Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31802.t1 | XP_013466358.1 | 98.4 | 371 | 6 | 0 | 1 | 371 | 2 | 372 | 7.00E-221 | 776.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31802.t1 | Q6ZJX0 | 75.5 | 363 | 89 | 0 | 6 | 368 | 10 | 372 | 3.2e-174 | 612.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31802.t1 | A0A072VEI5 | 98.4 | 371 | 6 | 0 | 1 | 371 | 2 | 372 | 5.0e-221 | 776.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene31802 | 0.810282 | 1.25E-50 | -1.69E-46 |
| MS.gene049254 | MS.gene31802 | 0.833599 | 4.86E-56 | -1.69E-46 |
| MS.gene049404 | MS.gene31802 | 0.822073 | 2.88E-53 | -1.69E-46 |
| MS.gene049424 | MS.gene31802 | 0.816307 | 5.92E-52 | -1.69E-46 |
| MS.gene049435 | MS.gene31802 | 0.820997 | 5.10E-53 | -1.69E-46 |
| MS.gene049653 | MS.gene31802 | 0.803215 | 3.88E-49 | -1.69E-46 |
| MS.gene04976 | MS.gene31802 | 0.810649 | 1.04E-50 | -1.69E-46 |
| MS.gene050119 | MS.gene31802 | 0.832611 | 8.57E-56 | -1.69E-46 |
| MS.gene05016 | MS.gene31802 | 0.827531 | 1.49E-54 | -1.69E-46 |
| MS.gene050237 | MS.gene31802 | 0.801852 | 7.40E-49 | -1.69E-46 |
| MS.gene050273 | MS.gene31802 | 0.808326 | 3.27E-50 | -1.69E-46 |
| MS.gene050559 | MS.gene31802 | 0.858317 | 8.95E-63 | -1.69E-46 |
| MS.gene050561 | MS.gene31802 | 0.855581 | 5.73E-62 | -1.69E-46 |
| MS.gene050562 | MS.gene31802 | 0.84056 | 8.08E-58 | -1.69E-46 |
| MS.gene050680 | MS.gene31802 | 0.810479 | 1.13E-50 | -1.69E-46 |
| MS.gene050807 | MS.gene31802 | 0.827409 | 1.59E-54 | -1.69E-46 |
| MS.gene050987 | MS.gene31802 | 0.814222 | 1.72E-51 | -1.69E-46 |
| MS.gene051198 | MS.gene31802 | 0.830437 | 2.94E-55 | -1.69E-46 |
| MS.gene051279 | MS.gene31802 | 0.836827 | 7.45E-57 | -1.69E-46 |
| MS.gene051744 | MS.gene31802 | 0.814005 | 1.92E-51 | -1.69E-46 |
| MS.gene051800 | MS.gene31802 | 0.800836 | 1.20E-48 | -1.69E-46 |
| MS.gene051856 | MS.gene31802 | 0.80351 | 3.37E-49 | -1.69E-46 |
| MS.gene052239 | MS.gene31802 | -0.872884 | 2.26E-67 | -1.69E-46 |
| MS.gene052516 | MS.gene31802 | 0.82304 | 1.72E-53 | -1.69E-46 |
| MS.gene052582 | MS.gene31802 | 0.821534 | 3.84E-53 | -1.69E-46 |
| MS.gene052584 | MS.gene31802 | 0.818631 | 1.77E-52 | -1.69E-46 |
| MS.gene052611 | MS.gene31802 | 0.803103 | 4.09E-49 | -1.69E-46 |
| MS.gene052954 | MS.gene31802 | 0.80493 | 1.71E-49 | -1.69E-46 |
| MS.gene05308 | MS.gene31802 | 0.802391 | 5.74E-49 | -1.69E-46 |
| MS.gene053166 | MS.gene31802 | 0.812815 | 3.51E-51 | -1.69E-46 |
| MS.gene053188 | MS.gene31802 | 0.840244 | 9.77E-58 | -1.69E-46 |
| MS.gene053216 | MS.gene31802 | 0.800467 | 1.42E-48 | -1.69E-46 |
| MS.gene053226 | MS.gene31802 | 0.815624 | 8.40E-52 | -1.69E-46 |
| MS.gene053565 | MS.gene31802 | 0.828089 | 1.09E-54 | -1.69E-46 |
| MS.gene05364 | MS.gene31802 | 0.832745 | 7.93E-56 | -1.69E-46 |
| MS.gene053931 | MS.gene31802 | 0.851577 | 8.10E-61 | -1.69E-46 |
| MS.gene053998 | MS.gene31802 | 0.810456 | 1.14E-50 | -1.69E-46 |
| MS.gene05415 | MS.gene31802 | 0.825387 | 4.82E-54 | -1.69E-46 |
| MS.gene054537 | MS.gene31802 | 0.821752 | 3.42E-53 | -1.69E-46 |
| MS.gene054651 | MS.gene31802 | 0.821533 | 3.84E-53 | -1.69E-46 |
| MS.gene054657 | MS.gene31802 | 0.852194 | 5.42E-61 | -1.69E-46 |
| MS.gene05510 | MS.gene31802 | 0.815765 | 7.82E-52 | -1.69E-46 |
| MS.gene055227 | MS.gene31802 | 0.811568 | 6.56E-51 | -1.69E-46 |
| MS.gene055228 | MS.gene31802 | 0.804663 | 1.94E-49 | -1.69E-46 |
| MS.gene055230 | MS.gene31802 | 0.824076 | 9.82E-54 | -1.69E-46 |
| MS.gene055464 | MS.gene31802 | 0.808118 | 3.62E-50 | -1.69E-46 |
| MS.gene055512 | MS.gene31802 | 0.842433 | 2.59E-58 | -1.69E-46 |
| MS.gene055623 | MS.gene31802 | 0.808966 | 2.39E-50 | -1.69E-46 |
| MS.gene055818 | MS.gene31802 | 0.806502 | 7.97E-50 | -1.69E-46 |
| MS.gene055841 | MS.gene31802 | 0.808958 | 2.40E-50 | -1.69E-46 |
| MS.gene05604 | MS.gene31802 | 0.820745 | 5.83E-53 | -1.69E-46 |
| MS.gene056366 | MS.gene31802 | 0.800914 | 1.15E-48 | -1.69E-46 |
| MS.gene056506 | MS.gene31802 | 0.830465 | 2.89E-55 | -1.69E-46 |
| MS.gene05686 | MS.gene31802 | 0.821631 | 3.64E-53 | -1.69E-46 |
| MS.gene057060 | MS.gene31802 | 0.850895 | 1.26E-60 | -1.69E-46 |
| MS.gene057208 | MS.gene31802 | 0.833024 | 6.76E-56 | -1.69E-46 |
| MS.gene057287 | MS.gene31802 | 0.80794 | 3.95E-50 | -1.69E-46 |
| MS.gene057314 | MS.gene31802 | 0.805545 | 1.27E-49 | -1.69E-46 |
| MS.gene057392 | MS.gene31802 | 0.800549 | 1.37E-48 | -1.69E-46 |
| MS.gene057444 | MS.gene31802 | 0.843622 | 1.25E-58 | -1.69E-46 |
| MS.gene057598 | MS.gene31802 | 0.833043 | 6.69E-56 | -1.69E-46 |
| MS.gene057693 | MS.gene31802 | 0.813968 | 1.96E-51 | -1.69E-46 |
| MS.gene057855 | MS.gene31802 | 0.811022 | 8.62E-51 | -1.69E-46 |
| MS.gene057869 | MS.gene31802 | 0.831176 | 1.94E-55 | -1.69E-46 |
| MS.gene05795 | MS.gene31802 | 0.843612 | 1.26E-58 | -1.69E-46 |
| MS.gene058008 | MS.gene31802 | 0.822975 | 1.78E-53 | -1.69E-46 |
| MS.gene058009 | MS.gene31802 | 0.839035 | 2.02E-57 | -1.69E-46 |
| MS.gene058010 | MS.gene31802 | 0.825825 | 3.80E-54 | -1.69E-46 |
| MS.gene058294 | MS.gene31802 | 0.80849 | 3.02E-50 | -1.69E-46 |
| MS.gene058595 | MS.gene31802 | 0.809334 | 1.99E-50 | -1.69E-46 |
| MS.gene058634 | MS.gene31802 | 0.813449 | 2.55E-51 | -1.69E-46 |
| MS.gene058979 | MS.gene31802 | 0.848874 | 4.64E-60 | -1.69E-46 |
| MS.gene059161 | MS.gene31802 | 0.830561 | 2.74E-55 | -1.69E-46 |
| MS.gene059317 | MS.gene31802 | 0.839049 | 2.00E-57 | -1.69E-46 |
| MS.gene05978 | MS.gene31802 | 0.831995 | 1.22E-55 | -1.69E-46 |
| MS.gene060167 | MS.gene31802 | 0.804099 | 2.54E-49 | -1.69E-46 |
| MS.gene060310 | MS.gene31802 | 0.817536 | 3.13E-52 | -1.69E-46 |
| MS.gene060322 | MS.gene31802 | 0.826303 | 2.92E-54 | -1.69E-46 |
| MS.gene060365 | MS.gene31802 | 0.801428 | 9.05E-49 | -1.69E-46 |
| MS.gene060521 | MS.gene31802 | 0.804021 | 2.64E-49 | -1.69E-46 |
| MS.gene060840 | MS.gene31802 | 0.80769 | 4.47E-50 | -1.69E-46 |
| MS.gene060918 | MS.gene31802 | 0.834181 | 3.48E-56 | -1.69E-46 |
| MS.gene060935 | MS.gene31802 | 0.802464 | 5.54E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene31802 | MS.gene81728 | PPI |
| MS.gene31802 | MS.gene056860 | PPI |
| MS.gene31802 | MS.gene81729 | PPI |
| MS.gene81779 | MS.gene31802 | PPI |
| MS.gene31802 | MS.gene034886 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31802.t1 | MTR_1g028310 | 98.383 | 371 | 6 | 0 | 1 | 371 | 2 | 372 | 0.0 | 761 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31802.t1 | AT3G20740 | 71.507 | 365 | 104 | 0 | 1 | 365 | 1 | 365 | 0.0 | 583 |
Find 88 sgRNAs with CRISPR-Local
Find 230 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGAGTCCTGATTTCATTTA+TGG | 0.161211 | 1.1:-14031143 | None:intergenic |
| AGAAATGAAGTTGTTTAGTT+TGG | 0.226754 | 1.1:+14030308 | None:intergenic |
| GGAGATTGTTCCTTCACTTT+TGG | 0.304329 | 1.1:-14032806 | None:intergenic |
| GGGGCTCCGCTTGCTGTGGC+TGG | 0.309712 | 1.1:+14030887 | MS.gene31802:CDS |
| GGTATAATTCGAGTCATTAA+TGG | 0.331826 | 1.1:+14030920 | MS.gene31802:CDS |
| CATTTCAAGGCATGTGCAAT+AGG | 0.337992 | 1.1:+14032998 | MS.gene31802:CDS |
| TCGCCACAGTTGGTGGCAAT+CGG | 0.340184 | 1.1:+14030466 | MS.gene31802:CDS |
| GAAATGAAGTTGTTTAGTTT+GGG | 0.348766 | 1.1:+14030309 | None:intergenic |
| GACAGAGCAGTTTGCCTGAT+TGG | 0.353858 | 1.1:-14033401 | None:intergenic |
| TTCTTGTGATTTCCATTTCA+AGG | 0.357319 | 1.1:+14032985 | MS.gene31802:CDS |
| ATGAACCATATATCACATTC+AGG | 0.362984 | 1.1:-14032956 | None:intergenic |
| AGGATGAGTCGGTTCGGTTA+TGG | 0.369014 | 1.1:+14031280 | MS.gene31802:intron |
| CTGTTCCTGAATGTGATATA+TGG | 0.380086 | 1.1:+14032951 | MS.gene31802:CDS |
| ATAGAGGACGCTTGCCCTCT+TGG | 0.383210 | 1.1:-14030398 | None:intergenic |
| GTTGATTGTACTAGATGGTT+GGG | 0.389994 | 1.1:+14032145 | MS.gene31802:CDS |
| ATTACGTTGATTGTACTAGA+TGG | 0.390980 | 1.1:+14032140 | MS.gene31802:CDS |
| CTATTGCACATGCCTTGAAA+TGG | 0.404472 | 1.1:-14032997 | None:intergenic |
| CATATATCACATTCAGGAAC+AGG | 0.408036 | 1.1:-14032950 | None:intergenic |
| CTCAATCAAAATCTCCAATC+AGG | 0.426061 | 1.1:+14033387 | MS.gene31802:CDS |
| AGTATTATCCATGCCACAAC+TGG | 0.426956 | 1.1:-14031526 | None:intergenic |
| CAGCAATAACTCCTCCTTGA+AGG | 0.427134 | 1.1:-14030610 | None:intergenic |
| GTTCCCACAAGACAATTTCA+TGG | 0.428181 | 1.1:-14032784 | None:intergenic |
| CGCCACAGTTGGTGGCAATC+GGG | 0.433391 | 1.1:+14030467 | MS.gene31802:CDS |
| ACTAACTTTGCAATAAGAAT+AGG | 0.443448 | 1.1:-14033284 | None:intergenic |
| CTTGCCCTCTTGGAGGCGAT+TGG | 0.444725 | 1.1:-14030388 | None:intergenic |
| TGGATAATACTGTTAAGATA+TGG | 0.449910 | 1.1:+14031538 | MS.gene31802:CDS |
| GGGACTCCATAAATGAAATC+AGG | 0.451609 | 1.1:+14031137 | MS.gene31802:CDS |
| ACTATTTATCAATGCCTTCA+AGG | 0.459450 | 1.1:+14030596 | MS.gene31802:CDS |
| CACAGCAAGCGGAGCCCCAT+TGG | 0.459961 | 1.1:-14030882 | None:intergenic |
| AAAAGTGAAGGAACAATCTC+CGG | 0.462918 | 1.1:+14032808 | MS.gene31802:CDS |
| CATGAAAATAAGTTAAGCTT+CGG | 0.467093 | 1.1:-14033580 | None:intergenic |
| CGTTGATTGTACTAGATGGT+TGG | 0.469880 | 1.1:+14032144 | MS.gene31802:CDS |
| AAAGTGAAGGAACAATCTCC+GGG | 0.472235 | 1.1:+14032809 | MS.gene31802:CDS |
| GAAGAAATAACCTTCCATCA+TGG | 0.474912 | 1.1:-14033424 | None:intergenic |
| TCGGTAACTTGAATTCTTCA+AGG | 0.477006 | 1.1:+14030346 | MS.gene31802:CDS |
| GCTGGGCATGCAATACCAAT+GGG | 0.490406 | 1.1:+14030867 | MS.gene31802:CDS |
| GCTGTGGCTGGAGGAGTCAA+TGG | 0.492947 | 1.1:+14030899 | MS.gene31802:CDS |
| TGTTAAGATATGGTCTATGA+AGG | 0.499381 | 1.1:+14031548 | MS.gene31802:CDS |
| AAGAAATAACCTTCCATCAT+GGG | 0.503957 | 1.1:-14033423 | None:intergenic |
| GGCGAAAACGTTGAAGTAGC+GGG | 0.515363 | 1.1:-14030448 | None:intergenic |
| GCTCCGCTTGCTGTGGCTGG+AGG | 0.526253 | 1.1:+14030890 | MS.gene31802:CDS |
| TTGATTGTACTAGATGGTTG+GGG | 0.530596 | 1.1:+14032146 | MS.gene31802:CDS |
| GCAATCTTAAATATATCTGA+TGG | 0.530601 | 1.1:-14031504 | None:intergenic |
| GCTGCGACGATGGAACAATA+TGG | 0.532008 | 1.1:+14033538 | MS.gene31802:CDS |
| CAAACTGCTCTGTCCCATGA+TGG | 0.534574 | 1.1:+14033410 | MS.gene31802:CDS |
| ACGATGGAACAATATGGCGC+TGG | 0.535341 | 1.1:+14033544 | MS.gene31802:CDS |
| TGACCATGAAATTGTCTTGT+GGG | 0.535677 | 1.1:+14032781 | MS.gene31802:CDS |
| CAATACTTAAGACTTCATTA+CGG | 0.539217 | 1.1:-14031353 | None:intergenic |
| GAATTCAAGTTACCGACCAC+TGG | 0.540698 | 1.1:-14030339 | None:intergenic |
| AGCTGGGCATGCAATACCAA+TGG | 0.542122 | 1.1:+14030866 | MS.gene31802:CDS |
| ATCTGCCAGGCAACAGGGAA+GGG | 0.543112 | 1.1:+14033228 | MS.gene31802:intron |
| TTGAAAACAACAGCATATAG+AGG | 0.543815 | 1.1:-14030414 | None:intergenic |
| CTAGCAGATATCACAAGTGC+TGG | 0.552395 | 1.1:-14031175 | None:intergenic |
| GAGGACGCTTGCCCTCTTGG+AGG | 0.553105 | 1.1:-14030395 | None:intergenic |
| ACTCCTCCAGCCACAGCAAG+CGG | 0.555533 | 1.1:-14030893 | None:intergenic |
| TTGACCAGGATGAGTCGGTT+CGG | 0.559065 | 1.1:+14031274 | MS.gene31802:intron |
| TAAGATTGCCAGTTGTGGCA+TGG | 0.560210 | 1.1:+14031518 | MS.gene31802:CDS |
| AACTTTGCAATAAGAATAGG+AGG | 0.567634 | 1.1:-14033281 | None:intergenic |
| ATATTTAAGATTGCCAGTTG+TGG | 0.568569 | 1.1:+14031513 | MS.gene31802:CDS |
| CAATGGGGCTCCGCTTGCTG+TGG | 0.568999 | 1.1:+14030883 | MS.gene31802:CDS |
| CGATGGAACAATATGGCGCT+GGG | 0.574058 | 1.1:+14033545 | MS.gene31802:CDS |
| TTGATATTTGCTGGAGCTGG+AGG | 0.577096 | 1.1:+14031327 | MS.gene31802:CDS |
| GATCTGCCAGGCAACAGGGA+AGG | 0.581341 | 1.1:+14033227 | MS.gene31802:intron |
| GTTAAGATATGGTCTATGAA+GGG | 0.585488 | 1.1:+14031549 | MS.gene31802:CDS |
| TAGTTCTAACTAACCTCCCC+CGG | 0.588824 | 1.1:-14032827 | None:intergenic |
| CTGCTCTGTCCCATGATGGA+AGG | 0.591974 | 1.1:+14033414 | MS.gene31802:CDS |
| AACCCGATTGCCACCAACTG+TGG | 0.596131 | 1.1:-14030469 | None:intergenic |
| GTCACCAATCGCCTCCAAGA+GGG | 0.603232 | 1.1:+14030384 | MS.gene31802:CDS |
| TTTCATTTATGGAGTCCCCA+TGG | 0.605251 | 1.1:-14031132 | None:intergenic |
| TGGCGAAAACGTTGAAGTAG+CGG | 0.611387 | 1.1:-14030449 | None:intergenic |
| TAAGGTTGACCAGGATGAGT+CGG | 0.612307 | 1.1:+14031269 | MS.gene31802:intron |
| TTGACCATGAAATTGTCTTG+TGG | 0.623303 | 1.1:+14032780 | MS.gene31802:CDS |
| TTTGGATCTGCCAGGCAACA+GGG | 0.637676 | 1.1:+14033223 | MS.gene31802:intron |
| CTTGTGGGAACCAAAAGTGA+AGG | 0.642680 | 1.1:+14032796 | MS.gene31802:CDS |
| ATGTAGAACAATCATTCACA+TGG | 0.644945 | 1.1:+14031970 | MS.gene31802:CDS |
| TAGTTTGGGAACTGAACCAG+TGG | 0.645204 | 1.1:+14030323 | MS.gene31802:CDS |
| CGGTTATGGAATGTTCACAC+TGG | 0.649169 | 1.1:+14031294 | MS.gene31802:CDS |
| AGCAAACACTCACCTTTGAG+AGG | 0.649424 | 1.1:-14032177 | None:intergenic |
| TTGGGAACTGAACCAGTGGT+CGG | 0.669095 | 1.1:+14030327 | MS.gene31802:CDS |
| AAATCAGGACTCAAGCGATG+AGG | 0.677691 | 1.1:+14031152 | MS.gene31802:CDS |
| ATATATCACATTCAGGAACA+GGG | 0.685190 | 1.1:-14032949 | None:intergenic |
| TGATTGTACTAGATGGTTGG+GGG | 0.686806 | 1.1:+14032147 | MS.gene31802:CDS |
| ATTTATCAATGCCTTCAAGG+AGG | 0.700895 | 1.1:+14030599 | MS.gene31802:CDS |
| AGTCACCAATCGCCTCCAAG+AGG | 0.702657 | 1.1:+14030383 | MS.gene31802:CDS |
| AAGTGAAGGAACAATCTCCG+GGG | 0.721249 | 1.1:+14032810 | MS.gene31802:CDS |
| AGTGAAGGAACAATCTCCGG+GGG | 0.721831 | 1.1:+14032811 | MS.gene31802:CDS |
| TAGCGATGAGAAGTTACACA+AGG | 0.725107 | 1.1:+14030943 | MS.gene31802:CDS |
| CTGGGCATGCAATACCAATG+GGG | 0.727775 | 1.1:+14030868 | MS.gene31802:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCAAAACAAATTAATTTA+AGG | - | chr1.1:14031032-14031051 | None:intergenic | 10.0% |
| !! | TTTGATTCAATAATATTTAA+AGG | + | chr1.1:14031045-14031064 | MS.gene31802:intron | 10.0% |
| !!! | ACTTTTAATTATTTTATTGA+AGG | - | chr1.1:14032635-14032654 | None:intergenic | 10.0% |
| !!! | ATTTTACAAATTTATACTTT+TGG | - | chr1.1:14031792-14031811 | None:intergenic | 10.0% |
| !!! | CTTTTAATTATTTTATTGAA+GGG | - | chr1.1:14032634-14032653 | None:intergenic | 10.0% |
| !! | TAAAAAAAAAAGAACAAAGT+GGG | + | chr1.1:14030788-14030807 | MS.gene31802:intron | 15.0% |
| !! | TTAAAAAAAAAAGAACAAAG+TGG | + | chr1.1:14030787-14030806 | MS.gene31802:intron | 15.0% |
| !!! | AAAATTTGTTTTAACTATGA+AGG | + | chr1.1:14031846-14031865 | MS.gene31802:intron | 15.0% |
| !!! | AAATTTGTTTTAACTATGAA+GGG | + | chr1.1:14031847-14031866 | MS.gene31802:intron | 15.0% |
| !!! | ATAAGCAATCATAATATTTT+CGG | - | chr1.1:14031742-14031761 | None:intergenic | 15.0% |
| !!! | ATTTTGCATTTTTGTTTATT+TGG | + | chr1.1:14030693-14030712 | MS.gene31802:intron | 15.0% |
| !!! | TATATATTTTCCTTTTCATT+TGG | + | chr1.1:14032580-14032599 | MS.gene31802:intron | 15.0% |
| !!! | TTTCTAAATATTCTTGTTAT+TGG | + | chr1.1:14033307-14033326 | MS.gene31802:intron | 15.0% |
| !!! | TTTTCATACAATAACTTATA+AGG | + | chr1.1:14031251-14031270 | MS.gene31802:intron | 15.0% |
| !! | AATGAAAAAGACAATACATT+AGG | - | chr1.1:14031907-14031926 | None:intergenic | 20.0% |
| !! | ATAATGAAAACAAGGAATAT+TGG | + | chr1.1:14032334-14032353 | MS.gene31802:intron | 20.0% |
| !! | CTTTGATTATTACCATAATT+TGG | - | chr1.1:14031427-14031446 | None:intergenic | 20.0% |
| !! | GAATGGAAAAAAATAGAAAA+AGG | - | chr1.1:14030500-14030519 | None:intergenic | 20.0% |
| !! | TAAAAGGAATAATGAAAACA+AGG | + | chr1.1:14032326-14032345 | MS.gene31802:intron | 20.0% |
| !! | TCCAAAAGAAAAAGAAAAAA+CGG | - | chr1.1:14033209-14033228 | None:intergenic | 20.0% |
| !!! | AACAAATTTTGACCATTTTT+TGG | + | chr1.1:14032469-14032488 | MS.gene31802:intron | 20.0% |
| !!! | AGGTTATTTCTTCATATTTT+TGG | + | chr1.1:14033434-14033453 | MS.gene31802:intron | 20.0% |
| !!! | ATAATCAAAGTTTTGACATT+TGG | + | chr1.1:14031437-14031456 | MS.gene31802:intron | 20.0% |
| !!! | GTAACAATAATTTGTTAGTT+TGG | + | chr1.1:14030976-14030995 | MS.gene31802:intron | 20.0% |
| !!! | TAAAATAAACTGTTACTTAC+AGG | - | chr1.1:14032038-14032057 | None:intergenic | 20.0% |
| !!! | TAAGCAATCATAATATTTTC+GGG | - | chr1.1:14031741-14031760 | None:intergenic | 20.0% |
| ! | AAAATGCAAAATGTTAGACA+CGG | - | chr1.1:14030685-14030704 | None:intergenic | 25.0% |
| ! | AATGCTTAAACCAAATGAAA+AGG | - | chr1.1:14032593-14032612 | None:intergenic | 25.0% |
| ! | ACTAACTTTGCAATAAGAAT+AGG | - | chr1.1:14033287-14033306 | None:intergenic | 25.0% |
| ! | ACTCAACTATAAGATATATC+AGG | - | chr1.1:14031630-14031649 | None:intergenic | 25.0% |
| ! | AGAAATCTGCAATAAAATGA+AGG | - | chr1.1:14031944-14031963 | None:intergenic | 25.0% |
| ! | AGTAAGAAATAGAAGTTACT+CGG | - | chr1.1:14031471-14031490 | None:intergenic | 25.0% |
| ! | ATTGGATTTCAATTAGAAGT+TGG | + | chr1.1:14032352-14032371 | MS.gene31802:intron | 25.0% |
| ! | CAATAAAATGAAGGTAACAA+TGG | - | chr1.1:14031935-14031954 | None:intergenic | 25.0% |
| ! | CAATACTTAAGACTTCATTA+CGG | - | chr1.1:14031356-14031375 | None:intergenic | 25.0% |
| ! | CTTGATCAATTACCAAATTA+TGG | + | chr1.1:14031412-14031431 | MS.gene31802:intron | 25.0% |
| ! | GATACCATCAATTACATTAT+GGG | - | chr1.1:14031665-14031684 | None:intergenic | 25.0% |
| ! | GCAATCTTAAATATATCTGA+TGG | - | chr1.1:14031507-14031526 | None:intergenic | 25.0% |
| ! | TATAAAAAGATTCATCCTTC+TGG | - | chr1.1:14030841-14030860 | None:intergenic | 25.0% |
| ! | TGGATAATACTGTTAAGATA+TGG | + | chr1.1:14031538-14031557 | MS.gene31802:CDS | 25.0% |
| !! | AAGCAATCATAATATTTTCG+GGG | - | chr1.1:14031740-14031759 | None:intergenic | 25.0% |
| !! | AATCTTTTTATACAGTAAGC+TGG | + | chr1.1:14030849-14030868 | MS.gene31802:CDS | 25.0% |
| !! | AGATTTTAAATTGACAACAG+TGG | + | chr1.1:14031874-14031893 | MS.gene31802:intron | 25.0% |
| !! | ATCTTTTTATACAGTAAGCT+GGG | + | chr1.1:14030850-14030869 | MS.gene31802:CDS | 25.0% |
| !! | CTTTTTCTTCTTCGTTTATT+AGG | + | chr1.1:14030571-14030590 | MS.gene31802:intron | 25.0% |
| !! | TAACTTCTATTTCTTACTGT+AGG | + | chr1.1:14031473-14031492 | MS.gene31802:intron | 25.0% |
| !! | TAAGTATTGTGAGTGTATTA+TGG | + | chr1.1:14031367-14031386 | MS.gene31802:intron | 25.0% |
| !! | TAGCTTTCATCTTTTCTATA+TGG | - | chr1.1:14031692-14031711 | None:intergenic | 25.0% |
| !! | TCATTTTATTGCAGATTTCT+GGG | + | chr1.1:14031944-14031963 | MS.gene31802:intron | 25.0% |
| !! | TGATTTATAACTGATTCATG+AGG | - | chr1.1:14032421-14032440 | None:intergenic | 25.0% |
| !! | TTCATCTTTTCTATATGGTA+CGG | - | chr1.1:14031687-14031706 | None:intergenic | 25.0% |
| !! | TTCATTTTATTGCAGATTTC+TGG | + | chr1.1:14031943-14031962 | MS.gene31802:intron | 25.0% |
| !! | TTTTCTGTCTAATAATGCAT+TGG | - | chr1.1:14032451-14032470 | None:intergenic | 25.0% |
| !!! | TATTTTTTATGTTGACCAGA+AGG | + | chr1.1:14030823-14030842 | MS.gene31802:intron | 25.0% |
| !!! | TCCGTTTTTTCTTTTTCTTT+TGG | + | chr1.1:14033205-14033224 | MS.gene31802:intron | 25.0% |
| !!! | TTCCTTTTACTGTTTCTATT+TGG | - | chr1.1:14032315-14032334 | None:intergenic | 25.0% |
| AAAGACTGTGTAAACAGTAA+TGG | - | chr1.1:14032286-14032305 | None:intergenic | 30.0% | |
| AACTTTGCAATAAGAATAGG+AGG | - | chr1.1:14033284-14033303 | None:intergenic | 30.0% | |
| AAGAAATAACCTTCCATCAT+GGG | - | chr1.1:14033426-14033445 | None:intergenic | 30.0% | |
| AAGACTGTGTAAACAGTAAT+GGG | - | chr1.1:14032285-14032304 | None:intergenic | 30.0% | |
| AATAAACACCACAATCAAAG+TGG | - | chr1.1:14030728-14030747 | None:intergenic | 30.0% | |
| AATAACTTATAAGGTTGACC+AGG | + | chr1.1:14031260-14031279 | MS.gene31802:intron | 30.0% | |
| ACCAAAGTGATACCAAAAAA+TGG | - | chr1.1:14032484-14032503 | None:intergenic | 30.0% | |
| ACTATTTATCAATGCCTTCA+AGG | + | chr1.1:14030596-14030615 | MS.gene31802:CDS | 30.0% | |
| ATATATCACATTCAGGAACA+GGG | - | chr1.1:14032952-14032971 | None:intergenic | 30.0% | |
| ATCTCCCATAATGTAATTGA+TGG | + | chr1.1:14031658-14031677 | MS.gene31802:intron | 30.0% | |
| ATGAACCATATATCACATTC+AGG | - | chr1.1:14032959-14032978 | None:intergenic | 30.0% | |
| ATGTAGAACAATCATTCACA+TGG | + | chr1.1:14031970-14031989 | MS.gene31802:CDS | 30.0% | |
| CAATTACATTATGGGAGATA+CGG | - | chr1.1:14031657-14031676 | None:intergenic | 30.0% | |
| GAAAATCAAACTCTTTCCAA+CGG | - | chr1.1:14032225-14032244 | None:intergenic | 30.0% | |
| GAATCATGTAAATTTCAGCT+AGG | - | chr1.1:14032263-14032282 | None:intergenic | 30.0% | |
| GAGGTTATGTTAGAATTGAA+TGG | - | chr1.1:14030517-14030536 | None:intergenic | 30.0% | |
| GGATACCATCAATTACATTA+TGG | - | chr1.1:14031666-14031685 | None:intergenic | 30.0% | |
| GGGAATTATTGGAACTTTAT+TGG | + | chr1.1:14032515-14032534 | MS.gene31802:intron | 30.0% | |
| GGTATAATTCGAGTCATTAA+TGG | + | chr1.1:14030920-14030939 | MS.gene31802:CDS | 30.0% | |
| GTAAGAAATAGAAGTTACTC+GGG | - | chr1.1:14031470-14031489 | None:intergenic | 30.0% | |
| GTTAAGATATGGTCTATGAA+GGG | + | chr1.1:14031549-14031568 | MS.gene31802:CDS | 30.0% | |
| TATTGGAACTTTATTGGACT+TGG | + | chr1.1:14032521-14032540 | MS.gene31802:intron | 30.0% | |
| TGCCAAATAGAAACAGTAAA+AGG | + | chr1.1:14032310-14032329 | MS.gene31802:intron | 30.0% | |
| TGGTAATTGATCAAGTCAAA+GGG | - | chr1.1:14031407-14031426 | None:intergenic | 30.0% | |
| TGTTAAGATATGGTCTATGA+AGG | + | chr1.1:14031548-14031567 | MS.gene31802:CDS | 30.0% | |
| TTCTTGTGATTTCCATTTCA+AGG | + | chr1.1:14032985-14033004 | MS.gene31802:CDS | 30.0% | |
| TTGAAAACAACAGCATATAG+AGG | - | chr1.1:14030417-14030436 | None:intergenic | 30.0% | |
| TTGAGTCCTGATTTCATTTA+TGG | - | chr1.1:14031146-14031165 | None:intergenic | 30.0% | |
| ! | AGCAATCATAATATTTTCGG+GGG | - | chr1.1:14031739-14031758 | None:intergenic | 30.0% |
| ! | ATACTTTTGGATGTGATAAC+TGG | - | chr1.1:14031779-14031798 | None:intergenic | 30.0% |
| ! | ATATTTAAGATTGCCAGTTG+TGG | + | chr1.1:14031513-14031532 | MS.gene31802:CDS | 30.0% |
| ! | ATTACGTTGATTGTACTAGA+TGG | + | chr1.1:14032140-14032159 | MS.gene31802:CDS | 30.0% |
| ! | ATTTTGTGGGAAACTTAGAA+GGG | - | chr1.1:14032004-14032023 | None:intergenic | 30.0% |
| ! | CATTTTATTGCAGATTTCTG+GGG | + | chr1.1:14031945-14031964 | MS.gene31802:intron | 30.0% |
| ! | TATTTTGTGGGAAACTTAGA+AGG | - | chr1.1:14032005-14032024 | None:intergenic | 30.0% |
| ! | TTGGTAATTGATCAAGTCAA+AGG | - | chr1.1:14031408-14031427 | None:intergenic | 30.0% |
| !! | ATATTCAAATCACTGACTCA+TGG | - | chr1.1:14032720-14032739 | None:intergenic | 30.0% |
| !! | CTTTTGTAGATGATGATGTA+AGG | + | chr1.1:14030642-14030661 | MS.gene31802:intron | 30.0% |
| !! | TTTGTTAGTTTGGAGTTTTG+TGG | + | chr1.1:14030986-14031005 | MS.gene31802:intron | 30.0% |
| !!! | ACCATTTTTTGGTATCACTT+TGG | + | chr1.1:14032480-14032499 | MS.gene31802:intron | 30.0% |
| !!! | ATTTTGAGATTGACTCTATG+TGG | - | chr1.1:14031831-14031850 | None:intergenic | 30.0% |
| !!! | GTATGTGTTTTGATATTTGC+TGG | + | chr1.1:14031318-14031337 | MS.gene31802:CDS | 30.0% |
| !!! | TGAGGCATTTAGTTTTATGT+CGG | + | chr1.1:14031572-14031591 | MS.gene31802:intron | 30.0% |
| AAAAGTGAAGGAACAATCTC+CGG | + | chr1.1:14032808-14032827 | MS.gene31802:CDS | 35.0% | |
| ATTTATCAATGCCTTCAAGG+AGG | + | chr1.1:14030599-14030618 | MS.gene31802:CDS | 35.0% | |
| CATATATCACATTCAGGAAC+AGG | - | chr1.1:14032953-14032972 | None:intergenic | 35.0% | |
| CTCAATCAAAATCTCCAATC+AGG | + | chr1.1:14033387-14033406 | MS.gene31802:CDS | 35.0% | |
| CTGTTCCTGAATGTGATATA+TGG | + | chr1.1:14032951-14032970 | MS.gene31802:CDS | 35.0% | |
| GAAAAGATGAAAGCTATACC+AGG | + | chr1.1:14031696-14031715 | MS.gene31802:intron | 35.0% | |
| GAAGAAATAACCTTCCATCA+TGG | - | chr1.1:14033427-14033446 | None:intergenic | 35.0% | |
| GGATAAACAAAAGCAACCAA+TGG | - | chr1.1:14031609-14031628 | None:intergenic | 35.0% | |
| GGTAATTGATCAAGTCAAAG+GGG | - | chr1.1:14031406-14031425 | None:intergenic | 35.0% | |
| GTAAGTGAAATAACAGAGAG+AGG | - | chr1.1:14031215-14031234 | None:intergenic | 35.0% | |
| GTTGATTGTACTAGATGGTT+GGG | + | chr1.1:14032145-14032164 | MS.gene31802:CDS | 35.0% | |
| TCGGTAACTTGAATTCTTCA+AGG | + | chr1.1:14030346-14030365 | MS.gene31802:CDS | 35.0% | |
| TGAACACCCAAACAATGAAA+AGG | - | chr1.1:14032902-14032921 | None:intergenic | 35.0% | |
| TGACCATGAAATTGTCTTGT+GGG | + | chr1.1:14032781-14032800 | MS.gene31802:CDS | 35.0% | |
| TGGCCAAGTTATCACTAAAA+TGG | - | chr1.1:14032700-14032719 | None:intergenic | 35.0% | |
| TTCAATTAGAAGTTGGAACG+TGG | + | chr1.1:14032359-14032378 | MS.gene31802:intron | 35.0% | |
| TTGACCATGAAATTGTCTTG+TGG | + | chr1.1:14032780-14032799 | MS.gene31802:CDS | 35.0% | |
| TTGATTGTACTAGATGGTTG+GGG | + | chr1.1:14032146-14032165 | MS.gene31802:CDS | 35.0% | |
| TTGGAAATGGTATGCTTCAA+TGG | + | chr1.1:14032389-14032408 | MS.gene31802:intron | 35.0% | |
| TTTCATTGTTTGGGTGTTCA+GGG | + | chr1.1:14032902-14032921 | MS.gene31802:intron | 35.0% | |
| ! | ACGTGGTTTAAGTTTGGAAA+TGG | + | chr1.1:14032376-14032395 | MS.gene31802:intron | 35.0% |
| ! | AGGAAACTGCACATATTTTG+TGG | - | chr1.1:14032018-14032037 | None:intergenic | 35.0% |
| ! | ATTTTATTGAAGGGTTGCAG+AGG | - | chr1.1:14032625-14032644 | None:intergenic | 35.0% |
| ! | CTTCAGCCTTTTCATTGTTT+GGG | + | chr1.1:14032893-14032912 | MS.gene31802:intron | 35.0% |
| ! | GAAAATCATGTGACTTTTCC+TGG | - | chr1.1:14031717-14031736 | None:intergenic | 35.0% |
| ! | GGAAACTGCACATATTTTGT+GGG | - | chr1.1:14032017-14032036 | None:intergenic | 35.0% |
| ! | GGAAGGGAAGATTTTTCTTT+GGG | + | chr1.1:14033244-14033263 | MS.gene31802:CDS | 35.0% |
| ! | TTTTCATTGTTTGGGTGTTC+AGG | + | chr1.1:14032901-14032920 | MS.gene31802:intron | 35.0% |
| !! | CTTTTGAGTGCAAAGAAAAG+AGG | - | chr1.1:14030536-14030555 | None:intergenic | 35.0% |
| !! | GGTCCATTTTAGTGATAACT+TGG | + | chr1.1:14032694-14032713 | MS.gene31802:intron | 35.0% |
| AAACACCACAATCAAAGTGG+TGG | - | chr1.1:14030725-14030744 | None:intergenic | 40.0% | |
| AAAGTGAAGGAACAATCTCC+GGG | + | chr1.1:14032809-14032828 | MS.gene31802:CDS | 40.0% | |
| AACAAAACTCTGTAGGGAGA+AGG | - | chr1.1:14031110-14031129 | None:intergenic | 40.0% | |
| AAGGCATGTGCAATAGGTAA+GGG | + | chr1.1:14033004-14033023 | MS.gene31802:intron | 40.0% | |
| ACAAAACTCTGTAGGGAGAA+GGG | - | chr1.1:14031109-14031128 | None:intergenic | 40.0% | |
| AGTATTATCCATGCCACAAC+TGG | - | chr1.1:14031529-14031548 | None:intergenic | 40.0% | |
| AGTTGCAAGAGAGAAAGTTG+AGG | + | chr1.1:14032663-14032682 | MS.gene31802:intron | 40.0% | |
| ATGGCCAACAAAACTCTGTA+GGG | - | chr1.1:14031116-14031135 | None:intergenic | 40.0% | |
| CAATTTCATGGTCAACACTC+TGG | - | chr1.1:14032775-14032794 | None:intergenic | 40.0% | |
| CATATACCTCTTGTCACTAC+CGG | - | chr1.1:14033093-14033112 | None:intergenic | 40.0% | |
| CATTTCAAGGCATGTGCAAT+AGG | + | chr1.1:14032998-14033017 | MS.gene31802:CDS | 40.0% | |
| CTATTGCACATGCCTTGAAA+TGG | - | chr1.1:14033000-14033019 | None:intergenic | 40.0% | |
| GCTGAGTACATGGGAATTAT+TGG | + | chr1.1:14032504-14032523 | MS.gene31802:intron | 40.0% | |
| GGGACTCCATAAATGAAATC+AGG | + | chr1.1:14031137-14031156 | MS.gene31802:CDS | 40.0% | |
| GTTCCCACAAGACAATTTCA+TGG | - | chr1.1:14032787-14032806 | None:intergenic | 40.0% | |
| TAGCGATGAGAAGTTACACA+AGG | + | chr1.1:14030943-14030962 | MS.gene31802:CDS | 40.0% | |
| TCTAACGTACAGCATTAGTC+CGG | + | chr1.1:14033071-14033090 | MS.gene31802:intron | 40.0% | |
| TGATTGTACTAGATGGTTGG+GGG | + | chr1.1:14032147-14032166 | MS.gene31802:CDS | 40.0% | |
| TTTCATTTATGGAGTCCCCA+TGG | - | chr1.1:14031135-14031154 | None:intergenic | 40.0% | |
| ! | AGAGAGAAAGTTGAGGCATT+AGG | + | chr1.1:14032670-14032689 | MS.gene31802:intron | 40.0% |
| ! | ATTTTATGTTGCTGCGACGA+TGG | + | chr1.1:14033528-14033547 | MS.gene31802:CDS | 40.0% |
| ! | CGTTGATTGTACTAGATGGT+TGG | + | chr1.1:14032144-14032163 | MS.gene31802:CDS | 40.0% |
| ! | CTTTTTCTTTTGGATCTGCC+AGG | + | chr1.1:14033215-14033234 | MS.gene31802:intron | 40.0% |
| ! | GCTTCAGCCTTTTCATTGTT+TGG | + | chr1.1:14032892-14032911 | MS.gene31802:intron | 40.0% |
| ! | GGAGATTGTTCCTTCACTTT+TGG | - | chr1.1:14032809-14032828 | None:intergenic | 40.0% |
| ! | GGGAAGGGAAGATTTTTCTT+TGG | + | chr1.1:14033243-14033262 | MS.gene31802:CDS | 40.0% |
| ! | GTTGGAACGTGGTTTAAGTT+TGG | + | chr1.1:14032370-14032389 | MS.gene31802:intron | 40.0% |
| !! | GTTTTGATATTTGCTGGAGC+TGG | + | chr1.1:14031324-14031343 | MS.gene31802:CDS | 40.0% |
| !! | TTCTCCCTACAGAGTTTTGT+TGG | + | chr1.1:14031109-14031128 | MS.gene31802:intron | 40.0% |
| !!! | TACAGAGTTTTGTTGGCCAT+GGG | + | chr1.1:14031116-14031135 | MS.gene31802:intron | 40.0% |
| AAATCAGGACTCAAGCGATG+AGG | + | chr1.1:14031152-14031171 | MS.gene31802:CDS | 45.0% | |
| AAGTGAAGGAACAATCTCCG+GGG | + | chr1.1:14032810-14032829 | MS.gene31802:CDS | 45.0% | |
| AGAGTGAGTTACCTTCAGGT+TGG | + | chr1.1:14033358-14033377 | MS.gene31802:intron | 45.0% | |
| AGCAAACACTCACCTTTGAG+AGG | - | chr1.1:14032180-14032199 | None:intergenic | 45.0% | |
| ATTAGTCCGGTAGTGACAAG+AGG | + | chr1.1:14033084-14033103 | MS.gene31802:intron | 45.0% | |
| CAAGGCATGTGCAATAGGTA+AGG | + | chr1.1:14033003-14033022 | MS.gene31802:intron | 45.0% | |
| CAGCAATAACTCCTCCTTGA+AGG | - | chr1.1:14030613-14030632 | None:intergenic | 45.0% | |
| CATGGCCAACAAAACTCTGT+AGG | - | chr1.1:14031117-14031136 | None:intergenic | 45.0% | |
| CGGTTATGGAATGTTCACAC+TGG | + | chr1.1:14031294-14031313 | MS.gene31802:CDS | 45.0% | |
| CTAGCAGATATCACAAGTGC+TGG | - | chr1.1:14031178-14031197 | None:intergenic | 45.0% | |
| CTCTACCACCACTTTGATTG+TGG | + | chr1.1:14030717-14030736 | MS.gene31802:intron | 45.0% | |
| CTTGTGGGAACCAAAAGTGA+AGG | + | chr1.1:14032796-14032815 | MS.gene31802:CDS | 45.0% | |
| GATATGGTCTATGAAGGGTG+AGG | + | chr1.1:14031554-14031573 | MS.gene31802:intron | 45.0% | |
| GCTAAGAGTGAGTTACCTTC+AGG | + | chr1.1:14033354-14033373 | MS.gene31802:intron | 45.0% | |
| GGGGGAATTTATCCTCTCAA+AGG | + | chr1.1:14032165-14032184 | MS.gene31802:CDS | 45.0% | |
| GTCGGCTGCTATTATTCCAT+TGG | + | chr1.1:14031590-14031609 | MS.gene31802:intron | 45.0% | |
| GTTAGACACGGAAGAGAGTA+GGG | - | chr1.1:14030673-14030692 | None:intergenic | 45.0% | |
| TAAGATTGCCAGTTGTGGCA+TGG | + | chr1.1:14031518-14031537 | MS.gene31802:CDS | 45.0% | |
| TAAGGTTGACCAGGATGAGT+CGG | + | chr1.1:14031269-14031288 | MS.gene31802:intron | 45.0% | |
| TAGTTTGGGAACTGAACCAG+TGG | + | chr1.1:14030323-14030342 | MS.gene31802:CDS | 45.0% | |
| TGGCGAAAACGTTGAAGTAG+CGG | - | chr1.1:14030452-14030471 | None:intergenic | 45.0% | |
| TGTTAGACACGGAAGAGAGT+AGG | - | chr1.1:14030674-14030693 | None:intergenic | 45.0% | |
| TTGAGTATGCACCAACCTGA+AGG | - | chr1.1:14033372-14033391 | None:intergenic | 45.0% | |
| ! | GAATTCAAGTTACCGACCAC+TGG | - | chr1.1:14030342-14030361 | None:intergenic | 45.0% |
| ! | GAGAAAGTTGAGGCATTAGG+TGG | + | chr1.1:14032673-14032692 | MS.gene31802:intron | 45.0% |
| ! | TTCAACGTTTTCGCCACAGT+TGG | + | chr1.1:14030456-14030475 | MS.gene31802:CDS | 45.0% |
| ! | TTGATATTTGCTGGAGCTGG+AGG | + | chr1.1:14031327-14031346 | MS.gene31802:CDS | 45.0% |
| !! | CACTTTGGTGCTGAGTACAT+GGG | + | chr1.1:14032495-14032514 | MS.gene31802:intron | 45.0% |
| !! | TAGTTCTAACTAACCTCCCC+CGG | - | chr1.1:14032830-14032849 | None:intergenic | 45.0% |
| !! | TCACTTTGGTGCTGAGTACA+TGG | + | chr1.1:14032494-14032513 | MS.gene31802:intron | 45.0% |
| !!! | ACAGAGTTTTGTTGGCCATG+GGG | + | chr1.1:14031117-14031136 | MS.gene31802:intron | 45.0% |
| !!! | CTACAGAGTTTTGTTGGCCA+TGG | + | chr1.1:14031115-14031134 | MS.gene31802:intron | 45.0% |
| AACGGCAAGTAGACTGACAC+TGG | - | chr1.1:14032207-14032226 | None:intergenic | 50.0% | |
| ACGATGGAACAATATGGCGC+TGG | + | chr1.1:14033544-14033563 | MS.gene31802:CDS | 50.0% | |
| AGCTGGGCATGCAATACCAA+TGG | + | chr1.1:14030866-14030885 | MS.gene31802:CDS | 50.0% | |
| AGTGAAGGAACAATCTCCGG+GGG | + | chr1.1:14032811-14032830 | MS.gene31802:CDS | 50.0% | |
| AGTGTCAGTCTACTTGCCGT+TGG | + | chr1.1:14032206-14032225 | MS.gene31802:intron | 50.0% | |
| CAAACTGCTCTGTCCCATGA+TGG | + | chr1.1:14033410-14033429 | MS.gene31802:CDS | 50.0% | |
| CGATGGAACAATATGGCGCT+GGG | + | chr1.1:14033545-14033564 | MS.gene31802:CDS | 50.0% | |
| CTGGGCATGCAATACCAATG+GGG | + | chr1.1:14030868-14030887 | MS.gene31802:CDS | 50.0% | |
| GACAGAGCAGTTTGCCTGAT+TGG | - | chr1.1:14033404-14033423 | None:intergenic | 50.0% | |
| GCTGCGACGATGGAACAATA+TGG | + | chr1.1:14033538-14033557 | MS.gene31802:CDS | 50.0% | |
| GCTGGGCATGCAATACCAAT+GGG | + | chr1.1:14030867-14030886 | MS.gene31802:CDS | 50.0% | |
| GGCGAAAACGTTGAAGTAGC+GGG | - | chr1.1:14030451-14030470 | None:intergenic | 50.0% | |
| TTGACCAGGATGAGTCGGTT+CGG | + | chr1.1:14031274-14031293 | MS.gene31802:intron | 50.0% | |
| TTGGGAACTGAACCAGTGGT+CGG | + | chr1.1:14030327-14030346 | MS.gene31802:CDS | 50.0% | |
| TTTGGATCTGCCAGGCAACA+GGG | + | chr1.1:14033223-14033242 | MS.gene31802:intron | 50.0% | |
| ! | AACGTTTTCGCCACAGTTGG+TGG | + | chr1.1:14030459-14030478 | MS.gene31802:CDS | 50.0% |
| ! | ATAACCGAACCGACTCATCC+TGG | - | chr1.1:14031281-14031300 | None:intergenic | 50.0% |
| ! | TTTTGGATCTGCCAGGCAAC+AGG | + | chr1.1:14033222-14033241 | MS.gene31802:intron | 50.0% |
| !! | AGGATGAGTCGGTTCGGTTA+TGG | + | chr1.1:14031280-14031299 | MS.gene31802:intron | 50.0% |
| !! | GGGAGAAGGGTGTCATTTCA+AGG | - | chr1.1:14031096-14031115 | None:intergenic | 50.0% |
| AACCCGATTGCCACCAACTG+TGG | - | chr1.1:14030472-14030491 | None:intergenic | 55.0% | |
| AGTCACCAATCGCCTCCAAG+AGG | + | chr1.1:14030383-14030402 | MS.gene31802:CDS | 55.0% | |
| ATAGAGGACGCTTGCCCTCT+TGG | - | chr1.1:14030401-14030420 | None:intergenic | 55.0% | |
| ATCTGCCAGGCAACAGGGAA+GGG | + | chr1.1:14033228-14033247 | MS.gene31802:intron | 55.0% | |
| ATCTTCCCTTCCCTGTTGCC+TGG | - | chr1.1:14033236-14033255 | None:intergenic | 55.0% | |
| GTCACCAATCGCCTCCAAGA+GGG | + | chr1.1:14030384-14030403 | MS.gene31802:CDS | 55.0% | |
| ! | CTGCTCTGTCCCATGATGGA+AGG | + | chr1.1:14033414-14033433 | MS.gene31802:CDS | 55.0% |
| !! | TCGCCACAGTTGGTGGCAAT+CGG | + | chr1.1:14030466-14030485 | MS.gene31802:CDS | 55.0% |
| ACTCCTCCAGCCACAGCAAG+CGG | - | chr1.1:14030896-14030915 | None:intergenic | 60.0% | |
| CTTGCCCTCTTGGAGGCGAT+TGG | - | chr1.1:14030391-14030410 | None:intergenic | 60.0% | |
| GAAGGAACAATCTCCGGGGG+AGG | + | chr1.1:14032814-14032833 | MS.gene31802:CDS | 60.0% | |
| GATCTGCCAGGCAACAGGGA+AGG | + | chr1.1:14033227-14033246 | MS.gene31802:intron | 60.0% | |
| GCTGTGGCTGGAGGAGTCAA+TGG | + | chr1.1:14030899-14030918 | MS.gene31802:CDS | 60.0% | |
| !! | CGCCACAGTTGGTGGCAATC+GGG | + | chr1.1:14030467-14030486 | MS.gene31802:CDS | 60.0% |
| CACAGCAAGCGGAGCCCCAT+TGG | - | chr1.1:14030885-14030904 | None:intergenic | 65.0% | |
| GAGGACGCTTGCCCTCTTGG+AGG | - | chr1.1:14030398-14030417 | None:intergenic | 65.0% | |
| ! | CAATGGGGCTCCGCTTGCTG+TGG | + | chr1.1:14030883-14030902 | MS.gene31802:CDS | 65.0% |
| !! | GCTCCGCTTGCTGTGGCTGG+AGG | + | chr1.1:14030890-14030909 | MS.gene31802:CDS | 70.0% |
| !! | GGGGCTCCGCTTGCTGTGGC+TGG | + | chr1.1:14030887-14030906 | MS.gene31802:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 14030312 | 14033590 | 14030312 | ID=MS.gene31802 |
| chr1.1 | mRNA | 14030312 | 14033590 | 14030312 | ID=MS.gene31802.t1;Parent=MS.gene31802 |
| chr1.1 | exon | 14030312 | 14030488 | 14030312 | ID=MS.gene31802.t1.exon1;Parent=MS.gene31802.t1 |
| chr1.1 | CDS | 14030312 | 14030488 | 14030312 | ID=cds.MS.gene31802.t1;Parent=MS.gene31802.t1 |
| chr1.1 | exon | 14030593 | 14030658 | 14030593 | ID=MS.gene31802.t1.exon2;Parent=MS.gene31802.t1 |
| chr1.1 | CDS | 14030593 | 14030658 | 14030593 | ID=cds.MS.gene31802.t1;Parent=MS.gene31802.t1 |
| chr1.1 | exon | 14030842 | 14030964 | 14030842 | ID=MS.gene31802.t1.exon3;Parent=MS.gene31802.t1 |
| chr1.1 | CDS | 14030842 | 14030964 | 14030842 | ID=cds.MS.gene31802.t1;Parent=MS.gene31802.t1 |
| chr1.1 | exon | 14031121 | 14031201 | 14031121 | ID=MS.gene31802.t1.exon4;Parent=MS.gene31802.t1 |
| chr1.1 | CDS | 14031121 | 14031201 | 14031121 | ID=cds.MS.gene31802.t1;Parent=MS.gene31802.t1 |
| chr1.1 | exon | 14031282 | 14031374 | 14031282 | ID=MS.gene31802.t1.exon5;Parent=MS.gene31802.t1 |
| chr1.1 | CDS | 14031282 | 14031374 | 14031282 | ID=cds.MS.gene31802.t1;Parent=MS.gene31802.t1 |
| chr1.1 | exon | 14031495 | 14031570 | 14031495 | ID=MS.gene31802.t1.exon6;Parent=MS.gene31802.t1 |
| chr1.1 | CDS | 14031495 | 14031570 | 14031495 | ID=cds.MS.gene31802.t1;Parent=MS.gene31802.t1 |
| chr1.1 | exon | 14031958 | 14032037 | 14031958 | ID=MS.gene31802.t1.exon7;Parent=MS.gene31802.t1 |
| chr1.1 | CDS | 14031958 | 14032037 | 14031958 | ID=cds.MS.gene31802.t1;Parent=MS.gene31802.t1 |
| chr1.1 | exon | 14032115 | 14032186 | 14032115 | ID=MS.gene31802.t1.exon8;Parent=MS.gene31802.t1 |
| chr1.1 | CDS | 14032115 | 14032186 | 14032115 | ID=cds.MS.gene31802.t1;Parent=MS.gene31802.t1 |
| chr1.1 | exon | 14032776 | 14032835 | 14032776 | ID=MS.gene31802.t1.exon9;Parent=MS.gene31802.t1 |
| chr1.1 | CDS | 14032776 | 14032835 | 14032776 | ID=cds.MS.gene31802.t1;Parent=MS.gene31802.t1 |
| chr1.1 | exon | 14032923 | 14033019 | 14032923 | ID=MS.gene31802.t1.exon10;Parent=MS.gene31802.t1 |
| chr1.1 | CDS | 14032923 | 14033019 | 14032923 | ID=cds.MS.gene31802.t1;Parent=MS.gene31802.t1 |
| chr1.1 | exon | 14033237 | 14033300 | 14033237 | ID=MS.gene31802.t1.exon11;Parent=MS.gene31802.t1 |
| chr1.1 | CDS | 14033237 | 14033300 | 14033237 | ID=cds.MS.gene31802.t1;Parent=MS.gene31802.t1 |
| chr1.1 | exon | 14033376 | 14033435 | 14033376 | ID=MS.gene31802.t1.exon12;Parent=MS.gene31802.t1 |
| chr1.1 | CDS | 14033376 | 14033435 | 14033376 | ID=cds.MS.gene31802.t1;Parent=MS.gene31802.t1 |
| chr1.1 | exon | 14033524 | 14033590 | 14033524 | ID=MS.gene31802.t1.exon13;Parent=MS.gene31802.t1 |
| chr1.1 | CDS | 14033524 | 14033590 | 14033524 | ID=cds.MS.gene31802.t1;Parent=MS.gene31802.t1 |
| Gene Sequence |
| Protein sequence |
