AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene82053

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene82053.t1 MTR_0092s0100 94.872 741 21 4 1 736 1 729 0.0 1426
MS.gene82053.t1 MTR_0092s0100 94.872 741 21 4 1 736 4 732 0.0 1426
MS.gene82053.t1 MTR_4g026485 53.532 538 193 11 211 736 133 625 2.95e-176 518
MS.gene82053.t1 MTR_4g026485 33.990 203 105 8 1 190 1 187 4.43e-11 66.6
MS.gene82053.t1 MTR_0092s0060 94.652 187 8 1 1 187 1 185 1.86e-102 312
MS.gene82053.t1 MTR_8g077940 36.216 370 219 11 377 736 180 542 6.18e-59 209
MS.gene82053.t1 MTR_3g065980 28.421 380 244 7 376 735 169 540 4.46e-36 144
MS.gene82053.t1 MTR_7g027190 26.256 438 271 11 324 736 264 674 2.59e-34 140
MS.gene82053.t1 MTR_3g056110 26.525 377 250 9 378 735 174 542 6.50e-31 128
MS.gene82053.t1 MTR_4g076020 28.533 368 224 13 382 735 87 429 1.29e-29 122
MS.gene82053.t1 MTR_5g058860 29.188 394 235 15 376 736 116 498 3.76e-28 119
MS.gene82053.t1 MTR_4g077760 28.818 406 265 12 345 735 159 555 5.64e-28 119
MS.gene82053.t1 MTR_5g094450 24.933 373 261 7 380 735 162 532 2.23e-27 117
MS.gene82053.t1 MTR_3g089055 27.419 372 249 9 380 735 199 565 1.74e-26 115
MS.gene82053.t1 MTR_3g089055 27.419 372 249 9 380 735 204 570 1.75e-26 115
MS.gene82053.t1 MTR_7g074650 27.322 366 240 9 382 735 441 792 4.67e-26 114
MS.gene82053.t1 MTR_2g082090 26.031 388 263 9 365 734 197 578 1.79e-25 112
MS.gene82053.t1 MTR_3g072710 26.933 401 237 16 376 736 117 501 2.00e-25 111
MS.gene82053.t1 MTR_5g097480 22.817 355 257 7 395 735 193 544 2.46e-24 108
MS.gene82053.t1 MTR_8g093070 26.542 373 253 9 373 734 133 495 3.10e-24 107
MS.gene82053.t1 MTR_1g029420 26.596 376 247 12 380 735 226 592 3.20e-24 108
MS.gene82053.t1 MTR_5g019750 32.328 232 142 7 513 736 71 295 9.44e-24 102
MS.gene82053.t1 MTR_2g026250 24.804 383 252 11 378 736 227 597 2.77e-23 105
MS.gene82053.t1 MTR_4g102790 23.545 378 265 7 376 734 289 661 3.62e-23 105
MS.gene82053.t1 MTR_1g069725 28.267 375 239 16 376 736 106 464 3.83e-22 100
MS.gene82053.t1 MTR_4g133660 23.622 381 255 9 380 736 176 544 5.24e-22 100
MS.gene82053.t1 MTR_4g104020 25.000 388 252 12 376 736 146 521 1.17e-21 99.8
MS.gene82053.t1 MTR_8g442410 22.798 386 260 10 376 735 152 525 4.48e-18 88.6
MS.gene82053.t1 MTR_4g097080 20.896 402 265 12 366 735 123 503 2.69e-17 85.9
MS.gene82053.t1 MTR_2g097473 22.911 371 263 9 380 734 290 653 6.67e-17 85.5
MS.gene82053.t1 MTR_2g034260 24.611 386 259 12 375 735 206 584 7.75e-17 85.1
MS.gene82053.t1 MTR_2g034250 23.885 381 269 9 375 735 206 585 8.70e-17 84.7
MS.gene82053.t1 MTR_2g034280 23.454 388 272 10 365 735 196 575 1.05e-16 84.7
MS.gene82053.t1 MTR_2g097390 24.397 373 256 11 380 734 276 640 4.36e-16 82.8
MS.gene82053.t1 MTR_2g097410 22.572 381 257 9 380 734 372 740 8.85e-16 82.0
MS.gene82053.t1 MTR_2g099110 26.829 246 158 5 380 611 75 312 1.00e-15 80.9
MS.gene82053.t1 MTR_2g097310 23.057 386 245 10 380 734 273 637 1.01e-15 81.6
MS.gene82053.t1 MTR_7g062120 22.938 388 247 8 380 735 373 740 1.13e-15 81.6
MS.gene82053.t1 MTR_4g064160 21.550 413 284 10 350 734 283 683 2.49e-15 80.5
MS.gene82053.t1 MTR_4g064200 22.493 369 268 6 380 734 285 649 3.27e-15 80.1
MS.gene82053.t1 MTR_2g097467 24.275 276 184 7 348 602 247 518 8.46e-15 78.6
MS.gene82053.t1 MTR_2g097463 21.294 371 269 7 380 734 291 654 1.26e-14 78.2
MS.gene82053.t1 MTR_2g097380 22.992 361 233 9 387 734 232 560 1.52e-14 77.8
MS.gene82053.t1 MTR_4g076140 32.941 170 106 2 356 517 19 188 5.39e-14 75.5
MS.gene82053.t1 MTR_2g089100 22.388 402 253 14 380 734 53 442 5.62e-14 75.5
MS.gene82053.t1 MTR_4g064180 22.162 370 266 9 380 730 255 621 6.04e-14 75.9
MS.gene82053.t1 MTR_4g064120 22.630 327 233 7 380 688 255 579 3.65e-13 73.6
MS.gene82053.t1 MTR_2g097350 24.011 379 250 14 380 734 275 639 4.70e-13 73.2
MS.gene82053.t1 MTR_4g064150 25.523 239 163 5 380 604 362 599 6.08e-13 72.8
MS.gene82053.t1 MTR_5g009080 27.179 195 136 2 356 548 33 223 1.13e-12 71.2
MS.gene82053.t1 MTR_7g057230 26.010 396 218 17 380 734 295 656 2.17e-12 70.9
MS.gene82053.t1 MTR_5g015490 21.212 396 252 11 380 735 115 490 4.02e-12 69.7
MS.gene82053.t1 MTR_3g022830 30.345 145 91 2 380 518 26 166 2.02e-11 67.4
MS.gene82053.t1 MTR_1g086970 23.457 405 269 16 360 735 86 478 6.61e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene82053.t1 AT4G00150 56.959 388 139 10 352 736 193 555 2.75e-137 416
MS.gene82053.t1 AT2G45160 47.854 466 202 16 294 736 193 640 1.61e-120 375
MS.gene82053.t1 AT3G60630 44.554 505 204 17 273 736 154 623 6.42e-110 347
MS.gene82053.t1 AT4G36710 32.888 374 225 12 377 735 123 485 4.21e-55 197
MS.gene82053.t1 AT2G01570 29.570 372 239 9 376 735 221 581 9.52e-34 137
MS.gene82053.t1 AT5G66770 27.735 393 261 12 358 735 200 584 1.28e-30 128
MS.gene82053.t1 AT3G03450 27.321 377 246 10 376 735 180 545 2.19e-30 127
MS.gene82053.t1 AT5G17490 28.989 376 235 13 376 735 157 516 8.47e-30 124
MS.gene82053.t1 AT1G14920 26.790 377 243 9 376 735 169 529 3.99e-29 122
MS.gene82053.t1 AT2G04890 25.469 373 248 8 380 735 54 413 1.25e-28 119
MS.gene82053.t1 AT3G54220 27.778 360 247 8 382 734 296 649 2.51e-28 121
MS.gene82053.t1 AT5G41920 24.878 410 267 10 342 735 16 400 2.54e-28 118
MS.gene82053.t1 AT5G48150 24.194 372 262 8 380 735 123 490 8.31e-28 118
MS.gene82053.t1 AT5G48150 24.194 372 262 8 380 735 123 490 8.31e-28 118
MS.gene82053.t1 AT5G48150 24.194 372 262 8 380 735 123 490 8.31e-28 118
MS.gene82053.t1 AT5G48150 24.194 372 262 8 380 735 123 490 8.31e-28 118
MS.gene82053.t1 AT3G50650 28.533 375 223 12 389 735 185 542 1.96e-27 117
MS.gene82053.t1 AT1G66350 25.606 371 251 10 376 736 152 507 1.96e-26 114
MS.gene82053.t1 AT1G50600 23.656 372 263 7 380 735 160 526 8.39e-26 112
MS.gene82053.t1 AT4G17230 25.789 380 245 8 380 735 159 525 1.73e-25 111
MS.gene82053.t1 AT4G17230 25.789 380 245 8 380 735 159 525 1.73e-25 111
MS.gene82053.t1 AT1G50600 23.656 372 263 7 380 735 231 597 2.12e-25 112
MS.gene82053.t1 AT1G50600 23.656 372 263 7 380 735 235 601 2.30e-25 112
MS.gene82053.t1 AT1G21450 24.574 411 272 11 353 735 193 593 3.51e-25 111
MS.gene82053.t1 AT4G08250 28.496 379 245 14 376 734 104 476 5.64e-25 109
MS.gene82053.t1 AT5G59450 23.095 420 282 10 346 735 190 598 1.07e-21 100
MS.gene82053.t1 AT1G63100 23.990 396 248 14 376 734 274 653 5.40e-19 92.0
MS.gene82053.t1 AT1G63100 23.990 396 248 14 376 734 249 628 5.88e-19 92.0
MS.gene82053.t1 AT1G55580 23.853 327 223 6 425 735 129 445 5.39e-18 87.8
MS.gene82053.t1 AT1G07520 20.800 375 270 8 383 734 322 692 4.27e-17 86.3
MS.gene82053.t1 AT1G07520 20.800 375 270 8 383 734 323 693 4.27e-17 86.3
MS.gene82053.t1 AT1G07520 20.800 375 270 8 383 734 158 528 5.90e-17 85.1
MS.gene82053.t1 AT1G07520 20.800 375 270 8 383 734 158 528 5.90e-17 85.1
MS.gene82053.t1 AT3G46600 21.337 389 282 7 368 735 194 579 1.59e-15 80.9
MS.gene82053.t1 AT3G46600 26.289 194 134 2 368 552 162 355 4.04e-15 79.3
MS.gene82053.t1 AT1G07530 22.812 377 260 9 380 734 397 764 4.30e-15 79.7
MS.gene82053.t1 AT3G46600 26.857 175 126 1 380 552 5 179 5.32e-15 77.8
MS.gene82053.t1 AT1G50420 28.866 194 118 5 376 558 54 238 1.87e-14 77.0
MS.gene82053.t1 AT4G37650 21.696 401 251 10 380 735 147 529 2.34e-14 77.0
MS.gene82053.t1 AT5G52510 23.885 314 193 11 457 735 338 640 2.28e-12 70.9
MS.gene82053.t1 AT2G29065 20.690 377 275 7 380 734 253 627 7.49e-11 65.9

Find 155 sgRNAs with CRISPR-Local

Find 189 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTTGTGAAGAACTGAAATT+AGG 0.187840 7.3:+59820540 None:intergenic
GGAAAAGGTGTGTTAGATTT+TGG 0.194202 7.3:-59821185 MS.gene82053:CDS
AAGTTACCATTTGAAGAAAT+AGG 0.249425 7.3:+59820675 None:intergenic
GACAATTGAGAAGCTTGTTT+TGG 0.255336 7.3:-59819251 MS.gene82053:CDS
AGTCTCTGAATTCTGTTTCA+TGG 0.261651 7.3:-59819558 MS.gene82053:CDS
ATTTGTTCTGATTTCCCTTT+TGG 0.265105 7.3:-59820591 MS.gene82053:CDS
TCTTCGCCGCCACCGCTTCC+AGG 0.267033 7.3:+59820147 None:intergenic
TTCCATTATCAATTTCAATA+TGG 0.276508 7.3:+59820824 None:intergenic
AATTCCGAAGATACCCTTCT+TGG 0.278051 7.3:-59820298 MS.gene82053:CDS
TTCCATATTGAAATTGATAA+TGG 0.285700 7.3:-59820826 MS.gene82053:CDS
GCTTCCCCATAGGAGAAATT+TGG 0.291304 7.3:+59820010 None:intergenic
AAATGCCTCCTTAAAATAAA+AGG 0.302232 7.3:+59819972 None:intergenic
GTAGGAGTGGTTTGTTGATT+TGG 0.323080 7.3:+59821029 None:intergenic
AGATATTGAAGATGCATCTA+TGG 0.323147 7.3:-59820802 MS.gene82053:CDS
GTATAAACTGAGCTTGGTTT+TGG 0.329115 7.3:+59820427 None:intergenic
GGAACACGCGCACGGGATAT+TGG 0.339508 7.3:-59820046 MS.gene82053:CDS
AATGGCGCCTAAGCAGAAAA+TGG 0.339684 7.3:-59820175 MS.gene82053:CDS
GAAGATACCCTTCTTGGATT+CGG 0.340738 7.3:-59820292 MS.gene82053:CDS
GTTTATACCTAACCCTAGTT+TGG 0.345137 7.3:-59820412 MS.gene82053:CDS
CAACAAGATGTTGAATTCAA+TGG 0.350188 7.3:-59820735 MS.gene82053:CDS
CTTGTGAAGAACTGAAATTA+GGG 0.351845 7.3:+59820541 None:intergenic
CAGCATCAACAACAATCAAT+TGG 0.353717 7.3:-59820489 MS.gene82053:CDS
AAGATACCCTTCTTGGATTC+GGG 0.361865 7.3:-59820291 MS.gene82053:CDS
TGTTTGGTGCAGAGGATTCC+TGG 0.364499 7.3:-59819124 MS.gene82053:CDS
TTTGCACTCCAGTCTTATTC+CGG 0.364854 7.3:-59819355 MS.gene82053:CDS
AGTTACCATTTGAAGAAATA+GGG 0.368741 7.3:+59820676 None:intergenic
CGGGTCAAGAGATGTTTCTT+AGG 0.388186 7.3:-59820272 MS.gene82053:CDS
ATCGGTAGAAGCGCCGCCTC+CGG 0.394887 7.3:+59820971 None:intergenic
CAATCACCAAATTTCTCCTA+TGG 0.395643 7.3:-59820016 MS.gene82053:CDS
ACTTATAGACGCCGGTAATC+CGG 0.404547 7.3:-59820067 MS.gene82053:CDS
CTTGACCCTATTTCTTCAAA+TGG 0.407880 7.3:-59820681 MS.gene82053:CDS
TTTCCTATGTATTCTTCAAA+AGG 0.413997 7.3:+59821203 None:intergenic
TTCTATCCTGCGAGCGCAAA+CGG 0.414907 7.3:+59819227 None:intergenic
AAATTTGCAAACTGCAGAAC+AGG 0.415407 7.3:+59819844 None:intergenic
TATGTATTCTTCAAAAGGTA+AGG 0.415901 7.3:+59821208 None:intergenic
GTGCGCGTGTTCCGGATTAC+CGG 0.417521 7.3:+59820056 None:intergenic
GGGAACCCTGGAAGCGGTGG+CGG 0.418143 7.3:-59820153 MS.gene82053:CDS
AATATCCCGTGCGCGTGTTC+CGG 0.422409 7.3:+59820048 None:intergenic
AAGATGTGGAATGGAGGATT+GGG 0.422443 7.3:-59820889 MS.gene82053:CDS
AAAACAAGCTTCTCAATTGT+CGG 0.427465 7.3:+59819253 None:intergenic
ATGGCGCCTAAGCAGAAAAT+GGG 0.428884 7.3:-59820174 MS.gene82053:CDS
AGAGTCGCAGGCAGAGTGTT+TGG 0.429838 7.3:-59819140 MS.gene82053:CDS
CTCAATTTCGTCGTGGTGTG+AGG 0.440067 7.3:+59819660 None:intergenic
TCGATCATCTGAAGGACATC+CGG 0.441979 7.3:+59819292 None:intergenic
TAATTTGAGAAAGAGCAAAT+AGG 0.442683 7.3:+59819493 None:intergenic
AGCTTGTGGTATGTTTCTGT+TGG 0.443296 7.3:+59820920 None:intergenic
ACTAGCCTCTTGCTCAAGAT+TGG 0.445518 7.3:-59819895 MS.gene82053:CDS
ATCTCATCTCGGTTTCAACT+TGG 0.447156 7.3:-59819042 MS.gene82053:CDS
AAAGATGTGGAATGGAGGAT+TGG 0.456441 7.3:-59820890 MS.gene82053:CDS
TTTGAAGAATACATAGGAAA+AGG 0.459740 7.3:-59821200 MS.gene82053:CDS
AGCAGCAGTAGCAGTGGTAG+TGG 0.460125 7.3:+59820617 None:intergenic
CTTTGCGACGGTGGTGCTAT+CGG 0.460730 7.3:+59820953 None:intergenic
TTCATCCCTCTACTACCAAA+AGG 0.463150 7.3:+59820576 None:intergenic
TCACAAGTTTCACTTTCTCA+TGG 0.465348 7.3:-59820525 MS.gene82053:CDS
GGTGCAGAGGATTCCTGGTA+GGG 0.470286 7.3:-59819119 MS.gene82053:CDS
TCGCAATCGCGTAGTGGCTG+CGG 0.474481 7.3:+59819535 None:intergenic
AAAATCATATGCTGAGGAAC+CGG 0.475265 7.3:+59819376 None:intergenic
TAAAAGGCAGCCCTTTGAAA+AGG 0.479249 7.3:+59819988 None:intergenic
AGGGAAAATTGTTGCTATGC+GGG 0.481377 7.3:-59821092 MS.gene82053:CDS
CGCAGGATAGAACACTTCCC+TGG 0.482072 7.3:-59819216 MS.gene82053:CDS
AGCACTAAAGGTAGGTATGA+AGG 0.484386 7.3:+59819469 None:intergenic
AGCTTCAAGCAATGCTTGGT+TGG 0.488113 7.3:+59819816 None:intergenic
GGTTAGGTATAAACTGAGCT+TGG 0.491230 7.3:+59820421 None:intergenic
AGCATCAACAACAATCAATT+GGG 0.491428 7.3:-59820488 MS.gene82053:CDS
TTTGGGCCGTTTGCGCTCGC+AGG 0.491743 7.3:-59819233 MS.gene82053:CDS
GCCTAAAATCGTCGTAACAT+TGG 0.494379 7.3:-59819425 MS.gene82053:CDS
ATCAAGTGATTCGAGCAAAC+CGG 0.496065 7.3:+59819336 None:intergenic
TGGTGCAGAGGATTCCTGGT+AGG 0.496504 7.3:-59819120 MS.gene82053:CDS
ACGCGATTGCGAAGCAGTTG+TGG 0.497464 7.3:-59819524 MS.gene82053:CDS
TCACACGGTAGCGCCGGAGG+CGG 0.497760 7.3:-59820984 MS.gene82053:CDS
ACAATGGTCTTCATTTATGC+AGG 0.504102 7.3:-59819740 MS.gene82053:CDS
ATCTTGAGCAAGAGGCTAGT+TGG 0.505941 7.3:+59819898 None:intergenic
CCATTGTCCTCTGCTGCAGA+TGG 0.506974 7.3:+59820193 None:intergenic
AATCACCAAATTTCTCCTAT+GGG 0.509811 7.3:-59820015 MS.gene82053:CDS
GAATCCAAGAAGGGTATCTT+CGG 0.510787 7.3:+59820294 None:intergenic
CGGTGGCGGCGAAGATGTAT+CGG 0.512246 7.3:-59820139 MS.gene82053:CDS
CGATCATCTGAAGGACATCC+GGG 0.514286 7.3:+59819293 None:intergenic
CCACAGCTTCAAGCAATGCT+TGG 0.518150 7.3:+59819812 None:intergenic
GTGCAGAGGATTCCTGGTAG+GGG 0.518621 7.3:-59819118 MS.gene82053:CDS
CTTCGCCGCCACCGCTTCCA+GGG 0.526440 7.3:+59820148 None:intergenic
AGAACTCACTTGTCTTGTGT+TGG 0.527376 7.3:-59819075 MS.gene82053:CDS
TCATCCCTCTACTACCAAAA+GGG 0.532544 7.3:+59820577 None:intergenic
TGTCTTGTGTTGGCATAGGA+AGG 0.534098 7.3:-59819065 MS.gene82053:CDS
ATGGGGAACCCTGGAAGCGG+TGG 0.534973 7.3:-59820156 MS.gene82053:CDS
GACAGTGTTGAGGATGAAGT+AGG 0.538311 7.3:+59821011 None:intergenic
CTCTTGACCCGAATCCAAGA+AGG 0.539089 7.3:+59820284 None:intergenic
CGAGCAAACCGGAATAAGAC+TGG 0.539561 7.3:+59819347 None:intergenic
GCACTAAAGGTAGGTATGAA+GGG 0.542279 7.3:+59819470 None:intergenic
TCCACATGGAATCCCCTACC+AGG 0.543648 7.3:+59819106 None:intergenic
GATATTGAAGATGCATCTAT+GGG 0.546979 7.3:-59820801 MS.gene82053:CDS
CGATAGCACCACCGTCGCAA+AGG 0.547990 7.3:-59820952 MS.gene82053:CDS
TAGTAACTTCACAGAGTCGC+AGG 0.548006 7.3:-59819152 MS.gene82053:CDS
AAGCACCAATCTTGAGCAAG+AGG 0.549041 7.3:+59819890 None:intergenic
CTTTGAAAAGGCTTCCCCAT+AGG 0.549307 7.3:+59820000 None:intergenic
CAAGTTTCACTTTCTCATGG+TGG 0.549648 7.3:-59820522 MS.gene82053:CDS
CCAAGCATTGCTTGAAGCTG+TGG 0.549842 7.3:-59819812 MS.gene82053:CDS
GCCTCCGGCGCTACCGTGTG+AGG 0.550488 7.3:+59820986 None:intergenic
TTGTGATCGAACGGATGCAC+CGG 0.554827 7.3:-59819395 MS.gene82053:CDS
TTCCTCACCATCTGCAGCAG+AGG 0.556566 7.3:-59820200 MS.gene82053:CDS
ATCGGCTCATCAGTTTCAGC+AGG 0.556576 7.3:-59820121 MS.gene82053:CDS
TGTTGAGGATGAAGTAGGAG+TGG 0.560505 7.3:+59821016 None:intergenic
TCAATTTCGTCGTGGTGTGA+GGG 0.560921 7.3:+59819661 None:intergenic
TTCACGAATCGAAGCACTAA+AGG 0.562327 7.3:+59819457 None:intergenic
GTCAAGAGATGTTTCTTAGG+AGG 0.562943 7.3:-59820269 MS.gene82053:CDS
AGGCAGAGTGTTTGGTGCAG+AGG 0.564913 7.3:-59819132 MS.gene82053:CDS
GAATGATCTTGATCTTGACT+TGG 0.565052 7.3:+59820846 None:intergenic
AAGCAGAAAATGGGGAACCC+TGG 0.568423 7.3:-59820165 MS.gene82053:CDS
TCCTCACACGGTAGCGCCGG+AGG 0.569283 7.3:-59820987 MS.gene82053:CDS
AAATCGTCGTAACATTGGAT+AGG 0.569644 7.3:-59819420 MS.gene82053:CDS
TCTTCCTCACACGGTAGCGC+CGG 0.570460 7.3:-59820990 MS.gene82053:CDS
GAGAATCTGAAGCAATATGC+TGG 0.570600 7.3:-59819622 MS.gene82053:CDS
TTATGCAGGAGTTAGCACTT+AGG 0.570667 7.3:-59819726 MS.gene82053:CDS
AATCTCAGCAGCAGTAGCAG+TGG 0.572943 7.3:+59820611 None:intergenic
GGTAATCCGGAACACGCGCA+CGG 0.575492 7.3:-59820054 MS.gene82053:CDS
GTCCTCTGCTGCAGATGGTG+AGG 0.576808 7.3:+59820198 None:intergenic
GAGGCTGAAGCTGAATCTCT+CGG 0.577024 7.3:+59820355 None:intergenic
CACTTGTCTTGTGTTGGCAT+AGG 0.578811 7.3:-59819069 MS.gene82053:CDS
AAAACCTACTCTTGTCATCA+GGG 0.582681 7.3:-59819192 MS.gene82053:CDS
GTAATCCGGAACACGCGCAC+GGG 0.591224 7.3:-59820053 MS.gene82053:CDS
ATTGTTATCCTTTGCGACGG+TGG 0.593780 7.3:+59820944 None:intergenic
AGTATTTCTCGATCATCTGA+AGG 0.598913 7.3:+59819284 None:intergenic
GGATAGGAGTTGTGATCGAA+CGG 0.600755 7.3:-59819404 MS.gene82053:CDS
ATGTATTCTTCAAAAGGTAA+GGG 0.601264 7.3:+59821209 None:intergenic
GCATAGGAAGGATCTCATCT+CGG 0.602088 7.3:-59819053 MS.gene82053:CDS
CGAATCGAAGCACTAAAGGT+AGG 0.602747 7.3:+59819461 None:intergenic
CCATCTGCAGCAGAGGACAA+TGG 0.604634 7.3:-59820193 MS.gene82053:CDS
TGAAGGTAAAAGATGTGGAA+TGG 0.609884 7.3:-59820898 MS.gene82053:CDS
AGTTCTGCTTCTTCTCCACA+TGG 0.609894 7.3:+59819092 None:intergenic
AAAATGGGGAACCCTGGAAG+CGG 0.610138 7.3:-59820159 MS.gene82053:CDS
TGCAGCTGAGAGTGTGTGAA+AGG 0.610994 7.3:+59820384 None:intergenic
GCATTGCTTGAAGCTGTGGA+TGG 0.611003 7.3:-59819808 MS.gene82053:CDS
GGTATTGTTATCCTTTGCGA+CGG 0.613378 7.3:+59820941 None:intergenic
CAAGCTGAAGGTAAAAGATG+TGG 0.613564 7.3:-59820903 MS.gene82053:CDS
ACGCGCACGGGATATTGGCG+CGG 0.617795 7.3:-59820041 MS.gene82053:CDS
AGGTAAAAGATGTGGAATGG+AGG 0.623374 7.3:-59820895 MS.gene82053:CDS
AGAACCCTGATGACAAGAGT+AGG 0.623547 7.3:+59819188 None:intergenic
CAGGAGTTAGCACTTAGGAA+TGG 0.623926 7.3:-59819721 MS.gene82053:CDS
TCTTGACCCGAATCCAAGAA+GGG 0.632079 7.3:+59820285 None:intergenic
ATCACCAAATTTCTCCTATG+GGG 0.632427 7.3:-59820014 MS.gene82053:CDS
TCAACACTGTCTTCCTCACA+CGG 0.633334 7.3:-59820999 MS.gene82053:CDS
TGGTTCATAACAAACTGATG+AGG 0.638887 7.3:+59820447 None:intergenic
TCCTGGTAGGGGATTCCATG+TGG 0.639151 7.3:-59819107 MS.gene82053:CDS
AGAAACATACCACAAGCTGA+AGG 0.641675 7.3:-59820915 MS.gene82053:CDS
ACTGCTTCGCAATCGCGTAG+TGG 0.643756 7.3:+59819529 None:intergenic
AATGCAGTGATCTTGAGTGC+AGG 0.644744 7.3:+59819691 None:intergenic
GAGTTAGCACTTAGGAATGG+TGG 0.645397 7.3:-59819718 MS.gene82053:CDS
GAGGGAAAATTGTTGCTATG+CGG 0.647727 7.3:-59821093 MS.gene82053:CDS
CCAGCTAAAAGACTCAATTG+TGG 0.675226 7.3:-59820333 MS.gene82053:CDS
GTGAAGTTACTAAACGTCAA+CGG 0.678122 7.3:+59819163 None:intergenic
TGTTAGTGTCAATGTCCACC+CGG 0.680851 7.3:-59819311 MS.gene82053:CDS
TGGCGCCTAAGCAGAAAATG+GGG 0.686084 7.3:-59820173 MS.gene82053:CDS
GCTGCAGAACTTATAGACGC+CGG 0.689078 7.3:-59820075 MS.gene82053:CDS
AACTGAGCTCAATTTCGTCG+TGG 0.691423 7.3:+59819653 None:intergenic
TCATCTGAAGGACATCCGGG+TGG 0.719806 7.3:+59819296 None:intergenic
GTGTGAGGAAGACAGTGTTG+AGG 0.783398 7.3:+59821001 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CATATAATAGATTTTGATAT+TGG - chr7.3:59820482-59820501 MS.gene82053:CDS 15.0%
!! TTCCATATTGAAATTGATAA+TGG - chr7.3:59819428-59819447 MS.gene82053:CDS 20.0%
!! TTCCATTATCAATTTCAATA+TGG + chr7.3:59819433-59819452 None:intergenic 20.0%
!!! ATAGATTTTGATATTGGTTT+TGG - chr7.3:59820488-59820507 MS.gene82053:CDS 20.0%
!!! ATTCAATGGTTTTAGTTTTA+TGG - chr7.3:59819533-59819552 MS.gene82053:CDS 20.0%
! AAATGCCTCCTTAAAATAAA+AGG + chr7.3:59820285-59820304 None:intergenic 25.0%
! AAGTTACCATTTGAAGAAAT+AGG + chr7.3:59819582-59819601 None:intergenic 25.0%
! AGTTACCATTTGAAGAAATA+GGG + chr7.3:59819581-59819600 None:intergenic 25.0%
! ATGTATTCTTCAAAAGGTAA+GGG + chr7.3:59819048-59819067 None:intergenic 25.0%
! TAATTTGAGAAAGAGCAAAT+AGG + chr7.3:59820764-59820783 None:intergenic 25.0%
! TATGTATTCTTCAAAAGGTA+AGG + chr7.3:59819049-59819068 None:intergenic 25.0%
! TCAAAAACAACAACAGAATT+GGG + chr7.3:59819195-59819214 None:intergenic 25.0%
! TTTCCTATGTATTCTTCAAA+AGG + chr7.3:59819054-59819073 None:intergenic 25.0%
! TTTGAAGAATACATAGGAAA+AGG - chr7.3:59819054-59819073 MS.gene82053:CDS 25.0%
!! TATAATTGATCAGCTTTTCA+AGG - chr7.3:59820157-59820176 MS.gene82053:CDS 25.0%
!!! TTACCTTTTGAAGAATACAT+AGG - chr7.3:59819048-59819067 MS.gene82053:CDS 25.0%
!!! TTTGTTGATTTGGTTTTTTG+AGG + chr7.3:59819218-59819237 None:intergenic 25.0%
AAAACAAGCTTCTCAATTGT+CGG + chr7.3:59821004-59821023 None:intergenic 30.0%
AATCACCAAATTTCTCCTAT+GGG - chr7.3:59820239-59820258 MS.gene82053:CDS 30.0%
ACTTGTGAAGAACTGAAATT+AGG + chr7.3:59819717-59819736 None:intergenic 30.0%
AGATATTGAAGATGCATCTA+TGG - chr7.3:59819452-59819471 MS.gene82053:CDS 30.0%
AGCATCAACAACAATCAATT+GGG - chr7.3:59819766-59819785 MS.gene82053:CDS 30.0%
CAACAAGATGTTGAATTCAA+TGG - chr7.3:59819519-59819538 MS.gene82053:CDS 30.0%
CTTGTGAAGAACTGAAATTA+GGG + chr7.3:59819716-59819735 None:intergenic 30.0%
GATATTGAAGATGCATCTAT+GGG - chr7.3:59819453-59819472 MS.gene82053:CDS 30.0%
GTCAAAAACAACAACAGAAT+TGG + chr7.3:59819196-59819215 None:intergenic 30.0%
TGAAAGGAAAAACCAAACTA+GGG + chr7.3:59819857-59819876 None:intergenic 30.0%
! ATTTGTTCTGATTTCCCTTT+TGG - chr7.3:59819663-59819682 MS.gene82053:CDS 30.0%
! TTAAGCAAGCTTTTACAAGT+TGG - chr7.3:59819477-59819496 MS.gene82053:CDS 30.0%
!! ACAATTGAGAAGCTTGTTTT+GGG - chr7.3:59821004-59821023 MS.gene82053:CDS 30.0%
!!! GATTTTGATATTGGTTTTGG+CGG - chr7.3:59820491-59820510 MS.gene82053:CDS 30.0%
AAAAACCTACTCTTGTCATC+AGG - chr7.3:59821061-59821080 MS.gene82053:CDS 35.0%
AAAACCTACTCTTGTCATCA+GGG - chr7.3:59821062-59821081 MS.gene82053:CDS 35.0%
AAAATCATATGCTGAGGAAC+CGG + chr7.3:59820881-59820900 None:intergenic 35.0%
AAATCGTCGTAACATTGGAT+AGG - chr7.3:59820834-59820853 MS.gene82053:CDS 35.0%
AAATTTGCAAACTGCAGAAC+AGG + chr7.3:59820413-59820432 None:intergenic 35.0%
ACAATGGTCTTCATTTATGC+AGG - chr7.3:59820514-59820533 MS.gene82053:CDS 35.0%
AGTATTTCTCGATCATCTGA+AGG + chr7.3:59820973-59820992 None:intergenic 35.0%
AGTCTCTGAATTCTGTTTCA+TGG - chr7.3:59820696-59820715 MS.gene82053:CDS 35.0%
AGTGCAAAAATCATATGCTG+AGG + chr7.3:59820887-59820906 None:intergenic 35.0%
ATCACCAAATTTCTCCTATG+GGG - chr7.3:59820240-59820259 MS.gene82053:CDS 35.0%
CAATCACCAAATTTCTCCTA+TGG - chr7.3:59820238-59820257 MS.gene82053:CDS 35.0%
CAGCATCAACAACAATCAAT+TGG - chr7.3:59819765-59819784 MS.gene82053:CDS 35.0%
GAATGATCTTGATCTTGACT+TGG + chr7.3:59819411-59819430 None:intergenic 35.0%
GTGAAAGGAAAAACCAAACT+AGG + chr7.3:59819858-59819877 None:intergenic 35.0%
GTGAAGTTACTAAACGTCAA+CGG + chr7.3:59821094-59821113 None:intergenic 35.0%
GTTTATACCTAACCCTAGTT+TGG - chr7.3:59819842-59819861 MS.gene82053:CDS 35.0%
TCACAAGTTTCACTTTCTCA+TGG - chr7.3:59819729-59819748 MS.gene82053:CDS 35.0%
TGAAGGTAAAAGATGTGGAA+TGG - chr7.3:59819356-59819375 MS.gene82053:CDS 35.0%
TGGTTCATAACAAACTGATG+AGG + chr7.3:59819810-59819829 None:intergenic 35.0%
! AAGAACAGTTTTTGCAAAGG+TGG - chr7.3:59819139-59819158 MS.gene82053:CDS 35.0%
! AGCAAGAACAGTTTTTGCAA+AGG - chr7.3:59819136-59819155 MS.gene82053:CDS 35.0%
! CTTGACCCTATTTCTTCAAA+TGG - chr7.3:59819573-59819592 MS.gene82053:CDS 35.0%
! GTATAAACTGAGCTTGGTTT+TGG + chr7.3:59819830-59819849 None:intergenic 35.0%
! TCCAATGTTACGACGATTTT+AGG + chr7.3:59820833-59820852 None:intergenic 35.0%
!! ATTTCCCTTTTGGTAGTAGA+GGG - chr7.3:59819673-59819692 MS.gene82053:CDS 35.0%
!! GACAATTGAGAAGCTTGTTT+TGG - chr7.3:59821003-59821022 MS.gene82053:CDS 35.0%
!! GGAAAAGGTGTGTTAGATTT+TGG - chr7.3:59819069-59819088 MS.gene82053:CDS 35.0%
!!! AAGGGCTGCCTTTTATTTTA+AGG - chr7.3:59820274-59820293 MS.gene82053:CDS 35.0%
AAAGATGTGGAATGGAGGAT+TGG - chr7.3:59819364-59819383 MS.gene82053:CDS 40.0%
AAGATACCCTTCTTGGATTC+GGG - chr7.3:59819963-59819982 MS.gene82053:CDS 40.0%
AAGATGTGGAATGGAGGATT+GGG - chr7.3:59819365-59819384 MS.gene82053:CDS 40.0%
AATTCCGAAGATACCCTTCT+TGG - chr7.3:59819956-59819975 MS.gene82053:CDS 40.0%
AGAAACATACCACAAGCTGA+AGG - chr7.3:59819339-59819358 MS.gene82053:CDS 40.0%
AGAACTCACTTGTCTTGTGT+TGG - chr7.3:59821179-59821198 MS.gene82053:CDS 40.0%
AGCACTAAAGGTAGGTATGA+AGG + chr7.3:59820788-59820807 None:intergenic 40.0%
AGGGAAAATTGTTGCTATGC+GGG - chr7.3:59819162-59819181 MS.gene82053:CDS 40.0%
AGGTAAAAGATGTGGAATGG+AGG - chr7.3:59819359-59819378 MS.gene82053:CDS 40.0%
ATCAAGTGATTCGAGCAAAC+CGG + chr7.3:59820921-59820940 None:intergenic 40.0%
ATCTCATCTCGGTTTCAACT+TGG - chr7.3:59821212-59821231 MS.gene82053:CDS 40.0%
CAAGCTGAAGGTAAAAGATG+TGG - chr7.3:59819351-59819370 MS.gene82053:CDS 40.0%
CAAGTTTCACTTTCTCATGG+TGG - chr7.3:59819732-59819751 MS.gene82053:CDS 40.0%
CCAGCTAAAAGACTCAATTG+TGG - chr7.3:59819921-59819940 MS.gene82053:CDS 40.0%
GAAGATACCCTTCTTGGATT+CGG - chr7.3:59819962-59819981 MS.gene82053:CDS 40.0%
GAGGGAAAATTGTTGCTATG+CGG - chr7.3:59819161-59819180 MS.gene82053:CDS 40.0%
GCACTAAAGGTAGGTATGAA+GGG + chr7.3:59820787-59820806 None:intergenic 40.0%
GCCTAAAATCGTCGTAACAT+TGG - chr7.3:59820829-59820848 MS.gene82053:CDS 40.0%
GGAAAAACCAAACTAGGGTT+AGG + chr7.3:59819852-59819871 None:intergenic 40.0%
GGTATTGTTATCCTTTGCGA+CGG + chr7.3:59819316-59819335 None:intergenic 40.0%
GGTTAGGTATAAACTGAGCT+TGG + chr7.3:59819836-59819855 None:intergenic 40.0%
GTCAAGAGATGTTTCTTAGG+AGG - chr7.3:59819985-59820004 MS.gene82053:CDS 40.0%
TCATCCCTCTACTACCAAAA+GGG + chr7.3:59819680-59819699 None:intergenic 40.0%
TTATGCAGGAGTTAGCACTT+AGG - chr7.3:59820528-59820547 MS.gene82053:CDS 40.0%
TTCATCCCTCTACTACCAAA+AGG + chr7.3:59819681-59819700 None:intergenic 40.0%
! AACAGTTTTTGCAAAGGTGG+AGG - chr7.3:59819142-59819161 MS.gene82053:CDS 40.0%
! ACAGTTTTTGCAAAGGTGGA+GGG - chr7.3:59819143-59819162 MS.gene82053:CDS 40.0%
! AGCTTGTGGTATGTTTCTGT+TGG + chr7.3:59819337-59819356 None:intergenic 40.0%
! CATCTTTTACCTTCAGCTTG+TGG + chr7.3:59819351-59819370 None:intergenic 40.0%
! CCACAATTGAGTCTTTTAGC+TGG + chr7.3:59819924-59819943 None:intergenic 40.0%
! GACAAGAGTAGGTTTTTCCA+GGG + chr7.3:59821058-59821077 None:intergenic 40.0%
! GAGAATCTGAAGCAATATGC+TGG - chr7.3:59820632-59820651 MS.gene82053:CDS 40.0%
! TAAAAGGCAGCCCTTTGAAA+AGG + chr7.3:59820269-59820288 None:intergenic 40.0%
! TATGGGGAAGCCTTTTCAAA+GGG - chr7.3:59820256-59820275 MS.gene82053:CDS 40.0%
! TGACAAGAGTAGGTTTTTCC+AGG + chr7.3:59821059-59821078 None:intergenic 40.0%
! TTCACGAATCGAAGCACTAA+AGG + chr7.3:59820800-59820819 None:intergenic 40.0%
!! CAATTGAGTCTTTTAGCTGG+AGG + chr7.3:59819921-59819940 None:intergenic 40.0%
!! GAATCCAAGAAGGGTATCTT+CGG + chr7.3:59819963-59819982 None:intergenic 40.0%
!! GATTTCCCTTTTGGTAGTAG+AGG - chr7.3:59819672-59819691 MS.gene82053:CDS 40.0%
!! GTAGGAGTGGTTTGTTGATT+TGG + chr7.3:59819228-59819247 None:intergenic 40.0%
!! TTTGCACTCCAGTCTTATTC+CGG - chr7.3:59820899-59820918 MS.gene82053:CDS 40.0%
!!! ATATTGGTTTTGGCGGACAA+TGG - chr7.3:59820498-59820517 MS.gene82053:CDS 40.0%
!!! GGCTGCCTTTTATTTTAAGG+AGG - chr7.3:59820277-59820296 MS.gene82053:CDS 40.0%
AACTGAGCTCAATTTCGTCG+TGG + chr7.3:59820604-59820623 None:intergenic 45.0%
AAGCACCAATCTTGAGCAAG+AGG + chr7.3:59820367-59820386 None:intergenic 45.0%
AATGCAGTGATCTTGAGTGC+AGG + chr7.3:59820566-59820585 None:intergenic 45.0%
AATGGCGCCTAAGCAGAAAA+TGG - chr7.3:59820079-59820098 MS.gene82053:CDS 45.0%
ACTTATAGACGCCGGTAATC+CGG - chr7.3:59820187-59820206 MS.gene82053:CDS 45.0%
AGAACCCTGATGACAAGAGT+AGG + chr7.3:59821069-59821088 None:intergenic 45.0%
AGCTTCAAGCAATGCTTGGT+TGG + chr7.3:59820441-59820460 None:intergenic 45.0%
AGTTCTGCTTCTTCTCCACA+TGG + chr7.3:59821165-59821184 None:intergenic 45.0%
ATCTTGAGCAAGAGGCTAGT+TGG + chr7.3:59820359-59820378 None:intergenic 45.0%
ATGGCGCCTAAGCAGAAAAT+GGG - chr7.3:59820080-59820099 MS.gene82053:CDS 45.0%
ATTGTTATCCTTTGCGACGG+TGG + chr7.3:59819313-59819332 None:intergenic 45.0%
CAGGAGTTAGCACTTAGGAA+TGG - chr7.3:59820533-59820552 MS.gene82053:CDS 45.0%
CGGGTCAAGAGATGTTTCTT+AGG - chr7.3:59819982-59820001 MS.gene82053:CDS 45.0%
GAGTTAGCACTTAGGAATGG+TGG - chr7.3:59820536-59820555 MS.gene82053:CDS 45.0%
GCATAGGAAGGATCTCATCT+CGG - chr7.3:59821201-59821220 MS.gene82053:CDS 45.0%
GCTTCCCCATAGGAGAAATT+TGG + chr7.3:59820247-59820266 None:intergenic 45.0%
GGATAGGAGTTGTGATCGAA+CGG - chr7.3:59820850-59820869 MS.gene82053:CDS 45.0%
TAGTAACTTCACAGAGTCGC+AGG - chr7.3:59821102-59821121 MS.gene82053:CDS 45.0%
TCAACACTGTCTTCCTCACA+CGG - chr7.3:59819255-59819274 MS.gene82053:CDS 45.0%
TCAATTTCGTCGTGGTGTGA+GGG + chr7.3:59820596-59820615 None:intergenic 45.0%
TCGATCATCTGAAGGACATC+CGG + chr7.3:59820965-59820984 None:intergenic 45.0%
TCTTGACCCGAATCCAAGAA+GGG + chr7.3:59819972-59819991 None:intergenic 45.0%
TGTTAGTGTCAATGTCCACC+CGG - chr7.3:59820943-59820962 MS.gene82053:CDS 45.0%
TGTTGAGGATGAAGTAGGAG+TGG + chr7.3:59819241-59819260 None:intergenic 45.0%
! ACTAGCCTCTTGCTCAAGAT+TGG - chr7.3:59820359-59820378 MS.gene82053:CDS 45.0%
! CACTTGTCTTGTGTTGGCAT+AGG - chr7.3:59821185-59821204 MS.gene82053:CDS 45.0%
! CGAATCGAAGCACTAAAGGT+AGG + chr7.3:59820796-59820815 None:intergenic 45.0%
! CTATGGGGAAGCCTTTTCAA+AGG - chr7.3:59820255-59820274 MS.gene82053:CDS 45.0%
! CTTTGAAAAGGCTTCCCCAT+AGG + chr7.3:59820257-59820276 None:intergenic 45.0%
! GACAGTGTTGAGGATGAAGT+AGG + chr7.3:59819246-59819265 None:intergenic 45.0%
! TGTCTTGTGTTGGCATAGGA+AGG - chr7.3:59821189-59821208 MS.gene82053:CDS 45.0%
AAAATGGGGAACCCTGGAAG+CGG - chr7.3:59820095-59820114 MS.gene82053:CDS 50.0%
AAGCAGAAAATGGGGAACCC+TGG - chr7.3:59820089-59820108 MS.gene82053:CDS 50.0%
AATCTCAGCAGCAGTAGCAG+TGG + chr7.3:59819646-59819665 None:intergenic 50.0%
CCACAGCTTCAAGCAATGCT+TGG + chr7.3:59820445-59820464 None:intergenic 50.0%
CGAGCAAACCGGAATAAGAC+TGG + chr7.3:59820910-59820929 None:intergenic 50.0%
CGATCATCTGAAGGACATCC+GGG + chr7.3:59820964-59820983 None:intergenic 50.0%
CTCAATTTCGTCGTGGTGTG+AGG + chr7.3:59820597-59820616 None:intergenic 50.0%
CTCTTGACCCGAATCCAAGA+AGG + chr7.3:59819973-59819992 None:intergenic 50.0%
GAGGCTGAAGCTGAATCTCT+CGG + chr7.3:59819902-59819921 None:intergenic 50.0%
GCATTGCTTGAAGCTGTGGA+TGG - chr7.3:59820446-59820465 MS.gene82053:CDS 50.0%
GCTGCAGAACTTATAGACGC+CGG - chr7.3:59820179-59820198 MS.gene82053:CDS 50.0%
GTGTGAGGAAGACAGTGTTG+AGG + chr7.3:59819256-59819275 None:intergenic 50.0%
TGGCGCCTAAGCAGAAAATG+GGG - chr7.3:59820081-59820100 MS.gene82053:CDS 50.0%
TTCTATCCTGCGAGCGCAAA+CGG + chr7.3:59821030-59821049 None:intergenic 50.0%
TTGTGATCGAACGGATGCAC+CGG - chr7.3:59820859-59820878 MS.gene82053:CDS 50.0%
! ATCGGCTCATCAGTTTCAGC+AGG - chr7.3:59820133-59820152 MS.gene82053:CDS 50.0%
! CCAAGCATTGCTTGAAGCTG+TGG - chr7.3:59820442-59820461 MS.gene82053:CDS 50.0%
! GGGTTCCCCATTTTCTGCTT+AGG + chr7.3:59820089-59820108 None:intergenic 50.0%
! TGCAGCTGAGAGTGTGTGAA+AGG + chr7.3:59819873-59819892 None:intergenic 50.0%
!! TGTTTGGTGCAGAGGATTCC+TGG - chr7.3:59821130-59821149 MS.gene82053:CDS 50.0%
AATATCCCGTGCGCGTGTTC+CGG + chr7.3:59820209-59820228 None:intergenic 55.0%
ACGCGATTGCGAAGCAGTTG+TGG - chr7.3:59820730-59820749 MS.gene82053:CDS 55.0%
ACTGCTTCGCAATCGCGTAG+TGG + chr7.3:59820728-59820747 None:intergenic 55.0%
AGCAGCAGTAGCAGTGGTAG+TGG + chr7.3:59819640-59819659 None:intergenic 55.0%
CCATCTGCAGCAGAGGACAA+TGG - chr7.3:59820061-59820080 MS.gene82053:CDS 55.0%
CCATTGTCCTCTGCTGCAGA+TGG + chr7.3:59820064-59820083 None:intergenic 55.0%
CGCAGGATAGAACACTTCCC+TGG - chr7.3:59821038-59821057 MS.gene82053:CDS 55.0%
GGTGCAGAGGATTCCTGGTA+GGG - chr7.3:59821135-59821154 MS.gene82053:CDS 55.0%
GTGCAGAGGATTCCTGGTAG+GGG - chr7.3:59821136-59821155 MS.gene82053:CDS 55.0%
TCATCTGAAGGACATCCGGG+TGG + chr7.3:59820961-59820980 None:intergenic 55.0%
TCCACATGGAATCCCCTACC+AGG + chr7.3:59821151-59821170 None:intergenic 55.0%
TCCTGGTAGGGGATTCCATG+TGG - chr7.3:59821147-59821166 MS.gene82053:CDS 55.0%
TGGTGCAGAGGATTCCTGGT+AGG - chr7.3:59821134-59821153 MS.gene82053:CDS 55.0%
TTCCTCACCATCTGCAGCAG+AGG - chr7.3:59820054-59820073 MS.gene82053:CDS 55.0%
! AGAGTCGCAGGCAGAGTGTT+TGG - chr7.3:59821114-59821133 MS.gene82053:CDS 55.0%
!! AGGCAGAGTGTTTGGTGCAG+AGG - chr7.3:59821122-59821141 MS.gene82053:CDS 55.0%
!! CTTTGCGACGGTGGTGCTAT+CGG + chr7.3:59819304-59819323 None:intergenic 55.0%
CGATAGCACCACCGTCGCAA+AGG - chr7.3:59819302-59819321 MS.gene82053:CDS 60.0%
GGAACACGCGCACGGGATAT+TGG - chr7.3:59820208-59820227 MS.gene82053:CDS 60.0%
GGTAATCCGGAACACGCGCA+CGG - chr7.3:59820200-59820219 MS.gene82053:CDS 60.0%
GTAATCCGGAACACGCGCAC+GGG - chr7.3:59820201-59820220 MS.gene82053:CDS 60.0%
GTCCTCTGCTGCAGATGGTG+AGG + chr7.3:59820059-59820078 None:intergenic 60.0%
GTGCGCGTGTTCCGGATTAC+CGG + chr7.3:59820201-59820220 None:intergenic 60.0%
TCGCAATCGCGTAGTGGCTG+CGG + chr7.3:59820722-59820741 None:intergenic 60.0%
TCTTCCTCACACGGTAGCGC+CGG - chr7.3:59819264-59819283 MS.gene82053:CDS 60.0%
! CGGTGGCGGCGAAGATGTAT+CGG - chr7.3:59820115-59820134 MS.gene82053:CDS 60.0%
ACGCGCACGGGATATTGGCG+CGG - chr7.3:59820213-59820232 MS.gene82053:CDS 65.0%
ATGGGGAACCCTGGAAGCGG+TGG - chr7.3:59820098-59820117 MS.gene82053:CDS 65.0%
TTTGGGCCGTTTGCGCTCGC+AGG - chr7.3:59821021-59821040 MS.gene82053:CDS 65.0%
!! ATCGGTAGAAGCGCCGCCTC+CGG + chr7.3:59819286-59819305 None:intergenic 65.0%
CTTCGCCGCCACCGCTTCCA+GGG + chr7.3:59820109-59820128 None:intergenic 70.0%
GGGAACCCTGGAAGCGGTGG+CGG - chr7.3:59820101-59820120 MS.gene82053:CDS 70.0%
TCTTCGCCGCCACCGCTTCC+AGG + chr7.3:59820110-59820129 None:intergenic 70.0%
! TCACACGGTAGCGCCGGAGG+CGG - chr7.3:59819270-59819289 MS.gene82053:CDS 70.0%
! TCCTCACACGGTAGCGCCGG+AGG - chr7.3:59819267-59819286 MS.gene82053:CDS 70.0%
GCCTCCGGCGCTACCGTGTG+AGG + chr7.3:59819271-59819290 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 59819033 59821243 59819033 ID=MS.gene82053
chr7.3 mRNA 59819033 59821243 59819033 ID=MS.gene82053.t1;Parent=MS.gene82053
chr7.3 exon 59819033 59821243 59819033 ID=MS.gene82053.t1.exon1;Parent=MS.gene82053.t1
chr7.3 CDS 59819033 59821243 59819033 ID=cds.MS.gene82053.t1;Parent=MS.gene82053.t1
Gene Sequence

>MS.gene82053

ATGAAGGCTATGCCCTTACCTTTTGAAGAATACATAGGAAAAGGTGTGTTAGATTTTGGTTCAAGTGTTGTTGCTTCTTCAGATTCATATTTGTTTTCACAACAGCAAGAACAGTTTTTGCAAAGGTGGAGGGAAAATTGTTGCTATGCGGGCATTGAGCCCAATTCTGTTGTTGTTTTTGACCTCAAAAAACCAAATCAACAAACCACTCCTACTTCATCCTCAACACTGTCTTCCTCACACGGTAGCGCCGGAGGCGGCGCTTCTACCGATAGCACCACCGTCGCAAAGGATAACAATACCAACAGAAACATACCACAAGCTGAAGGTAAAAGATGTGGAATGGAGGATTGGGAGAGTGTGTTATCTGAATCACCAAGTCAAGATCAAGATCATTCCATATTGAAATTGATAATGGAAGATATTGAAGATGCATCTATGGGATTAAGCAAGCTTTTACAAGTTGGAACTAGTAATTCTCATTCTCAACAAGATGTTGAATTCAATGGTTTTAGTTTTATGGATCAACAAAGTTCTGTACTTGACCCTATTTCTTCAAATGGTAACTTTGTAACTAGCATTGATTCTTCTTCTGTTGTTGCTACCACTACCACTGCTACTGCTGCTGAGATTTGTTCTGATTTCCCTTTTGGTAGTAGAGGGATGAATCAAATTCAAAACCCTAATTTCAGTTCTTCACAAGTTTCACTTTCTCATGGTGGTTTGTTTCATCAGCATCAACAACAATCAATTGGGTCTCTTGATGAGAAGCTACCTCATCAGTTTGTTATGAACCAAAACCAAGCTCAGTTTATACCTAACCCTAGTTTGGTTTTTCCTTTCACACACTCTCAGCTGCAAGAAAACCGAGAGATTCAGCTTCAGCCTCCAGCTAAAAGACTCAATTGTGGAACAAATTATGAAATTCCGAAGATACCCTTCTTGGATTCGGGTCAAGAGATGTTTCTTAGGAGGCAACAACAGCATCAGCAACAGCAACATCAGCAGCAGCTTCAACTGCTTCCTCACCATCTGCAGCAGAGGACAATGGCGCCTAAGCAGAAAATGGGGAACCCTGGAAGCGGTGGCGGCGAAGATGTATCGGCTCATCAGTTTCAGCAGGCTATAATTGATCAGCTTTTCAAGGCTGCAGAACTTATAGACGCCGGTAATCCGGAACACGCGCACGGGATATTGGCGCGGCTCAATCACCAAATTTCTCCTATGGGGAAGCCTTTTCAAAGGGCTGCCTTTTATTTTAAGGAGGCATTTCAATTGCTTCTTCAATCAAATGTCAACAACAGCAACAACAACAGCTTTTCACCAACTAGCCTCTTGCTCAAGATTGGTGCTTATAAATCATTCTCAGAAATCTCACCTGTTCTGCAGTTTGCAAATTTCACTTCCAACCAAGCATTGCTTGAAGCTGTGGATGGTTTCGATCGAATTCATATAATAGATTTTGATATTGGTTTTGGCGGACAATGGTCTTCATTTATGCAGGAGTTAGCACTTAGGAATGGTGGTGCACCTGCACTCAAGATCACTGCATTTGTTTCGCCCTCACACCACGACGAAATTGAGCTCAGTTTCACTAACGAGAATCTGAAGCAATATGCTGGTGAAATTAACATGTCATTTGAGCTCGAGATTCTGACACTTGAGTCTCTGAATTCTGTTTCATGGCCGCAGCCACTACGCGATTGCGAAGCAGTTGTGGTTAACTTGCCTATTTGCTCTTTCTCAAATTACCCTTCATACCTACCTTTAGTGCTTCGATTCGTGAAGCAGCTCATGCCTAAAATCGTCGTAACATTGGATAGGAGTTGTGATCGAACGGATGCACCGGTTCCTCAGCATATGATTTTTGCACTCCAGTCTTATTCCGGTTTGCTCGAATCACTTGATGCTGTTAGTGTCAATGTCCACCCGGATGTCCTTCAGATGATCGAGAAATACTATCTTCAACCGACAATTGAGAAGCTTGTTTTGGGCCGTTTGCGCTCGCAGGATAGAACACTTCCCTGGAAAAACCTACTCTTGTCATCAGGGTTCTCGCCGTTGACGTTTAGTAACTTCACAGAGTCGCAGGCAGAGTGTTTGGTGCAGAGGATTCCTGGTAGGGGATTCCATGTGGAGAAGAAGCAGAACTCACTTGTCTTGTGTTGGCATAGGAAGGATCTCATCTCGGTTTCAACTTGGAGATGCTGA
Protein sequence

>MS.gene82053.t1

MKAMPLPFEEYIGKGVLDFGSSVVASSDSYLFSQQQEQFLQRWRENCCYAGIEPNSVVVFDLKKPNQQTTPTSSSTLSSSHGSAGGGASTDSTTVAKDNNTNRNIPQAEGKRCGMEDWESVLSESPSQDQDHSILKLIMEDIEDASMGLSKLLQVGTSNSHSQQDVEFNGFSFMDQQSSVLDPISSNGNFVTSIDSSSVVATTTTATAAEICSDFPFGSRGMNQIQNPNFSSSQVSLSHGGLFHQHQQQSIGSLDEKLPHQFVMNQNQAQFIPNPSLVFPFTHSQLQENREIQLQPPAKRLNCGTNYEIPKIPFLDSGQEMFLRRQQQHQQQQHQQQLQLLPHHLQQRTMAPKQKMGNPGSGGGEDVSAHQFQQAIIDQLFKAAELIDAGNPEHAHGILARLNHQISPMGKPFQRAAFYFKEAFQLLLQSNVNNSNNNSFSPTSLLLKIGAYKSFSEISPVLQFANFTSNQALLEAVDGFDRIHIIDFDIGFGGQWSSFMQELALRNGGAPALKITAFVSPSHHDEIELSFTNENLKQYAGEINMSFELEILTLESLNSVSWPQPLRDCEAVVVNLPICSFSNYPSYLPLVLRFVKQLMPKIVVTLDRSCDRTDAPVPQHMIFALQSYSGLLESLDAVSVNVHPDVLQMIEKYYLQPTIEKLVLGRLRSQDRTLPWKNLLLSSGFSPLTFSNFTESQAECLVQRIPGRGFHVEKKQNSLVLCWHRKDLISVSTWRC