AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene82054

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene82054.t1 MTR_0092s0100 95.652 736 25 3 1 736 4 732 0.0 1437
MS.gene82054.t1 MTR_0092s0100 95.652 736 25 3 1 736 1 729 0.0 1436
MS.gene82054.t1 MTR_4g026485 53.321 542 189 13 210 736 133 625 2.32e-176 519
MS.gene82054.t1 MTR_0092s0060 94.118 187 9 1 1 187 1 185 1.82e-120 358
MS.gene82054.t1 MTR_8g077940 35.676 370 222 10 376 736 180 542 4.12e-60 212
MS.gene82054.t1 MTR_7g027190 28.182 440 261 13 323 736 264 674 3.82e-36 145
MS.gene82054.t1 MTR_3g065980 28.346 381 244 8 375 735 169 540 2.07e-34 139
MS.gene82054.t1 MTR_3g056110 26.075 372 259 6 377 735 174 542 3.74e-32 132
MS.gene82054.t1 MTR_5g058860 29.620 395 233 15 375 736 116 498 2.33e-29 123
MS.gene82054.t1 MTR_5g094450 25.401 374 259 7 379 735 162 532 6.17e-29 122
MS.gene82054.t1 MTR_4g076020 27.913 369 226 13 381 735 87 429 1.36e-28 119
MS.gene82054.t1 MTR_3g072710 27.363 402 235 16 375 736 117 501 3.00e-28 119
MS.gene82054.t1 MTR_4g077760 29.255 376 241 12 375 735 190 555 1.12e-27 118
MS.gene82054.t1 MTR_3g089055 27.297 370 253 7 379 735 199 565 1.52e-27 118
MS.gene82054.t1 MTR_3g089055 27.297 370 253 7 379 735 204 570 1.53e-27 118
MS.gene82054.t1 MTR_5g097480 24.302 358 249 9 394 735 193 544 3.02e-26 114
MS.gene82054.t1 MTR_2g082090 25.000 384 273 6 364 734 197 578 6.05e-26 113
MS.gene82054.t1 MTR_8g093070 26.738 374 252 9 372 734 133 495 7.75e-26 112
MS.gene82054.t1 MTR_7g074650 26.287 369 241 9 381 735 441 792 1.64e-25 113
MS.gene82054.t1 MTR_1g029420 26.471 374 251 10 379 735 226 592 5.19e-25 110
MS.gene82054.t1 MTR_4g133660 24.282 383 251 10 379 736 176 544 3.61e-24 107
MS.gene82054.t1 MTR_2g026250 24.802 379 258 10 377 736 227 597 4.77e-24 107
MS.gene82054.t1 MTR_5g019750 30.303 231 148 6 513 736 71 295 1.66e-23 102
MS.gene82054.t1 MTR_4g104020 25.515 388 251 13 375 736 146 521 2.56e-23 105
MS.gene82054.t1 MTR_4g102790 24.675 385 253 8 375 734 289 661 3.22e-22 102
MS.gene82054.t1 MTR_1g069725 28.232 379 235 16 375 736 106 464 4.52e-21 97.4
MS.gene82054.t1 MTR_4g097080 22.251 391 274 11 365 735 123 503 1.46e-19 93.2
MS.gene82054.t1 MTR_8g442410 23.057 386 260 10 375 735 152 525 3.70e-19 92.0
MS.gene82054.t1 MTR_2g034280 23.969 388 271 10 364 735 196 575 3.77e-19 92.4
MS.gene82054.t1 MTR_2g034260 24.416 385 262 11 374 735 206 584 1.78e-18 90.1
MS.gene82054.t1 MTR_2g034250 24.672 381 267 9 374 735 206 585 2.09e-18 90.1
MS.gene82054.t1 MTR_2g097473 23.607 377 254 11 379 734 290 653 2.59e-18 89.7
MS.gene82054.t1 MTR_7g109580 24.866 374 255 12 379 735 190 554 8.35e-18 87.8
MS.gene82054.t1 MTR_2g097390 24.798 371 258 9 379 734 276 640 1.10e-17 87.8
MS.gene82054.t1 MTR_4g064200 23.925 372 260 8 379 734 285 649 2.71e-17 86.7
MS.gene82054.t1 MTR_2g097310 23.560 382 249 8 379 734 273 637 4.78e-17 85.9
MS.gene82054.t1 MTR_2g097410 22.835 381 257 9 379 734 372 740 1.44e-16 84.3
MS.gene82054.t1 MTR_2g097463 22.193 374 263 8 379 734 291 654 2.70e-16 83.6
MS.gene82054.t1 MTR_4g064160 22.222 414 281 10 349 734 283 683 4.50e-16 82.8
MS.gene82054.t1 MTR_7g062120 21.429 378 266 5 379 735 373 740 5.04e-16 82.8
MS.gene82054.t1 MTR_2g097467 22.464 414 277 12 352 734 253 653 2.08e-15 80.5
MS.gene82054.t1 MTR_2g099110 22.193 383 230 10 397 735 93 451 2.26e-15 79.7
MS.gene82054.t1 MTR_2g097380 23.204 362 232 9 386 734 232 560 9.42e-15 78.2
MS.gene82054.t1 MTR_4g076140 33.721 172 103 3 355 517 19 188 9.76e-15 77.8
MS.gene82054.t1 MTR_2g089100 23.472 409 241 15 379 734 53 442 1.04e-14 77.8
MS.gene82054.t1 MTR_2g097350 24.800 375 253 12 379 734 275 639 1.12e-14 78.2
MS.gene82054.t1 MTR_4g064180 22.642 371 264 10 379 730 255 621 4.62e-14 76.3
MS.gene82054.t1 MTR_4g064150 22.133 375 269 8 379 734 362 732 1.35e-13 75.1
MS.gene82054.t1 MTR_5g009080 27.692 195 136 2 355 548 33 223 1.94e-13 73.9
MS.gene82054.t1 MTR_1g086970 23.892 406 267 17 359 735 86 478 2.60e-13 73.6
MS.gene82054.t1 MTR_4g064120 21.622 370 269 8 379 730 255 621 3.62e-13 73.6
MS.gene82054.t1 MTR_5g015490 21.212 396 253 10 379 735 115 490 4.40e-13 72.8
MS.gene82054.t1 MTR_3g022830 30.769 143 94 2 379 518 26 166 2.95e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene82054.t1 AT4G00150 55.919 397 144 10 343 736 187 555 1.18e-138 419
MS.gene82054.t1 AT2G45160 47.752 467 202 16 293 736 193 640 5.54e-120 374
MS.gene82054.t1 AT3G60630 44.094 508 203 16 272 736 154 623 1.05e-112 354
MS.gene82054.t1 AT4G36710 32.533 375 226 12 376 735 123 485 1.24e-54 196
MS.gene82054.t1 AT2G01570 29.380 371 242 8 375 735 221 581 3.12e-33 135
MS.gene82054.t1 AT5G17490 29.443 377 233 13 375 735 157 516 7.93e-32 130
MS.gene82054.t1 AT3G03450 27.321 377 247 10 375 735 180 545 1.46e-30 127
MS.gene82054.t1 AT5G66770 26.933 401 255 13 357 735 200 584 3.53e-30 126
MS.gene82054.t1 AT2G04890 26.005 373 247 8 379 735 54 413 6.81e-30 123
MS.gene82054.t1 AT1G14920 27.346 373 247 9 375 735 169 529 1.47e-29 124
MS.gene82054.t1 AT5G41920 24.190 401 282 8 341 735 16 400 6.77e-29 120
MS.gene82054.t1 AT3G54220 27.072 362 248 7 381 734 296 649 1.96e-28 122
MS.gene82054.t1 AT3G50650 28.883 367 233 10 388 735 185 542 3.22e-28 120
MS.gene82054.t1 AT1G66350 26.542 373 246 11 375 736 152 507 1.29e-27 118
MS.gene82054.t1 AT5G48150 23.720 371 266 7 379 735 123 490 1.35e-27 117
MS.gene82054.t1 AT5G48150 23.720 371 266 7 379 735 123 490 1.35e-27 117
MS.gene82054.t1 AT5G48150 23.720 371 266 7 379 735 123 490 1.35e-27 117
MS.gene82054.t1 AT5G48150 23.720 371 266 7 379 735 123 490 1.35e-27 117
MS.gene82054.t1 AT1G50600 23.925 372 263 7 379 735 160 526 3.47e-27 117
MS.gene82054.t1 AT4G17230 26.943 386 234 10 379 735 159 525 6.69e-27 116
MS.gene82054.t1 AT4G17230 26.943 386 234 10 379 735 159 525 6.69e-27 116
MS.gene82054.t1 AT4G08250 29.024 379 244 14 375 734 104 476 8.53e-27 115
MS.gene82054.t1 AT1G50600 23.925 372 263 7 379 735 235 601 1.03e-26 116
MS.gene82054.t1 AT1G50600 23.925 372 263 7 379 735 231 597 1.16e-26 115
MS.gene82054.t1 AT1G21450 25.000 412 270 11 352 735 193 593 1.41e-26 115
MS.gene82054.t1 AT5G59450 23.095 420 283 11 345 735 190 598 3.52e-21 99.0
MS.gene82054.t1 AT1G55580 24.390 328 221 6 424 735 129 445 6.42e-20 94.0
MS.gene82054.t1 AT1G63100 24.051 395 250 12 375 734 249 628 2.21e-19 93.2
MS.gene82054.t1 AT1G63100 24.051 395 250 12 375 734 274 653 2.26e-19 93.2
MS.gene82054.t1 AT1G07520 20.856 374 270 8 383 734 324 693 1.12e-17 88.2
MS.gene82054.t1 AT1G07520 20.856 374 270 8 383 734 323 692 1.19e-17 87.8
MS.gene82054.t1 AT1G07520 20.856 374 270 8 383 734 159 528 1.80e-17 86.7
MS.gene82054.t1 AT1G07520 20.856 374 270 8 383 734 159 528 1.80e-17 86.7
MS.gene82054.t1 AT1G07530 23.077 377 260 8 379 734 397 764 7.94e-17 85.5
MS.gene82054.t1 AT3G46600 22.449 392 275 10 367 735 194 579 8.78e-16 81.6
MS.gene82054.t1 AT3G46600 22.449 392 275 10 367 735 162 547 2.80e-15 80.1
MS.gene82054.t1 AT4G37650 22.308 390 263 10 379 735 147 529 3.57e-15 79.7
MS.gene82054.t1 AT3G46600 22.520 373 267 9 379 735 5 371 4.73e-15 78.2
MS.gene82054.t1 AT1G50420 29.101 189 125 4 375 558 54 238 1.92e-14 77.0
MS.gene82054.t1 AT5G52510 23.214 392 246 12 379 735 269 640 8.87e-14 75.5
MS.gene82054.t1 AT2G29065 21.485 377 273 7 379 734 253 627 6.75e-12 69.3

Find 151 sgRNAs with CRISPR-Local

Find 187 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTTGTGAAGAACTGAAATT+AGG 0.187840 7.3:+59808461 None:intergenic
GGAAAAGGTGTGTTAGATTT+TGG 0.194202 7.3:-59809103 MS.gene82054:CDS
TTGTTACCATTTGAAGAAAT+AGG 0.224501 7.3:+59808593 None:intergenic
GGCAATTGAGAAGCTTGTTT+TGG 0.238119 7.3:-59807169 MS.gene82054:CDS
AGTCTCTGAATTCTGTTTCA+TGG 0.261651 7.3:-59807476 MS.gene82054:CDS
ATTTGTTCTGATTTCCCTTT+TGG 0.265105 7.3:-59808512 MS.gene82054:CDS
TTCCATTATCAATTTCAATA+TGG 0.276508 7.3:+59808742 None:intergenic
AATTCCGAAGATACCCTTCT+TGG 0.278051 7.3:-59808219 MS.gene82054:CDS
TTCCATATTGAAATTGATAA+TGG 0.285700 7.3:-59808744 MS.gene82054:CDS
GCTTCCCCATAGGAGAAATT+TGG 0.291304 7.3:+59807931 None:intergenic
GCATAAACTGAGCTTGGTTT+TGG 0.318676 7.3:+59808348 None:intergenic
TCTTCGCCGCCACCACTTCC+AGG 0.321559 7.3:+59808068 None:intergenic
GTAGGAGTGGTTTGTTGATT+TGG 0.323080 7.3:+59808947 None:intergenic
AGATATTGAAGATGCATCTA+TGG 0.323147 7.3:-59808720 MS.gene82054:CDS
GTTTATGCCTAACCCTAGTT+TGG 0.334769 7.3:-59808333 MS.gene82054:CDS
GAAGATACCCTTCTTGGATT+CGG 0.340738 7.3:-59808213 MS.gene82054:CDS
AATGGCGCCTAAGCAGAAAA+TGG 0.344322 7.3:-59808096 MS.gene82054:CDS
GGAACACGCGCAAGGGATAT+TGG 0.347128 7.3:-59807967 MS.gene82054:CDS
CAACAAGATGTTGAATTCAA+TGG 0.350188 7.3:-59808653 MS.gene82054:CDS
CTTGTGAAGAACTGAAATTA+GGG 0.351845 7.3:+59808462 None:intergenic
CAGCATCAACAACAATCAAT+TGG 0.353717 7.3:-59808410 MS.gene82054:CDS
AAAACAAGCTTCTCAATTGC+CGG 0.355848 7.3:+59807171 None:intergenic
AAGATACCCTTCTTGGATTC+GGG 0.361865 7.3:-59808212 MS.gene82054:CDS
TGTTACCATTTGAAGAAATA+GGG 0.362144 7.3:+59808594 None:intergenic
TGTTTGGTGCAGAGGATTCC+TGG 0.364499 7.3:-59807042 MS.gene82054:CDS
TTTGCACTCCAGTCTTATTC+CGG 0.364854 7.3:-59807273 MS.gene82054:CDS
CGGGTCAAGAGATGTTTCTT+AGG 0.388186 7.3:-59808193 MS.gene82054:CDS
ATCGGTAGAAGCGCCGCCTC+CGG 0.394887 7.3:+59808889 None:intergenic
CAATCACCAAATTTCTCCTA+TGG 0.395643 7.3:-59807937 MS.gene82054:CDS
ACTTATAGACGCCGGTAATC+CGG 0.404547 7.3:-59807988 MS.gene82054:CDS
CTTGACCCTATTTCTTCAAA+TGG 0.407880 7.3:-59808599 MS.gene82054:CDS
AATATCCCTTGCGCGTGTTC+CGG 0.413029 7.3:+59807969 None:intergenic
TTTCCTATGTATTCTTCAAA+AGG 0.413997 7.3:+59809121 None:intergenic
AAATTTGCAAACTGCAGAAC+AGG 0.415407 7.3:+59807762 None:intergenic
TATGTATTCTTCAAAAGGTA+AGG 0.415901 7.3:+59809126 None:intergenic
AAGATGTGGAATGGAGGATT+GGG 0.422443 7.3:-59808807 MS.gene82054:CDS
TTGCGCGTGTTCCGGATTAC+CGG 0.426339 7.3:+59807977 None:intergenic
AGAGTCGCAGGCAGAGTGTT+TGG 0.429838 7.3:-59807058 MS.gene82054:CDS
ATGGCGCCTAAGCAGAAAAT+GGG 0.433521 7.3:-59808095 MS.gene82054:CDS
CCACAGCTTCAAGCAATGCT+TGG 0.439953 7.3:+59807730 None:intergenic
TAATTTGAGAAAGAGCAAAT+AGG 0.442683 7.3:+59807411 None:intergenic
AGCTTGTGGTATGTTTCTGT+TGG 0.443296 7.3:+59808838 None:intergenic
ACTAGCCTCTTGCTCAAGAT+TGG 0.445518 7.3:-59807813 MS.gene82054:CDS
TCGATCATCTGAAGTACATC+CGG 0.446716 7.3:+59807210 None:intergenic
ATCTCATCTCGGTTTCAACT+TGG 0.447156 7.3:-59806960 MS.gene82054:CDS
GGGAACCCTGGAAGTGGTGG+CGG 0.447345 7.3:-59808074 MS.gene82054:CDS
AAAGATGTGGAATGGAGGAT+TGG 0.456441 7.3:-59808808 MS.gene82054:CDS
TTTGAAGAATACATAGGAAA+AGG 0.459740 7.3:-59809118 MS.gene82054:CDS
GAGGCTGAAGCTGAATCTCT+TGG 0.460878 7.3:+59808276 None:intergenic
TTCATCCCTCTACTACCAAA+AGG 0.463150 7.3:+59808497 None:intergenic
TCACAAGTTTCACTTTCTCA+TGG 0.465348 7.3:-59808446 MS.gene82054:CDS
TTTGGGCCGTTTGGGTTCGC+AGG 0.468143 7.3:-59807151 MS.gene82054:CDS
GGTGCAGAGGATTCCTGGTA+GGG 0.470286 7.3:-59807037 MS.gene82054:CDS
ATCAAGTGATTCAAGCAAAC+CGG 0.470386 7.3:+59807254 None:intergenic
TCGCAATCGCGTAGTGGCTG+CGG 0.474481 7.3:+59807453 None:intergenic
GGTTAGGCATAAACTGAGCT+TGG 0.478491 7.3:+59808342 None:intergenic
TTCTATCCTGCGAACCCAAA+CGG 0.480883 7.3:+59807145 None:intergenic
AGGGAAAATTGTTGCTATGC+GGG 0.481377 7.3:-59809010 MS.gene82054:CDS
CTCGATTTCGTCGTGGTGTG+AGG 0.482198 7.3:+59807578 None:intergenic
CGCAGGATAGAACACTTCCT+TGG 0.483347 7.3:-59807134 MS.gene82054:CDS
GCCTAAAATTGTCGTAACAT+TGG 0.487648 7.3:-59807343 MS.gene82054:CDS
AGCTTCAAGCAATGCTTGGT+TGG 0.488113 7.3:+59807734 None:intergenic
CGCTTGTCTTGTGTTGGCAA+AGG 0.491242 7.3:-59806987 MS.gene82054:CDS
AGCATCAACAACAATCAATT+GGG 0.491428 7.3:-59808409 MS.gene82054:CDS
AGAATTCGCTTGTCTTGTGT+TGG 0.495542 7.3:-59806993 MS.gene82054:CDS
TGGTGCAGAGGATTCCTGGT+AGG 0.496504 7.3:-59807038 MS.gene82054:CDS
ACGCGATTGCGAAGCAGTTG+TGG 0.497464 7.3:-59807442 MS.gene82054:CDS
TCACACGGTAGCGCCGGAGG+CGG 0.497760 7.3:-59808902 MS.gene82054:CDS
CTTTGCGCCGGTGGTGCTAT+CGG 0.499180 7.3:+59808871 None:intergenic
ATCTTGAGCAAGAGGCTAGT+TGG 0.505941 7.3:+59807816 None:intergenic
AATCACCAAATTTCTCCTAT+GGG 0.509811 7.3:-59807936 MS.gene82054:CDS
GAATCCAAGAAGGGTATCTT+CGG 0.510787 7.3:+59808215 None:intergenic
CGAGAAATACTATCTGCAAC+CGG 0.516860 7.3:-59807190 MS.gene82054:CDS
ACAATGGTCTTCATTTATGC+AGG 0.517675 7.3:-59807658 MS.gene82054:CDS
GTGCAGAGGATTCCTGGTAG+GGG 0.518621 7.3:-59807036 MS.gene82054:CDS
AAAATCATATGCTGAGGAAA+CGG 0.519993 7.3:+59807294 None:intergenic
CCAAGCATTGCTTGAAGCTG+TGG 0.524919 7.3:-59807730 MS.gene82054:CDS
TCATCCCTCTACTACCAAAA+GGG 0.532544 7.3:+59808498 None:intergenic
TGTCTTGTGTTGGCAAAGGA+AGG 0.534777 7.3:-59806983 MS.gene82054:CDS
CGATCATCTGAAGTACATCC+GGG 0.536848 7.3:+59807211 None:intergenic
GACAGTGTTGAGGATGAAGT+AGG 0.538311 7.3:+59808929 None:intergenic
CTCTTGACCCGAATCCAAGA+AGG 0.539089 7.3:+59808205 None:intergenic
CAAGCAAACCGGAATAAGAC+TGG 0.539954 7.3:+59807265 None:intergenic
GATATTGAAGATGCATCTAT+GGG 0.546979 7.3:-59808719 MS.gene82054:CDS
TAGTAACTTCACAGAGTCGC+AGG 0.548006 7.3:-59807070 MS.gene82054:CDS
ATTGTTATCCTTTGCGCCGG+TGG 0.548468 7.3:+59808862 None:intergenic
AAGCACCAATCTTGAGCAAG+AGG 0.549041 7.3:+59807808 None:intergenic
CTTTGAAAAGGCTTCCCCAT+AGG 0.549307 7.3:+59807921 None:intergenic
CAAGTTTCACTTTCTCATGG+TGG 0.549648 7.3:-59808443 MS.gene82054:CDS
GCCTCCGGCGCTACCGTGTG+AGG 0.550488 7.3:+59808904 None:intergenic
GCACTAAAGGCAGGTACGAT+GGG 0.551600 7.3:+59807388 None:intergenic
ATGGGGAACCCTGGAAGTGG+TGG 0.554892 7.3:-59808077 MS.gene82054:CDS
CCATTGGCCTATGCTGCAGA+TGG 0.558131 7.3:+59808114 None:intergenic
TGTTGAGGATGAAGTAGGAG+TGG 0.560505 7.3:+59808934 None:intergenic
TCCTGGTAGGGGATTTCATG+TGG 0.561432 7.3:-59807025 MS.gene82054:CDS
AACAGAAGAAGAATCAATGC+TGG 0.562661 7.3:+59808556 None:intergenic
GTCAAGAGATGTTTCTTAGG+AGG 0.562943 7.3:-59808190 MS.gene82054:CDS
CTTCGCCGCCACCACTTCCA+GGG 0.563774 7.3:+59808069 None:intergenic
AGGCAGAGTGTTTGGTGCAG+AGG 0.564913 7.3:-59807050 MS.gene82054:CDS
GAATGATCTTGATCTTGACT+TGG 0.565052 7.3:+59808764 None:intergenic
AAGCAGAAAATGGGGAACCC+TGG 0.568423 7.3:-59808086 MS.gene82054:CDS
TTCCTCACCATCTGCAGCAT+AGG 0.569164 7.3:-59808121 MS.gene82054:CDS
TCCTCACACGGTAGCGCCGG+AGG 0.569283 7.3:-59808905 MS.gene82054:CDS
TGGTGGCGGCGAAGATGTGT+CGG 0.570313 7.3:-59808060 MS.gene82054:CDS
TCTTCCTCACACGGTAGCGC+CGG 0.570460 7.3:-59808908 MS.gene82054:CDS
GAGAATCTGAAGCAATATGC+TGG 0.570600 7.3:-59807540 MS.gene82054:CDS
TCGATTTCGTCGTGGTGTGA+GGG 0.574007 7.3:+59807579 None:intergenic
TCCACATGAAATCCCCTACC+AGG 0.574086 7.3:+59807024 None:intergenic
TTAACAAATCGAAGCACTAA+AGG 0.575268 7.3:+59807375 None:intergenic
GGTAATCCGGAACACGCGCA+AGG 0.576781 7.3:-59807975 MS.gene82054:CDS
AAAATGGGGAACCCTGGAAG+TGG 0.581437 7.3:-59808080 MS.gene82054:CDS
GGTATTGTTATCCTTTGCGC+CGG 0.583054 7.3:+59808859 None:intergenic
GCATTGCTTGAAGCTGTGGA+AGG 0.584725 7.3:-59807726 MS.gene82054:CDS
AGCACTAAAGGCAGGTACGA+TGG 0.584829 7.3:+59807387 None:intergenic
CGATAGCACCACCGGCGCAA+AGG 0.585841 7.3:-59808870 MS.gene82054:CDS
CCATCTGCAGCATAGGCCAA+TGG 0.588621 7.3:-59808114 MS.gene82054:CDS
GTCGGCGCATCAGTTTCAGC+AGG 0.589273 7.3:-59808042 MS.gene82054:CDS
TGCAGCTGAGAATATGTGAA+AGG 0.595086 7.3:+59808305 None:intergenic
GCAAAGGAAGGATCTCATCT+CGG 0.596929 7.3:-59806971 MS.gene82054:CDS
GCTTCTACCGATAGCACCAC+CGG 0.599672 7.3:-59808878 MS.gene82054:CDS
GGATAGGAGTTGTGATCGAA+CGG 0.600755 7.3:-59807322 MS.gene82054:CDS
ATGTATTCTTCAAAAGGTAA+GGG 0.601264 7.3:+59809127 None:intergenic
CAAATCGAAGCACTAAAGGC+AGG 0.602527 7.3:+59807379 None:intergenic
TTATGCAGGAGTTAGCACTA+AGG 0.606201 7.3:-59807644 MS.gene82054:CDS
TGAAGGTAAAAGATGTGGAA+TGG 0.609884 7.3:-59808816 MS.gene82054:CDS
CAAGCTGAAGGTAAAAGATG+TGG 0.613564 7.3:-59808821 MS.gene82054:CDS
AAATTGTCGTAACATTGGAT+AGG 0.615531 7.3:-59807338 MS.gene82054:CDS
AGGTAAAAGATGTGGAATGG+AGG 0.623374 7.3:-59808813 MS.gene82054:CDS
CAGGAGTTAGCACTAAGGAA+TGG 0.623926 7.3:-59807639 MS.gene82054:CDS
GGCCTATGCTGCAGATGGTG+AGG 0.630076 7.3:+59808119 None:intergenic
TCTTGACCCGAATCCAAGAA+GGG 0.632079 7.3:+59808206 None:intergenic
ATCACCAAATTTCTCCTATG+GGG 0.632427 7.3:-59807935 MS.gene82054:CDS
TCAACACTGTCTTCCTCACA+CGG 0.633334 7.3:-59808917 MS.gene82054:CDS
ACGCGCAAGGGATATTGGCG+CGG 0.634995 7.3:-59807962 MS.gene82054:CDS
AGAACCCTGACGACATGAGT+AGG 0.637655 7.3:+59807106 None:intergenic
TGGTTCATAACAAACTGATG+AGG 0.638887 7.3:+59808368 None:intergenic
AGAAACATACCACAAGCTGA+AGG 0.641675 7.3:-59808833 MS.gene82054:CDS
GTAATCCGGAACACGCGCAA+GGG 0.641709 7.3:-59807974 MS.gene82054:CDS
ACTGCTTCGCAATCGCGTAG+TGG 0.643756 7.3:+59807447 None:intergenic
AATGCAGTGATCTTGAGTGC+AGG 0.644744 7.3:+59807609 None:intergenic
GAGGGAAAATTGTTGCTATG+CGG 0.647727 7.3:-59809011 MS.gene82054:CDS
GTGAAGTTACTAAACGTCAA+CGG 0.647933 7.3:+59807081 None:intergenic
AAAACCTACTCATGTCGTCA+GGG 0.648819 7.3:-59807110 MS.gene82054:CDS
GAGTTAGCACTAAGGAATGG+TGG 0.649571 7.3:-59807636 MS.gene82054:CDS
CCAGCTAAAAGACTCAATTG+TGG 0.675226 7.3:-59808254 MS.gene82054:CDS
TGGCGCCTAAGCAGAAAATG+GGG 0.679052 7.3:-59808094 MS.gene82054:CDS
AACTGAGCTCGATTTCGTCG+TGG 0.682607 7.3:+59807571 None:intergenic
GCTGCAGAACTTATAGACGC+CGG 0.689078 7.3:-59807996 MS.gene82054:CDS
TGTTTGTGTCAATGTCCACC+CGG 0.690393 7.3:-59807229 MS.gene82054:CDS
TCATCTGAAGTACATCCGGG+TGG 0.714970 7.3:+59807214 None:intergenic
GTGTGAGGAAGACAGTGTTG+AGG 0.783398 7.3:+59808919 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTCCATATTGAAATTGATAA+TGG - chr7.3:59807346-59807365 MS.gene82054:CDS 20.0%
!! TTCCATTATCAATTTCAATA+TGG + chr7.3:59807351-59807370 None:intergenic 20.0%
!!! ATAGATTTTGATATTGGTTT+TGG - chr7.3:59808406-59808425 MS.gene82054:CDS 20.0%
!!! ATTCAATGGTTTTAGTTTTA+TGG - chr7.3:59807451-59807470 MS.gene82054:CDS 20.0%
!!! CACATAATAGATTTTGATAT+TGG - chr7.3:59808400-59808419 MS.gene82054:CDS 20.0%
! ATGTATTCTTCAAAAGGTAA+GGG + chr7.3:59806966-59806985 None:intergenic 25.0%
! TAATTTGAGAAAGAGCAAAT+AGG + chr7.3:59808682-59808701 None:intergenic 25.0%
! TATGTATTCTTCAAAAGGTA+AGG + chr7.3:59806967-59806986 None:intergenic 25.0%
! TCAAAAACAACAACAGAATT+GGG + chr7.3:59807113-59807132 None:intergenic 25.0%
! TGTTACCATTTGAAGAAATA+GGG + chr7.3:59807499-59807518 None:intergenic 25.0%
! TTGTTACCATTTGAAGAAAT+AGG + chr7.3:59807500-59807519 None:intergenic 25.0%
! TTTCCTATGTATTCTTCAAA+AGG + chr7.3:59806972-59806991 None:intergenic 25.0%
! TTTGAAGAATACATAGGAAA+AGG - chr7.3:59806972-59806991 MS.gene82054:CDS 25.0%
!! TATAATTGATCAGCTTTTCA+AGG - chr7.3:59808072-59808091 MS.gene82054:CDS 25.0%
!!! AAGGTCTGCTTTTTATTTTA+AGG - chr7.3:59808189-59808208 MS.gene82054:CDS 25.0%
!!! TTACCTTTTGAAGAATACAT+AGG - chr7.3:59806966-59806985 MS.gene82054:CDS 25.0%
!!! TTTGTTGATTTGGTTTTTTG+AGG + chr7.3:59807136-59807155 None:intergenic 25.0%
AAAATCATATGCTGAGGAAA+CGG + chr7.3:59808799-59808818 None:intergenic 30.0%
AAATTGTCGTAACATTGGAT+AGG - chr7.3:59808752-59808771 MS.gene82054:CDS 30.0%
AATCACCAAATTTCTCCTAT+GGG - chr7.3:59808154-59808173 MS.gene82054:CDS 30.0%
ACTTGTGAAGAACTGAAATT+AGG + chr7.3:59807632-59807651 None:intergenic 30.0%
AGATATTGAAGATGCATCTA+TGG - chr7.3:59807370-59807389 MS.gene82054:CDS 30.0%
AGCATCAACAACAATCAATT+GGG - chr7.3:59807681-59807700 MS.gene82054:CDS 30.0%
CAACAAGATGTTGAATTCAA+TGG - chr7.3:59807437-59807456 MS.gene82054:CDS 30.0%
CTTGTGAAGAACTGAAATTA+GGG + chr7.3:59807631-59807650 None:intergenic 30.0%
GATATTGAAGATGCATCTAT+GGG - chr7.3:59807371-59807390 MS.gene82054:CDS 30.0%
GTCAAAAACAACAACAGAAT+TGG + chr7.3:59807114-59807133 None:intergenic 30.0%
TGAAAGGAAAAACCAAACTA+GGG + chr7.3:59807772-59807791 None:intergenic 30.0%
! ATTTGTTCTGATTTCCCTTT+TGG - chr7.3:59807578-59807597 MS.gene82054:CDS 30.0%
! TAAAAAGCAGACCTTTGAAA+AGG + chr7.3:59808184-59808203 None:intergenic 30.0%
! TCCAATGTTACGACAATTTT+AGG + chr7.3:59808751-59808770 None:intergenic 30.0%
! TTAACAAATCGAAGCACTAA+AGG + chr7.3:59808718-59808737 None:intergenic 30.0%
! TTAAGCAAGCTTTTACATGT+TGG - chr7.3:59807395-59807414 MS.gene82054:CDS 30.0%
!!! GATTTTGATATTGGTTTTGG+TGG - chr7.3:59808409-59808428 MS.gene82054:CDS 30.0%
!!! GTCTGCTTTTTATTTTAAGG+AGG - chr7.3:59808192-59808211 MS.gene82054:CDS 30.0%
AAAACAAGCTTCTCAATTGC+CGG + chr7.3:59808922-59808941 None:intergenic 35.0%
AAATTTGCAAACTGCAGAAC+AGG + chr7.3:59808331-59808350 None:intergenic 35.0%
AACAGAAGAAGAATCAATGC+TGG + chr7.3:59807537-59807556 None:intergenic 35.0%
ACAATGGTCTTCATTTATGC+AGG - chr7.3:59808432-59808451 MS.gene82054:CDS 35.0%
AGTCTCTGAATTCTGTTTCA+TGG - chr7.3:59808614-59808633 MS.gene82054:CDS 35.0%
AGTGCAAAAATCATATGCTG+AGG + chr7.3:59808805-59808824 None:intergenic 35.0%
ATCAAGTGATTCAAGCAAAC+CGG + chr7.3:59808839-59808858 None:intergenic 35.0%
ATCACCAAATTTCTCCTATG+GGG - chr7.3:59808155-59808174 MS.gene82054:CDS 35.0%
CAATCACCAAATTTCTCCTA+TGG - chr7.3:59808153-59808172 MS.gene82054:CDS 35.0%
CAGCATCAACAACAATCAAT+TGG - chr7.3:59807680-59807699 MS.gene82054:CDS 35.0%
GAATGATCTTGATCTTGACT+TGG + chr7.3:59807329-59807348 None:intergenic 35.0%
GCCTAAAATTGTCGTAACAT+TGG - chr7.3:59808747-59808766 MS.gene82054:CDS 35.0%
GTGAAAGGAAAAACCAAACT+AGG + chr7.3:59807773-59807792 None:intergenic 35.0%
GTGAAGTTACTAAACGTCAA+CGG + chr7.3:59809012-59809031 None:intergenic 35.0%
TCACAAGTTTCACTTTCTCA+TGG - chr7.3:59807644-59807663 MS.gene82054:CDS 35.0%
TGAAGGTAAAAGATGTGGAA+TGG - chr7.3:59807274-59807293 MS.gene82054:CDS 35.0%
TGGTTCATAACAAACTGATG+AGG + chr7.3:59807725-59807744 None:intergenic 35.0%
! AAGAACAGTTTTTGCAAAGG+TGG - chr7.3:59807057-59807076 MS.gene82054:CDS 35.0%
! AGCAAGAACAGTTTTTGCAA+AGG - chr7.3:59807054-59807073 MS.gene82054:CDS 35.0%
! CTTGACCCTATTTCTTCAAA+TGG - chr7.3:59807491-59807510 MS.gene82054:CDS 35.0%
!! ATTTCCCTTTTGGTAGTAGA+GGG - chr7.3:59807588-59807607 MS.gene82054:CDS 35.0%
!! GCAATTGAGAAGCTTGTTTT+GGG - chr7.3:59808922-59808941 MS.gene82054:CDS 35.0%
!! GGAAAAGGTGTGTTAGATTT+TGG - chr7.3:59806987-59807006 MS.gene82054:CDS 35.0%
!!! ATATTGGTTTTGGTGGACAA+TGG - chr7.3:59808416-59808435 MS.gene82054:CDS 35.0%
AAAAACCTACTCATGTCGTC+AGG - chr7.3:59808979-59808998 MS.gene82054:CDS 40.0%
AAAACCTACTCATGTCGTCA+GGG - chr7.3:59808980-59808999 MS.gene82054:CDS 40.0%
AAAGATGTGGAATGGAGGAT+TGG - chr7.3:59807282-59807301 MS.gene82054:CDS 40.0%
AAGATACCCTTCTTGGATTC+GGG - chr7.3:59807878-59807897 MS.gene82054:CDS 40.0%
AAGATGTGGAATGGAGGATT+GGG - chr7.3:59807283-59807302 MS.gene82054:CDS 40.0%
AATTCCGAAGATACCCTTCT+TGG - chr7.3:59807871-59807890 MS.gene82054:CDS 40.0%
AGAAACATACCACAAGCTGA+AGG - chr7.3:59807257-59807276 MS.gene82054:CDS 40.0%
AGAATTCGCTTGTCTTGTGT+TGG - chr7.3:59809097-59809116 MS.gene82054:CDS 40.0%
AGGGAAAATTGTTGCTATGC+GGG - chr7.3:59807080-59807099 MS.gene82054:CDS 40.0%
AGGTAAAAGATGTGGAATGG+AGG - chr7.3:59807277-59807296 MS.gene82054:CDS 40.0%
ATCTCATCTCGGTTTCAACT+TGG - chr7.3:59809130-59809149 MS.gene82054:CDS 40.0%
CAAGCTGAAGGTAAAAGATG+TGG - chr7.3:59807269-59807288 MS.gene82054:CDS 40.0%
CAAGTTTCACTTTCTCATGG+TGG - chr7.3:59807647-59807666 MS.gene82054:CDS 40.0%
CCAGCTAAAAGACTCAATTG+TGG - chr7.3:59807836-59807855 MS.gene82054:CDS 40.0%
CGAGAAATACTATCTGCAAC+CGG - chr7.3:59808900-59808919 MS.gene82054:CDS 40.0%
GAAGATACCCTTCTTGGATT+CGG - chr7.3:59807877-59807896 MS.gene82054:CDS 40.0%
GAGGGAAAATTGTTGCTATG+CGG - chr7.3:59807079-59807098 MS.gene82054:CDS 40.0%
GGAAAAACCAAACTAGGGTT+AGG + chr7.3:59807767-59807786 None:intergenic 40.0%
GTCAAGAGATGTTTCTTAGG+AGG - chr7.3:59807900-59807919 MS.gene82054:CDS 40.0%
GTTTATGCCTAACCCTAGTT+TGG - chr7.3:59807757-59807776 MS.gene82054:CDS 40.0%
TCATCCCTCTACTACCAAAA+GGG + chr7.3:59807595-59807614 None:intergenic 40.0%
TGCAGCTGAGAATATGTGAA+AGG + chr7.3:59807788-59807807 None:intergenic 40.0%
TTATGCAGGAGTTAGCACTA+AGG - chr7.3:59808446-59808465 MS.gene82054:CDS 40.0%
TTCATCCCTCTACTACCAAA+AGG + chr7.3:59807596-59807615 None:intergenic 40.0%
! AACAGTTTTTGCAAAGGTGG+AGG - chr7.3:59807060-59807079 MS.gene82054:CDS 40.0%
! ACAGTTTTTGCAAAGGTGGA+GGG - chr7.3:59807061-59807080 MS.gene82054:CDS 40.0%
! AGCTTGTGGTATGTTTCTGT+TGG + chr7.3:59807255-59807274 None:intergenic 40.0%
! CATCTTTTACCTTCAGCTTG+TGG + chr7.3:59807269-59807288 None:intergenic 40.0%
! CCACAATTGAGTCTTTTAGC+TGG + chr7.3:59807839-59807858 None:intergenic 40.0%
! GACATGAGTAGGTTTTTCCA+AGG + chr7.3:59808976-59808995 None:intergenic 40.0%
! GAGAATCTGAAGCAATATGC+TGG - chr7.3:59808550-59808569 MS.gene82054:CDS 40.0%
! GCATAAACTGAGCTTGGTTT+TGG + chr7.3:59807745-59807764 None:intergenic 40.0%
! TCGATCATCTGAAGTACATC+CGG + chr7.3:59808883-59808902 None:intergenic 40.0%
!! CAATTGAGTCTTTTAGCTGG+AGG + chr7.3:59807836-59807855 None:intergenic 40.0%
!! GAATCCAAGAAGGGTATCTT+CGG + chr7.3:59807878-59807897 None:intergenic 40.0%
!! GATTTCCCTTTTGGTAGTAG+AGG - chr7.3:59807587-59807606 MS.gene82054:CDS 40.0%
!! GGCAATTGAGAAGCTTGTTT+TGG - chr7.3:59808921-59808940 MS.gene82054:CDS 40.0%
!! GTAGGAGTGGTTTGTTGATT+TGG + chr7.3:59807146-59807165 None:intergenic 40.0%
!! TTTGCACTCCAGTCTTATTC+CGG - chr7.3:59808817-59808836 MS.gene82054:CDS 40.0%
AAGCACCAATCTTGAGCAAG+AGG + chr7.3:59808285-59808304 None:intergenic 45.0%
AATGCAGTGATCTTGAGTGC+AGG + chr7.3:59808484-59808503 None:intergenic 45.0%
AATGGCGCCTAAGCAGAAAA+TGG - chr7.3:59807994-59808013 MS.gene82054:CDS 45.0%
ACTTATAGACGCCGGTAATC+CGG - chr7.3:59808102-59808121 MS.gene82054:CDS 45.0%
AGCTTCAAGCAATGCTTGGT+TGG + chr7.3:59808359-59808378 None:intergenic 45.0%
ATCTTGAGCAAGAGGCTAGT+TGG + chr7.3:59808277-59808296 None:intergenic 45.0%
ATGGCGCCTAAGCAGAAAAT+GGG - chr7.3:59807995-59808014 MS.gene82054:CDS 45.0%
CAAGCAAACCGGAATAAGAC+TGG + chr7.3:59808828-59808847 None:intergenic 45.0%
CAGGAGTTAGCACTAAGGAA+TGG - chr7.3:59808451-59808470 MS.gene82054:CDS 45.0%
CGGGTCAAGAGATGTTTCTT+AGG - chr7.3:59807897-59807916 MS.gene82054:CDS 45.0%
GAGTTAGCACTAAGGAATGG+TGG - chr7.3:59808454-59808473 MS.gene82054:CDS 45.0%
GCAAAGGAAGGATCTCATCT+CGG - chr7.3:59809119-59809138 MS.gene82054:CDS 45.0%
GCTTCCCCATAGGAGAAATT+TGG + chr7.3:59808162-59808181 None:intergenic 45.0%
GGATAGGAGTTGTGATCGAA+CGG - chr7.3:59808768-59808787 MS.gene82054:CDS 45.0%
GGTATTGTTATCCTTTGCGC+CGG + chr7.3:59807234-59807253 None:intergenic 45.0%
GGTTAGGCATAAACTGAGCT+TGG + chr7.3:59807751-59807770 None:intergenic 45.0%
TAGTAACTTCACAGAGTCGC+AGG - chr7.3:59809020-59809039 MS.gene82054:CDS 45.0%
TCAACACTGTCTTCCTCACA+CGG - chr7.3:59807173-59807192 MS.gene82054:CDS 45.0%
TCTTGACCCGAATCCAAGAA+GGG + chr7.3:59807887-59807906 None:intergenic 45.0%
TGTTGAGGATGAAGTAGGAG+TGG + chr7.3:59807159-59807178 None:intergenic 45.0%
TGTTTGTGTCAATGTCCACC+CGG - chr7.3:59808861-59808880 MS.gene82054:CDS 45.0%
TTCTATCCTGCGAACCCAAA+CGG + chr7.3:59808948-59808967 None:intergenic 45.0%
! ACTAGCCTCTTGCTCAAGAT+TGG - chr7.3:59808277-59808296 MS.gene82054:CDS 45.0%
! ATTTTCTGCTTAGGCGCCAT+TGG + chr7.3:59807995-59808014 None:intergenic 45.0%
! CAAATCGAAGCACTAAAGGC+AGG + chr7.3:59808714-59808733 None:intergenic 45.0%
! CGATCATCTGAAGTACATCC+GGG + chr7.3:59808882-59808901 None:intergenic 45.0%
! CTATGGGGAAGCCTTTTCAA+AGG - chr7.3:59808170-59808189 MS.gene82054:CDS 45.0%
! CTTTGAAAAGGCTTCCCCAT+AGG + chr7.3:59808172-59808191 None:intergenic 45.0%
! GACAGTGTTGAGGATGAAGT+AGG + chr7.3:59807164-59807183 None:intergenic 45.0%
! TGTCTTGTGTTGGCAAAGGA+AGG - chr7.3:59809107-59809126 MS.gene82054:CDS 45.0%
!!! AAGCTTGTTTTGGGCCGTTT+GGG - chr7.3:59808931-59808950 MS.gene82054:CDS 45.0%
AAAATGGGGAACCCTGGAAG+TGG - chr7.3:59808010-59808029 MS.gene82054:CDS 50.0%
AACTGAGCTCGATTTCGTCG+TGG + chr7.3:59808522-59808541 None:intergenic 50.0%
AAGCAGAAAATGGGGAACCC+TGG - chr7.3:59808004-59808023 MS.gene82054:CDS 50.0%
AATATCCCTTGCGCGTGTTC+CGG + chr7.3:59808124-59808143 None:intergenic 50.0%
AGAACCCTGACGACATGAGT+AGG + chr7.3:59808987-59809006 None:intergenic 50.0%
AGCACTAAAGGCAGGTACGA+TGG + chr7.3:59808706-59808725 None:intergenic 50.0%
ATTGTTATCCTTTGCGCCGG+TGG + chr7.3:59807231-59807250 None:intergenic 50.0%
CCACAGCTTCAAGCAATGCT+TGG + chr7.3:59808363-59808382 None:intergenic 50.0%
CGCAGGATAGAACACTTCCT+TGG - chr7.3:59808956-59808975 MS.gene82054:CDS 50.0%
CTCTTGACCCGAATCCAAGA+AGG + chr7.3:59807888-59807907 None:intergenic 50.0%
GAGGCTGAAGCTGAATCTCT+TGG + chr7.3:59807817-59807836 None:intergenic 50.0%
GCACTAAAGGCAGGTACGAT+GGG + chr7.3:59808705-59808724 None:intergenic 50.0%
GCATTGCTTGAAGCTGTGGA+AGG - chr7.3:59808364-59808383 MS.gene82054:CDS 50.0%
GCTGCAGAACTTATAGACGC+CGG - chr7.3:59808094-59808113 MS.gene82054:CDS 50.0%
GTGTGAGGAAGACAGTGTTG+AGG + chr7.3:59807174-59807193 None:intergenic 50.0%
TCCACATGAAATCCCCTACC+AGG + chr7.3:59809069-59809088 None:intergenic 50.0%
TCCTGGTAGGGGATTTCATG+TGG - chr7.3:59809065-59809084 MS.gene82054:CDS 50.0%
TCGATTTCGTCGTGGTGTGA+GGG + chr7.3:59808514-59808533 None:intergenic 50.0%
TGGCGCCTAAGCAGAAAATG+GGG - chr7.3:59807996-59808015 MS.gene82054:CDS 50.0%
TTCCTCACCATCTGCAGCAT+AGG - chr7.3:59807969-59807988 MS.gene82054:CDS 50.0%
! CCAAGCATTGCTTGAAGCTG+TGG - chr7.3:59808360-59808379 MS.gene82054:CDS 50.0%
! CGCTTGTCTTGTGTTGGCAA+AGG - chr7.3:59809103-59809122 MS.gene82054:CDS 50.0%
! GGGTTCCCCATTTTCTGCTT+AGG + chr7.3:59808004-59808023 None:intergenic 50.0%
! TCATCTGAAGTACATCCGGG+TGG + chr7.3:59808879-59808898 None:intergenic 50.0%
!! TGTTTGGTGCAGAGGATTCC+TGG - chr7.3:59809048-59809067 MS.gene82054:CDS 50.0%
!!! GAAGCTTGTTTTGGGCCGTT+TGG - chr7.3:59808930-59808949 MS.gene82054:CDS 50.0%
ACGCGATTGCGAAGCAGTTG+TGG - chr7.3:59808648-59808667 MS.gene82054:CDS 55.0%
ACTGCTTCGCAATCGCGTAG+TGG + chr7.3:59808646-59808665 None:intergenic 55.0%
CCATCTGCAGCATAGGCCAA+TGG - chr7.3:59807976-59807995 MS.gene82054:CDS 55.0%
CTCGATTTCGTCGTGGTGTG+AGG + chr7.3:59808515-59808534 None:intergenic 55.0%
GCTTCTACCGATAGCACCAC+CGG - chr7.3:59807212-59807231 MS.gene82054:CDS 55.0%
GGAACACGCGCAAGGGATAT+TGG - chr7.3:59808123-59808142 MS.gene82054:CDS 55.0%
GGTGCAGAGGATTCCTGGTA+GGG - chr7.3:59809053-59809072 MS.gene82054:CDS 55.0%
GTAATCCGGAACACGCGCAA+GGG - chr7.3:59808116-59808135 MS.gene82054:CDS 55.0%
GTGCAGAGGATTCCTGGTAG+GGG - chr7.3:59809054-59809073 MS.gene82054:CDS 55.0%
TGGTGCAGAGGATTCCTGGT+AGG - chr7.3:59809052-59809071 MS.gene82054:CDS 55.0%
TTGCGCGTGTTCCGGATTAC+CGG + chr7.3:59808116-59808135 None:intergenic 55.0%
! AGAGTCGCAGGCAGAGTGTT+TGG - chr7.3:59809032-59809051 MS.gene82054:CDS 55.0%
! CCATTGGCCTATGCTGCAGA+TGG + chr7.3:59807979-59807998 None:intergenic 55.0%
!! AGGCAGAGTGTTTGGTGCAG+AGG - chr7.3:59809040-59809059 MS.gene82054:CDS 55.0%
ACGCGCAAGGGATATTGGCG+CGG - chr7.3:59808128-59808147 MS.gene82054:CDS 60.0%
ATGGGGAACCCTGGAAGTGG+TGG - chr7.3:59808013-59808032 MS.gene82054:CDS 60.0%
GGCCTATGCTGCAGATGGTG+AGG + chr7.3:59807974-59807993 None:intergenic 60.0%
GGTAATCCGGAACACGCGCA+AGG - chr7.3:59808115-59808134 MS.gene82054:CDS 60.0%
GTCGGCGCATCAGTTTCAGC+AGG - chr7.3:59808048-59808067 MS.gene82054:CDS 60.0%
TCGCAATCGCGTAGTGGCTG+CGG + chr7.3:59808640-59808659 None:intergenic 60.0%
TCTTCCTCACACGGTAGCGC+CGG - chr7.3:59807182-59807201 MS.gene82054:CDS 60.0%
! TTTGGGCCGTTTGGGTTCGC+AGG - chr7.3:59808939-59808958 MS.gene82054:CDS 60.0%
!! CTTTGCGCCGGTGGTGCTAT+CGG + chr7.3:59807222-59807241 None:intergenic 60.0%
!! TGGTGGCGGCGAAGATGTGT+CGG - chr7.3:59808030-59808049 MS.gene82054:CDS 60.0%
CGATAGCACCACCGGCGCAA+AGG - chr7.3:59807220-59807239 MS.gene82054:CDS 65.0%
CTTCGCCGCCACCACTTCCA+GGG + chr7.3:59808024-59808043 None:intergenic 65.0%
GGGAACCCTGGAAGTGGTGG+CGG - chr7.3:59808016-59808035 MS.gene82054:CDS 65.0%
TCTTCGCCGCCACCACTTCC+AGG + chr7.3:59808025-59808044 None:intergenic 65.0%
!! ATCGGTAGAAGCGCCGCCTC+CGG + chr7.3:59807204-59807223 None:intergenic 65.0%
! TCACACGGTAGCGCCGGAGG+CGG - chr7.3:59807188-59807207 MS.gene82054:CDS 70.0%
! TCCTCACACGGTAGCGCCGG+AGG - chr7.3:59807185-59807204 MS.gene82054:CDS 70.0%
GCCTCCGGCGCTACCGTGTG+AGG + chr7.3:59807189-59807208 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 59806951 59809161 59806951 ID=MS.gene82054
chr7.3 mRNA 59806951 59809161 59806951 ID=MS.gene82054.t1;Parent=MS.gene82054
chr7.3 exon 59806951 59809161 59806951 ID=MS.gene82054.t1.exon1;Parent=MS.gene82054.t1
chr7.3 CDS 59806951 59809161 59806951 ID=cds.MS.gene82054.t1;Parent=MS.gene82054.t1
Gene Sequence

>MS.gene82054

ATGAAGGCTATGCCCTTACCTTTTGAAGAATACATAGGAAAAGGTGTGTTAGATTTTGGTTCAAGTGTTGTTGCTTCTTCAGATTCATATTTGTTTTCTCAACAGCAAGAACAGTTTTTGCAAAGGTGGAGGGAAAATTGTTGCTATGCGGGCATTGAGCCCAATTCTGTTGTTGTTTTTGACCTCAAAAAACCAAATCAACAAACCACTCCTACTTCATCCTCAACACTGTCTTCCTCACACGGTAGCGCCGGAGGCGGCGCTTCTACCGATAGCACCACCGGCGCAAAGGATAACAATACCAACAGAAACATACCACAAGCTGAAGGTAAAAGATGTGGAATGGAGGATTGGGAGAGTGTGTTATCTGAATCACCAAGTCAAGATCAAGATCATTCCATATTGAAATTGATAATGGAAGATATTGAAGATGCATCTATGGGATTAAGCAAGCTTTTACATGTTGGAACTAGTAATTCTCATTCTCAACAAGATGTTGAATTCAATGGTTTTAGTTTTATGGATCAAGAAAGTTCTGTACTTGACCCTATTTCTTCAAATGGTAACAACAATAACTTTGTAACCAGCATTGATTCTTCTTCTGTTATTGCTACTACTGCTGCTGAGATTTGTTCTGATTTCCCTTTTGGTAGTAGAGGGATGAATCAAATTCAAAACCCTAATTTCAGTTCTTCACAAGTTTCACTTTCTCATGGTGGTTTGTTTCATCAGCATCAACAACAATCAATTGGGTCTCTTGATGAGAAACTACCTCATCAGTTTGTTATGAACCAAAACCAAGCTCAGTTTATGCCTAACCCTAGTTTGGTTTTTCCTTTCACATATTCTCAGCTGCAAGAAAACCAAGAGATTCAGCTTCAGCCTCCAGCTAAAAGACTCAATTGTGGAACGAATTATGAAATTCCGAAGATACCCTTCTTGGATTCGGGTCAAGAGATGTTTCTTAGGAGGCAACAACAGCATCAGCAACAGCAACATCAGCAGCAGCTTCAACTGCTTCCTCACCATCTGCAGCATAGGCCAATGGCGCCTAAGCAGAAAATGGGGAACCCTGGAAGTGGTGGCGGCGAAGATGTGTCGGCGCATCAGTTTCAGCAGGCTATAATTGATCAGCTTTTCAAGGCTGCAGAACTTATAGACGCCGGTAATCCGGAACACGCGCAAGGGATATTGGCGCGGCTCAATCACCAAATTTCTCCTATGGGGAAGCCTTTTCAAAGGTCTGCTTTTTATTTTAAGGAGGCATTTCAATTGCTTCTTCAATCAAATGTCAACAACAGCAACAACAACAACAGCTTTTCACCAACTAGCCTCTTGCTCAAGATTGGTGCTTATAAATCATTCTCAGAAATCTCACCTGTTCTGCAGTTTGCAAATTTCACTTCCAACCAAGCATTGCTTGAAGCTGTGGAAGGTTTCGATCGAATTCACATAATAGATTTTGATATTGGTTTTGGTGGACAATGGTCTTCATTTATGCAGGAGTTAGCACTAAGGAATGGTGGTGCACCTGCACTCAAGATCACTGCATTTGTTTCGCCCTCACACCACGACGAAATCGAGCTCAGTTTCACTAACGAGAATCTGAAGCAATATGCTGGTGAAATTAACATGTCATTTGAGCTCGAGATTCTGACACTTGAGTCTCTGAATTCTGTTTCATGGCCGCAGCCACTACGCGATTGCGAAGCAGTTGTGGTTAACTTGCCTATTTGCTCTTTCTCAAATTACCCATCGTACCTGCCTTTAGTGCTTCGATTTGTTAAGCAGCTCATGCCTAAAATTGTCGTAACATTGGATAGGAGTTGTGATCGAACGGATGCACCGTTTCCTCAGCATATGATTTTTGCACTCCAGTCTTATTCCGGTTTGCTTGAATCACTTGATGCTGTTTGTGTCAATGTCCACCCGGATGTACTTCAGATGATCGAGAAATACTATCTGCAACCGGCAATTGAGAAGCTTGTTTTGGGCCGTTTGGGTTCGCAGGATAGAACACTTCCTTGGAAAAACCTACTCATGTCGTCAGGGTTCTCTCCGTTGACGTTTAGTAACTTCACAGAGTCGCAGGCAGAGTGTTTGGTGCAGAGGATTCCTGGTAGGGGATTTCATGTGGAGAAGAAGCAGAATTCGCTTGTCTTGTGTTGGCAAAGGAAGGATCTCATCTCGGTTTCAACTTGGAGATGCTGA
Protein sequence

>MS.gene82054.t1

MKAMPLPFEEYIGKGVLDFGSSVVASSDSYLFSQQQEQFLQRWRENCCYAGIEPNSVVVFDLKKPNQQTTPTSSSTLSSSHGSAGGGASTDSTTGAKDNNTNRNIPQAEGKRCGMEDWESVLSESPSQDQDHSILKLIMEDIEDASMGLSKLLHVGTSNSHSQQDVEFNGFSFMDQESSVLDPISSNGNNNNFVTSIDSSSVIATTAAEICSDFPFGSRGMNQIQNPNFSSSQVSLSHGGLFHQHQQQSIGSLDEKLPHQFVMNQNQAQFMPNPSLVFPFTYSQLQENQEIQLQPPAKRLNCGTNYEIPKIPFLDSGQEMFLRRQQQHQQQQHQQQLQLLPHHLQHRPMAPKQKMGNPGSGGGEDVSAHQFQQAIIDQLFKAAELIDAGNPEHAQGILARLNHQISPMGKPFQRSAFYFKEAFQLLLQSNVNNSNNNNSFSPTSLLLKIGAYKSFSEISPVLQFANFTSNQALLEAVEGFDRIHIIDFDIGFGGQWSSFMQELALRNGGAPALKITAFVSPSHHDEIELSFTNENLKQYAGEINMSFELEILTLESLNSVSWPQPLRDCEAVVVNLPICSFSNYPSYLPLVLRFVKQLMPKIVVTLDRSCDRTDAPFPQHMIFALQSYSGLLESLDAVCVNVHPDVLQMIEKYYLQPAIEKLVLGRLGSQDRTLPWKNLLMSSGFSPLTFSNFTESQAECLVQRIPGRGFHVEKKQNSLVLCWQRKDLISVSTWRC