Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82094.t1 | XP_003619829.1 | 96.6 | 597 | 14 | 3 | 1 | 591 | 1 | 597 | 0.00E+00 | 1076.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82094.t1 | Q5SMQ9 | 71.0 | 610 | 136 | 11 | 1 | 591 | 1 | 588 | 9.3e-225 | 781.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82094.t1 | Q8GV74 | 96.6 | 597 | 14 | 3 | 1 | 591 | 1 | 597 | 0.0e+00 | 1076.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050790 | MS.gene82094 | 0.80386 | 2.85E-49 | -1.69E-46 |
| MS.gene051648 | MS.gene82094 | 0.808128 | 3.61E-50 | -1.69E-46 |
| MS.gene052151 | MS.gene82094 | 0.819779 | 9.71E-53 | -1.69E-46 |
| MS.gene053536 | MS.gene82094 | 0.818936 | 1.51E-52 | -1.69E-46 |
| MS.gene053538 | MS.gene82094 | 0.811987 | 5.32E-51 | -1.69E-46 |
| MS.gene05894 | MS.gene82094 | 0.818176 | 2.25E-52 | -1.69E-46 |
| MS.gene059300 | MS.gene82094 | 0.801433 | 9.03E-49 | -1.69E-46 |
| MS.gene059424 | MS.gene82094 | 0.818152 | 2.28E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene82094 | MS.gene59137 | PPI |
| MS.gene83125 | MS.gene82094 | PPI |
| MS.gene026602 | MS.gene82094 | PPI |
| MS.gene62984 | MS.gene82094 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82094.t1 | MTR_6g069510 | 97.822 | 597 | 7 | 3 | 1 | 591 | 1 | 597 | 0.0 | 1190 |
| MS.gene82094.t1 | MTR_8g107360 | 72.344 | 593 | 86 | 9 | 1 | 591 | 1 | 517 | 0.0 | 816 |
| MS.gene82094.t1 | MTR_7g089360 | 67.628 | 624 | 129 | 14 | 1 | 591 | 1 | 584 | 0.0 | 792 |
| MS.gene82094.t1 | MTR_7g089360 | 66.236 | 619 | 136 | 14 | 1 | 586 | 1 | 579 | 0.0 | 768 |
| MS.gene82094.t1 | MTR_4g084870 | 62.801 | 664 | 162 | 13 | 1 | 591 | 1 | 652 | 0.0 | 766 |
| MS.gene82094.t1 | MTR_1g030890 | 63.333 | 630 | 176 | 11 | 1 | 591 | 1 | 614 | 0.0 | 741 |
| MS.gene82094.t1 | MTR_4g127100 | 60.287 | 627 | 204 | 10 | 1 | 591 | 1 | 618 | 0.0 | 709 |
| MS.gene82094.t1 | MTR_4g127090 | 56.956 | 611 | 192 | 11 | 1 | 591 | 1 | 560 | 0.0 | 629 |
| MS.gene82094.t1 | MTR_1g030890 | 59.369 | 539 | 162 | 11 | 1 | 499 | 1 | 522 | 0.0 | 578 |
| MS.gene82094.t1 | MTR_4g127100 | 56.797 | 537 | 187 | 10 | 1 | 501 | 1 | 528 | 0.0 | 554 |
| MS.gene82094.t1 | MTR_1g029190 | 49.169 | 602 | 213 | 11 | 1 | 591 | 1 | 520 | 3.66e-169 | 494 |
| MS.gene82094.t1 | MTR_2g038470 | 42.282 | 596 | 245 | 12 | 1 | 591 | 1 | 502 | 2.84e-145 | 432 |
| MS.gene82094.t1 | MTR_7g009370 | 57.778 | 180 | 69 | 1 | 411 | 590 | 177 | 349 | 3.98e-59 | 203 |
| MS.gene82094.t1 | MTR_7g009370 | 57.407 | 162 | 69 | 0 | 1 | 162 | 1 | 162 | 7.26e-55 | 191 |
| MS.gene82094.t1 | MTR_6g011400 | 50.000 | 204 | 93 | 1 | 397 | 591 | 151 | 354 | 3.06e-57 | 198 |
| MS.gene82094.t1 | MTR_6g011400 | 57.595 | 158 | 66 | 1 | 1 | 157 | 1 | 158 | 2.28e-53 | 187 |
| MS.gene82094.t1 | MTR_7g079720 | 44.059 | 202 | 104 | 2 | 387 | 588 | 159 | 351 | 1.95e-50 | 179 |
| MS.gene82094.t1 | MTR_7g079720 | 52.903 | 155 | 73 | 0 | 1 | 155 | 1 | 155 | 1.81e-48 | 174 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82094.t1 | AT1G73590 | 71.611 | 627 | 130 | 11 | 1 | 591 | 1 | 615 | 0.0 | 854 |
| MS.gene82094.t1 | AT2G01420 | 62.898 | 628 | 173 | 12 | 1 | 591 | 1 | 605 | 0.0 | 733 |
| MS.gene82094.t1 | AT2G01420 | 62.166 | 637 | 167 | 13 | 1 | 591 | 1 | 609 | 0.0 | 732 |
| MS.gene82094.t1 | AT1G23080 | 64.309 | 622 | 177 | 12 | 1 | 591 | 1 | 608 | 0.0 | 730 |
| MS.gene82094.t1 | AT1G23080 | 64.309 | 622 | 177 | 12 | 1 | 591 | 1 | 608 | 0.0 | 730 |
| MS.gene82094.t1 | AT1G23080 | 63.898 | 626 | 177 | 12 | 1 | 591 | 1 | 612 | 0.0 | 729 |
| MS.gene82094.t1 | AT1G70940 | 62.500 | 648 | 171 | 15 | 1 | 591 | 1 | 633 | 0.0 | 727 |
| MS.gene82094.t1 | AT5G57090 | 58.499 | 653 | 196 | 13 | 1 | 591 | 1 | 640 | 0.0 | 699 |
| MS.gene82094.t1 | AT1G23080 | 61.132 | 530 | 161 | 12 | 1 | 499 | 1 | 516 | 0.0 | 590 |
| MS.gene82094.t1 | AT2G01420 | 59.083 | 545 | 149 | 14 | 1 | 499 | 1 | 517 | 0.0 | 577 |
| MS.gene82094.t1 | AT5G57090 | 55.797 | 552 | 169 | 13 | 102 | 591 | 2 | 540 | 0.0 | 538 |
| MS.gene82094.t1 | AT1G77110 | 49.663 | 594 | 265 | 13 | 1 | 591 | 1 | 563 | 1.14e-179 | 523 |
| MS.gene82094.t1 | AT1G77110 | 49.568 | 579 | 258 | 13 | 1 | 576 | 1 | 548 | 1.44e-172 | 504 |
| MS.gene82094.t1 | AT5G15100 | 63.462 | 156 | 57 | 0 | 435 | 590 | 204 | 359 | 4.93e-59 | 203 |
| MS.gene82094.t1 | AT5G15100 | 49.091 | 165 | 79 | 1 | 1 | 160 | 1 | 165 | 2.65e-43 | 160 |
| MS.gene82094.t1 | AT5G16530 | 54.777 | 157 | 71 | 0 | 1 | 157 | 1 | 157 | 2.05e-52 | 184 |
| MS.gene82094.t1 | AT5G16530 | 51.493 | 134 | 65 | 0 | 444 | 577 | 195 | 328 | 1.29e-41 | 154 |
| MS.gene82094.t1 | AT5G16530 | 54.777 | 157 | 71 | 0 | 1 | 157 | 1 | 157 | 8.56e-52 | 183 |
| MS.gene82094.t1 | AT5G16530 | 53.103 | 145 | 68 | 0 | 444 | 588 | 195 | 339 | 1.53e-47 | 171 |
Find 126 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTATTTCTTCTTGCTATT+TGG | 0.135991 | 6.1:+63354025 | MS.gene82094:CDS |
| ATGGGAATTCCTTTACTTAA+AGG | 0.161203 | 6.1:+63354126 | MS.gene82094:CDS |
| GACTAGGCTTATATTGATTA+TGG | 0.205854 | 6.1:+63355453 | MS.gene82094:CDS |
| AACACTTACTCTAGCTTAAT+TGG | 0.219273 | 6.1:+63355502 | MS.gene82094:CDS |
| CTTGGTCTTTGGTTTCATTC+AGG | 0.226095 | 6.1:+63355530 | MS.gene82094:CDS |
| AATTGGTCTCACTTGGTCTT+TGG | 0.247229 | 6.1:+63355519 | MS.gene82094:CDS |
| CTTCCAAACACTTTGGTTAT+GGG | 0.260587 | 6.1:+63354108 | MS.gene82094:CDS |
| ACTTCCAAACACTTTGGTTA+TGG | 0.265129 | 6.1:+63354107 | MS.gene82094:CDS |
| AGACACTCAAGAGGACTATT+TGG | 0.274169 | 6.1:+63355315 | MS.gene82094:CDS |
| CTTTCATGTTGCCATTGTTC+AGG | 0.281726 | 6.1:+63357229 | MS.gene82094:CDS |
| GTAGCTATGATCTTAGCTTA+TGG | 0.302571 | 6.1:+63353835 | MS.gene82094:CDS |
| CACCCTGTGCTTAGAATATC+AGG | 0.308657 | 6.1:-63358338 | None:intergenic |
| CCATTCTAAACAACCCCTTT+TGG | 0.316887 | 6.1:-63354058 | None:intergenic |
| AATGATGTTGTTAATAACTA+TGG | 0.326058 | 6.1:+63354603 | MS.gene82094:CDS |
| TGGAGGAATCTCACCTTCTA+TGG | 0.341237 | 6.1:-63362176 | None:intergenic |
| TTAGTAGGAGAAAACATTCC+TGG | 0.343175 | 6.1:-63354726 | None:intergenic |
| AAGATCTTCATATGTTTGTT+TGG | 0.346836 | 6.1:+63354820 | MS.gene82094:CDS |
| ATTAAGCTAGAGTAAGTGTT+TGG | 0.363628 | 6.1:-63355499 | None:intergenic |
| TAGCTTATGGATCAGTAAAA+TGG | 0.367227 | 6.1:+63353848 | MS.gene82094:CDS |
| CCAAAAGGGGTTGTTTAGAA+TGG | 0.369590 | 6.1:+63354058 | MS.gene82094:CDS |
| GGAAATAGACTTTGCTATAA+TGG | 0.370605 | 6.1:-63356001 | None:intergenic |
| GGCTTATATTGATTATGGTT+TGG | 0.374310 | 6.1:+63355458 | MS.gene82094:CDS |
| ATTCCCATAACCAAAGTGTT+TGG | 0.375667 | 6.1:-63354111 | None:intergenic |
| TCTTCATAATTAGAAGGTCT+TGG | 0.376111 | 6.1:-63354654 | None:intergenic |
| CCTTTACTTAAAGGAATGTA+TGG | 0.377284 | 6.1:+63354135 | MS.gene82094:CDS |
| GAGAAAGATGAATTCAGCTT+TGG | 0.386961 | 6.1:+63355337 | MS.gene82094:CDS |
| TCAGCATTAGTAAGATTAGA+AGG | 0.389801 | 6.1:-63354471 | None:intergenic |
| GCTTCTTCTTCATAATTAGA+AGG | 0.394539 | 6.1:-63354660 | None:intergenic |
| AAGTCCTGCATCTGACAGTA+TGG | 0.396661 | 6.1:-63356022 | None:intergenic |
| TTGTTCTTCAATGTATCATT+TGG | 0.400452 | 6.1:+63354190 | MS.gene82094:CDS |
| TCACCTGTCTCTGATGTGTT+TGG | 0.400913 | 6.1:+63354855 | MS.gene82094:CDS |
| ACCTCTTAAGGTTCCTGCTA+AGG | 0.401281 | 6.1:+63362060 | MS.gene82094:intron |
| GGAGAAAACATTCCTGGATT+AGG | 0.402206 | 6.1:-63354720 | None:intergenic |
| GCAGCTGCTTCATTTGCTGT+TGG | 0.404122 | 6.1:+63357191 | MS.gene82094:CDS |
| ATGTAGTACACAAGAGTAAT+GGG | 0.415483 | 6.1:-63358493 | None:intergenic |
| TATTCCTTAGCAAAGACAAA+TGG | 0.416542 | 6.1:-63358305 | None:intergenic |
| GAAGGTGAGATTCCTCCATT+TGG | 0.421514 | 6.1:+63362181 | MS.gene82094:CDS |
| TTGGAGCAATTTCTCCAAAA+GGG | 0.423202 | 6.1:+63354044 | MS.gene82094:CDS |
| CTAGCTTAATTGGTCTCACT+TGG | 0.425011 | 6.1:+63355512 | MS.gene82094:CDS |
| TTGAATGTGTCTCCTGGAAA+AGG | 0.434406 | 6.1:+63354918 | MS.gene82094:CDS |
| ATCCTTACAAAATGAACCTT+AGG | 0.436200 | 6.1:+63353968 | MS.gene82094:CDS |
| CCTTGTTGGTCCAGCTGTCA+TGG | 0.441793 | 6.1:+63357169 | MS.gene82094:CDS |
| TCATTTGCTGTTGGACTCAA+AGG | 0.446394 | 6.1:+63357200 | MS.gene82094:CDS |
| GTCTCGTCGTTTAGCTCAGC+AGG | 0.447489 | 6.1:-63362145 | None:intergenic |
| GAACAGTTTCCTGACACTGC+TGG | 0.447998 | 6.1:+63354267 | MS.gene82094:CDS |
| TTTGGAGCAATTTCTCCAAA+AGG | 0.452388 | 6.1:+63354043 | MS.gene82094:CDS |
| CCATACATTCCTTTAAGTAA+AGG | 0.457088 | 6.1:-63354135 | None:intergenic |
| GGAATAGTTGCACCCTTAGC+AGG | 0.457629 | 6.1:-63362073 | None:intergenic |
| GATTGTTTGATGCTATGAAA+TGG | 0.458601 | 6.1:-63353948 | None:intergenic |
| GATGGCGATGTTATCTCCTT+AGG | 0.460449 | 6.1:-63362121 | None:intergenic |
| GTTAAATTGAATGTGTCTCC+TGG | 0.462197 | 6.1:+63354912 | MS.gene82094:CDS |
| GGAGGTGAATCATCCTCCTT+AGG | 0.463837 | 6.1:-63362100 | None:intergenic |
| ATGGGTGTGAGATTCCTTGT+TGG | 0.466818 | 6.1:+63357155 | MS.gene82094:CDS |
| CTCAACACTTCCAAACACTT+TGG | 0.468618 | 6.1:+63354101 | MS.gene82094:CDS |
| TGATTCTGATGTCATGTCAT+TGG | 0.471853 | 6.1:+63354311 | MS.gene82094:CDS |
| CCTGTCTCTGATGTGTTTGG+TGG | 0.474026 | 6.1:+63354858 | MS.gene82094:CDS |
| TTGATTCCTGAACATTGATC+AGG | 0.476336 | 6.1:-63353886 | None:intergenic |
| CCTCTTAAGGTTCCTGCTAA+GGG | 0.476928 | 6.1:+63362061 | MS.gene82094:intron |
| AACTAGAGCCTCTAGGTGTA+GGG | 0.478121 | 6.1:-63354521 | None:intergenic |
| GAATTCAGCTTTGGTAATAG+AGG | 0.484834 | 6.1:+63355346 | MS.gene82094:CDS |
| GAAGCAGCTGCCATGACAGC+TGG | 0.484986 | 6.1:-63357179 | None:intergenic |
| GGTGGAAGAAACTCAAACTT+TGG | 0.486326 | 6.1:+63354576 | MS.gene82094:CDS |
| AAACTAGAGCCTCTAGGTGT+AGG | 0.486546 | 6.1:-63354522 | None:intergenic |
| ATTCCTTAGCAAAGACAAAT+GGG | 0.487126 | 6.1:-63358304 | None:intergenic |
| ACAATGGAACCAGCAGTGTC+AGG | 0.491234 | 6.1:-63354276 | None:intergenic |
| GGAGGATGATTCACCTCCTA+AGG | 0.492919 | 6.1:+63362105 | MS.gene82094:CDS |
| AACTATCCTGCACCTAATCC+AGG | 0.494454 | 6.1:+63354708 | MS.gene82094:CDS |
| AATCTCACCTTCTATGGCAT+TGG | 0.494664 | 6.1:-63362170 | None:intergenic |
| ATACTGTCAGATGCAGGACT+TGG | 0.497015 | 6.1:+63356024 | MS.gene82094:CDS |
| TGCAACTATTCCACCTCCTA+AGG | 0.499441 | 6.1:+63362084 | MS.gene82094:CDS |
| GAGACAACCAATGCCATAGA+AGG | 0.500403 | 6.1:+63362163 | MS.gene82094:CDS |
| TGTCCCATTTGTCTTTGCTA+AGG | 0.502481 | 6.1:+63358301 | MS.gene82094:CDS |
| GGCATGGCTATGTTCAGTCT+TGG | 0.502767 | 6.1:+63356045 | MS.gene82094:CDS |
| GATGTAGTACACAAGAGTAA+TGG | 0.503834 | 6.1:-63358494 | None:intergenic |
| AACATTCCTGGATTAGGTGC+AGG | 0.504642 | 6.1:-63354714 | None:intergenic |
| CATCCTGATATTCTAAGCAC+AGG | 0.506231 | 6.1:+63358335 | MS.gene82094:CDS |
| AGCCTAGTCATCACACTAGC+TGG | 0.508803 | 6.1:-63355439 | None:intergenic |
| CATGAAGGTGGTGAGAAAGT+TGG | 0.509918 | 6.1:+63355391 | MS.gene82094:CDS |
| AAGATCATAGCTACATAAAG+TGG | 0.519198 | 6.1:-63353826 | None:intergenic |
| GCCTCTTGATCATTACCAAA+TGG | 0.519295 | 6.1:-63362196 | None:intergenic |
| GATGCTGAAATCAAAGAAGA+TGG | 0.521178 | 6.1:+63354357 | MS.gene82094:CDS |
| TTAGTAAGATTAGAAGGTCT+AGG | 0.522435 | 6.1:-63354465 | None:intergenic |
| ATAGACTTTGCTATAATGGC+AGG | 0.526481 | 6.1:-63355997 | None:intergenic |
| GTGTTTGGTGGACATGACTT+TGG | 0.541105 | 6.1:+63354870 | MS.gene82094:CDS |
| GTTAATGTTAAGAAGAGTAA+TGG | 0.542201 | 6.1:+63354777 | MS.gene82094:CDS |
| ATTTCCATACTGTCAGATGC+AGG | 0.544656 | 6.1:+63356018 | MS.gene82094:CDS |
| CAGCTTTGGTAATAGAGGAA+TGG | 0.545118 | 6.1:+63355351 | MS.gene82094:CDS |
| GAATCATCCTCCTTAGGAGG+TGG | 0.552065 | 6.1:-63362094 | None:intergenic |
| ATTGGATGGTAGAACACCAT+TGG | 0.552263 | 6.1:+63354329 | MS.gene82094:CDS |
| ATTTCAGCATCAGTTTCCAA+TGG | 0.555165 | 6.1:-63354345 | None:intergenic |
| CAGCAAAGAGTGCAACAAAA+CGG | 0.557146 | 6.1:-63353909 | None:intergenic |
| ATCAACATGGATTGAGACAA+TGG | 0.559862 | 6.1:-63354292 | None:intergenic |
| CACCAGCTAGTGTGATGACT+AGG | 0.560308 | 6.1:+63355437 | MS.gene82094:CDS |
| TCCATTTGGTAATGATCAAG+AGG | 0.574908 | 6.1:+63362195 | MS.gene82094:CDS |
| GGTTTATCTGCTAATTCAAG+AGG | 0.575033 | 6.1:+63354624 | MS.gene82094:CDS |
| CCACCAAACACATCAGAGAC+AGG | 0.575955 | 6.1:-63354858 | None:intergenic |
| TGGAGCAATTTCTCCAAAAG+GGG | 0.576280 | 6.1:+63354045 | MS.gene82094:CDS |
| TGGTAATAGAGGAATGGAAA+GGG | 0.578501 | 6.1:+63355357 | MS.gene82094:CDS |
| TGATTAAAACTAGAGCCTCT+AGG | 0.580637 | 6.1:-63354528 | None:intergenic |
| TCGTTTAGCTCAGCAGGAGA+TGG | 0.583126 | 6.1:-63362139 | None:intergenic |
| TCATAATAACAATGATGTCA+AGG | 0.586295 | 6.1:+63362258 | MS.gene82094:CDS |
| CTTATGGATCAGTAAAATGG+TGG | 0.591247 | 6.1:+63353851 | MS.gene82094:CDS |
| TTGGTAATAGAGGAATGGAA+AGG | 0.591523 | 6.1:+63355356 | MS.gene82094:CDS |
| GGCGATGTTATCTCCTTAGG+AGG | 0.600687 | 6.1:-63362118 | None:intergenic |
| GGTGGTGAGAAAGTTGGAGA+TGG | 0.602912 | 6.1:+63355397 | MS.gene82094:CDS |
| ATGAAATGGAATGAAAGAAG+TGG | 0.614917 | 6.1:-63353934 | None:intergenic |
| GGTGAATCATCCTCCTTAGG+AGG | 0.616509 | 6.1:-63362097 | None:intergenic |
| GTCAGATGCAGGACTTGGCA+TGG | 0.620374 | 6.1:+63356029 | MS.gene82094:CDS |
| AACTATTCCACCTCCTAAGG+AGG | 0.624759 | 6.1:+63362087 | MS.gene82094:CDS |
| TGTTTGAGTTTAGAGGAGCA+AGG | 0.624922 | 6.1:+63354232 | MS.gene82094:CDS |
| CAACAGGCAGCTCTTCCACA+AGG | 0.629681 | 6.1:+63358275 | MS.gene82094:intron |
| AGGGAAATGAATCAACATGA+AGG | 0.630340 | 6.1:+63355376 | MS.gene82094:CDS |
| CCATGACAGCTGGACCAACA+AGG | 0.634447 | 6.1:-63357169 | None:intergenic |
| TCTGATGTCATGTCATTGGA+TGG | 0.636707 | 6.1:+63354315 | MS.gene82094:CDS |
| TCTTGATCATTACCAAATGG+AGG | 0.638393 | 6.1:-63362193 | None:intergenic |
| AAGAAACAGGACCTGAACAA+TGG | 0.644490 | 6.1:-63357240 | None:intergenic |
| TCAAGAAACCCTACACCTAG+AGG | 0.654815 | 6.1:+63354513 | MS.gene82094:CDS |
| GAAATGAATCAACATGAAGG+TGG | 0.659006 | 6.1:+63355379 | MS.gene82094:CDS |
| CTACCATGTCATGACAGCAA+TGG | 0.661376 | 6.1:+63353801 | MS.gene82094:CDS |
| CTAGTCATCACACTAGCTGG+TGG | 0.661660 | 6.1:-63355436 | None:intergenic |
| ACATGACATCAGAATCAACA+TGG | 0.668465 | 6.1:-63354305 | None:intergenic |
| ACAAATGGGACAATTCCTTG+TGG | 0.669772 | 6.1:-63358290 | None:intergenic |
| GCACCATTGCTGTCATGACA+TGG | 0.674152 | 6.1:-63353804 | None:intergenic |
| ATCCTGATATTCTAAGCACA+GGG | 0.676564 | 6.1:+63358336 | MS.gene82094:CDS |
| GGGTCATAGAGACACTCAAG+AGG | 0.695679 | 6.1:+63355306 | MS.gene82094:CDS |
| ATTTACTCAAGAAGATCACA+AGG | 0.697954 | 6.1:+63354426 | MS.gene82094:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 63353781 | 63362291 | 63353781 | ID=MS.gene82094 |
| chr6.1 | mRNA | 63353781 | 63362291 | 63353781 | ID=MS.gene82094.t1;Parent=MS.gene82094 |
| chr6.1 | exon | 63353781 | 63354939 | 63353781 | ID=MS.gene82094.t1.exon1;Parent=MS.gene82094.t1 |
| chr6.1 | CDS | 63353781 | 63354939 | 63353781 | ID=cds.MS.gene82094.t1;Parent=MS.gene82094.t1 |
| chr6.1 | exon | 63355302 | 63355551 | 63355302 | ID=MS.gene82094.t1.exon2;Parent=MS.gene82094.t1 |
| chr6.1 | CDS | 63355302 | 63355551 | 63355302 | ID=cds.MS.gene82094.t1;Parent=MS.gene82094.t1 |
| chr6.1 | exon | 63355981 | 63356066 | 63355981 | ID=MS.gene82094.t1.exon3;Parent=MS.gene82094.t1 |
| chr6.1 | CDS | 63355981 | 63356066 | 63355981 | ID=cds.MS.gene82094.t1;Parent=MS.gene82094.t1 |
| chr6.1 | exon | 63357093 | 63357250 | 63357093 | ID=MS.gene82094.t1.exon4;Parent=MS.gene82094.t1 |
| chr6.1 | CDS | 63357093 | 63357250 | 63357093 | ID=cds.MS.gene82094.t1;Parent=MS.gene82094.t1 |
| chr6.1 | exon | 63358281 | 63358357 | 63358281 | ID=MS.gene82094.t1.exon5;Parent=MS.gene82094.t1 |
| chr6.1 | CDS | 63358281 | 63358357 | 63358281 | ID=cds.MS.gene82094.t1;Parent=MS.gene82094.t1 |
| chr6.1 | exon | 63358465 | 63358504 | 63358465 | ID=MS.gene82094.t1.exon6;Parent=MS.gene82094.t1 |
| chr6.1 | CDS | 63358465 | 63358504 | 63358465 | ID=cds.MS.gene82094.t1;Parent=MS.gene82094.t1 |
| chr6.1 | exon | 63362070 | 63362291 | 63362070 | ID=MS.gene82094.t1.exon7;Parent=MS.gene82094.t1 |
| chr6.1 | CDS | 63362070 | 63362291 | 63362070 | ID=cds.MS.gene82094.t1;Parent=MS.gene82094.t1 |
| Gene Sequence |
| Protein sequence |