Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81729.t1 | XP_013468014.1 | 96.9 | 292 | 9 | 0 | 121 | 412 | 120 | 411 | 1.30E-130 | 476.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81729.t1 | Q9SR71 | 50.2 | 309 | 125 | 10 | 125 | 412 | 136 | 436 | 3.0e-48 | 194.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81729.t1 | A0A072VK96 | 96.9 | 292 | 9 | 0 | 121 | 412 | 120 | 411 | 9.1e-131 | 476.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene81729 | MS.gene054117 | PPI |
| MS.gene046808 | MS.gene81729 | PPI |
| MS.gene32361 | MS.gene81729 | PPI |
| MS.gene044460 | MS.gene81729 | PPI |
| MS.gene81729 | MS.gene063505 | PPI |
| MS.gene31802 | MS.gene81729 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81729.t1 | MTR_1g060410 | 97.573 | 412 | 9 | 1 | 1 | 412 | 1 | 411 | 0.0 | 756 |
| MS.gene81729.t1 | MTR_1g060410 | 97.423 | 388 | 9 | 1 | 1 | 388 | 1 | 387 | 0.0 | 697 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81729.t1 | AT3G10070 | 45.753 | 365 | 160 | 13 | 72 | 412 | 86 | 436 | 1.94e-59 | 202 |
Find 171 sgRNAs with CRISPR-Local
Find 426 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGCATTTGGTAAAGTATT+TGG | 0.151141 | 1.3:-43786286 | None:intergenic |
| GGGGTTTAGGGTTTGGAGTT+TGG | 0.194646 | 1.3:-43784686 | None:intergenic |
| AATCAAACCCAGGAGCATTT+TGG | 0.207995 | 1.3:+43786121 | MS.gene81729:CDS |
| TCTTCCTTCAGTCAGCATTT+TGG | 0.214110 | 1.3:+43784942 | MS.gene81729:CDS |
| CTGTGTCGGAGGAGGATTTC+GGG | 0.270145 | 1.3:-43784754 | None:intergenic |
| CCTGAAGTTGCAGACATTCT+TGG | 0.271972 | 1.3:+43789656 | MS.gene81729:CDS |
| TTTGGAGTTTGGATTAGATT+AGG | 0.280307 | 1.3:-43784675 | None:intergenic |
| GATGAAGGTTTCTGATTTCC+TGG | 0.282130 | 1.3:-43786211 | None:intergenic |
| ATTAGATTAGGGTTAGGGTT+AGG | 0.286246 | 1.3:-43784663 | None:intergenic |
| TAGGGTTAGGGTTAGGGATT+GGG | 0.298501 | 1.3:-43784656 | None:intergenic |
| GTGGGTGGAGGGAGAGAGGG+TGG | 0.298715 | 1.3:-43784594 | None:intergenic |
| ATTGGGGAGGAAGTGGAGTT+GGG | 0.303505 | 1.3:-43784707 | None:intergenic |
| TTGGAGTTTGGATTAGATTA+GGG | 0.310066 | 1.3:-43784674 | None:intergenic |
| TTGGCATGGATTGCTGCTGC+TGG | 0.313870 | 1.3:-43786066 | None:intergenic |
| TGCTCCTGGGTTTGATTAGA+AGG | 0.317193 | 1.3:-43786115 | None:intergenic |
| CTTTGCCATCCCCGGCCTAT+AGG | 0.322888 | 1.3:+43785999 | MS.gene81729:CDS |
| GGGGTAGAGGATGTGGGTGG+AGG | 0.326876 | 1.3:-43784606 | None:intergenic |
| TTAGATTAGGGTTAGGGTTA+GGG | 0.327700 | 1.3:-43784662 | None:intergenic |
| GTTTGGATTAGATTAGGGTT+AGG | 0.339089 | 1.3:-43784669 | None:intergenic |
| CCAAGAATGTCTGCAACTTC+AGG | 0.350440 | 1.3:-43789656 | None:intergenic |
| TTGGGGAGGAAGTGGAGTTG+GGG | 0.357945 | 1.3:-43784706 | None:intergenic |
| TGGGGAGGAAGTGGAGTTGG+GGG | 0.360099 | 1.3:-43784705 | None:intergenic |
| GGTGGAGGGAGAGAGGGTGG+TGG | 0.376801 | 1.3:-43784591 | None:intergenic |
| TTTGGATTAGATTAGGGTTA+GGG | 0.389070 | 1.3:-43784668 | None:intergenic |
| GGACGTGATTGGGGAGGAAG+TGG | 0.389119 | 1.3:-43784714 | None:intergenic |
| GATTCTTCTATATCTGCATT+TGG | 0.392916 | 1.3:-43786298 | None:intergenic |
| TCCTTTGCTGCAAGGATTGT+GGG | 0.392978 | 1.3:-43786033 | None:intergenic |
| ATGGGGACGTTAGGATCTTT+CGG | 0.399058 | 1.3:+43785244 | MS.gene81729:CDS |
| AGGGTTAGGGTTAGGGATTG+GGG | 0.401260 | 1.3:-43784655 | None:intergenic |
| AGACGGAGGAGGACGTGATT+GGG | 0.403111 | 1.3:-43784724 | None:intergenic |
| AAATGCAGATATAGAAGAAT+CGG | 0.410292 | 1.3:+43786300 | MS.gene81729:CDS |
| CTTGTTGCCCAAAATGCTCC+TGG | 0.410453 | 1.3:-43786129 | None:intergenic |
| CGAGCGCCAATGCAAGGAAT+GGG | 0.411467 | 1.3:+43785226 | MS.gene81729:CDS |
| GATGGGAGGGGTAGAGGATG+TGG | 0.412410 | 1.3:-43784613 | None:intergenic |
| AAGACGGAGGAGGACGTGAT+TGG | 0.412595 | 1.3:-43784725 | None:intergenic |
| GATTGGGGAGGAAGTGGAGT+TGG | 0.419102 | 1.3:-43784708 | None:intergenic |
| AATCAGCCATGGTTGTCGTC+TGG | 0.420719 | 1.3:+43785959 | MS.gene81729:CDS |
| GGATGTGGGTGGAGGGAGAG+AGG | 0.422196 | 1.3:-43784598 | None:intergenic |
| GGTGGTTCTAGCGGTGGTTC+CGG | 0.422453 | 1.3:-43784532 | None:intergenic |
| CCGAGAGGCGGTATGGCAAT+TGG | 0.423100 | 1.3:+43784879 | MS.gene81729:CDS |
| AAAACGGAGGCGAAGGGCTC+TGG | 0.423424 | 1.3:-43784917 | None:intergenic |
| GATGTGGGTGGAGGGAGAGA+GGG | 0.424179 | 1.3:-43784597 | None:intergenic |
| TAATCAACCTGCTGGTTCTC+AGG | 0.425852 | 1.3:+43785360 | MS.gene81729:CDS |
| TTAGGGTTAGGGTTAGGGAT+TGG | 0.426492 | 1.3:-43784657 | None:intergenic |
| TGCTGAGATGGGAGGGGTAG+AGG | 0.427479 | 1.3:-43784619 | None:intergenic |
| CTAGCGGTGGTTCCGGTGAC+CGG | 0.432438 | 1.3:-43784525 | None:intergenic |
| TGGGTTTATTTGCTGCCTAT+AGG | 0.433074 | 1.3:-43786014 | None:intergenic |
| GGAAATCGATGAAGCGGGAT+TGG | 0.433174 | 1.3:-43784844 | None:intergenic |
| TGGTTGAGATTGTGAGGATT+CGG | 0.437144 | 1.3:-43784556 | None:intergenic |
| AACGTCCCCATTCCTTGCAT+TGG | 0.448881 | 1.3:-43785232 | None:intergenic |
| ACTGTGTCGGAGGAGGATTT+CGG | 0.449412 | 1.3:-43784755 | None:intergenic |
| CTTCAGAGTTTCCAAGGTCA+TGG | 0.449451 | 1.3:+43785863 | MS.gene81729:intron |
| GGGTAGAGGATGTGGGTGGA+GGG | 0.452338 | 1.3:-43784605 | None:intergenic |
| ATCAGCCATGGTTGTCGTCT+GGG | 0.453030 | 1.3:+43785960 | MS.gene81729:CDS |
| GGATGTGATGGTGCTGAGAT+GGG | 0.454736 | 1.3:-43784630 | None:intergenic |
| AGGATGTGATGGTGCTGAGA+TGG | 0.457818 | 1.3:-43784631 | None:intergenic |
| GGTAATCTACTTTGACTCCC+TGG | 0.458944 | 1.3:-43786265 | None:intergenic |
| GAAGAAGAAAACGGAGGCGA+AGG | 0.459947 | 1.3:-43784924 | None:intergenic |
| TGGTTGTCGTCTGGGCCACC+AGG | 0.463267 | 1.3:+43785968 | MS.gene81729:CDS |
| ATCGATGAAGCGGGATTGGA+CGG | 0.463774 | 1.3:-43784840 | None:intergenic |
| CTCACCAGCCACAGGTTACA+AGG | 0.465300 | 1.3:+43786179 | MS.gene81729:CDS |
| TTATTTGCTGCCTATAGGCC+GGG | 0.472088 | 1.3:-43786009 | None:intergenic |
| GATGGCAAAGGAGGCTTCCC+TGG | 0.472347 | 1.3:-43785986 | None:intergenic |
| GCCACAGGTTACAAGGCTAC+AGG | 0.472645 | 1.3:+43786186 | MS.gene81729:CDS |
| ATGCAAGGAATGGGGACGTT+AGG | 0.475609 | 1.3:+43785235 | MS.gene81729:CDS |
| GTGATGGTGCTGAGATGGGA+GGG | 0.476608 | 1.3:-43784626 | None:intergenic |
| CATCCATGAGCTAGTCCATC+AGG | 0.480042 | 1.3:+43786348 | MS.gene81729:CDS |
| GAAGGGCTCTGGTGGTGCGC+GGG | 0.483191 | 1.3:-43784906 | None:intergenic |
| CTGCTGTGAAGCTGTTGGCA+TGG | 0.484108 | 1.3:-43786080 | None:intergenic |
| GGTGGTGGTTGTTGTTGTTG+TGG | 0.488572 | 1.3:-43784576 | None:intergenic |
| CTCCATGGAATCACAACCTC+CGG | 0.488842 | 1.3:+43784506 | None:intergenic |
| CGAAGGGCTCTGGTGGTGCG+CGG | 0.491264 | 1.3:-43784907 | None:intergenic |
| GCGAGCGCCAATGCAAGGAA+TGG | 0.492659 | 1.3:+43785225 | MS.gene81729:CDS |
| TCCCGCTTCATCGATTTCCT+CGG | 0.493510 | 1.3:+43784848 | MS.gene81729:CDS |
| TCACTTGTGGCTGGACAGTC+CGG | 0.495197 | 1.3:+43786232 | MS.gene81729:CDS |
| GGAGGGGTAGAGGATGTGGG+TGG | 0.499832 | 1.3:-43784609 | None:intergenic |
| GTCCTTTGCTGCAAGGATTG+TGG | 0.500949 | 1.3:-43786034 | None:intergenic |
| TTATTATTAGGTTGATCCAT+TGG | 0.501655 | 1.3:+43789622 | MS.gene81729:intron |
| CTATAGGCCGGGGATGGCAA+AGG | 0.501667 | 1.3:-43785998 | None:intergenic |
| TTTATTTGCTGCCTATAGGC+CGG | 0.509570 | 1.3:-43786010 | None:intergenic |
| ATGGGAGGGGTAGAGGATGT+GGG | 0.511152 | 1.3:-43784612 | None:intergenic |
| TGGCATGGATTGCTGCTGCT+GGG | 0.511755 | 1.3:-43786065 | None:intergenic |
| CAGTCCGGTGCAGTTCAACC+AGG | 0.512783 | 1.3:+43786247 | MS.gene81729:CDS |
| GTAGCCTTGTAACCTGTGGC+TGG | 0.515089 | 1.3:-43786183 | None:intergenic |
| AAACCTTCATCACTTGTGGC+TGG | 0.517955 | 1.3:+43786223 | MS.gene81729:CDS |
| TTCTGCGCCGAGAGGCGGTA+TGG | 0.520575 | 1.3:+43784872 | MS.gene81729:CDS |
| ACTCCCTGGTTGAACTGCAC+CGG | 0.521551 | 1.3:-43786251 | None:intergenic |
| GGTCTAAGAGACGATTGAAC+AGG | 0.522290 | 1.3:-43785316 | None:intergenic |
| TTGTTGTGGTTGAGATTGTG+AGG | 0.524671 | 1.3:-43784562 | None:intergenic |
| TGCTGCTGCTGTGAAGCTGT+TGG | 0.526831 | 1.3:-43786085 | None:intergenic |
| GACCGGAGGTTGTGATTCCA+TGG | 0.527555 | 1.3:-43784508 | None:intergenic |
| CCACAGGTTACAAGGCTACA+GGG | 0.530609 | 1.3:+43786187 | MS.gene81729:CDS |
| GGGATTGGGGAAGGATGTGA+TGG | 0.530855 | 1.3:-43784642 | None:intergenic |
| TCGGCTTCTGCGCCGAGAGG+CGG | 0.533708 | 1.3:+43784867 | MS.gene81729:CDS |
| CCTTGTGATGCACTTGGAGA+TGG | 0.535900 | 1.3:-43785923 | None:intergenic |
| GTCTCATAAGTCCATGACCT+TGG | 0.538080 | 1.3:-43785874 | None:intergenic |
| TGATGGTGCTGAGATGGGAG+GGG | 0.539463 | 1.3:-43784625 | None:intergenic |
| GAATCACAACCTCCGGTCAC+CGG | 0.541083 | 1.3:+43784513 | MS.gene81729:CDS |
| TTGTTGCCCAAAATGCTCCT+GGG | 0.542581 | 1.3:-43786128 | None:intergenic |
| CTTGTAACCTGTGGCTGGTG+AGG | 0.542711 | 1.3:-43786178 | None:intergenic |
| GCTCAAAATAATCAACCTGC+TGG | 0.542993 | 1.3:+43785352 | MS.gene81729:CDS |
| GCCTCTCGGCGCAGAAGCCG+AGG | 0.543308 | 1.3:-43784865 | None:intergenic |
| TGTGATGGTGCTGAGATGGG+AGG | 0.543674 | 1.3:-43784627 | None:intergenic |
| GTTACAAGGCTACAGGGGCC+AGG | 0.545927 | 1.3:+43786193 | MS.gene81729:CDS |
| GAAGCCTCCTTTGCCATCCC+CGG | 0.545983 | 1.3:+43785991 | MS.gene81729:CDS |
| TCAGGATCTAACTTCTCCAA+TGG | 0.546696 | 1.3:-43789638 | None:intergenic |
| TGTCCAGCCACAAGTGATGA+AGG | 0.547763 | 1.3:-43786226 | None:intergenic |
| AGATTGTGAGGATTCGGTGG+TGG | 0.549773 | 1.3:-43784550 | None:intergenic |
| ACGGAGGCGAAGGGCTCTGG+TGG | 0.553639 | 1.3:-43784914 | None:intergenic |
| AATGCAGATATAGAAGAATC+GGG | 0.554601 | 1.3:+43786301 | MS.gene81729:CDS |
| TTCGGTGGTGGTTCTAGCGG+TGG | 0.555458 | 1.3:-43784538 | None:intergenic |
| TAATGTGACTGTGTCGGAGG+AGG | 0.558404 | 1.3:-43784762 | None:intergenic |
| GACGGAGGAGGACGTGATTG+GGG | 0.559188 | 1.3:-43784723 | None:intergenic |
| AACAAATTCTAACACCTCCC+AGG | 0.563089 | 1.3:+43784989 | MS.gene81729:CDS |
| GCCGAGGAAATCGATGAAGC+GGG | 0.563478 | 1.3:-43784849 | None:intergenic |
| TGTGAAGGATTAGCGGAAGG+TGG | 0.568770 | 1.3:-43784804 | None:intergenic |
| CCAATTGCCATACCGCCTCT+CGG | 0.569027 | 1.3:-43784879 | None:intergenic |
| TCGAATTCACAAATGCGGCC+AGG | 0.570998 | 1.3:+43785268 | MS.gene81729:CDS |
| GTGAAGGATTAGCGGAAGGT+GGG | 0.571237 | 1.3:-43784803 | None:intergenic |
| TTAGGGTTAGGGATTGGGGA+AGG | 0.571406 | 1.3:-43784651 | None:intergenic |
| GGCAAAGGAGGCTTCCCTGG+TGG | 0.574962 | 1.3:-43785983 | None:intergenic |
| ACCCACAATCCTTGCAGCAA+AGG | 0.577602 | 1.3:+43786032 | MS.gene81729:CDS |
| TGCATACCTTGTGATGCACT+TGG | 0.578409 | 1.3:-43785929 | None:intergenic |
| AATATGCGTCCTTTGCTGCA+AGG | 0.578789 | 1.3:-43786041 | None:intergenic |
| TCAGAAACCTTCATCACTTG+TGG | 0.580927 | 1.3:+43786219 | MS.gene81729:CDS |
| CCCTGTAGCCTTGTAACCTG+TGG | 0.581438 | 1.3:-43786187 | None:intergenic |
| AGCCGAGGAAATCGATGAAG+CGG | 0.582159 | 1.3:-43784850 | None:intergenic |
| TGAAGCTTGTGAAGGATTAG+CGG | 0.583084 | 1.3:-43784811 | None:intergenic |
| TGCTGCCTATAGGCCGGGGA+TGG | 0.584172 | 1.3:-43786004 | None:intergenic |
| TGTGGCTGGTGAGGCACATG+TGG | 0.587313 | 1.3:-43786169 | None:intergenic |
| TGCAGTCAATTAATCAGCCA+TGG | 0.588046 | 1.3:+43785948 | MS.gene81729:CDS |
| ACATGTGCCTCACCAGCCAC+AGG | 0.588693 | 1.3:+43786171 | MS.gene81729:CDS |
| TATTTGCTGCCTATAGGCCG+GGG | 0.589168 | 1.3:-43786008 | None:intergenic |
| TAGGCCGGGGATGGCAAAGG+AGG | 0.590746 | 1.3:-43785995 | None:intergenic |
| TAGGTGCGAGCGCCAATGCA+AGG | 0.591000 | 1.3:+43785220 | MS.gene81729:intron |
| CGGGTGAATGAAGACGGAGG+AGG | 0.595877 | 1.3:-43784735 | None:intergenic |
| GCACCTGATGGACTAGCTCA+TGG | 0.598121 | 1.3:-43786351 | None:intergenic |
| TCCACCAAAATGCTGACTGA+AGG | 0.598354 | 1.3:-43784946 | None:intergenic |
| GGATTTCGGGTGAATGAAGA+CGG | 0.599117 | 1.3:-43784741 | None:intergenic |
| TGATGTGGAGGCATTCCACC+TGG | 0.603017 | 1.3:-43785286 | None:intergenic |
| AAGAAGAAAACGGAGGCGAA+GGG | 0.603959 | 1.3:-43784923 | None:intergenic |
| GAAGGTGGTCCCACAGATGA+CGG | 0.613187 | 1.3:-43785896 | None:intergenic |
| ACTTATGAGACCGTCATCTG+TGG | 0.618709 | 1.3:+43785886 | MS.gene81729:CDS |
| TCCTCGGCTTCTGCGCCGAG+AGG | 0.618903 | 1.3:+43784864 | MS.gene81729:CDS |
| GAGCGCCAATGCAAGGAATG+GGG | 0.622668 | 1.3:+43785227 | MS.gene81729:CDS |
| CTTATGAGACCGTCATCTGT+GGG | 0.627216 | 1.3:+43785887 | MS.gene81729:CDS |
| GCGGTGGTTCCGGTGACCGG+AGG | 0.629204 | 1.3:-43784522 | None:intergenic |
| TTGAGATTGTGAGGATTCGG+TGG | 0.629602 | 1.3:-43784553 | None:intergenic |
| TCGGTTCGAATTCACAAATG+CGG | 0.629798 | 1.3:+43785263 | MS.gene81729:CDS |
| ACACTAACCTGAGAACCAGC+AGG | 0.631581 | 1.3:-43785367 | None:intergenic |
| GCACTTGGAGATGGAGCTGA+AGG | 0.633658 | 1.3:-43785914 | None:intergenic |
| CCATCTCCAAGTGCATCACA+AGG | 0.637997 | 1.3:+43785923 | MS.gene81729:CDS |
| TGAACAGGTCTCTGTTGATG+TGG | 0.638203 | 1.3:-43785301 | None:intergenic |
| TTTGCCTTCTAATCAAACCC+AGG | 0.639660 | 1.3:+43786111 | MS.gene81729:CDS |
| GGAGGAGGACGTGATTGGGG+AGG | 0.642712 | 1.3:-43784720 | None:intergenic |
| GGATTCGGTGGTGGTTCTAG+CGG | 0.642781 | 1.3:-43784541 | None:intergenic |
| GGTTGTCGTCTGGGCCACCA+GGG | 0.645337 | 1.3:+43785969 | MS.gene81729:CDS |
| AATTCACAAATGCGGCCAGG+TGG | 0.651881 | 1.3:+43785271 | MS.gene81729:CDS |
| GCTTGTGAAGGATTAGCGGA+AGG | 0.652795 | 1.3:-43784807 | None:intergenic |
| TGACTGAAGGAAGAAGAAAA+CGG | 0.652831 | 1.3:-43784933 | None:intergenic |
| GGAAAAGATGAAGCTTGTGA+AGG | 0.655237 | 1.3:-43784819 | None:intergenic |
| ACAGGTCTCTGTTGATGTGG+AGG | 0.659402 | 1.3:-43785298 | None:intergenic |
| CTTGGAGATGGAGCTGAAGG+TGG | 0.660987 | 1.3:-43785911 | None:intergenic |
| GGTGGCCCAGACGACAACCA+TGG | 0.671786 | 1.3:-43785965 | None:intergenic |
| CACAGGTTACAAGGCTACAG+GGG | 0.678188 | 1.3:+43786188 | MS.gene81729:CDS |
| AGTCCGGTGCAGTTCAACCA+GGG | 0.688908 | 1.3:+43786248 | MS.gene81729:CDS |
| GAGTAATGTGACTGTGTCGG+AGG | 0.700738 | 1.3:-43784765 | None:intergenic |
| TGAGAGTAATGTGACTGTGT+CGG | 0.707867 | 1.3:-43784768 | None:intergenic |
| CTGAAGGAAGAAGAAAACGG+AGG | 0.725502 | 1.3:-43784930 | None:intergenic |
| TTTCGGGTGAATGAAGACGG+AGG | 0.733175 | 1.3:-43784738 | None:intergenic |
| AATGCAAAACTATACCTGGG+AGG | 0.767072 | 1.3:-43785003 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAAAAACAG+TGG | + | chr1.3:43789019-43789038 | MS.gene81729:intron | 10.0% |
| !! | AAAATTATCATTCAATTAAT+TGG | - | chr1.3:43786769-43786788 | None:intergenic | 10.0% |
| !! | GAAATAAAGAAATTAATATA+AGG | + | chr1.3:43787932-43787951 | MS.gene81729:intron | 10.0% |
| !! | TTAATCTATAAATAAATCTA+TGG | + | chr1.3:43787052-43787071 | MS.gene81729:intron | 10.0% |
| !!! | ACTTAAATACAAATATTTTT+TGG | + | chr1.3:43787430-43787449 | MS.gene81729:intron | 10.0% |
| !!! | AGTTATGATTTTAAAATTTT+GGG | + | chr1.3:43788666-43788685 | MS.gene81729:intron | 10.0% |
| !!! | ATTAAATTAAGTTTTTTTGT+TGG | + | chr1.3:43787629-43787648 | MS.gene81729:intron | 10.0% |
| !!! | ATTTTTAGTTGTTTTTAAAT+TGG | - | chr1.3:43787611-43787630 | None:intergenic | 10.0% |
| !!! | TAGTTATGATTTTAAAATTT+TGG | + | chr1.3:43788665-43788684 | MS.gene81729:intron | 10.0% |
| !!! | TTTTTTTTTTTTTGTTATCT+TGG | - | chr1.3:43789010-43789029 | None:intergenic | 10.0% |
| !! | AATAGTGAAATGTAATAAAA+TGG | - | chr1.3:43786825-43786844 | None:intergenic | 15.0% |
| !! | ACTAAATGATAAAATGAAAA+CGG | - | chr1.3:43789150-43789169 | None:intergenic | 15.0% |
| !! | ATAGTGAAATGTAATAAAAT+GGG | - | chr1.3:43786824-43786843 | None:intergenic | 15.0% |
| !! | TAAAAATATAATGTAAACAC+AGG | - | chr1.3:43789605-43789624 | None:intergenic | 15.0% |
| !! | TAAGATAACAATTTACAATT+GGG | + | chr1.3:43787671-43787690 | MS.gene81729:intron | 15.0% |
| !! | TAATTTGAATTTGAATCTAT+TGG | + | chr1.3:43787355-43787374 | MS.gene81729:intron | 15.0% |
| !! | TTAAGATAACAATTTACAAT+TGG | + | chr1.3:43787670-43787689 | MS.gene81729:intron | 15.0% |
| !! | TTAATTGGATATTTATACAA+TGG | - | chr1.3:43786754-43786773 | None:intergenic | 15.0% |
| !!! | ATATTTTTTGGTAGTTTTAA+TGG | + | chr1.3:43787442-43787461 | MS.gene81729:intron | 15.0% |
| !!! | ATCACATTTCTATTTTTTTA+TGG | + | chr1.3:43787218-43787237 | MS.gene81729:intron | 15.0% |
| !!! | ATTTTTAGGAGAAAAAAAAA+AGG | - | chr1.3:43788283-43788302 | None:intergenic | 15.0% |
| !!! | TTTTTAGGAGAAAAAAAAAA+GGG | - | chr1.3:43788282-43788301 | None:intergenic | 15.0% |
| !! | AAATGAAACGATATCAAAAT+AGG | + | chr1.3:43786584-43786603 | MS.gene81729:intron | 20.0% |
| !! | AAGATAAAAATATACACCAA+GGG | + | chr1.3:43788954-43788973 | MS.gene81729:intron | 20.0% |
| !! | ACTGAAAATGAAGAAATAAA+AGG | + | chr1.3:43787910-43787929 | MS.gene81729:intron | 20.0% |
| !! | ATGATAAGCATTTATGTTAT+AGG | + | chr1.3:43785697-43785716 | MS.gene81729:intron | 20.0% |
| !! | ATTAGAAAATTCTGATAGTT+TGG | - | chr1.3:43789229-43789248 | None:intergenic | 20.0% |
| !! | ATTATACTTTCAGTATATTG+TGG | - | chr1.3:43787254-43787273 | None:intergenic | 20.0% |
| !! | CTATAAATAAATCTATGGAA+GGG | + | chr1.3:43787057-43787076 | MS.gene81729:intron | 20.0% |
| !! | GAAGAAAATATAAACAAACT+AGG | - | chr1.3:43785847-43785866 | None:intergenic | 20.0% |
| !! | TAAATTCTTACATGTCTAAT+GGG | - | chr1.3:43786916-43786935 | None:intergenic | 20.0% |
| !! | TAAGATAAAAATATACACCA+AGG | + | chr1.3:43788953-43788972 | MS.gene81729:intron | 20.0% |
| !! | TCAATATGAAAAATAGAAAG+CGG | + | chr1.3:43787978-43787997 | MS.gene81729:intron | 20.0% |
| !! | TCTAGCTAAAATTAACTAAA+TGG | + | chr1.3:43788474-43788493 | MS.gene81729:intron | 20.0% |
| !! | TCTATAAATAAATCTATGGA+AGG | + | chr1.3:43787056-43787075 | MS.gene81729:intron | 20.0% |
| !! | TGGTAAAATACCTATTTATT+GGG | + | chr1.3:43788205-43788224 | MS.gene81729:intron | 20.0% |
| !! | TTAATCTATTAAACTTCAGA+AGG | + | chr1.3:43788716-43788735 | MS.gene81729:intron | 20.0% |
| !! | TTTGTTAAATAAAACATAGG+TGG | + | chr1.3:43786434-43786453 | MS.gene81729:intron | 20.0% |
| !!! | ATTTTAAACAATCCAAACAA+TGG | - | chr1.3:43786611-43786630 | None:intergenic | 20.0% |
| !!! | CAGTGATTTAATTTAAAACA+TGG | + | chr1.3:43786541-43786560 | MS.gene81729:intron | 20.0% |
| !!! | CGTTTTGTTAAATAAAACAT+AGG | + | chr1.3:43786431-43786450 | MS.gene81729:intron | 20.0% |
| !!! | TAAAATAGGTTGAAATGAAA+TGG | + | chr1.3:43786625-43786644 | MS.gene81729:intron | 20.0% |
| !!! | TACTTATTTCTGCTATTTTA+GGG | - | chr1.3:43787583-43787602 | None:intergenic | 20.0% |
| !!! | TATATTTTTATCTTAACCCA+GGG | - | chr1.3:43788948-43788967 | None:intergenic | 20.0% |
| !!! | TCTACTTTCTTTTAATATCA+TGG | + | chr1.3:43789445-43789464 | MS.gene81729:intron | 20.0% |
| !!! | TGATTTAATTTAAAACATGG+AGG | + | chr1.3:43786544-43786563 | MS.gene81729:intron | 20.0% |
| !!! | TTACTTATTTCTGCTATTTT+AGG | - | chr1.3:43787584-43787603 | None:intergenic | 20.0% |
| !!! | TTGTTTGGATTGTTTAAAAT+AGG | + | chr1.3:43786611-43786630 | MS.gene81729:intron | 20.0% |
| !!! | TTTTAGGAGAAAAAAAAAAG+GGG | - | chr1.3:43788281-43788300 | None:intergenic | 20.0% |
| !!! | TTTTAGGGTGAATATATATT+AGG | - | chr1.3:43787568-43787587 | None:intergenic | 20.0% |
| !!! | TTTTCATAATGAAGTGTTTT+AGG | - | chr1.3:43789409-43789428 | None:intergenic | 20.0% |
| ! | AAATGCAGATATAGAAGAAT+CGG | + | chr1.3:43786300-43786319 | MS.gene81729:CDS | 25.0% |
| ! | AAATTCTTACATGTCTAATG+GGG | - | chr1.3:43786915-43786934 | None:intergenic | 25.0% |
| ! | ACATGTAAGAATTTAGATGA+CGG | + | chr1.3:43786921-43786940 | MS.gene81729:intron | 25.0% |
| ! | ATACTCATTCAAATTGTGTT+TGG | + | chr1.3:43789181-43789200 | MS.gene81729:intron | 25.0% |
| ! | ATAGATTAATGCAAATTACG+AGG | - | chr1.3:43787041-43787060 | None:intergenic | 25.0% |
| ! | ATAGTTTGGATTGATATACT+CGG | - | chr1.3:43789215-43789234 | None:intergenic | 25.0% |
| ! | CTAAATTCTTACATGTCTAA+TGG | - | chr1.3:43786917-43786936 | None:intergenic | 25.0% |
| ! | GCTAAAATTAACTAAATGGT+AGG | + | chr1.3:43788478-43788497 | MS.gene81729:intron | 25.0% |
| ! | GGTAAAATACCTATTTATTG+GGG | + | chr1.3:43788206-43788225 | MS.gene81729:intron | 25.0% |
| ! | GGTTATAGCATAATAACATT+AGG | - | chr1.3:43787293-43787312 | None:intergenic | 25.0% |
| ! | GTGGTAAAATACCTATTTAT+TGG | + | chr1.3:43788204-43788223 | MS.gene81729:intron | 25.0% |
| ! | TACTAGAATTAAACCCATTT+CGG | + | chr1.3:43788231-43788250 | MS.gene81729:intron | 25.0% |
| ! | TGAAATGTAATAAAATGGGA+TGG | - | chr1.3:43786820-43786839 | None:intergenic | 25.0% |
| ! | TGTGTAATTTATGTGTGTAA+GGG | + | chr1.3:43785484-43785503 | MS.gene81729:intron | 25.0% |
| ! | TTAAATTGTTCATCCAAACA+GGG | + | chr1.3:43785723-43785742 | MS.gene81729:intron | 25.0% |
| !! | AAGGAAAACACAATTTTGTA+AGG | + | chr1.3:43788735-43788754 | MS.gene81729:intron | 25.0% |
| !! | ATTTTTGTCAAAAACACGAA+TGG | + | chr1.3:43787127-43787146 | MS.gene81729:intron | 25.0% |
| !! | CAGTTCTATTTTCATGAAAT+AGG | + | chr1.3:43789568-43789587 | MS.gene81729:intron | 25.0% |
| !! | CTGAATTTTACTTATGAGTA+TGG | + | chr1.3:43785428-43785447 | MS.gene81729:intron | 25.0% |
| !! | CTTTCTTTTAATATCATGGA+CGG | + | chr1.3:43789449-43789468 | MS.gene81729:intron | 25.0% |
| !! | TTTAAAACATGGAGGTTAAA+TGG | + | chr1.3:43786552-43786571 | MS.gene81729:intron | 25.0% |
| !! | TTTCTTTTAATATCATGGAC+GGG | + | chr1.3:43789450-43789469 | MS.gene81729:intron | 25.0% |
| !! | TTTTTGTCAAAAACACGAAT+GGG | + | chr1.3:43787128-43787147 | MS.gene81729:intron | 25.0% |
| !!! | AGTTGTTGTTTGTAATGTTT+AGG | + | chr1.3:43785201-43785220 | MS.gene81729:intron | 25.0% |
| !!! | ATGTCATTGATTTATTTGCA+TGG | + | chr1.3:43787171-43787190 | MS.gene81729:intron | 25.0% |
| !!! | GTATATTTTTATCTTAACCC+AGG | - | chr1.3:43788949-43788968 | None:intergenic | 25.0% |
| !!! | TGTCATTGATTTATTTGCAT+GGG | + | chr1.3:43787172-43787191 | MS.gene81729:intron | 25.0% |
| !!! | TTATTATTAGGTTGATCCAT+TGG | + | chr1.3:43789622-43789641 | MS.gene81729:intron | 25.0% |
| !!! | TTTTATTTAACAAAACGTGC+TGG | - | chr1.3:43786428-43786447 | None:intergenic | 25.0% |
| AAGTGTGATCAAAGAATAAG+AGG | - | chr1.3:43787414-43787433 | None:intergenic | 30.0% | |
| AATGCAGATATAGAAGAATC+GGG | + | chr1.3:43786301-43786320 | MS.gene81729:CDS | 30.0% | |
| AATTCTTACATGTCTAATGG+GGG | - | chr1.3:43786914-43786933 | None:intergenic | 30.0% | |
| ACACATATATCCAAAATGTG+TGG | - | chr1.3:43785090-43785109 | None:intergenic | 30.0% | |
| ACTAAACCACTTAATTGGAA+GGG | - | chr1.3:43786705-43786724 | None:intergenic | 30.0% | |
| ATCAAAATAGGTCCATTGTT+TGG | + | chr1.3:43786596-43786615 | MS.gene81729:intron | 30.0% | |
| ATTTAATTAGTATGCACCGT+CGG | + | chr1.3:43785035-43785054 | MS.gene81729:intron | 30.0% | |
| CTTAAATTGTTCATCCAAAC+AGG | + | chr1.3:43785722-43785741 | MS.gene81729:intron | 30.0% | |
| GATAACAATTTACAATTGGG+TGG | + | chr1.3:43787674-43787693 | MS.gene81729:intron | 30.0% | |
| GATTCTTCTATATCTGCATT+TGG | - | chr1.3:43786301-43786320 | None:intergenic | 30.0% | |
| GTAAAATAATTGTACACCGA+CGG | - | chr1.3:43785054-43785073 | None:intergenic | 30.0% | |
| GTGTGTAATTTATGTGTGTA+AGG | + | chr1.3:43785483-43785502 | MS.gene81729:intron | 30.0% | |
| TAACTAAATGGTAGGATTAC+TGG | + | chr1.3:43788486-43788505 | MS.gene81729:intron | 30.0% | |
| TATAACCTTGTACATGCTTT+GGG | + | chr1.3:43787306-43787325 | MS.gene81729:intron | 30.0% | |
| TCAACACTAAACCACTTAAT+TGG | - | chr1.3:43786710-43786729 | None:intergenic | 30.0% | |
| TCAACTGTTATGTGATTAAG+AGG | + | chr1.3:43785779-43785798 | MS.gene81729:intron | 30.0% | |
| TCTAGTAAACCCCAATAAAT+AGG | - | chr1.3:43788218-43788237 | None:intergenic | 30.0% | |
| TGGATATTTATACAATGGAG+TGG | - | chr1.3:43786749-43786768 | None:intergenic | 30.0% | |
| TTGGAGTTTAAGGACTAATT+AGG | - | chr1.3:43788591-43788610 | None:intergenic | 30.0% | |
| TTTGTCATAGATGGTGTATT+GGG | + | chr1.3:43787000-43787019 | MS.gene81729:intron | 30.0% | |
| ! | CGATATTGCAGAAAATTTTC+TGG | + | chr1.3:43789679-43789698 | MS.gene81729:CDS | 30.0% |
| ! | TATTTTCTTCAGAGTTTCCA+AGG | + | chr1.3:43785857-43785876 | MS.gene81729:intron | 30.0% |
| ! | TCTGCATTTGGTAAAGTATT+TGG | - | chr1.3:43786289-43786308 | None:intergenic | 30.0% |
| ! | TGGTGATTTAAAGTTCATGA+AGG | + | chr1.3:43787098-43787117 | MS.gene81729:intron | 30.0% |
| ! | TTGGAGTTTGGATTAGATTA+GGG | - | chr1.3:43784677-43784696 | None:intergenic | 30.0% |
| ! | TTTGGAGTTTGGATTAGATT+AGG | - | chr1.3:43784678-43784697 | None:intergenic | 30.0% |
| ! | TTTGGATTAGATTAGGGTTA+GGG | - | chr1.3:43784671-43784690 | None:intergenic | 30.0% |
| !! | GTATAGTTTTGCATTGTGAT+TGG | + | chr1.3:43785011-43785030 | MS.gene81729:intron | 30.0% |
| !! | GTTGTTTTCATAAGCTATCT+TGG | - | chr1.3:43785599-43785618 | None:intergenic | 30.0% |
| !!! | AGATTTAGCTTTTTTTGCTC+TGG | + | chr1.3:43786975-43786994 | MS.gene81729:intron | 30.0% |
| !!! | ATATGTTTATGGCGGATTTT+TGG | - | chr1.3:43787494-43787513 | None:intergenic | 30.0% |
| !!! | GATTTAGCTTTTTTTGCTCT+GGG | + | chr1.3:43786976-43786995 | MS.gene81729:intron | 30.0% |
| AAACTCCAACAAGTTCATGT+GGG | + | chr1.3:43788602-43788621 | MS.gene81729:intron | 35.0% | |
| AAAGACGCGAATAAAGAAGA+GGG | + | chr1.3:43788179-43788198 | MS.gene81729:intron | 35.0% | |
| AAGCTATCTTGGAGAGTTTA+TGG | - | chr1.3:43785588-43785607 | None:intergenic | 35.0% | |
| ATTAGATTAGGGTTAGGGTT+AGG | - | chr1.3:43784666-43784685 | None:intergenic | 35.0% | |
| CACAATGCAAAACTATACCT+GGG | - | chr1.3:43785009-43785028 | None:intergenic | 35.0% | |
| CACTAAACCACTTAATTGGA+AGG | - | chr1.3:43786706-43786725 | None:intergenic | 35.0% | |
| CATTCGCTATATGTTTATGG+CGG | - | chr1.3:43787502-43787521 | None:intergenic | 35.0% | |
| CTATAACCTTGTACATGCTT+TGG | + | chr1.3:43787305-43787324 | MS.gene81729:intron | 35.0% | |
| CTCATTCAAATTGTGTTTGG+AGG | + | chr1.3:43789184-43789203 | MS.gene81729:intron | 35.0% | |
| CTGTCAACGTAGATAAAACT+AGG | - | chr1.3:43786524-43786543 | None:intergenic | 35.0% | |
| CTTTGTCATAGATGGTGTAT+TGG | + | chr1.3:43786999-43787018 | MS.gene81729:intron | 35.0% | |
| TAAAACTAGGAAGTTCCAAC+AGG | - | chr1.3:43786511-43786530 | None:intergenic | 35.0% | |
| TAAACTCCAACAAGTTCATG+TGG | + | chr1.3:43788601-43788620 | MS.gene81729:intron | 35.0% | |
| TAAAGACGCGAATAAAGAAG+AGG | + | chr1.3:43788178-43788197 | MS.gene81729:intron | 35.0% | |
| TATGAGGTTATTCACTTCGT+GGG | + | chr1.3:43785523-43785542 | MS.gene81729:intron | 35.0% | |
| TCACAATGCAAAACTATACC+TGG | - | chr1.3:43785010-43785029 | None:intergenic | 35.0% | |
| TGACTGAAGGAAGAAGAAAA+CGG | - | chr1.3:43784936-43784955 | None:intergenic | 35.0% | |
| TGGGATGGAATAGAACAAAA+TGG | - | chr1.3:43786805-43786824 | None:intergenic | 35.0% | |
| TTAGATTAGGGTTAGGGTTA+GGG | - | chr1.3:43784665-43784684 | None:intergenic | 35.0% | |
| TTATGAGGTTATTCACTTCG+TGG | + | chr1.3:43785522-43785541 | MS.gene81729:intron | 35.0% | |
| TTCAGCAATGCATTTGAATG+AGG | - | chr1.3:43789268-43789287 | None:intergenic | 35.0% | |
| ! | AGGTGGAATTCTCTAGATTT+TGG | + | chr1.3:43786451-43786470 | MS.gene81729:intron | 35.0% |
| ! | ATGGATTGACAAAGAGTCTA+TGG | + | chr1.3:43787461-43787480 | MS.gene81729:intron | 35.0% |
| ! | GTTCTCAGGTTAGTGTATTT+TGG | + | chr1.3:43785374-43785393 | MS.gene81729:intron | 35.0% |
| ! | GTTTGGATTAGATTAGGGTT+AGG | - | chr1.3:43784672-43784691 | None:intergenic | 35.0% |
| ! | TATGGTGTGTTTTTCGTTTG+CGG | + | chr1.3:43785446-43785465 | MS.gene81729:intron | 35.0% |
| ! | TCTGTTAGGATTGACTTATG+AGG | + | chr1.3:43785507-43785526 | MS.gene81729:intron | 35.0% |
| !! | ACTGAAGTAATTCTAGAGCA+AGG | - | chr1.3:43789347-43789366 | None:intergenic | 35.0% |
| !! | CATGAACTTGTTGGAGTTTA+AGG | - | chr1.3:43788601-43788620 | None:intergenic | 35.0% |
| !!! | GGTTGATTATTTTGAGCAGA+AGG | - | chr1.3:43785349-43785368 | None:intergenic | 35.0% |
| !!! | TGATTATTTTGAGCAGAAGG+CGG | - | chr1.3:43785346-43785365 | None:intergenic | 35.0% |
| AACAAATTCTAACACCTCCC+AGG | + | chr1.3:43784989-43785008 | MS.gene81729:CDS | 40.0% | |
| AATCATCGCACAGAAACAGT+GGG | - | chr1.3:43789386-43789405 | None:intergenic | 40.0% | |
| AATGCAAAACTATACCTGGG+AGG | - | chr1.3:43785006-43785025 | None:intergenic | 40.0% | |
| ACAACTTCATGAATGGACCT+TGG | - | chr1.3:43786879-43786898 | None:intergenic | 40.0% | |
| ACATATAGCGAATGGCGTAA+CGG | + | chr1.3:43787508-43787527 | MS.gene81729:intron | 40.0% | |
| ACTAAAGTTCGAATCCTGTC+TGG | + | chr1.3:43788869-43788888 | MS.gene81729:intron | 40.0% | |
| AGGCATCACAACTTCATGAA+TGG | - | chr1.3:43786886-43786905 | None:intergenic | 40.0% | |
| ATGGTGTATTGGGACCATTT+AGG | + | chr1.3:43787010-43787029 | MS.gene81729:intron | 40.0% | |
| ATTCAGTTTCAGTCCCTGTT+TGG | - | chr1.3:43785739-43785758 | None:intergenic | 40.0% | |
| CAACTTCATGAATGGACCTT+GGG | - | chr1.3:43786878-43786897 | None:intergenic | 40.0% | |
| CACAGAAAAGAGAGAACAGA+GGG | + | chr1.3:43788028-43788047 | MS.gene81729:intron | 40.0% | |
| CAGCCAAACTCCGATTATTA+GGG | + | chr1.3:43788922-43788941 | MS.gene81729:intron | 40.0% | |
| CGCCATAAACATATAGCGAA+TGG | + | chr1.3:43787500-43787519 | MS.gene81729:intron | 40.0% | |
| CGCCATTCGCTATATGTTTA+TGG | - | chr1.3:43787505-43787524 | None:intergenic | 40.0% | |
| GATGAAGGTTTCTGATTTCC+TGG | - | chr1.3:43786214-43786233 | None:intergenic | 40.0% | |
| GATTGACAAAGAGTCTATGG+CGG | + | chr1.3:43787464-43787483 | MS.gene81729:intron | 40.0% | |
| GCTCAAAATAATCAACCTGC+TGG | + | chr1.3:43785352-43785371 | MS.gene81729:CDS | 40.0% | |
| GGAAAAGATGAAGCTTGTGA+AGG | - | chr1.3:43784822-43784841 | None:intergenic | 40.0% | |
| GGGGACAAAATTGATGTTGA+AGG | + | chr1.3:43789068-43789087 | MS.gene81729:intron | 40.0% | |
| TAATGAGCTCCAGTTAAGGA+TGG | + | chr1.3:43788833-43788852 | MS.gene81729:intron | 40.0% | |
| TATCCGAACACAGTTTAGAC+TGG | + | chr1.3:43786852-43786871 | MS.gene81729:intron | 40.0% | |
| TATGTGTGTAAGGGTCTGTT+AGG | + | chr1.3:43785493-43785512 | MS.gene81729:intron | 40.0% | |
| TCACAGAAAAGAGAGAACAG+AGG | + | chr1.3:43788027-43788046 | MS.gene81729:intron | 40.0% | |
| TCAGAAACCTTCATCACTTG+TGG | + | chr1.3:43786219-43786238 | MS.gene81729:CDS | 40.0% | |
| TCAGCCAAACTCCGATTATT+AGG | + | chr1.3:43788921-43788940 | MS.gene81729:intron | 40.0% | |
| TCAGGATCTAACTTCTCCAA+TGG | - | chr1.3:43789641-43789660 | None:intergenic | 40.0% | |
| TCCTGCATAGTAGCTAGAAA+AGG | - | chr1.3:43788539-43788558 | None:intergenic | 40.0% | |
| TGAAGCTTGTGAAGGATTAG+CGG | - | chr1.3:43784814-43784833 | None:intergenic | 40.0% | |
| TGAGAGTAATGTGACTGTGT+CGG | - | chr1.3:43784771-43784790 | None:intergenic | 40.0% | |
| TGCAGTCAATTAATCAGCCA+TGG | + | chr1.3:43785948-43785967 | MS.gene81729:CDS | 40.0% | |
| TGCTTAATGAGCTCCAGTTA+AGG | + | chr1.3:43788829-43788848 | MS.gene81729:intron | 40.0% | |
| TGGAGTGGAGAAAAAAAAGC+TGG | - | chr1.3:43786734-43786753 | None:intergenic | 40.0% | |
| TGGTTGAGATTGTGAGGATT+CGG | - | chr1.3:43784559-43784578 | None:intergenic | 40.0% | |
| TGTATTGGGACCATTTAGGT+TGG | + | chr1.3:43787014-43787033 | MS.gene81729:intron | 40.0% | |
| TTCAACATGACGCCATAGAA+TGG | - | chr1.3:43788386-43788405 | None:intergenic | 40.0% | |
| TTGATCCCACATGAACTTGT+TGG | - | chr1.3:43788610-43788629 | None:intergenic | 40.0% | |
| TTGTGAACAGTGTTGTCGAA+TGG | - | chr1.3:43788426-43788445 | None:intergenic | 40.0% | |
| TTGTTGTGGTTGAGATTGTG+AGG | - | chr1.3:43784565-43784584 | None:intergenic | 40.0% | |
| TTTGCCTTCTAATCAAACCC+AGG | + | chr1.3:43786111-43786130 | MS.gene81729:CDS | 40.0% | |
| ! | ATCCTGTCTGGAACAATCAT+TGG | + | chr1.3:43788881-43788900 | MS.gene81729:intron | 40.0% |
| ! | CAGAAAAGGCGGGTATTTTT+AGG | - | chr1.3:43788297-43788316 | None:intergenic | 40.0% |
| ! | GCTCTGTATTGGGTTTTTCT+AGG | + | chr1.3:43786377-43786396 | MS.gene81729:intron | 40.0% |
| ! | GTATTGGGACCATTTAGGTT+GGG | + | chr1.3:43787015-43787034 | MS.gene81729:intron | 40.0% |
| ! | GTTCTGAGCTGTTCTTTGTT+AGG | + | chr1.3:43788976-43788995 | MS.gene81729:intron | 40.0% |
| ! | TCGGTTCGAATTCACAAATG+CGG | + | chr1.3:43785263-43785282 | MS.gene81729:CDS | 40.0% |
| ! | TCTGTTCTCTCTTTTCTGTG+AGG | - | chr1.3:43788028-43788047 | None:intergenic | 40.0% |
| ! | TCTTCCTTCAGTCAGCATTT+TGG | + | chr1.3:43784942-43784961 | MS.gene81729:CDS | 40.0% |
| ! | TGCATTGTTGCCACACATTT+TGG | + | chr1.3:43785077-43785096 | MS.gene81729:intron | 40.0% |
| ! | TGGCATTTTGTATTCCGAGT+AGG | + | chr1.3:43786471-43786490 | MS.gene81729:intron | 40.0% |
| ! | TGGGTTTATTTGCTGCCTAT+AGG | - | chr1.3:43786017-43786036 | None:intergenic | 40.0% |
| ! | TTTATTTGCTGCCTATAGGC+CGG | - | chr1.3:43786013-43786032 | None:intergenic | 40.0% |
| !! | AGTCAGCATTTTGGTGGAAT+GGG | + | chr1.3:43784951-43784970 | MS.gene81729:CDS | 40.0% |
| !! | GCATACTGTGTTACTGACTT+AGG | + | chr1.3:43789107-43789126 | MS.gene81729:intron | 40.0% |
| !! | TGAAGGTGTCTAATTGCAGA+AGG | + | chr1.3:43789085-43789104 | MS.gene81729:intron | 40.0% |
| !! | TTGCAGTTGAAGGACTAGTT+GGG | + | chr1.3:43789048-43789067 | MS.gene81729:intron | 40.0% |
| !!! | AATCAAACCCAGGAGCATTT+TGG | + | chr1.3:43786121-43786140 | MS.gene81729:CDS | 40.0% |
| !!! | ATCAAACCCAGGAGCATTTT+GGG | + | chr1.3:43786122-43786141 | MS.gene81729:CDS | 40.0% |
| !!! | GGTGTAATTGCTGTTTTAGC+TGG | + | chr1.3:43787078-43787097 | MS.gene81729:intron | 40.0% |
| !!! | TCCTTTTCTAGCTACTATGC+AGG | + | chr1.3:43788535-43788554 | MS.gene81729:intron | 40.0% |
| AAACCTTCATCACTTGTGGC+TGG | + | chr1.3:43786223-43786242 | MS.gene81729:CDS | 45.0% | |
| AAAGAACAGCTCAGAACCCT+TGG | - | chr1.3:43788973-43788992 | None:intergenic | 45.0% | |
| AACATGACGCCATAGAATGG+CGG | - | chr1.3:43788383-43788402 | None:intergenic | 45.0% | |
| AAGAAGAAAACGGAGGCGAA+GGG | - | chr1.3:43784926-43784945 | None:intergenic | 45.0% | |
| AATATGCGTCCTTTGCTGCA+AGG | - | chr1.3:43786044-43786063 | None:intergenic | 45.0% | |
| AATGGCGTAACGGCAAATGA+CGG | + | chr1.3:43787518-43787537 | MS.gene81729:intron | 45.0% | |
| ACTTATGAGACCGTCATCTG+TGG | + | chr1.3:43785886-43785905 | MS.gene81729:CDS | 45.0% | |
| ATAATCGGAGTTTGGCTGAG+AGG | - | chr1.3:43788920-43788939 | None:intergenic | 45.0% | |
| ATCATCGCACAGAAACAGTG+GGG | - | chr1.3:43789385-43789404 | None:intergenic | 45.0% | |
| ATGGGGACGTTAGGATCTTT+CGG | + | chr1.3:43785244-43785263 | MS.gene81729:CDS | 45.0% | |
| ATTACGAGGCCCAACCTAAA+TGG | - | chr1.3:43787027-43787046 | None:intergenic | 45.0% | |
| ATTCACTTCGTGGGACTGTT+TGG | + | chr1.3:43785532-43785551 | MS.gene81729:intron | 45.0% | |
| ATTTGCATGGGTTTCTCAGC+TGG | + | chr1.3:43787184-43787203 | MS.gene81729:intron | 45.0% | |
| CAGTTAAGGATGGATCGTTC+AGG | + | chr1.3:43788843-43788862 | MS.gene81729:intron | 45.0% | |
| CCAAGAATGTCTGCAACTTC+AGG | - | chr1.3:43789659-43789678 | None:intergenic | 45.0% | |
| CCTGAAGTTGCAGACATTCT+TGG | + | chr1.3:43789656-43789675 | MS.gene81729:CDS | 45.0% | |
| CGAATGCGATTCAGAAAAGG+CGG | - | chr1.3:43788308-43788327 | None:intergenic | 45.0% | |
| CTGAACGATCCATCCTTAAC+TGG | - | chr1.3:43788845-43788864 | None:intergenic | 45.0% | |
| CTGAAGGAAGAAGAAAACGG+AGG | - | chr1.3:43784933-43784952 | None:intergenic | 45.0% | |
| CTTATGAGACCGTCATCTGT+GGG | + | chr1.3:43785887-43785906 | MS.gene81729:CDS | 45.0% | |
| CTTCAGAGTTTCCAAGGTCA+TGG | + | chr1.3:43785863-43785882 | MS.gene81729:intron | 45.0% | |
| GAATCATCGCACAGAAACAG+TGG | - | chr1.3:43789387-43789406 | None:intergenic | 45.0% | |
| GAATGCGATTCAGAAAAGGC+GGG | - | chr1.3:43788307-43788326 | None:intergenic | 45.0% | |
| GACCAATGATTGTTCCAGAC+AGG | - | chr1.3:43788886-43788905 | None:intergenic | 45.0% | |
| GCGAATAAAGAAGAGGGTAG+TGG | + | chr1.3:43788185-43788204 | MS.gene81729:intron | 45.0% | |
| GGTAATCTACTTTGACTCCC+TGG | - | chr1.3:43786268-43786287 | None:intergenic | 45.0% | |
| GGTCTAAGAGACGATTGAAC+AGG | - | chr1.3:43785319-43785338 | None:intergenic | 45.0% | |
| GTCATGTTGAATTTCCGCCA+TGG | + | chr1.3:43788395-43788414 | MS.gene81729:intron | 45.0% | |
| GTCTCATAAGTCCATGACCT+TGG | - | chr1.3:43785877-43785896 | None:intergenic | 45.0% | |
| GTTCACCCAAAGCATGTACA+AGG | - | chr1.3:43787314-43787333 | None:intergenic | 45.0% | |
| TAACCCAGGGCCCTAATAAT+CGG | - | chr1.3:43788935-43788954 | None:intergenic | 45.0% | |
| TAGATCACATGACCCAACTC+AGG | - | chr1.3:43788257-43788276 | None:intergenic | 45.0% | |
| TAGGGTTAGGGTTAGGGATT+GGG | - | chr1.3:43784659-43784678 | None:intergenic | 45.0% | |
| TCCTTTGCTGCAAGGATTGT+GGG | - | chr1.3:43786036-43786055 | None:intergenic | 45.0% | |
| TGAACAGGTCTCTGTTGATG+TGG | - | chr1.3:43785304-43785323 | None:intergenic | 45.0% | |
| TGCATACCTTGTGATGCACT+TGG | - | chr1.3:43785932-43785951 | None:intergenic | 45.0% | |
| TGCTCCTGGGTTTGATTAGA+AGG | - | chr1.3:43786118-43786137 | None:intergenic | 45.0% | |
| TTAGGGTTAGGGTTAGGGAT+TGG | - | chr1.3:43784660-43784679 | None:intergenic | 45.0% | |
| TTGAGATTGTGAGGATTCGG+TGG | - | chr1.3:43784556-43784575 | None:intergenic | 45.0% | |
| TTGTTGCCCAAAATGCTCCT+GGG | - | chr1.3:43786131-43786150 | None:intergenic | 45.0% | |
| TTTGCATGGGTTTCTCAGCT+GGG | + | chr1.3:43787185-43787204 | MS.gene81729:intron | 45.0% | |
| ! | AACAGAGGGCTTTGTGATGA+TGG | + | chr1.3:43788042-43788061 | MS.gene81729:intron | 45.0% |
| ! | GGATTTCGGGTGAATGAAGA+CGG | - | chr1.3:43784744-43784763 | None:intergenic | 45.0% |
| ! | GTACATGCTTTGGGTGAACA+GGG | + | chr1.3:43787315-43787334 | MS.gene81729:intron | 45.0% |
| ! | GTGGCATTTGTTGCAGTTGA+AGG | + | chr1.3:43789038-43789057 | MS.gene81729:intron | 45.0% |
| ! | GTTGCAGTTGAAGGACTAGT+TGG | + | chr1.3:43789047-43789066 | MS.gene81729:intron | 45.0% |
| ! | TCCACCAAAATGCTGACTGA+AGG | - | chr1.3:43784949-43784968 | None:intergenic | 45.0% |
| ! | TCCTTCAGTCAGCATTTTGG+TGG | + | chr1.3:43784945-43784964 | MS.gene81729:CDS | 45.0% |
| ! | TGTACATGCTTTGGGTGAAC+AGG | + | chr1.3:43787314-43787333 | MS.gene81729:intron | 45.0% |
| ! | TTATTTGCTGCCTATAGGCC+GGG | - | chr1.3:43786012-43786031 | None:intergenic | 45.0% |
| !! | CAGTCAGCATTTTGGTGGAA+TGG | + | chr1.3:43784950-43784969 | MS.gene81729:CDS | 45.0% |
| !! | TAATCAACCTGCTGGTTCTC+AGG | + | chr1.3:43785360-43785379 | MS.gene81729:CDS | 45.0% |
| !! | TGCAGTTGAAGGACTAGTTG+GGG | + | chr1.3:43789049-43789068 | MS.gene81729:intron | 45.0% |
| !!! | TTATTTTGAGCAGAAGGCGG+CGG | - | chr1.3:43785343-43785362 | None:intergenic | 45.0% |
| !!! | TACATTATATTTTTATTATT+AGG | + | chr1.3:43789610-43789629 | MS.gene81729:intron | 5.0% |
| AAACCCATTTCGGCCTGAGT+TGG | + | chr1.3:43788241-43788260 | MS.gene81729:intron | 50.0% | |
| AACCCATTTCGGCCTGAGTT+GGG | + | chr1.3:43788242-43788261 | MS.gene81729:intron | 50.0% | |
| AACGTCCCCATTCCTTGCAT+TGG | - | chr1.3:43785235-43785254 | None:intergenic | 50.0% | |
| AACTCCGATTATTAGGGCCC+TGG | + | chr1.3:43788928-43788947 | MS.gene81729:intron | 50.0% | |
| AATCAGCCATGGTTGTCGTC+TGG | + | chr1.3:43785959-43785978 | MS.gene81729:CDS | 50.0% | |
| AATTCACAAATGCGGCCAGG+TGG | + | chr1.3:43785271-43785290 | MS.gene81729:CDS | 50.0% | |
| ACACTAACCTGAGAACCAGC+AGG | - | chr1.3:43785370-43785389 | None:intergenic | 50.0% | |
| ACAGGTCTCTGTTGATGTGG+AGG | - | chr1.3:43785301-43785320 | None:intergenic | 50.0% | |
| ACCCACAATCCTTGCAGCAA+AGG | + | chr1.3:43786032-43786051 | MS.gene81729:CDS | 50.0% | |
| ACTCCGATTATTAGGGCCCT+GGG | + | chr1.3:43788929-43788948 | MS.gene81729:intron | 50.0% | |
| ACTGTGTCGGAGGAGGATTT+CGG | - | chr1.3:43784758-43784777 | None:intergenic | 50.0% | |
| ACTTCGTGGGACTGTTTGGA+AGG | + | chr1.3:43785536-43785555 | MS.gene81729:intron | 50.0% | |
| AGCCGAGGAAATCGATGAAG+CGG | - | chr1.3:43784853-43784872 | None:intergenic | 50.0% | |
| AGGGTTAGGGTTAGGGATTG+GGG | - | chr1.3:43784658-43784677 | None:intergenic | 50.0% | |
| ATCAGCCATGGTTGTCGTCT+GGG | + | chr1.3:43785960-43785979 | MS.gene81729:CDS | 50.0% | |
| ATCGATGAAGCGGGATTGGA+CGG | - | chr1.3:43784843-43784862 | None:intergenic | 50.0% | |
| ATGCAAGGAATGGGGACGTT+AGG | + | chr1.3:43785235-43785254 | MS.gene81729:CDS | 50.0% | |
| ATTGGGGAGGAAGTGGAGTT+GGG | - | chr1.3:43784710-43784729 | None:intergenic | 50.0% | |
| CACAGGTTACAAGGCTACAG+GGG | + | chr1.3:43786188-43786207 | MS.gene81729:CDS | 50.0% | |
| CATCCATGAGCTAGTCCATC+AGG | + | chr1.3:43786348-43786367 | MS.gene81729:CDS | 50.0% | |
| CATGTCTAATGGGGGACTTG+AGG | - | chr1.3:43786906-43786925 | None:intergenic | 50.0% | |
| CCACAGGTTACAAGGCTACA+GGG | + | chr1.3:43786187-43786206 | MS.gene81729:CDS | 50.0% | |
| CCATCTCCAAGTGCATCACA+AGG | + | chr1.3:43785923-43785942 | MS.gene81729:CDS | 50.0% | |
| CCTTGTGATGCACTTGGAGA+TGG | - | chr1.3:43785926-43785945 | None:intergenic | 50.0% | |
| CGGCGAATGCGATTCAGAAA+AGG | - | chr1.3:43788311-43788330 | None:intergenic | 50.0% | |
| CTTGTTGCCCAAAATGCTCC+TGG | - | chr1.3:43786132-43786151 | None:intergenic | 50.0% | |
| GAAGAAGAAAACGGAGGCGA+AGG | - | chr1.3:43784927-43784946 | None:intergenic | 50.0% | |
| GAAGTGGAGTTGGGGGTTTA+GGG | - | chr1.3:43784701-43784720 | None:intergenic | 50.0% | |
| GAGTAATGTGACTGTGTCGG+AGG | - | chr1.3:43784768-43784787 | None:intergenic | 50.0% | |
| GCGGAGAAGAATGAAGAGAG+TGG | + | chr1.3:43787997-43788016 | MS.gene81729:intron | 50.0% | |
| GCTGCTCCCTTCCAATTAAG+TGG | + | chr1.3:43786696-43786715 | MS.gene81729:intron | 50.0% | |
| GGAAATCGATGAAGCGGGAT+TGG | - | chr1.3:43784847-43784866 | None:intergenic | 50.0% | |
| GGGCCAGTCTAAACTGTGTT+CGG | - | chr1.3:43786858-43786877 | None:intergenic | 50.0% | |
| GGGCCCTAATAATCGGAGTT+TGG | - | chr1.3:43788928-43788947 | None:intergenic | 50.0% | |
| GTCCTTTGCTGCAAGGATTG+TGG | - | chr1.3:43786037-43786056 | None:intergenic | 50.0% | |
| TAATGTGACTGTGTCGGAGG+AGG | - | chr1.3:43784765-43784784 | None:intergenic | 50.0% | |
| TCGAATTCACAAATGCGGCC+AGG | + | chr1.3:43785268-43785287 | MS.gene81729:CDS | 50.0% | |
| TGTCCAGCCACAAGTGATGA+AGG | - | chr1.3:43786229-43786248 | None:intergenic | 50.0% | |
| TTAGGGTTAGGGATTGGGGA+AGG | - | chr1.3:43784654-43784673 | None:intergenic | 50.0% | |
| ! | ACACAGTTTAGACTGGCCCA+AGG | + | chr1.3:43786859-43786878 | MS.gene81729:intron | 50.0% |
| ! | AGGATGTGATGGTGCTGAGA+TGG | - | chr1.3:43784634-43784653 | None:intergenic | 50.0% |
| ! | GCTCTGGGCTTTGTCATAGA+TGG | + | chr1.3:43786991-43787010 | MS.gene81729:intron | 50.0% |
| ! | GCTTGTGAAGGATTAGCGGA+AGG | - | chr1.3:43784810-43784829 | None:intergenic | 50.0% |
| ! | GGATGTGATGGTGCTGAGAT+GGG | - | chr1.3:43784633-43784652 | None:intergenic | 50.0% |
| ! | GGGGTTTAGGGTTTGGAGTT+TGG | - | chr1.3:43784689-43784708 | None:intergenic | 50.0% |
| ! | GGTGGTGGTTGTTGTTGTTG+TGG | - | chr1.3:43784579-43784598 | None:intergenic | 50.0% |
| ! | GTGAAGGATTAGCGGAAGGT+GGG | - | chr1.3:43784806-43784825 | None:intergenic | 50.0% |
| ! | TATTTGCTGCCTATAGGCCG+GGG | - | chr1.3:43786011-43786030 | None:intergenic | 50.0% |
| ! | TGTGAAGGATTAGCGGAAGG+TGG | - | chr1.3:43784807-43784826 | None:intergenic | 50.0% |
| ! | TTTCGGGTGAATGAAGACGG+AGG | - | chr1.3:43784741-43784760 | None:intergenic | 50.0% |
| !! | AGAGGGCTTTGTGATGATGG+TGG | + | chr1.3:43788045-43788064 | MS.gene81729:intron | 50.0% |
| !! | AGATTGTGAGGATTCGGTGG+TGG | - | chr1.3:43784553-43784572 | None:intergenic | 50.0% |
| !! | GACGGGTTACAATTCGACTC+TGG | + | chr1.3:43789467-43789486 | MS.gene81729:intron | 50.0% |
| !! | GGCTTTGTGATGATGGTGGT+CGG | + | chr1.3:43788049-43788068 | MS.gene81729:intron | 50.0% |
| !! | TAGTGGTGGTGGTCACAGTT+GGG | + | chr1.3:43788103-43788122 | MS.gene81729:intron | 50.0% |
| !! | TCCCGCTTCATCGATTTCCT+CGG | + | chr1.3:43784848-43784867 | MS.gene81729:CDS | 50.0% |
| !! | TTTGTGATGATGGTGGTCGG+TGG | + | chr1.3:43788052-43788071 | MS.gene81729:intron | 50.0% |
| AAGACGGAGGAGGACGTGAT+TGG | - | chr1.3:43784728-43784747 | None:intergenic | 55.0% | |
| ACTCCCTGGTTGAACTGCAC+CGG | - | chr1.3:43786254-43786273 | None:intergenic | 55.0% | |
| AGACCTTCAGCGTGCCTACT+CGG | - | chr1.3:43786488-43786507 | None:intergenic | 55.0% | |
| AGACGGAGGAGGACGTGATT+GGG | - | chr1.3:43784727-43784746 | None:intergenic | 55.0% | |
| AGTCCGGTGCAGTTCAACCA+GGG | + | chr1.3:43786248-43786267 | MS.gene81729:CDS | 55.0% | |
| ATACAGAGCAGCGCACCTGA+TGG | - | chr1.3:43786366-43786385 | None:intergenic | 55.0% | |
| ATGACGCCATAGAATGGCGG+TGG | - | chr1.3:43788380-43788399 | None:intergenic | 55.0% | |
| ATGGGAGGGGTAGAGGATGT+GGG | - | chr1.3:43784615-43784634 | None:intergenic | 55.0% | |
| ATTCCGAGTAGGCACGCTGA+AGG | + | chr1.3:43786482-43786501 | MS.gene81729:intron | 55.0% | |
| CAGGTGCGCTGCTCTGTATT+GGG | + | chr1.3:43786367-43786386 | MS.gene81729:intron | 55.0% | |
| CATGACCGTAATCCTTGCGG+CGG | + | chr1.3:43788332-43788351 | MS.gene81729:intron | 55.0% | |
| CCAATTGCCATACCGCCTCT+CGG | - | chr1.3:43784882-43784901 | None:intergenic | 55.0% | |
| CGAGCGCCAATGCAAGGAAT+GGG | + | chr1.3:43785226-43785245 | MS.gene81729:CDS | 55.0% | |
| CGCAAGGATTACGGTCATGG+CGG | - | chr1.3:43788331-43788350 | None:intergenic | 55.0% | |
| CGCCATGACCGTAATCCTTG+CGG | + | chr1.3:43788329-43788348 | MS.gene81729:intron | 55.0% | |
| CTCACCAGCCACAGGTTACA+AGG | + | chr1.3:43786179-43786198 | MS.gene81729:CDS | 55.0% | |
| CTGCTGTGAAGCTGTTGGCA+TGG | - | chr1.3:43786083-43786102 | None:intergenic | 55.0% | |
| CTGTGTCGGAGGAGGATTTC+GGG | - | chr1.3:43784757-43784776 | None:intergenic | 55.0% | |
| CTTGGAGATGGAGCTGAAGG+TGG | - | chr1.3:43785914-43785933 | None:intergenic | 55.0% | |
| CTTGTAACCTGTGGCTGGTG+AGG | - | chr1.3:43786181-43786200 | None:intergenic | 55.0% | |
| GAAGGTGGTCCCACAGATGA+CGG | - | chr1.3:43785899-43785918 | None:intergenic | 55.0% | |
| GAATCACAACCTCCGGTCAC+CGG | + | chr1.3:43784513-43784532 | MS.gene81729:CDS | 55.0% | |
| GACCCAACTCAGGCCGAAAT+GGG | - | chr1.3:43788247-43788266 | None:intergenic | 55.0% | |
| GAGCGCCAATGCAAGGAATG+GGG | + | chr1.3:43785227-43785246 | MS.gene81729:CDS | 55.0% | |
| GATTGGGGAGGAAGTGGAGT+TGG | - | chr1.3:43784711-43784730 | None:intergenic | 55.0% | |
| GCACTTGGAGATGGAGCTGA+AGG | - | chr1.3:43785917-43785936 | None:intergenic | 55.0% | |
| GCCACAGGTTACAAGGCTAC+AGG | + | chr1.3:43786186-43786205 | MS.gene81729:CDS | 55.0% | |
| GCCGAGGAAATCGATGAAGC+GGG | - | chr1.3:43784852-43784871 | None:intergenic | 55.0% | |
| GCGTGGCAGAATTAGCATGG+AGG | - | chr1.3:43788358-43788377 | None:intergenic | 55.0% | |
| GGAAGTGGAGTTGGGGGTTT+AGG | - | chr1.3:43784702-43784721 | None:intergenic | 55.0% | |
| GGGATTGGGGAAGGATGTGA+TGG | - | chr1.3:43784645-43784664 | None:intergenic | 55.0% | |
| GTGGCGTGGCAGAATTAGCA+TGG | - | chr1.3:43788361-43788380 | None:intergenic | 55.0% | |
| GTTGTCGAATGGTTGCGCCA+TGG | - | chr1.3:43788415-43788434 | None:intergenic | 55.0% | |
| TCACTTGTGGCTGGACAGTC+CGG | + | chr1.3:43786232-43786251 | MS.gene81729:CDS | 55.0% | |
| TCAGGTGCGCTGCTCTGTAT+TGG | + | chr1.3:43786366-43786385 | MS.gene81729:intron | 55.0% | |
| TCGCACAGAAACAGTGGGGA+AGG | - | chr1.3:43789381-43789400 | None:intergenic | 55.0% | |
| TGACCCAACTCAGGCCGAAA+TGG | - | chr1.3:43788248-43788267 | None:intergenic | 55.0% | |
| TGCTGCTGCTGTGAAGCTGT+TGG | - | chr1.3:43786088-43786107 | None:intergenic | 55.0% | |
| TGGTGGTCACAGTTGGGTAG+TGG | + | chr1.3:43788109-43788128 | MS.gene81729:intron | 55.0% | |
| TTGGGGAGGAAGTGGAGTTG+GGG | - | chr1.3:43784709-43784728 | None:intergenic | 55.0% | |
| ! | AGTTAGGTGGTGGTCGCAGT+TGG | + | chr1.3:43788079-43788098 | MS.gene81729:intron | 55.0% |
| ! | GGAGTTGGGGGTTTAGGGTT+TGG | - | chr1.3:43784696-43784715 | None:intergenic | 55.0% |
| ! | GTGATGGTGCTGAGATGGGA+GGG | - | chr1.3:43784629-43784648 | None:intergenic | 55.0% |
| ! | GTTAGGTGGTGGTCGCAGTT+GGG | + | chr1.3:43788080-43788099 | MS.gene81729:intron | 55.0% |
| ! | TGATGGTGCTGAGATGGGAG+GGG | - | chr1.3:43784628-43784647 | None:intergenic | 55.0% |
| ! | TGGCATGGATTGCTGCTGCT+GGG | - | chr1.3:43786068-43786087 | None:intergenic | 55.0% |
| ! | TGGTCACAGTTGGGTAGTGG+TGG | + | chr1.3:43788112-43788131 | MS.gene81729:intron | 55.0% |
| ! | TGTGATGGTGCTGAGATGGG+AGG | - | chr1.3:43784630-43784649 | None:intergenic | 55.0% |
| ! | TTGGCATGGATTGCTGCTGC+TGG | - | chr1.3:43786069-43786088 | None:intergenic | 55.0% |
| !! | CCCTGTAGCCTTGTAACCTG+TGG | - | chr1.3:43786190-43786209 | None:intergenic | 55.0% |
| !! | GCACCTGATGGACTAGCTCA+TGG | - | chr1.3:43786354-43786373 | None:intergenic | 55.0% |
| !! | GGATTCGGTGGTGGTTCTAG+CGG | - | chr1.3:43784544-43784563 | None:intergenic | 55.0% |
| !! | GTAGCCTTGTAACCTGTGGC+TGG | - | chr1.3:43786186-43786205 | None:intergenic | 55.0% |
| !! | GTAGTGGTGGTGGTCACAGT+TGG | + | chr1.3:43788102-43788121 | MS.gene81729:intron | 55.0% |
| !! | TGATGTGGAGGCATTCCACC+TGG | - | chr1.3:43785289-43785308 | None:intergenic | 55.0% |
| AAAACGGAGGCGAAGGGCTC+TGG | - | chr1.3:43784920-43784939 | None:intergenic | 60.0% | |
| ACATGTGCCTCACCAGCCAC+AGG | + | chr1.3:43786171-43786190 | MS.gene81729:CDS | 60.0% | |
| CAGTCCGGTGCAGTTCAACC+AGG | + | chr1.3:43786247-43786266 | MS.gene81729:CDS | 60.0% | |
| CCGAGAGGCGGTATGGCAAT+TGG | + | chr1.3:43784879-43784898 | MS.gene81729:CDS | 60.0% | |
| CGCCGCAAGGATTACGGTCA+TGG | - | chr1.3:43788334-43788353 | None:intergenic | 60.0% | |
| CGGGTGAATGAAGACGGAGG+AGG | - | chr1.3:43784738-43784757 | None:intergenic | 60.0% | |
| CGGTGGTCGAAGTTAGGTGG+TGG | + | chr1.3:43788069-43788088 | MS.gene81729:intron | 60.0% | |
| CTATAGGCCGGGGATGGCAA+AGG | - | chr1.3:43786001-43786020 | None:intergenic | 60.0% | |
| CTTTGCCATCCCCGGCCTAT+AGG | + | chr1.3:43785999-43786018 | MS.gene81729:CDS | 60.0% | |
| GAAGCCTCCTTTGCCATCCC+CGG | + | chr1.3:43785991-43786010 | MS.gene81729:CDS | 60.0% | |
| GACGGAGGAGGACGTGATTG+GGG | - | chr1.3:43784726-43784745 | None:intergenic | 60.0% | |
| GATGGCAAAGGAGGCTTCCC+TGG | - | chr1.3:43785989-43786008 | None:intergenic | 60.0% | |
| GATGGGAGGGGTAGAGGATG+TGG | - | chr1.3:43784616-43784635 | None:intergenic | 60.0% | |
| GATGTGGGTGGAGGGAGAGA+GGG | - | chr1.3:43784600-43784619 | None:intergenic | 60.0% | |
| GCACGCTGAAGGTCTCCTGT+TGG | + | chr1.3:43786493-43786512 | MS.gene81729:intron | 60.0% | |
| GCGAGCGCCAATGCAAGGAA+TGG | + | chr1.3:43785225-43785244 | MS.gene81729:CDS | 60.0% | |
| GGACGTGATTGGGGAGGAAG+TGG | - | chr1.3:43784717-43784736 | None:intergenic | 60.0% | |
| GGGTAGAGGATGTGGGTGGA+GGG | - | chr1.3:43784608-43784627 | None:intergenic | 60.0% | |
| GGTCGGTGGTCGAAGTTAGG+TGG | + | chr1.3:43788066-43788085 | MS.gene81729:intron | 60.0% | |
| GGTGGTCGGTGGTCGAAGTT+AGG | + | chr1.3:43788063-43788082 | MS.gene81729:intron | 60.0% | |
| GTCGAATGGTTGCGCCATGG+CGG | - | chr1.3:43788412-43788431 | None:intergenic | 60.0% | |
| GTTACAAGGCTACAGGGGCC+AGG | + | chr1.3:43786193-43786212 | MS.gene81729:CDS | 60.0% | |
| TAGGTGCGAGCGCCAATGCA+AGG | + | chr1.3:43785220-43785239 | MS.gene81729:intron | 60.0% | |
| TGCTGAGATGGGAGGGGTAG+AGG | - | chr1.3:43784622-43784641 | None:intergenic | 60.0% | |
| TGGGGAGGAAGTGGAGTTGG+GGG | - | chr1.3:43784708-43784727 | None:intergenic | 60.0% | |
| TGGTGGTCGCAGTTGGGTAG+TGG | + | chr1.3:43788086-43788105 | MS.gene81729:intron | 60.0% | |
| TGTGGCTGGTGAGGCACATG+TGG | - | chr1.3:43786172-43786191 | None:intergenic | 60.0% | |
| ! | TCGCAGTTGGGTAGTGGTGG+TGG | + | chr1.3:43788092-43788111 | MS.gene81729:intron | 60.0% |
| ! | TGGTCGCAGTTGGGTAGTGG+TGG | + | chr1.3:43788089-43788108 | MS.gene81729:intron | 60.0% |
| ! | TTTTGAGCAGAAGGCGGCGG+TGG | - | chr1.3:43785340-43785359 | None:intergenic | 60.0% |
| !! | GGTGGTTCTAGCGGTGGTTC+CGG | - | chr1.3:43784535-43784554 | None:intergenic | 60.0% |
| !! | TTCGGTGGTGGTTCTAGCGG+TGG | - | chr1.3:43784541-43784560 | None:intergenic | 60.0% |
| CTAGCGGTGGTTCCGGTGAC+CGG | - | chr1.3:43784528-43784547 | None:intergenic | 65.0% | |
| GCCACGCCACCGCCATTCTA+TGG | + | chr1.3:43788371-43788390 | MS.gene81729:intron | 65.0% | |
| GCCATAGAATGGCGGTGGCG+TGG | - | chr1.3:43788375-43788394 | None:intergenic | 65.0% | |
| GGAGGAGGACGTGATTGGGG+AGG | - | chr1.3:43784723-43784742 | None:intergenic | 65.0% | |
| GGAGGCCGCCGCAAGGATTA+CGG | - | chr1.3:43788340-43788359 | None:intergenic | 65.0% | |
| GGAGGGGTAGAGGATGTGGG+TGG | - | chr1.3:43784612-43784631 | None:intergenic | 65.0% | |
| GGATGTGGGTGGAGGGAGAG+AGG | - | chr1.3:43784601-43784620 | None:intergenic | 65.0% | |
| GGCAAAGGAGGCTTCCCTGG+TGG | - | chr1.3:43785986-43786005 | None:intergenic | 65.0% | |
| GGGGTAGAGGATGTGGGTGG+AGG | - | chr1.3:43784609-43784628 | None:intergenic | 65.0% | |
| GGTGGCCCAGACGACAACCA+TGG | - | chr1.3:43785968-43785987 | None:intergenic | 65.0% | |
| GGTTGTCGTCTGGGCCACCA+GGG | + | chr1.3:43785969-43785988 | MS.gene81729:CDS | 65.0% | |
| TAGGCCGGGGATGGCAAAGG+AGG | - | chr1.3:43785998-43786017 | None:intergenic | 65.0% | |
| TGCTGCCTATAGGCCGGGGA+TGG | - | chr1.3:43786007-43786026 | None:intergenic | 65.0% | |
| TGGTTGTCGTCTGGGCCACC+AGG | + | chr1.3:43785968-43785987 | MS.gene81729:CDS | 65.0% | |
| TTAGCATGGAGGCCGCCGCA+AGG | - | chr1.3:43788347-43788366 | None:intergenic | 65.0% | |
| TTCTGCGCCGAGAGGCGGTA+TGG | + | chr1.3:43784872-43784891 | MS.gene81729:CDS | 65.0% | |
| GGTGGAGGGAGAGAGGGTGG+TGG | - | chr1.3:43784594-43784613 | None:intergenic | 70.0% | |
| GTGGGTGGAGGGAGAGAGGG+TGG | - | chr1.3:43784597-43784616 | None:intergenic | 70.0% | |
| TCCTCGGCTTCTGCGCCGAG+AGG | + | chr1.3:43784864-43784883 | MS.gene81729:CDS | 70.0% | |
| TCGGCTTCTGCGCCGAGAGG+CGG | + | chr1.3:43784867-43784886 | MS.gene81729:CDS | 70.0% | |
| ! | ACGGAGGCGAAGGGCTCTGG+TGG | - | chr1.3:43784917-43784936 | None:intergenic | 70.0% |
| ! | CGAAGGGCTCTGGTGGTGCG+CGG | - | chr1.3:43784910-43784929 | None:intergenic | 70.0% |
| ! | GAAGGGCTCTGGTGGTGCGC+GGG | - | chr1.3:43784909-43784928 | None:intergenic | 70.0% |
| GCCTCTCGGCGCAGAAGCCG+AGG | - | chr1.3:43784868-43784887 | None:intergenic | 75.0% | |
| GCGGTGGTTCCGGTGACCGG+AGG | - | chr1.3:43784525-43784544 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 43784510 | 43789706 | 43784510 | ID=MS.gene81729 |
| chr1.3 | mRNA | 43784510 | 43789706 | 43784510 | ID=MS.gene81729.t1;Parent=MS.gene81729 |
| chr1.3 | exon | 43784510 | 43785010 | 43784510 | ID=MS.gene81729.t1.exon1;Parent=MS.gene81729.t1 |
| chr1.3 | CDS | 43784510 | 43785010 | 43784510 | ID=cds.MS.gene81729.t1;Parent=MS.gene81729.t1 |
| chr1.3 | exon | 43785223 | 43785381 | 43785223 | ID=MS.gene81729.t1.exon2;Parent=MS.gene81729.t1 |
| chr1.3 | CDS | 43785223 | 43785381 | 43785223 | ID=cds.MS.gene81729.t1;Parent=MS.gene81729.t1 |
| chr1.3 | exon | 43785869 | 43786369 | 43785869 | ID=MS.gene81729.t1.exon3;Parent=MS.gene81729.t1 |
| chr1.3 | CDS | 43785869 | 43786369 | 43785869 | ID=cds.MS.gene81729.t1;Parent=MS.gene81729.t1 |
| chr1.3 | exon | 43789632 | 43789706 | 43789632 | ID=MS.gene81729.t1.exon4;Parent=MS.gene81729.t1 |
| chr1.3 | CDS | 43789632 | 43789706 | 43789632 | ID=cds.MS.gene81729.t1;Parent=MS.gene81729.t1 |
| Gene Sequence |
| Protein sequence |
