Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81779.t1 | XP_013468014.1 | 96.6 | 349 | 12 | 0 | 1 | 349 | 167 | 515 | 9.60E-164 | 586.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81779.t1 | Q9SR71 | 56.9 | 343 | 135 | 7 | 6 | 343 | 200 | 534 | 2.2e-79 | 297.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81779.t1 | A0A072VK96 | 96.6 | 349 | 12 | 0 | 1 | 349 | 167 | 515 | 6.9e-164 | 586.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene81779 | MS.gene054117 | PPI |
| MS.gene81779 | MS.gene046808 | PPI |
| MS.gene81779 | MS.gene044460 | PPI |
| MS.gene81779 | MS.gene063505 | PPI |
| MS.gene81779 | MS.gene32361 | PPI |
| MS.gene81779 | MS.gene31802 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81779.t1 | MTR_1g060410 | 97.708 | 349 | 8 | 0 | 1 | 349 | 167 | 515 | 0.0 | 680 |
| MS.gene81779.t1 | MTR_1g060410 | 97.738 | 221 | 5 | 0 | 1 | 221 | 167 | 387 | 7.78e-145 | 415 |
| MS.gene81779.t1 | MTR_8g020480 | 48.026 | 152 | 67 | 2 | 164 | 310 | 372 | 516 | 3.30e-39 | 146 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81779.t1 | AT3G10070 | 53.582 | 349 | 147 | 7 | 6 | 348 | 200 | 539 | 6.44e-101 | 308 |
| MS.gene81779.t1 | AT1G17440 | 41.463 | 164 | 79 | 4 | 164 | 322 | 486 | 637 | 3.81e-31 | 124 |
| MS.gene81779.t1 | AT1G17440 | 41.463 | 164 | 79 | 4 | 164 | 322 | 486 | 637 | 3.81e-31 | 124 |
Find 0 sgRNAs with CRISPR-Local
Find 419 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAAAAACAG+TGG | - | 11221:6306-6325 | MS.gene81779:intron | 10.0% |
| !! | AAAATTATCATTCAATTAAT+TGG | + | 11221:4051-4070 | MS.gene81779:intergenic | 10.0% |
| !! | GAAATAAAGAAATTAATATA+AGG | - | 11221:5216-5235 | MS.gene81779:intron | 10.0% |
| !! | TTAATCTATAAATAAATCTA+TGG | - | 11221:4334-4353 | MS.gene81779:intron | 10.0% |
| !!! | ACTTAAATACAAATATTTTT+TGG | - | 11221:4713-4732 | MS.gene81779:intron | 10.0% |
| !!! | AGTTATGATTTTAAAATTTT+GGG | - | 11221:5950-5969 | MS.gene81779:intron | 10.0% |
| !!! | ATTAAATTAAGTTTTTTTGT+TGG | - | 11221:4912-4931 | MS.gene81779:intron | 10.0% |
| !!! | ATTTTTAGTTGTTTTTAAAT+TGG | + | 11221:4894-4913 | MS.gene81779:intergenic | 10.0% |
| !!! | TAGTTATGATTTTAAAATTT+TGG | - | 11221:5949-5968 | MS.gene81779:intron | 10.0% |
| !!! | TATCTTTTAAATAGATAATT+AGG | - | 11221:7798-7817 | MS.gene81779:CDS | 10.0% |
| !!! | TTTTTTTTTTTTTGTTATCT+TGG | + | 11221:6299-6318 | MS.gene81779:intergenic | 10.0% |
| !! | AAAAAAAGAAGAAAACAAAA+AGG | + | 11221:7733-7752 | MS.gene81779:intergenic | 15.0% |
| !! | AAAAATATAAATGTAAACAC+AGG | + | 11221:6894-6913 | MS.gene81779:intergenic | 15.0% |
| !! | AAAAATATAATCTGTGAAAA+GGG | + | 11221:7938-7957 | MS.gene81779:intergenic | 15.0% |
| !! | AATAGTGAAATGTAATAAAA+TGG | + | 11221:4107-4126 | MS.gene81779:intergenic | 15.0% |
| !! | ACTAAATGATAAAATGAAAA+CGG | + | 11221:6436-6455 | MS.gene81779:intergenic | 15.0% |
| !! | ATAGTGAAATGTAATAAAAT+GGG | + | 11221:4106-4125 | MS.gene81779:intergenic | 15.0% |
| !! | TAAGATAACAATTTACAATT+GGG | - | 11221:4954-4973 | MS.gene81779:intron | 15.0% |
| !! | TAATTAAAACTTAACCATAA+AGG | + | 11221:8059-8078 | MS.gene81779:intergenic | 15.0% |
| !! | TAATTTGAATTTGAATCTAT+TGG | - | 11221:4638-4657 | MS.gene81779:intron | 15.0% |
| !! | TACAAAAGAAAATAGTTTAT+TGG | + | 11221:7638-7657 | MS.gene81779:intergenic | 15.0% |
| !! | TACTATTTAAAAACATTGTT+GGG | - | 11221:8314-8333 | MS.gene81779:intron | 15.0% |
| !! | TTAAGATAACAATTTACAAT+TGG | - | 11221:4953-4972 | MS.gene81779:intron | 15.0% |
| !! | TTAATTGGATATTTATACAA+TGG | + | 11221:4036-4055 | MS.gene81779:intergenic | 15.0% |
| !! | TTACTATTTAAAAACATTGT+TGG | - | 11221:8313-8332 | MS.gene81779:intron | 15.0% |
| !!! | AATTCTAAAGAATATTAGTT+TGG | - | 11221:7386-7405 | MS.gene81779:intron | 15.0% |
| !!! | ATATTTTTTGGTAGTTTTAA+TGG | - | 11221:4725-4744 | MS.gene81779:intron | 15.0% |
| !!! | ATCACATTTCTATTTTTTTA+TGG | - | 11221:4501-4520 | MS.gene81779:intron | 15.0% |
| !!! | ATGGTTAAGTTTTAATTAAA+TGG | - | 11221:8061-8080 | MS.gene81779:intron | 15.0% |
| !!! | ATTTTTAGGAGAAAAAAAAA+AGG | + | 11221:5567-5586 | MS.gene81779:intergenic | 15.0% |
| !!! | TTGGTTATATTATATCTTTT+AGG | - | 11221:8201-8220 | MS.gene81779:intron | 15.0% |
| !!! | TTTTCTTTTTAGAGAAAAAT+TGG | - | 11221:7954-7973 | MS.gene81779:intron | 15.0% |
| !!! | TTTTTAGGAGAAAAAAAAAA+GGG | + | 11221:5566-5585 | MS.gene81779:intergenic | 15.0% |
| !! | AAATGAAACGATATCAAAAT+AGG | - | 11221:3867-3886 | MS.gene81779:intron | 20.0% |
| !! | AAGATAAAAAATATACACCA+AGG | - | 11221:6242-6261 | MS.gene81779:intron | 20.0% |
| !! | ACTGAAAATGAAGAAATAAA+AGG | - | 11221:5194-5213 | MS.gene81779:intron | 20.0% |
| !! | AGATAAAAAATATACACCAA+GGG | - | 11221:6243-6262 | MS.gene81779:intron | 20.0% |
| !! | AGCATAATATAAACATATAC+CGG | - | 11221:8230-8249 | MS.gene81779:intron | 20.0% |
| !! | ATGATAAGCATTTATGTTAT+AGG | - | 11221:2980-2999 | MS.gene81779:intron | 20.0% |
| !! | ATTAGAAAATTCTGATAGTT+TGG | + | 11221:6515-6534 | MS.gene81779:intergenic | 20.0% |
| !! | ATTATACTTTCAGTATATTG+TGG | + | 11221:4537-4556 | MS.gene81779:intergenic | 20.0% |
| !! | CTATAAATAAATCTATGGAA+GGG | - | 11221:4339-4358 | MS.gene81779:intron | 20.0% |
| !! | GAAAAATATAATCTGTGAAA+AGG | + | 11221:7939-7958 | MS.gene81779:intergenic | 20.0% |
| !! | GAAAATAGTTTATTGGAAAT+TGG | + | 11221:7631-7650 | MS.gene81779:intergenic | 20.0% |
| !! | GAAGAAAATATAAACAAACT+AGG | + | 11221:3130-3149 | MS.gene81779:intergenic | 20.0% |
| !! | TAAATTCTTACATGTCTAAT+GGG | + | 11221:4198-4217 | MS.gene81779:intergenic | 20.0% |
| !! | TCAATATGAAAAATAGAAAG+CGG | - | 11221:5262-5281 | MS.gene81779:intron | 20.0% |
| !! | TCTAGCTAAAATTAACTAAA+TGG | - | 11221:5758-5777 | MS.gene81779:intron | 20.0% |
| !! | TCTATAAATAAATCTATGGA+AGG | - | 11221:4338-4357 | MS.gene81779:intron | 20.0% |
| !! | TGGTAAAATACCTATTTATT+GGG | - | 11221:5489-5508 | MS.gene81779:intron | 20.0% |
| !! | TTAATCTATTAAACTTCAGA+AGG | - | 11221:6001-6020 | MS.gene81779:intron | 20.0% |
| !! | TTTAAATAGATAATTAGGTC+TGG | - | 11221:7803-7822 | MS.gene81779:CDS | 20.0% |
| !! | TTTGTTAAATAAAACATAGG+TGG | - | 11221:3717-3736 | MS.gene81779:intron | 20.0% |
| !!! | ATATTTTTTATCTTAACCCA+GGG | + | 11221:6236-6255 | MS.gene81779:intergenic | 20.0% |
| !!! | ATCCTTTATTATTTTGAAAC+GGG | - | 11221:7101-7120 | MS.gene81779:intron | 20.0% |
| !!! | ATTTTAAACAATCCAAACAA+TGG | + | 11221:3894-3913 | MS.gene81779:intergenic | 20.0% |
| !!! | CAGTGATTTAATTTAAAACA+TGG | - | 11221:3824-3843 | MS.gene81779:intron | 20.0% |
| !!! | CATCCTTTATTATTTTGAAA+CGG | - | 11221:7100-7119 | MS.gene81779:intron | 20.0% |
| !!! | CGTTTTGTTAAATAAAACAT+AGG | - | 11221:3714-3733 | MS.gene81779:intron | 20.0% |
| !!! | CTACTTTCTTTTAAATATCA+TGG | - | 11221:6734-6753 | MS.gene81779:intron | 20.0% |
| !!! | TAAAATAGGTTGAAATGAAA+TGG | - | 11221:3908-3927 | MS.gene81779:intron | 20.0% |
| !!! | TACTTATTTCTGCTATTTTA+GGG | + | 11221:4866-4885 | MS.gene81779:intergenic | 20.0% |
| !!! | TATATTTTTTATCTTAACCC+AGG | + | 11221:6237-6256 | MS.gene81779:intergenic | 20.0% |
| !!! | TCTTTTGAATTTCATATTCT+TGG | - | 11221:8091-8110 | MS.gene81779:intron | 20.0% |
| !!! | TGATTTAATTTAAAACATGG+AGG | - | 11221:3827-3846 | MS.gene81779:intron | 20.0% |
| !!! | TTACTTATTTCTGCTATTTT+AGG | + | 11221:4867-4886 | MS.gene81779:intergenic | 20.0% |
| !!! | TTGTTTGGATTGTTTAAAAT+AGG | - | 11221:3894-3913 | MS.gene81779:intron | 20.0% |
| !!! | TTTCTTTTAAATATCATGGA+CGG | - | 11221:6738-6757 | MS.gene81779:intron | 20.0% |
| !!! | TTTTAGGAGAAAAAAAAAAG+GGG | + | 11221:5565-5584 | MS.gene81779:intergenic | 20.0% |
| !!! | TTTTAGGGTGAATATATATT+AGG | + | 11221:4851-4870 | MS.gene81779:intergenic | 20.0% |
| !!! | TTTTCATAATGAAGTGTTTT+AGG | + | 11221:6697-6716 | MS.gene81779:intergenic | 20.0% |
| ! | AAATGCAGATATAGAAGAAT+CGG | - | 11221:3583-3602 | MS.gene81779:intron | 25.0% |
| ! | AAATTCTTACATGTCTAATG+GGG | + | 11221:4197-4216 | MS.gene81779:intergenic | 25.0% |
| ! | AACCCGTTTCAAAATAATAA+AGG | + | 11221:7106-7125 | MS.gene81779:intergenic | 25.0% |
| ! | AAGAAGAAAACAAAAAGGAT+CGG | + | 11221:7728-7747 | MS.gene81779:intergenic | 25.0% |
| ! | AATATAACCAAGACAAAGAA+AGG | + | 11221:8192-8211 | MS.gene81779:intergenic | 25.0% |
| ! | ACATGTAAGAATTTAGATGA+CGG | - | 11221:4203-4222 | MS.gene81779:intron | 25.0% |
| ! | ATACTCATTCAAATTGTGTT+TGG | - | 11221:6467-6486 | MS.gene81779:intron | 25.0% |
| ! | ATAGATTAATGCAAATTACG+AGG | + | 11221:4323-4342 | MS.gene81779:intergenic | 25.0% |
| ! | ATAGTTTGGATTGATATACT+CGG | + | 11221:6501-6520 | MS.gene81779:intergenic | 25.0% |
| ! | CTAAATTCTTACATGTCTAA+TGG | + | 11221:4199-4218 | MS.gene81779:intergenic | 25.0% |
| ! | GAAGAAAATCAAACAAAACT+TGG | + | 11221:7488-7507 | MS.gene81779:intergenic | 25.0% |
| ! | GAGGATTATTATTTGAAAAG+AGG | + | 11221:7706-7725 | MS.gene81779:intergenic | 25.0% |
| ! | GATTAAAAACTACAGAAAAC+CGG | - | 11221:8009-8028 | MS.gene81779:intron | 25.0% |
| ! | GCTAAAATTAACTAAATGGT+AGG | - | 11221:5762-5781 | MS.gene81779:intron | 25.0% |
| ! | GGTAAAATACCTATTTATTG+GGG | - | 11221:5490-5509 | MS.gene81779:intron | 25.0% |
| ! | GGTATATGTTTATATTATGC+TGG | + | 11221:8231-8250 | MS.gene81779:intergenic | 25.0% |
| ! | GGTTATAGCATAATAACATT+AGG | + | 11221:4576-4595 | MS.gene81779:intergenic | 25.0% |
| ! | GTGGTAAAATACCTATTTAT+TGG | - | 11221:5488-5507 | MS.gene81779:intron | 25.0% |
| ! | GTTATTTGTTTATCTTGGTT+TGG | - | 11221:8376-8395 | MS.gene81779:intron | 25.0% |
| ! | TACTAGAATTAAACCCATTT+CGG | - | 11221:5515-5534 | MS.gene81779:intron | 25.0% |
| ! | TGAAATGTAATAAAATGGGA+TGG | + | 11221:4102-4121 | MS.gene81779:intergenic | 25.0% |
| ! | TGTGTAATTTATGTGTGTAA+GGG | - | 11221:2767-2786 | MS.gene81779:intron | 25.0% |
| ! | TTAAATTGTTCATCCAAACA+GGG | - | 11221:3006-3025 | MS.gene81779:intron | 25.0% |
| ! | TTTCGTTGTATTGTGTTATA+TGG | - | 11221:7010-7029 | MS.gene81779:intron | 25.0% |
| !! | AGGAAAAACACAATTTTGTA+AGG | - | 11221:6021-6040 | MS.gene81779:intron | 25.0% |
| !! | CAGTTCTATTTTCATGAAAT+AGG | - | 11221:6857-6876 | MS.gene81779:intron | 25.0% |
| !! | CTGAATTTTACTTATGAGTA+TGG | - | 11221:2711-2730 | MS.gene81779:intron | 25.0% |
| !! | TTCTTTTAAATATCATGGAC+GGG | - | 11221:6739-6758 | MS.gene81779:intron | 25.0% |
| !! | TTGCAACTTTTCAAAATTTC+TGG | - | 11221:7053-7072 | MS.gene81779:intron | 25.0% |
| !! | TTTAAAACATGGAGGTTAAA+TGG | - | 11221:3835-3854 | MS.gene81779:intron | 25.0% |
| !! | TTTTTGTCAAAAACACGAAT+GGG | - | 11221:4411-4430 | MS.gene81779:intron | 25.0% |
| !!! | ATGTCATTGATTTATTTGCA+TGG | - | 11221:4454-4473 | MS.gene81779:intron | 25.0% |
| !!! | TATTTTTGTTATTCTTGACG+TGG | - | 11221:8351-8370 | MS.gene81779:intron | 25.0% |
| !!! | TCTTGGTTTGGTTATATTTT+TGG | - | 11221:8388-8407 | MS.gene81779:intron | 25.0% |
| !!! | TGTCATTGATTTATTTGCAT+GGG | - | 11221:4455-4474 | MS.gene81779:intron | 25.0% |
| !!! | TTATTATTAGGTTGATCCAT+TGG | - | 11221:6912-6931 | MS.gene81779:intron | 25.0% |
| !!! | TTTTATTTAACAAAACGTGC+TGG | + | 11221:3711-3730 | MS.gene81779:intergenic | 25.0% |
| !!! | TTTTTTGTCAAAAACACGAA+TGG | - | 11221:4410-4429 | MS.gene81779:intron | 25.0% |
| AAGTGTGATCAAAGAATAAG+AGG | + | 11221:4697-4716 | MS.gene81779:intergenic | 30.0% | |
| AATGCAGATATAGAAGAATC+GGG | - | 11221:3584-3603 | MS.gene81779:intron | 30.0% | |
| AATTCTTACATGTCTAATGG+GGG | + | 11221:4196-4215 | MS.gene81779:intergenic | 30.0% | |
| ACTAAACCACTTAATTGGAA+GGG | + | 11221:3988-4007 | MS.gene81779:intergenic | 30.0% | |
| AGTAGAGAAGAAGATATTGA+GGG | - | 11221:7278-7297 | MS.gene81779:intron | 30.0% | |
| ATCAAAATAGGTCCATTGTT+TGG | - | 11221:3879-3898 | MS.gene81779:intron | 30.0% | |
| ATTACCTGAGGATAAAACTA+TGG | + | 11221:7576-7595 | MS.gene81779:intergenic | 30.0% | |
| CTTAAATTGTTCATCCAAAC+AGG | - | 11221:3005-3024 | MS.gene81779:intron | 30.0% | |
| GATAACAATTTACAATTGGG+TGG | - | 11221:4957-4976 | MS.gene81779:intron | 30.0% | |
| GATTCTTCTATATCTGCATT+TGG | + | 11221:3584-3603 | MS.gene81779:intergenic | 30.0% | |
| GTGTGTAATTTATGTGTGTA+AGG | - | 11221:2766-2785 | MS.gene81779:intron | 30.0% | |
| TAACTAAATGGTAGGATTAC+TGG | - | 11221:5770-5789 | MS.gene81779:intron | 30.0% | |
| TAGTAGAGAAGAAGATATTG+AGG | - | 11221:7277-7296 | MS.gene81779:intron | 30.0% | |
| TATAACCTTGTACATGCTTT+GGG | - | 11221:4589-4608 | MS.gene81779:intron | 30.0% | |
| TCAACACTAAACCACTTAAT+TGG | + | 11221:3993-4012 | MS.gene81779:intergenic | 30.0% | |
| TCAACTGTTATGTGATTAAG+AGG | - | 11221:3062-3081 | MS.gene81779:CDS | 30.0% | |
| TCTAGTAAACCCCAATAAAT+AGG | + | 11221:5502-5521 | MS.gene81779:intergenic | 30.0% | |
| TGGATATTTATACAATGGAG+TGG | + | 11221:4031-4050 | MS.gene81779:intergenic | 30.0% | |
| TGGTGGTTATTTGTTTATCT+TGG | - | 11221:8371-8390 | MS.gene81779:intron | 30.0% | |
| TTACCTGAGGATAAAACTAT+GGG | + | 11221:7575-7594 | MS.gene81779:intergenic | 30.0% | |
| TTGGAGTTTAAGGACTAATT+AGG | + | 11221:5875-5894 | MS.gene81779:intergenic | 30.0% | |
| TTTGTCATAGATGGTGTATT+GGG | - | 11221:4282-4301 | MS.gene81779:intron | 30.0% | |
| ! | ATTGTGTTATATGGACTGAT+GGG | - | 11221:7019-7038 | MS.gene81779:intron | 30.0% |
| ! | CGATATTGCAGAAAATTTTC+TGG | - | 11221:6969-6988 | MS.gene81779:intron | 30.0% |
| ! | TATTGTGTTATATGGACTGA+TGG | - | 11221:7018-7037 | MS.gene81779:intron | 30.0% |
| ! | TATTTTCTTCAGAGTTTCCA+AGG | - | 11221:3140-3159 | MS.gene81779:intron | 30.0% |
| ! | TCTGCATTTGGTAAAGTATT+TGG | + | 11221:3572-3591 | MS.gene81779:intergenic | 30.0% |
| ! | TGGTGATTTAAAGTTCATGA+AGG | - | 11221:4380-4399 | MS.gene81779:intron | 30.0% |
| !! | GTTGTTTTCATAAGCTATCT+TGG | + | 11221:2882-2901 | MS.gene81779:intergenic | 30.0% |
| !!! | AGATTTAGCTTTTTTTGCTC+TGG | - | 11221:4257-4276 | MS.gene81779:intron | 30.0% |
| !!! | ATATGTTTATGGCGGATTTT+TGG | + | 11221:4777-4796 | MS.gene81779:intergenic | 30.0% |
| !!! | GATTTAGCTTTTTTTGCTCT+GGG | - | 11221:4258-4277 | MS.gene81779:intron | 30.0% |
| !!! | TAGTTTTATCCTCAGGTAAT+TGG | - | 11221:7576-7595 | MS.gene81779:CDS | 30.0% |
| AAACTCCAACAAGTTCATGT+GGG | - | 11221:5886-5905 | MS.gene81779:intron | 35.0% | |
| AAAGACGCGAATAAAGAAGA+GGG | - | 11221:5463-5482 | MS.gene81779:intron | 35.0% | |
| AAGAAAACAAAAAGGATCGG+AGG | + | 11221:7725-7744 | MS.gene81779:intergenic | 35.0% | |
| AAGCTATCTTGGAGAGTTTA+TGG | + | 11221:2871-2890 | MS.gene81779:intergenic | 35.0% | |
| AATATTACGCTTCCTGGATT+TGG | - | 11221:7977-7996 | MS.gene81779:intron | 35.0% | |
| AATCCAAAACCAATTACCTG+AGG | + | 11221:7588-7607 | MS.gene81779:intergenic | 35.0% | |
| AATGAAATCAGAACACAGAC+GGG | + | 11221:7910-7929 | MS.gene81779:intergenic | 35.0% | |
| AATTGGAATATTACGCTTCC+TGG | - | 11221:7971-7990 | MS.gene81779:intron | 35.0% | |
| ATATAATCTGTGAAAAGGGC+TGG | + | 11221:7934-7953 | MS.gene81779:intergenic | 35.0% | |
| CAATGAAATCAGAACACAGA+CGG | + | 11221:7911-7930 | MS.gene81779:intergenic | 35.0% | |
| CACTAAACCACTTAATTGGA+AGG | + | 11221:3989-4008 | MS.gene81779:intergenic | 35.0% | |
| CATTCGCTATATGTTTATGG+CGG | + | 11221:4785-4804 | MS.gene81779:intergenic | 35.0% | |
| CTATAACCTTGTACATGCTT+TGG | - | 11221:4588-4607 | MS.gene81779:intron | 35.0% | |
| CTCATTCAAATTGTGTTTGG+AGG | - | 11221:6470-6489 | MS.gene81779:intron | 35.0% | |
| CTGTCAACGTAGATAAAACT+AGG | + | 11221:3807-3826 | MS.gene81779:intergenic | 35.0% | |
| CTTTGTCATAGATGGTGTAT+TGG | - | 11221:4281-4300 | MS.gene81779:intron | 35.0% | |
| GAAATCAATGATAGCAACTG+AGG | - | 11221:8419-8438 | MS.gene81779:CDS | 35.0% | |
| TAAAACTAGGAAGTTCCAAC+AGG | + | 11221:3794-3813 | MS.gene81779:intergenic | 35.0% | |
| TAAACTCCAACAAGTTCATG+TGG | - | 11221:5885-5904 | MS.gene81779:intron | 35.0% | |
| TAAAGACGCGAATAAAGAAG+AGG | - | 11221:5462-5481 | MS.gene81779:intron | 35.0% | |
| TATGAGGTTATTCACTTCGT+GGG | - | 11221:2806-2825 | MS.gene81779:intron | 35.0% | |
| TCTGTATCCTTTCTTTGTCT+TGG | - | 11221:8182-8201 | MS.gene81779:intron | 35.0% | |
| TGGGACAAAATTGATGTTGA+AGG | - | 11221:6354-6373 | MS.gene81779:intron | 35.0% | |
| TGGGATGGAATAGAACAAAA+TGG | + | 11221:4087-4106 | MS.gene81779:intergenic | 35.0% | |
| TTATGAGGTTATTCACTTCG+TGG | - | 11221:2805-2824 | MS.gene81779:intron | 35.0% | |
| TTCAGCAATGCATTTGAATG+AGG | + | 11221:6555-6574 | MS.gene81779:intergenic | 35.0% | |
| ! | AAGATGTAAAAGTACGTCCT+TGG | + | 11221:7870-7889 | MS.gene81779:intergenic | 35.0% |
| ! | AAGGACGTACTTTTACATCT+TGG | - | 11221:7869-7888 | MS.gene81779:CDS | 35.0% |
| ! | AGGTGGAATTCTCTAGATTT+TGG | - | 11221:3734-3753 | MS.gene81779:intron | 35.0% |
| ! | ATGGATTGACAAAGAGTCTA+TGG | - | 11221:4744-4763 | MS.gene81779:intron | 35.0% |
| ! | GTTCTCAGGTTAGTGTATTT+TGG | - | 11221:2657-2676 | MS.gene81779:intron | 35.0% |
| ! | TAACCATAAAGGTGCAACAA+AGG | + | 11221:8048-8067 | MS.gene81779:intergenic | 35.0% |
| ! | TATGGTGTGTTTTTCGTTTG+CGG | - | 11221:2729-2748 | MS.gene81779:intron | 35.0% |
| ! | TCTGTTAGGATTGACTTATG+AGG | - | 11221:2790-2809 | MS.gene81779:intron | 35.0% |
| !! | ACTGAAGTAATTCTAGAGCA+AGG | + | 11221:6634-6653 | MS.gene81779:intergenic | 35.0% |
| !! | ACTGCATGAATTGTTTTGCA+GGG | + | 11221:7191-7210 | MS.gene81779:intergenic | 35.0% |
| !! | ATTACACTGATTTGCAAGCT+GGG | + | 11221:7321-7340 | MS.gene81779:intergenic | 35.0% |
| !! | CATGAACTTGTTGGAGTTTA+AGG | + | 11221:5885-5904 | MS.gene81779:intergenic | 35.0% |
| !! | TATCCTCAGGTAATTGGTTT+TGG | - | 11221:7582-7601 | MS.gene81779:CDS | 35.0% |
| !! | TCTTGGTTTGTACTTTGTGA+TGG | - | 11221:8108-8127 | MS.gene81779:intron | 35.0% |
| !!! | GGTTGATTATTTTGAGCAGA+AGG | + | 11221:2632-2651 | MS.gene81779:intergenic | 35.0% |
| !!! | TGATTATTTTGAGCAGAAGG+CGG | + | 11221:2629-2648 | MS.gene81779:intergenic | 35.0% |
| !!! | TTTTGTTATTCTTGACGTGG+TGG | - | 11221:8354-8373 | MS.gene81779:intron | 35.0% |
| AAGCTACCTTTCAATGCCAT+TGG | - | 11221:8501-8520 | MS.gene81779:CDS | 40.0% | |
| AATCATCGCACAGAAACAGT+GGG | + | 11221:6674-6693 | MS.gene81779:intergenic | 40.0% | |
| ACAACTTCATGAATGGACCT+TGG | + | 11221:4161-4180 | MS.gene81779:intergenic | 40.0% | |
| ACATATAGCGAATGGCGTAA+CGG | - | 11221:4791-4810 | MS.gene81779:intron | 40.0% | |
| ACATCGGAAGTCAACAACTT+TGG | - | 11221:7841-7860 | MS.gene81779:CDS | 40.0% | |
| ACTAAAGTTCGAATCCTGTC+TGG | - | 11221:6156-6175 | MS.gene81779:intron | 40.0% | |
| AGGCATCACAACTTCATGAA+TGG | + | 11221:4168-4187 | MS.gene81779:intergenic | 40.0% | |
| ATGGAGTGGAGAAAAAAAGC+TGG | + | 11221:4017-4036 | MS.gene81779:intergenic | 40.0% | |
| ATGGTGTATTGGGACCATTT+AGG | - | 11221:4292-4311 | MS.gene81779:intron | 40.0% | |
| ATTCAGTTTCAGTCCCTGTT+TGG | + | 11221:3022-3041 | MS.gene81779:intergenic | 40.0% | |
| CAACCTTTGTTGCACCTTTA+TGG | - | 11221:8042-8061 | MS.gene81779:intron | 40.0% | |
| CAACTTCATGAATGGACCTT+GGG | + | 11221:4160-4179 | MS.gene81779:intergenic | 40.0% | |
| CACAGAAAAGAGAGAACAGA+GGG | - | 11221:5312-5331 | MS.gene81779:intron | 40.0% | |
| CACCACCTCAATAATAGCAA+GGG | + | 11221:8272-8291 | MS.gene81779:intergenic | 40.0% | |
| CAGCCAAACTCCGATTATTA+GGG | - | 11221:6210-6229 | MS.gene81779:intron | 40.0% | |
| CGCCATAAACATATAGCGAA+TGG | - | 11221:4783-4802 | MS.gene81779:intron | 40.0% | |
| CGCCATTCGCTATATGTTTA+TGG | + | 11221:4788-4807 | MS.gene81779:intergenic | 40.0% | |
| GATGAAGGTTTCTGATTTCC+TGG | + | 11221:3497-3516 | MS.gene81779:intergenic | 40.0% | |
| GATTGACAAAGAGTCTATGG+CGG | - | 11221:4747-4766 | MS.gene81779:intron | 40.0% | |
| GCTCAAAATAATCAACCTGC+TGG | - | 11221:2635-2654 | MS.gene81779:intron | 40.0% | |
| TAATGAGCTCCAGTTAAGGA+TGG | - | 11221:6120-6139 | MS.gene81779:intron | 40.0% | |
| TATCCGAACACAGTTTAGAC+TGG | - | 11221:4134-4153 | MS.gene81779:intron | 40.0% | |
| TATGTGTGTAAGGGTCTGTT+AGG | - | 11221:2776-2795 | MS.gene81779:intron | 40.0% | |
| TCACAGAAAAGAGAGAACAG+AGG | - | 11221:5311-5330 | MS.gene81779:intron | 40.0% | |
| TCACCACCTCAATAATAGCA+AGG | + | 11221:8273-8292 | MS.gene81779:intergenic | 40.0% | |
| TCAGAAACCTTCATCACTTG+TGG | - | 11221:3502-3521 | MS.gene81779:intron | 40.0% | |
| TCAGCCAAACTCCGATTATT+AGG | - | 11221:6209-6228 | MS.gene81779:intron | 40.0% | |
| TCAGGATCTAACTTCTCCAA+TGG | + | 11221:6931-6950 | MS.gene81779:intergenic | 40.0% | |
| TCCTGCATAGTAGCTAGAAA+AGG | + | 11221:5823-5842 | MS.gene81779:intergenic | 40.0% | |
| TGCAGTCAATTAATCAGCCA+TGG | - | 11221:3231-3250 | MS.gene81779:intron | 40.0% | |
| TGCTTAATGAGCTCCAGTTA+AGG | - | 11221:6116-6135 | MS.gene81779:intron | 40.0% | |
| TGTATTGGGACCATTTAGGT+TGG | - | 11221:4296-4315 | MS.gene81779:intron | 40.0% | |
| TTCAACATGACGCCATAGAA+TGG | + | 11221:5670-5689 | MS.gene81779:intergenic | 40.0% | |
| TTGATCCCACATGAACTTGT+TGG | + | 11221:5894-5913 | MS.gene81779:intergenic | 40.0% | |
| TTGTGAACAGTGTTGTCGAA+TGG | + | 11221:5710-5729 | MS.gene81779:intergenic | 40.0% | |
| TTTGCCTTCTAATCAAACCC+AGG | - | 11221:3394-3413 | MS.gene81779:intron | 40.0% | |
| ! | ATCCTGTCTGGAACAATCAT+TGG | - | 11221:6168-6187 | MS.gene81779:intron | 40.0% |
| ! | CAAAGGTTGGTCATTCTTAC+CGG | + | 11221:8031-8050 | MS.gene81779:intergenic | 40.0% |
| ! | CAGAAAAGGCGGGTATTTTT+AGG | + | 11221:5581-5600 | MS.gene81779:intergenic | 40.0% |
| ! | CATAAAGGTGCAACAAAGGT+TGG | + | 11221:8044-8063 | MS.gene81779:intergenic | 40.0% |
| ! | GCTCTGTATTGGGTTTTTCT+AGG | - | 11221:3660-3679 | MS.gene81779:intron | 40.0% |
| ! | GTATTGGGACCATTTAGGTT+GGG | - | 11221:4297-4316 | MS.gene81779:intron | 40.0% |
| ! | GTTCTGAGCTGTTCTTTGTT+AGG | - | 11221:6265-6284 | MS.gene81779:intron | 40.0% |
| ! | TCGGTTCGAATTCACAAATG+CGG | - | 11221:2546-2565 | MS.gene81779:CDS | 40.0% |
| ! | TCTGTTCTCTCTTTTCTGTG+AGG | + | 11221:5312-5331 | MS.gene81779:intergenic | 40.0% |
| ! | TGGCATTTTGTATTCCGAGT+AGG | - | 11221:3754-3773 | MS.gene81779:intron | 40.0% |
| ! | TGGGTTTATTTGCTGCCTAT+AGG | + | 11221:3300-3319 | MS.gene81779:intergenic | 40.0% |
| ! | TTTATTTGCTGCCTATAGGC+CGG | + | 11221:3296-3315 | MS.gene81779:intergenic | 40.0% |
| !! | AGCTACCCTTGCTATTATTG+AGG | - | 11221:8264-8283 | MS.gene81779:intron | 40.0% |
| !! | AGTTGTTGACTTCCGATGTT+TGG | + | 11221:7840-7859 | MS.gene81779:intergenic | 40.0% |
| !! | CACTGCATGAATTGTTTTGC+AGG | + | 11221:7192-7211 | MS.gene81779:intergenic | 40.0% |
| !! | CATTACACTGATTTGCAAGC+TGG | + | 11221:7322-7341 | MS.gene81779:intergenic | 40.0% |
| !! | GCATACTGTGTTACTGACTT+AGG | - | 11221:6393-6412 | MS.gene81779:intron | 40.0% |
| !! | TACCCTTGCTATTATTGAGG+TGG | - | 11221:8267-8286 | MS.gene81779:intron | 40.0% |
| !! | TGAAGGTGTCTAATTGCAGA+AGG | - | 11221:6371-6390 | MS.gene81779:intron | 40.0% |
| !! | TTGCAGTTGAAGGACTAGTT+GGG | - | 11221:6335-6354 | MS.gene81779:intron | 40.0% |
| !!! | AATCAAACCCAGGAGCATTT+TGG | - | 11221:3404-3423 | MS.gene81779:intron | 40.0% |
| !!! | ATCAAACCCAGGAGCATTTT+GGG | - | 11221:3405-3424 | MS.gene81779:intron | 40.0% |
| !!! | GGTGTAATTGCTGTTTTAGC+TGG | - | 11221:4360-4379 | MS.gene81779:intron | 40.0% |
| !!! | TCACCCATAGTTTTATCCTC+AGG | - | 11221:7569-7588 | MS.gene81779:CDS | 40.0% |
| !!! | TCCTTTTCTAGCTACTATGC+AGG | - | 11221:5819-5838 | MS.gene81779:intron | 40.0% |
| AAACCTTCATCACTTGTGGC+TGG | - | 11221:3506-3525 | MS.gene81779:intron | 45.0% | |
| AAAGAACAGCTCAGAACCCT+TGG | + | 11221:6262-6281 | MS.gene81779:intergenic | 45.0% | |
| AACATGACGCCATAGAATGG+CGG | + | 11221:5667-5686 | MS.gene81779:intergenic | 45.0% | |
| AATATGCGTCCTTTGCTGCA+AGG | + | 11221:3327-3346 | MS.gene81779:intergenic | 45.0% | |
| AATGGCGTAACGGCAAATGA+CGG | - | 11221:4801-4820 | MS.gene81779:intron | 45.0% | |
| ACTTATGAGACCGTCATCTG+TGG | - | 11221:3169-3188 | MS.gene81779:CDS | 45.0% | |
| ATAATCGGAGTTTGGCTGAG+AGG | + | 11221:6208-6227 | MS.gene81779:intergenic | 45.0% | |
| ATCATCGCACAGAAACAGTG+GGG | + | 11221:6673-6692 | MS.gene81779:intergenic | 45.0% | |
| ATCTCATCACCACCAAATCC+AGG | + | 11221:7992-8011 | MS.gene81779:intergenic | 45.0% | |
| ATGGGGACGTTAGGATCTTT+CGG | - | 11221:2527-2546 | MS.gene81779:CDS | 45.0% | |
| ATTACGAGGCCCAACCTAAA+TGG | + | 11221:4309-4328 | MS.gene81779:intergenic | 45.0% | |
| ATTACGCTTCCTGGATTTGG+TGG | - | 11221:7980-7999 | MS.gene81779:intron | 45.0% | |
| ATTCACTTCGTGGGACTGTT+TGG | - | 11221:2815-2834 | MS.gene81779:intron | 45.0% | |
| ATTTGCATGGGTTTCTCAGC+TGG | - | 11221:4467-4486 | MS.gene81779:intron | 45.0% | |
| CAGTTAAGGATGGATCGTTC+AGG | - | 11221:6130-6149 | MS.gene81779:intron | 45.0% | |
| CCAAGAATGTCTGCAACTTC+AGG | + | 11221:6949-6968 | MS.gene81779:intergenic | 45.0% | |
| CCTGAAGTTGCAGACATTCT+TGG | - | 11221:6946-6965 | MS.gene81779:intron | 45.0% | |
| CGAATGCGATTCAGAAAAGG+CGG | + | 11221:5592-5611 | MS.gene81779:intergenic | 45.0% | |
| CTGAACGATCCATCCTTAAC+TGG | + | 11221:6132-6151 | MS.gene81779:intergenic | 45.0% | |
| CTTATGAGACCGTCATCTGT+GGG | - | 11221:3170-3189 | MS.gene81779:CDS | 45.0% | |
| CTTCAGAGTTTCCAAGGTCA+TGG | - | 11221:3146-3165 | MS.gene81779:intron | 45.0% | |
| GAATCATCGCACAGAAACAG+TGG | + | 11221:6675-6694 | MS.gene81779:intergenic | 45.0% | |
| GAATGCGATTCAGAAAAGGC+GGG | + | 11221:5591-5610 | MS.gene81779:intergenic | 45.0% | |
| GACCAATGATTGTTCCAGAC+AGG | + | 11221:6173-6192 | MS.gene81779:intergenic | 45.0% | |
| GCGAATAAAGAAGAGGGTAG+TGG | - | 11221:5469-5488 | MS.gene81779:intron | 45.0% | |
| GGTAATCTACTTTGACTCCC+TGG | + | 11221:3551-3570 | MS.gene81779:intergenic | 45.0% | |
| GGTCTAAGAGACGATTGAAC+AGG | + | 11221:2602-2621 | MS.gene81779:intergenic | 45.0% | |
| GTCATGTTGAATTTCCGCCA+TGG | - | 11221:5679-5698 | MS.gene81779:intron | 45.0% | |
| GTCTCATAAGTCCATGACCT+TGG | + | 11221:3160-3179 | MS.gene81779:intergenic | 45.0% | |
| GTTCACCCAAAGCATGTACA+AGG | + | 11221:4597-4616 | MS.gene81779:intergenic | 45.0% | |
| GTTGCTCACTAGCCAAACAT+CGG | - | 11221:7825-7844 | MS.gene81779:CDS | 45.0% | |
| TAACCCAGGGCCCTAATAAT+CGG | + | 11221:6223-6242 | MS.gene81779:intergenic | 45.0% | |
| TACAGAAACTTACAGCCGCT+AGG | + | 11221:8168-8187 | MS.gene81779:intergenic | 45.0% | |
| TAGATCACATGACCCAACTC+AGG | + | 11221:5541-5560 | MS.gene81779:intergenic | 45.0% | |
| TCCTTTGCTGCAAGGATTGT+GGG | + | 11221:3319-3338 | MS.gene81779:intergenic | 45.0% | |
| TGAACAGGTCTCTGTTGATG+TGG | + | 11221:2587-2606 | MS.gene81779:intergenic | 45.0% | |
| TGCATACCTTGTGATGCACT+TGG | + | 11221:3215-3234 | MS.gene81779:intergenic | 45.0% | |
| TGCTCCTGGGTTTGATTAGA+AGG | + | 11221:3401-3420 | MS.gene81779:intergenic | 45.0% | |
| TTGTTGCCCAAAATGCTCCT+GGG | + | 11221:3414-3433 | MS.gene81779:intergenic | 45.0% | |
| TTTGCATGGGTTTCTCAGCT+GGG | - | 11221:4468-4487 | MS.gene81779:intron | 45.0% | |
| ! | AACAGAGGGCTTTGTGATGA+TGG | - | 11221:5326-5345 | MS.gene81779:intron | 45.0% |
| ! | GTACATGCTTTGGGTGAACA+GGG | - | 11221:4598-4617 | MS.gene81779:intron | 45.0% |
| ! | GTCAACAACTTTGGAAGCCA+AGG | - | 11221:7850-7869 | MS.gene81779:CDS | 45.0% |
| ! | GTGGCATTTGTTGCAGTTGA+AGG | - | 11221:6325-6344 | MS.gene81779:intron | 45.0% |
| ! | GTTGCAGTTGAAGGACTAGT+TGG | - | 11221:6334-6353 | MS.gene81779:intron | 45.0% |
| ! | TGTACATGCTTTGGGTGAAC+AGG | - | 11221:4597-4616 | MS.gene81779:intron | 45.0% |
| ! | TTATTTGCTGCCTATAGGCC+GGG | + | 11221:3295-3314 | MS.gene81779:intergenic | 45.0% |
| ! | TTTAAGGTTGGGAGAGCCAA+TGG | + | 11221:8520-8539 | MS.gene81779:intergenic | 45.0% |
| !! | GCATGAATTGTTTTGCAGGG+TGG | + | 11221:7188-7207 | MS.gene81779:intergenic | 45.0% |
| !! | TAATCAACCTGCTGGTTCTC+AGG | - | 11221:2643-2662 | MS.gene81779:intron | 45.0% |
| !! | TATTCACAAAGAGCGCCTAG+CGG | - | 11221:8150-8169 | MS.gene81779:intron | 45.0% |
| !!! | TTATTTTGAGCAGAAGGCGG+CGG | + | 11221:2626-2645 | MS.gene81779:intergenic | 45.0% |
| !!! | ACATTTATATTTTTATTATT+AGG | - | 11221:6900-6919 | MS.gene81779:intron | 5.0% |
| AAACCCATTTCGGCCTGAGT+TGG | - | 11221:5525-5544 | MS.gene81779:intron | 50.0% | |
| AACCCATTTCGGCCTGAGTT+GGG | - | 11221:5526-5545 | MS.gene81779:intron | 50.0% | |
| AACGTCCCCATTCCTTGCAT+TGG | + | 11221:2518-2537 | MS.gene81779:intergenic | 50.0% | |
| AACTCCGATTATTAGGGCCC+TGG | - | 11221:6216-6235 | MS.gene81779:intron | 50.0% | |
| AACTGAGGCTGCACATCCTA+AGG | - | 11221:8434-8453 | MS.gene81779:CDS | 50.0% | |
| AATCAGCCATGGTTGTCGTC+TGG | - | 11221:3242-3261 | MS.gene81779:intron | 50.0% | |
| AATTCACAAATGCGGCCAGG+TGG | - | 11221:2554-2573 | MS.gene81779:CDS | 50.0% | |
| ACACTAACCTGAGAACCAGC+AGG | + | 11221:2653-2672 | MS.gene81779:intergenic | 50.0% | |
| ACAGGTCTCTGTTGATGTGG+AGG | + | 11221:2584-2603 | MS.gene81779:intergenic | 50.0% | |
| ACCCACAATCCTTGCAGCAA+AGG | - | 11221:3315-3334 | MS.gene81779:intron | 50.0% | |
| ACTCCGATTATTAGGGCCCT+GGG | - | 11221:6217-6236 | MS.gene81779:intron | 50.0% | |
| ACTGAGGCTGCACATCCTAA+GGG | - | 11221:8435-8454 | MS.gene81779:CDS | 50.0% | |
| ACTTCGTGGGACTGTTTGGA+AGG | - | 11221:2819-2838 | MS.gene81779:intron | 50.0% | |
| ATCAGCCATGGTTGTCGTCT+GGG | - | 11221:3243-3262 | MS.gene81779:intron | 50.0% | |
| ATGCAAGGAATGGGGACGTT+AGG | - | 11221:2518-2537 | MS.gene81779:CDS | 50.0% | |
| CACAGGTTACAAGGCTACAG+GGG | - | 11221:3471-3490 | MS.gene81779:intron | 50.0% | |
| CATCCATGAGCTAGTCCATC+AGG | - | 11221:3631-3650 | MS.gene81779:intron | 50.0% | |
| CATGTCTAATGGGGGACTTG+AGG | + | 11221:4188-4207 | MS.gene81779:intergenic | 50.0% | |
| CCACAGGTTACAAGGCTACA+GGG | - | 11221:3470-3489 | MS.gene81779:intron | 50.0% | |
| CCATCTCCAAGTGCATCACA+AGG | - | 11221:3206-3225 | MS.gene81779:CDS | 50.0% | |
| CCTTGTGATGCACTTGGAGA+TGG | + | 11221:3209-3228 | MS.gene81779:intergenic | 50.0% | |
| CGGCGAATGCGATTCAGAAA+AGG | + | 11221:5595-5614 | MS.gene81779:intergenic | 50.0% | |
| CTTGTTGCCCAAAATGCTCC+TGG | + | 11221:3415-3434 | MS.gene81779:intergenic | 50.0% | |
| GCGGAGAAGAATGAAGAGAG+TGG | - | 11221:5281-5300 | MS.gene81779:intron | 50.0% | |
| GCTGCTCCCTTCCAATTAAG+TGG | - | 11221:3979-3998 | MS.gene81779:intron | 50.0% | |
| GGGCCAGTCTAAACTGTGTT+CGG | + | 11221:4140-4159 | MS.gene81779:intergenic | 50.0% | |
| GGGCCCTAATAATCGGAGTT+TGG | + | 11221:6216-6235 | MS.gene81779:intergenic | 50.0% | |
| GGGTAGCTCATGATGTTTGC+CGG | + | 11221:8252-8271 | MS.gene81779:intergenic | 50.0% | |
| GTCCTTTGCTGCAAGGATTG+TGG | + | 11221:3320-3339 | MS.gene81779:intergenic | 50.0% | |
| TCGAATTCACAAATGCGGCC+AGG | - | 11221:2551-2570 | MS.gene81779:CDS | 50.0% | |
| TGTCCAGCCACAAGTGATGA+AGG | + | 11221:3512-3531 | MS.gene81779:intergenic | 50.0% | |
| ! | ACACAGTTTAGACTGGCCCA+AGG | - | 11221:4141-4160 | MS.gene81779:intron | 50.0% |
| ! | CAGGCTTCTGGTAGTGCAAA+GGG | - | 11221:8468-8487 | MS.gene81779:CDS | 50.0% |
| ! | GCTCTGGGCTTTGTCATAGA+TGG | - | 11221:4273-4292 | MS.gene81779:intron | 50.0% |
| ! | GGAGAGCCAATGGCATTGAA+AGG | + | 11221:8510-8529 | MS.gene81779:intergenic | 50.0% |
| ! | TATTTGCTGCCTATAGGCCG+GGG | + | 11221:3294-3313 | MS.gene81779:intergenic | 50.0% |
| ! | TCAGGCTTCTGGTAGTGCAA+AGG | - | 11221:8467-8486 | MS.gene81779:CDS | 50.0% |
| ! | TGGTAGTGCAAAGGGTAGTC+AGG | - | 11221:8476-8495 | MS.gene81779:CDS | 50.0% |
| !! | ACACTGATTTGCAAGCTGGG+AGG | + | 11221:7318-7337 | MS.gene81779:intergenic | 50.0% |
| !! | ACTGATTTGCAAGCTGGGAG+GGG | + | 11221:7316-7335 | MS.gene81779:intergenic | 50.0% |
| !! | AGAGGGCTTTGTGATGATGG+TGG | - | 11221:5329-5348 | MS.gene81779:intron | 50.0% |
| !! | CACTGATTTGCAAGCTGGGA+GGG | + | 11221:7317-7336 | MS.gene81779:intergenic | 50.0% |
| !! | GACGGGTTACAATTCGACTC+TGG | - | 11221:6756-6775 | MS.gene81779:intron | 50.0% |
| !! | GGCTTTGTGATGATGGTGGT+CGG | - | 11221:5333-5352 | MS.gene81779:intron | 50.0% |
| !! | TAGTGGTGGTGGTCACAGTT+GGG | - | 11221:5387-5406 | MS.gene81779:intron | 50.0% |
| !! | TTTGTGATGATGGTGGTCGG+TGG | - | 11221:5336-5355 | MS.gene81779:intron | 50.0% |
| ACTCCCTGGTTGAACTGCAC+CGG | + | 11221:3537-3556 | MS.gene81779:intergenic | 55.0% | |
| AGACCTTCAGCGTGCCTACT+CGG | + | 11221:3771-3790 | MS.gene81779:intergenic | 55.0% | |
| AGTCCGGTGCAGTTCAACCA+GGG | - | 11221:3531-3550 | MS.gene81779:intron | 55.0% | |
| ATACAGAGCAGCGCACCTGA+TGG | + | 11221:3649-3668 | MS.gene81779:intergenic | 55.0% | |
| ATGACGCCATAGAATGGCGG+TGG | + | 11221:5664-5683 | MS.gene81779:intergenic | 55.0% | |
| ATTCCGAGTAGGCACGCTGA+AGG | - | 11221:3765-3784 | MS.gene81779:intron | 55.0% | |
| CAGGTGCGCTGCTCTGTATT+GGG | - | 11221:3650-3669 | MS.gene81779:intron | 55.0% | |
| CATGACCGTAATCCTTGCGG+CGG | - | 11221:5616-5635 | MS.gene81779:intron | 55.0% | |
| CGAGCGCCAATGCAAGGAAT+GGG | - | 11221:2509-2528 | MS.gene81779:CDS | 55.0% | |
| CGCAAGGATTACGGTCATGG+CGG | + | 11221:5615-5634 | MS.gene81779:intergenic | 55.0% | |
| CGCACAGAAACAGTGGGGAA+AGG | + | 11221:6668-6687 | MS.gene81779:intergenic | 55.0% | |
| CGCCATGACCGTAATCCTTG+CGG | - | 11221:5613-5632 | MS.gene81779:intron | 55.0% | |
| CTCACCAGCCACAGGTTACA+AGG | - | 11221:3462-3481 | MS.gene81779:intron | 55.0% | |
| CTGCTGTGAAGCTGTTGGCA+TGG | + | 11221:3366-3385 | MS.gene81779:intergenic | 55.0% | |
| CTTGGAGATGGAGCTGAAGG+TGG | + | 11221:3197-3216 | MS.gene81779:intergenic | 55.0% | |
| CTTGTAACCTGTGGCTGGTG+AGG | + | 11221:3464-3483 | MS.gene81779:intergenic | 55.0% | |
| GAAGGTGGTCCCACAGATGA+CGG | + | 11221:3182-3201 | MS.gene81779:intergenic | 55.0% | |
| GACCCAACTCAGGCCGAAAT+GGG | + | 11221:5531-5550 | MS.gene81779:intergenic | 55.0% | |
| GAGCGCCAATGCAAGGAATG+GGG | - | 11221:2510-2529 | MS.gene81779:CDS | 55.0% | |
| GCACTTGGAGATGGAGCTGA+AGG | + | 11221:3200-3219 | MS.gene81779:intergenic | 55.0% | |
| GCCACAGGTTACAAGGCTAC+AGG | - | 11221:3469-3488 | MS.gene81779:intron | 55.0% | |
| GCGTGGCAGAATTAGCATGG+AGG | + | 11221:5642-5661 | MS.gene81779:intergenic | 55.0% | |
| GTGGCGTGGCAGAATTAGCA+TGG | + | 11221:5645-5664 | MS.gene81779:intergenic | 55.0% | |
| GTTGTCGAATGGTTGCGCCA+TGG | + | 11221:5699-5718 | MS.gene81779:intergenic | 55.0% | |
| TCACTTGTGGCTGGACAGTC+CGG | - | 11221:3515-3534 | MS.gene81779:intron | 55.0% | |
| TCAGGTGCGCTGCTCTGTAT+TGG | - | 11221:3649-3668 | MS.gene81779:intron | 55.0% | |
| TGACCCAACTCAGGCCGAAA+TGG | + | 11221:5532-5551 | MS.gene81779:intergenic | 55.0% | |
| TGCTGCTGCTGTGAAGCTGT+TGG | + | 11221:3371-3390 | MS.gene81779:intergenic | 55.0% | |
| TGGTGGTCACAGTTGGGTAG+TGG | - | 11221:5393-5412 | MS.gene81779:intron | 55.0% | |
| ! | AGTTAGGTGGTGGTCGCAGT+TGG | - | 11221:5363-5382 | MS.gene81779:intron | 55.0% |
| ! | CTGATTTGCAAGCTGGGAGG+GGG | + | 11221:7315-7334 | MS.gene81779:intergenic | 55.0% |
| ! | GTTAGGTGGTGGTCGCAGTT+GGG | - | 11221:5364-5383 | MS.gene81779:intron | 55.0% |
| ! | TGATTTGCAAGCTGGGAGGG+GGG | + | 11221:7314-7333 | MS.gene81779:intergenic | 55.0% |
| ! | TGGCATGGATTGCTGCTGCT+GGG | + | 11221:3351-3370 | MS.gene81779:intergenic | 55.0% |
| ! | TGGTCACAGTTGGGTAGTGG+TGG | - | 11221:5396-5415 | MS.gene81779:intron | 55.0% |
| ! | TTGGCATGGATTGCTGCTGC+TGG | + | 11221:3352-3371 | MS.gene81779:intergenic | 55.0% |
| !! | CCCTGTAGCCTTGTAACCTG+TGG | + | 11221:3473-3492 | MS.gene81779:intergenic | 55.0% |
| !! | GCACCTGATGGACTAGCTCA+TGG | + | 11221:3637-3656 | MS.gene81779:intergenic | 55.0% |
| !! | GTAGCCTTGTAACCTGTGGC+TGG | + | 11221:3469-3488 | MS.gene81779:intergenic | 55.0% |
| !! | GTAGTGGTGGTGGTCACAGT+TGG | - | 11221:5386-5405 | MS.gene81779:intron | 55.0% |
| !! | TGATGTGGAGGCATTCCACC+TGG | + | 11221:2572-2591 | MS.gene81779:intergenic | 55.0% |
| ACATGTGCCTCACCAGCCAC+AGG | - | 11221:3454-3473 | MS.gene81779:intron | 60.0% | |
| CAGTCCGGTGCAGTTCAACC+AGG | - | 11221:3530-3549 | MS.gene81779:intron | 60.0% | |
| CGCCGCAAGGATTACGGTCA+TGG | + | 11221:5618-5637 | MS.gene81779:intergenic | 60.0% | |
| CGGTGGTCGAAGTTAGGTGG+TGG | - | 11221:5353-5372 | MS.gene81779:intron | 60.0% | |
| CTATAGGCCGGGGATGGCAA+AGG | + | 11221:3284-3303 | MS.gene81779:intergenic | 60.0% | |
| CTTTGCCATCCCCGGCCTAT+AGG | - | 11221:3282-3301 | MS.gene81779:intron | 60.0% | |
| GAAGCCTCCTTTGCCATCCC+CGG | - | 11221:3274-3293 | MS.gene81779:intron | 60.0% | |
| GATGGCAAAGGAGGCTTCCC+TGG | + | 11221:3272-3291 | MS.gene81779:intergenic | 60.0% | |
| GCACATCCTAAGGGCTCTGC+TGG | - | 11221:8444-8463 | MS.gene81779:CDS | 60.0% | |
| GCACGCTGAAGGTCTCCTGT+TGG | - | 11221:3776-3795 | MS.gene81779:intron | 60.0% | |
| GCGAGCGCCAATGCAAGGAA+TGG | - | 11221:2508-2527 | MS.gene81779:CDS | 60.0% | |
| GGTCGGTGGTCGAAGTTAGG+TGG | - | 11221:5350-5369 | MS.gene81779:intron | 60.0% | |
| GGTGGTCGGTGGTCGAAGTT+AGG | - | 11221:5347-5366 | MS.gene81779:intron | 60.0% | |
| GTCGAATGGTTGCGCCATGG+CGG | + | 11221:5696-5715 | MS.gene81779:intergenic | 60.0% | |
| GTTACAAGGCTACAGGGGCC+AGG | - | 11221:3476-3495 | MS.gene81779:intron | 60.0% | |
| TCCTAAGGGCTCTGCTGGTC+AGG | - | 11221:8449-8468 | MS.gene81779:CDS | 60.0% | |
| TGGTGGTCGCAGTTGGGTAG+TGG | - | 11221:5370-5389 | MS.gene81779:intron | 60.0% | |
| TGTGGCTGGTGAGGCACATG+TGG | + | 11221:3455-3474 | MS.gene81779:intergenic | 60.0% | |
| ! | TCGCAGTTGGGTAGTGGTGG+TGG | - | 11221:5376-5395 | MS.gene81779:intron | 60.0% |
| ! | TGGTCGCAGTTGGGTAGTGG+TGG | - | 11221:5373-5392 | MS.gene81779:intron | 60.0% |
| ! | TTTTGAGCAGAAGGCGGCGG+TGG | + | 11221:2623-2642 | MS.gene81779:intergenic | 60.0% |
| GCCACGCCACCGCCATTCTA+TGG | - | 11221:5655-5674 | MS.gene81779:intron | 65.0% | |
| GCCATAGAATGGCGGTGGCG+TGG | + | 11221:5659-5678 | MS.gene81779:intergenic | 65.0% | |
| GCCTGACCAGCAGAGCCCTT+AGG | + | 11221:8453-8472 | MS.gene81779:intergenic | 65.0% | |
| GGAGGCCGCCGCAAGGATTA+CGG | + | 11221:5624-5643 | MS.gene81779:intergenic | 65.0% | |
| GGCAAAGGAGGCTTCCCTGG+TGG | + | 11221:3269-3288 | MS.gene81779:intergenic | 65.0% | |
| GGCTCTGCTGGTCAGGCTTC+TGG | - | 11221:8456-8475 | MS.gene81779:CDS | 65.0% | |
| GGTGGCCCAGACGACAACCA+TGG | + | 11221:3251-3270 | MS.gene81779:intergenic | 65.0% | |
| GGTTGTCGTCTGGGCCACCA+GGG | - | 11221:3252-3271 | MS.gene81779:intron | 65.0% | |
| TAGGCCGGGGATGGCAAAGG+AGG | + | 11221:3281-3300 | MS.gene81779:intergenic | 65.0% | |
| TGCTGCCTATAGGCCGGGGA+TGG | + | 11221:3290-3309 | MS.gene81779:intergenic | 65.0% | |
| TGGTTGTCGTCTGGGCCACC+AGG | - | 11221:3251-3270 | MS.gene81779:intron | 65.0% | |
| TTAGCATGGAGGCCGCCGCA+AGG | + | 11221:5631-5650 | MS.gene81779:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 11221 | gene | 2506 | 8548 | 2506 | ID=MS.gene81779 |
| 11221 | mRNA | 2506 | 8548 | 2506 | ID=MS.gene81779.t1;Parent=MS.gene81779 |
| 11221 | exon | 8390 | 8548 | 8390 | ID=MS.gene81779.t1.exon1;Parent=MS.gene81779.t1 |
| 11221 | CDS | 8390 | 8548 | 8390 | ID=cds.MS.gene81779.t1;Parent=MS.gene81779.t1 |
| 11221 | exon | 7402 | 7902 | 7402 | ID=MS.gene81779.t1.exon2;Parent=MS.gene81779.t1 |
| 11221 | CDS | 7402 | 7902 | 7402 | ID=cds.MS.gene81779.t1;Parent=MS.gene81779.t1 |
| 11221 | exon | 4058 | 4132 | 4058 | ID=MS.gene81779.t1.exon3;Parent=MS.gene81779.t1 |
| 11221 | CDS | 4058 | 4132 | 4058 | ID=cds.MS.gene81779.t1;Parent=MS.gene81779.t1 |
| 11221 | exon | 3164 | 3242 | 3164 | ID=MS.gene81779.t1.exon4;Parent=MS.gene81779.t1 |
| 11221 | CDS | 3164 | 3242 | 3164 | ID=cds.MS.gene81779.t1;Parent=MS.gene81779.t1 |
| 11221 | exon | 3024 | 3088 | 3024 | ID=MS.gene81779.t1.exon5;Parent=MS.gene81779.t1 |
| 11221 | CDS | 3024 | 3088 | 3024 | ID=cds.MS.gene81779.t1;Parent=MS.gene81779.t1 |
| 11221 | exon | 2880 | 2915 | 2880 | ID=MS.gene81779.t1.exon6;Parent=MS.gene81779.t1 |
| 11221 | CDS | 2880 | 2915 | 2880 | ID=cds.MS.gene81779.t1;Parent=MS.gene81779.t1 |
| 11221 | exon | 2506 | 2640 | 2506 | ID=MS.gene81779.t1.exon7;Parent=MS.gene81779.t1 |
| 11221 | CDS | 2506 | 2640 | 2506 | ID=cds.MS.gene81779.t1;Parent=MS.gene81779.t1 |
| Gene Sequence |
| Protein sequence |
