic 35.0%
GTTCAACTCCTAAAATCACA+AGG - chr5.1:67588169-67588188 MS.gene81613:CDS 35.0%
TCAAGCATGGGTTTAAAAAC+GGG + chr5.1:67588580-67588599 None:intergenic 35.0%
TCACGAAGAAAATCAAGCAT+GGG + chr5.1:67588592-67588611 None:intergenic 35.0%
TGGACTCATAAGCAAAAAAC+GGG + chr5.1:67588645-67588664 None:intergenic 35.0%
TGTATTAGGATCAAAACACG+TGG + chr5.1:67589292-67589311 None:intergenic 35.0%
TTACAATGTTCCTTTAACCG+TGG - chr5.1:67589059-67589078 MS.gene81613:CDS 35.0%
TTCACGAAGAAAATCAAGCA+TGG + chr5.1:67588593-67588612 None:intergenic 35.0%
! AAAGGTGATGGTAATGAAGT+GGG - chr5.1:67588847-67588866 MS.gene81613:CDS 35.0%
! CTGTAAATGTTTTTCATGGC+GGG + chr5.1:67588439-67588458 None:intergenic 35.0%
! CTTGATTTTCTTCGTGAAAC+CGG - chr5.1:67588595-67588614 MS.gene81613:CDS 35.0%
! GGGTTATACCTTGTGATTTT+AGG + chr5.1:67588180-67588199 None:intergenic 35.0%
! TCAATCTTTTGCACTCTCAT+GGG - chr5.1:67588309-67588328 MS.gene81613:CDS 35.0%
! TTAGATTTTGCTTGTGGTGA+GGG - chr5.1:67589234-67589253 MS.gene81613:CDS 35.0%
! TTTAGATTTTGCTTGTGGTG+AGG - chr5.1:67589233-67589252 MS.gene81613:CDS 35.0%
!! AAAAACGGGTTGGATTAACT+CGG + chr5.1:67588566-67588585 None:intergenic 35.0%
!! ATCGACAGTGAGTTTGATTT+TGG + chr5.1:67588254-67588273 None:intergenic 35.0%
!! CCAAAGTTTCTTTCTGAAGT+AGG + chr5.1:67589012-67589031 None:intergenic 35.0%
!! GATGCTTTAGATTTTGCTTG+TGG - chr5.1:67589228-67589247 MS.gene81613:CDS 35.0%
!! GTAATTTTTCAAAGCCTCCA+CGG + chr5.1:67589079-67589098 None:intergenic 35.0%
!! TGAACTACTTTTGTTGCTGA+GGG + chr5.1:67588154-67588173 None:intergenic 35.0%
!! TGTGTCGTAGATTTTGACAT+GGG + chr5.1:67588200-67588219 None:intergenic 35.0%
!! TTGAACTACTTTTGTTGCTG+AGG + chr5.1:67588155-67588174 None:intergenic 35.0%
!!! AGCTTAGTTTTATCGGCATA+AGG + chr5.1:67589204-67589223 None:intergenic 35.0%
AAAAACGGTGAGTTCTGCTT+TGG + chr5.1:67588953-67588972 None:intergenic 40.0%
AAAACGGTGAGTTCTGCTTT+GGG + chr5.1:67588952-67588971 None:intergenic 40.0%
AACTCTTACCCTTCTTCTTC+CGG - chr5.1:67588529-67588548 MS.gene81613:CDS 40.0%
AGCATTTGTGAGAGCAATGA+AGG + chr5.1:67588089-67588108 None:intergenic 40.0%
ATAATGCACGGAGAACTGAT+GGG + chr5.1:67588225-67588244 None:intergenic 40.0%
ATCAGTTCTCCGTGCATTAT+CGG - chr5.1:67588225-67588244 MS.gene81613:CDS 40.0%
CAACGCTGATGTTATCTCAT+TGG - chr5.1:67588663-67588682 MS.gene81613:CDS 40.0%
CAATGAGATAACATCAGCGT+TGG + chr5.1:67588665-67588684 None:intergenic 40.0%
CGATATAAACGTCGTCGTTT+CGG - chr5.1:67588807-67588826 MS.gene81613:CDS 40.0%
CTTCTATAATGGTGTTCGGT+TGG + chr5.1:67588357-67588376 None:intergenic 40.0%
GCATGTGCAACCAATGTATT+AGG + chr5.1:67589306-67589325 None:intergenic 40.0%
GGCAACATAGGCATAAACTA+CGG - chr5.1:67588109-67588128 MS.gene81613:CDS 40.0%
TCATTACCATCACCTTTCGA+AGG + chr5.1:67588844-67588863 None:intergenic 40.0%
TGAAACCGGATCTTATCTCA+TGG - chr5.1:67588609-67588628 MS.gene81613:CDS 40.0%
TTCATTGCTCTCACAAATGC+TGG - chr5.1:67588088-67588107 MS.gene81613:CDS 40.0%
! AGGTATTTCGTCGAGTTGTT+TGG + chr5.1:67588412-67588431 None:intergenic 40.0%
! CTCAATCTTTTGCACTCTCA+TGG - chr5.1:67588308-67588327 MS.gene81613:CDS 40.0%
! GAAAGGTGATGGTAATGAAG+TGG - chr5.1:67588846-67588865 MS.gene81613:CDS 40.0%
!! AAAACGGGTTGGATTAACTC+GGG + chr5.1:67588565-67588584 None:intergenic 40.0%
!! CTGTGTCGTAGATTTTGACA+TGG + chr5.1:67588201-67588220 None:intergenic 40.0%
!! TGCTCTTTTTCGTGAAAACC+CGG - chr5.1:67588690-67588709 MS.gene81613:CDS 40.0%
!!! CACGTGGCATTGTTTTGAAT+CGG + chr5.1:67589276-67589295 None:intergenic 40.0%
!!! TGGCATTGTTTTGAATCGGA+CGG + chr5.1:67589272-67589291 None:intergenic 40.0%
!!! TTTTGGAACCCGATAATGCA+CGG + chr5.1:67588237-67588256 None:intergenic 40.0%
AAACGTCGTCGTTTCGGAAA+CGG - chr5.1:67588813-67588832 MS.gene81613:CDS 45.0%
ACCAAGAGCAGAAAGAGCAA+TGG + chr5.1:67588509-67588528 None:intergenic 45.0%
ACTCTTACCCTTCTTCTTCC+GGG - chr5.1:67588530-67588549 MS.gene81613:CDS 45.0%
CAATGTTCCTTTAACCGTGG+AGG - chr5.1:67589062-67589081 MS.gene81613:CDS 45.0%
CCAAGAGCAGAAAGAGCAAT+GGG + chr5.1:67588508-67588527 None:intergenic 45.0%
CTCACAAATGCTGGCAACAT+AGG - chr5.1:67588097-67588116 MS.gene81613:CDS 45.0%
GAAGGTGAGGTAGATGAAGA+AGG + chr5.1:67588071-67588090 None:intergenic 45.0%
GATAATGCACGGAGAACTGA+TGG + chr5.1:67588226-67588245 None:intergenic 45.0%
GCATGGGTTTAAAAACGGGT+TGG + chr5.1:67588576-67588595 None:intergenic 45.0%
TCAGTTCTCCGTGCATTATC+GGG - chr5.1:67588226-67588245 MS.gene81613:CDS 45.0%
TGCTGCAAAGAGTTGTTGGT+TGG + chr5.1:67588281-67588300 None:intergenic 45.0%
TTCAAAGCCTCCACGGTTAA+AGG + chr5.1:67589072-67589091 None:intergenic 45.0%
TTGCTGCTGCAAAGAGTTGT+TGG + chr5.1:67588285-67588304 None:intergenic 45.0%
TTGTGAGAGCAATGAAGGTG+AGG + chr5.1:67588084-67588103 None:intergenic 45.0%
! GCTGCAAAGAGTTGTTGGTT+GGG + chr5.1:67588280-67588299 None:intergenic 45.0%
!! CTACTTTTGTTGCTGAGGGT+AGG + chr5.1:67588150-67588169 None:intergenic 45.0%
!! GCTCTTTTTCGTGAAAACCC+GGG - chr5.1:67588691-67588710 MS.gene81613:CDS 45.0%
!! GTTTCTTTCTGAAGTAGGCC+CGG + chr5.1:67589007-67589026 None:intergenic 45.0%
!! TTTCTTTCTGAAGTAGGCCC+GGG + chr5.1:67589006-67589025 None:intergenic 45.0%
!! TTTTGGTGGTACGTCGTATG+TGG - chr5.1:67589383-67589402 MS.gene81613:CDS 45.0%
!!! GCTGGTGGAAGTTGCTATTT+TGG - chr5.1:67589366-67589385 MS.gene81613:CDS 45.0%
!!! GGTGGAAGTTGCTATTTTGG+TGG - chr5.1:67589369-67589388 MS.gene81613:CDS 45.0%
AACGTCGTCGTTTCGGAAAC+GGG - chr5.1:67588814-67588833 MS.gene81613:CDS 50.0%
CATCAAAAGGGACCCCACTT+AGG - chr5.1:67588926-67588945 MS.gene81613:CDS 50.0%
CCCATTGCTCTTTCTGCTCT+TGG - chr5.1:67588505-67588524 MS.gene81613:CDS 50.0%
GGAATGACCCGGAAGAAGAA+GGG + chr5.1:67588540-67588559 None:intergenic 50.0%
! AGTTCTGCTTTGGGCCTAAG+TGG + chr5.1:67588943-67588962 None:intergenic 50.0%
! GATTTTGCTTGTGGTGAGGG+TGG - chr5.1:67589237-67589256 MS.gene81613:CDS 50.0%
! GTTCTGCTTTGGGCCTAAGT+GGG + chr5.1:67588942-67588961 None:intergenic 50.0%
! TTCTGCTTTGGGCCTAAGTG+GGG + chr5.1:67588941-67588960 None:intergenic 50.0%
! TTTTCGTGAAAACCCGGGTC+AGG - chr5.1:67588696-67588715 MS.gene81613:CDS 50.0%
!! CGTCGATTTGAGCGTCGAAA+AGG + chr5.1:67588753-67588772 None:intergenic 50.0%
!! GGTGTTTCGAAGAGTACCAC+CGG - chr5.1:67589156-67589175 MS.gene81613:CDS 50.0%
!! GTGTTTCGAAGAGTACCACC+GGG - chr5.1:67589157-67589176 MS.gene81613:CDS 50.0%
!!! TGTTTTTCATGGCGGGTACG+AGG + chr5.1:67588432-67588451 None:intergenic 50.0%
AAACCGGTGAAGCAGGTGAC+GGG + chr5.1:67589110-67589129 None:intergenic 55.0%
CGGAATGACCCGGAAGAAGA+AGG + chr5.1:67588541-67588560 None:intergenic 55.0%
GAAACCGGTGAAGCAGGTGA+CGG + chr5.1:67589111-67589130 None:intergenic 55.0%
TAACTCGGGTCGGAATGACC+CGG + chr5.1:67588551-67588570 None:intergenic 55.0%
TATCAGAAGCAGGCACGTGC+TGG - chr5.1:67589348-67589367 MS.gene81613:CDS 55.0%
TCGTCGTTTCGGAAACGGGT+TGG - chr5.1:67588818-67588837 MS.gene81613:CDS 55.0%
TGCAACACACCACGTGTTCC+CGG + chr5.1:67589178-67589197 None:intergenic 55.0%
! CGGGTTGGATTAACTCGGGT+CGG + chr5.1:67588561-67588580 None:intergenic 55.0%
!! AAGCAGGTGACGGGTCATCA+TGG + chr5.1:67589101-67589120 None:intergenic 55.0%
!! GAAACGGGTTGGCCTTCGAA+AGG - chr5.1:67588829-67588848 MS.gene81613:CDS 55.0%
!! GGTTGGCCTTCGAAAGGTGA+TGG - chr5.1:67588835-67588854 MS.gene81613:CDS 55.0%
!! TCACCTGCTTCACCGGTTTC+CGG - chr5.1:67589111-67589130 MS.gene81613:CDS 55.0%
AAACCCGGGTCAGGTGGATG+CGG - chr5.1:67588705-67588724 MS.gene81613:CDS 60.0%
AACACACCACGTGTTCCCGG+TGG + chr5.1:67589175-67589194 None:intergenic 60.0%
GGTCAGGTGGATGCGGGTAA+CGG - chr5.1:67588712-67588731 MS.gene81613:CDS 60.0%
GTCAGGTGGATGCGGGTAAC+GGG - chr5.1:67588713-67588732 MS.gene81613:CDS 60.0%
TCGTGAAAACCCGGGTCAGG+TGG - chr5.1:67588699-67588718 MS.gene81613:CDS 60.0%
TGACCCGTCACCTGCTTCAC+CGG - chr5.1:67589104-67589123 MS.gene81613:CDS 60.0%
TTACCCGCATCCACCTGACC+CGG + chr5.1:67588712-67588731 None:intergenic 60.0%
! AGAGTACCACCGGGAACACG+TGG - chr5.1:67589166-67589185 MS.gene81613:CDS 60.0%
AACCCGGGTCAGGTGGATGC+GGG - chr5.1:67588706-67588725 MS.gene81613:CDS 65.0%
ACCACCACTACCACCGCCAC+CGG + chr5.1:67589133-67589152 None:intergenic 65.0%
CAGAAGCAGGCACGTGCTGG+TGG - chr5.1:67589351-67589370 MS.gene81613:CDS 65.0%
CCACCGGAAACCGGTGAAGC+AGG + chr5.1:67589117-67589136 None:intergenic 65.0%
CTACCACCGCCACCGGAAAC+CGG + chr5.1:67589126-67589145 None:intergenic 65.0%
TACCCGCATCCACCTGACCC+GGG + chr5.1:67588711-67588730 None:intergenic 65.0%
! GTTTCCGGTGGCGGTGGTAG+TGG - chr5.1:67589126-67589145 MS.gene81613:CDS 65.0%
!! CCTGCTTCACCGGTTTCCGG+TGG - chr5.1:67589114-67589133 MS.gene81613:CDS 65.0%
!! GCTTCACCGGTTTCCGGTGG+CGG - chr5.1:67589117-67589136 MS.gene81613:CDS 65.0%
!! GGCGGTGGTAGTGGTGGTGG+TGG - chr5.1:67589135-67589154 MS.gene81613:CDS 70.0%
!! GGTGGCGGTGGTAGTGGTGG+TGG - chr5.1:67589132-67589151 MS.gene81613:CDS 70.0%
!! TCACCGGTTTCCGGTGGCGG+TGG - chr5.1:67589120-67589139 MS.gene81613:CDS 70.0%
!! TCCGGTGGCGGTGGTAGTGG+TGG - chr5.1:67589129-67589148 MS.gene81613:CDS 70.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 67588046 67589482 67588046 ID=MS.gene81613
chr5.1 mRNA 67588046 67589482 67588046 ID=MS.gene81613.t1;Parent=MS.gene81613
chr5.1 exon 67588046 67589482 67588046 ID=MS.gene81613.t1.exon1;Parent=MS.gene81613.t1
chr5.1 CDS 67588046 67589482 67588046 ID=cds.MS.gene81613.t1;Parent=MS.gene81613.t1
Gene Sequence

>MS.gene81613

ATGCATAACTTCAATCTCTTCACCTTCTTCATCTACCTCACCTTCATTGCTCTCACAAATGCTGGCAACATAGGCATAAACTACGGTCGTATAGCAAACAACCTACCCTCAGCAACAAAAGTAGTTCAACTCCTAAAATCACAAGGTATAACCCATGTCAAAATCTACGACACAGACCCATCAGTTCTCCGTGCATTATCGGGTTCCAAAATCAAACTCACTGTCGATCTACCCAACCAACAACTCTTTGCAGCAGCAAAGTCTCAATCTTTTGCACTCTCATGGGTCGAAAGAAACATAGTTGCTTTCCAACCGAACACCATTATAGAAGCCATTGCTGTTGGAAATGAAGTTTTTGTTGATCCAAACAACTCGACGAAATACCTCGTACCCGCCATGAAAAACATTTACAGATCGCTACAAAAACATAATCTTCATAATGATATCAAGGTTTCTTCACCCATTGCTCTTTCTGCTCTTGGTAACTCTTACCCTTCTTCTTCCGGGTCATTCCGACCCGAGTTAATCCAACCCGTTTTTAAACCCATGCTTGATTTTCTTCGTGAAACCGGATCTTATCTCATGGTTAACGTATACCCGTTTTTTGCTTATGAGTCCAACGCTGATGTTATCTCATTGGATTATGCTCTTTTTCGTGAAAACCCGGGTCAGGTGGATGCGGGTAACGGGTTGAGATACTTGAACCTTTTCGACGCTCAAATCGACGCTGTTTTCGCAGCATTATCTCGTTTGAAATACGACGATATAAACGTCGTCGTTTCGGAAACGGGTTGGCCTTCGAAAGGTGATGGTAATGAAGTGGGTGCGAGTGTAGAGAATGCAGCAGCATACAACGCAAATCTCGTCCGTAAGATCTTGACATCAAAAGGGACCCCACTTAGGCCCAAAGCAGAACTCACCGTTTTTTTATTCGCACTTTTTAATGAAAATCAAAAGCCCGGGCCTACTTCAGAAAGAAACTTTGGGCTTTTTTACCCTGATGAGAAGAAAGTTTACAATGTTCCTTTAACCGTGGAGGCTTTGAAAAATTACCATGATGACCCGTCACCTGCTTCACCGGTTTCCGGTGGCGGTGGTAGTGGTGGTGGTGGTGTTTCGAAGAGTACCACCGGGAACACGTGGTGTGTTGCAAATCCTTATGCCGATAAAACTAAGCTACAAGATGCTTTAGATTTTGCTTGTGGTGAGGGTGGTGCTGATTGCCGTCCGATTCAAAACAATGCCACGTGTTTTGATCCTAATACATTGGTTGCACATGCTTCATTTGCGTTCAATAGTTATTATCAGAAGCAGGCACGTGCTGGTGGAAGTTGCTATTTTGGTGGTACGTCGTATGTGGTCACTCAAGAGCCTAGTAAGTATTCTATAATCACCTTTTCTCATTGTTTTTTGTTAGATTCTTGTAATAAGGCGTAG
Protein sequence

>MS.gene81613.t1

MHNFNLFTFFIYLTFIALTNAGNIGINYGRIANNLPSATKVVQLLKSQGITHVKIYDTDPSVLRALSGSKIKLTVDLPNQQLFAAAKSQSFALSWVERNIVAFQPNTIIEAIAVGNEVFVDPNNSTKYLVPAMKNIYRSLQKHNLHNDIKVSSPIALSALGNSYPSSSGSFRPELIQPVFKPMLDFLRETGSYLMVNVYPFFAYESNADVISLDYALFRENPGQVDAGNGLRYLNLFDAQIDAVFAALSRLKYDDINVVVSETGWPSKGDGNEVGASVENAAAYNANLVRKILTSKGTPLRPKAELTVFLFALFNENQKPGPTSERNFGLFYPDEKKVYNVPLTVEALKNYHDDPSPASPVSGGGGSGGGGVSKSTTGNTWCVANPYADKTKLQDALDFACGEGGADCRPIQNNATCFDPNTLVAHASFAFNSYYQKQARAGGSCYFGGTSYVVTQEPSKYSIITFSHCFLLDSCNKA