Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene82594.t1 | XP_003599916.1 | 99.6 | 517 | 2 | 0 | 3 | 519 | 2 | 518 | 1.90E-293 | 1017.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene82594.t1 | P49299 | 79.1 | 516 | 104 | 2 | 6 | 519 | 3 | 516 | 9.2e-236 | 817.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene82594.t1 | G7IZY5 | 99.6 | 517 | 2 | 0 | 3 | 519 | 2 | 518 | 1.4e-293 | 1017.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene82594 | MS.gene94677 | PPI |
MS.gene82594 | MS.gene68895 | PPI |
MS.gene82594 | MS.gene57427 | PPI |
MS.gene82594 | MS.gene030781 | PPI |
MS.gene28100 | MS.gene82594 | PPI |
MS.gene82594 | MS.gene52387 | PPI |
MS.gene82594 | MS.gene95617 | PPI |
MS.gene004536 | MS.gene82594 | PPI |
MS.gene82594 | MS.gene84175 | PPI |
MS.gene82594 | MS.gene00278 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene82594.t1 | MTR_3g048920 | 99.613 | 517 | 2 | 0 | 3 | 519 | 2 | 518 | 0.0 | 1056 |
MS.gene82594.t1 | MTR_5g091930 | 84.569 | 499 | 72 | 2 | 19 | 517 | 15 | 508 | 0.0 | 881 |
MS.gene82594.t1 | MTR_3g051920 | 75.862 | 87 | 21 | 0 | 3 | 89 | 4 | 90 | 7.70e-38 | 139 |
MS.gene82594.t1 | MTR_2g061630 | 27.649 | 387 | 236 | 17 | 116 | 475 | 90 | 459 | 8.30e-27 | 113 |
MS.gene82594.t1 | MTR_2g061630 | 28.512 | 242 | 150 | 9 | 116 | 344 | 90 | 321 | 5.93e-16 | 79.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene82594.t1 | AT2G42790 | 77.451 | 510 | 112 | 2 | 11 | 519 | 2 | 509 | 0.0 | 829 |
MS.gene82594.t1 | AT3G58750 | 77.778 | 504 | 109 | 1 | 17 | 517 | 8 | 511 | 0.0 | 828 |
MS.gene82594.t1 | AT3G58740 | 69.023 | 481 | 145 | 1 | 11 | 491 | 2 | 478 | 0.0 | 702 |
MS.gene82594.t1 | AT2G44350 | 26.142 | 394 | 251 | 15 | 116 | 485 | 90 | 467 | 4.05e-25 | 108 |
MS.gene82594.t1 | AT2G44350 | 26.142 | 394 | 251 | 15 | 116 | 485 | 90 | 467 | 4.05e-25 | 108 |
MS.gene82594.t1 | AT2G44350 | 25.445 | 393 | 255 | 14 | 116 | 485 | 91 | 468 | 4.65e-25 | 108 |
MS.gene82594.t1 | AT2G44350 | 25.445 | 393 | 255 | 14 | 116 | 485 | 91 | 468 | 4.65e-25 | 108 |
MS.gene82594.t1 | AT3G60100 | 25.635 | 394 | 252 | 16 | 116 | 484 | 87 | 464 | 1.40e-24 | 107 |
MS.gene82594.t1 | AT3G60100 | 26.010 | 396 | 243 | 18 | 116 | 484 | 87 | 459 | 4.48e-23 | 102 |
MS.gene82594.t1 | AT3G60100 | 25.291 | 344 | 223 | 12 | 116 | 437 | 87 | 418 | 2.02e-20 | 94.0 |
Find 147 sgRNAs with CRISPR-Local
Find 331 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCCACCTCTCCGCTTCTTC+TGG | 0.134535 | 3.1:+36000484 | MS.gene82594:CDS |
AAACAAATAGTGCGGATTAT+TGG | 0.256194 | 3.1:+36003358 | MS.gene82594:CDS |
GGCTGAGAAAAGCACCTTTC+CGG | 0.262415 | 3.1:+36001221 | MS.gene82594:CDS |
AAACGAAAGCTCAGTGGTTT+TGG | 0.263084 | 3.1:+36004697 | MS.gene82594:CDS |
CTCAAAATGCTGAGTGAAAT+TGG | 0.267405 | 3.1:+36004491 | MS.gene82594:CDS |
AGGGTGGAGGAGCGCGGCGG+AGG | 0.292483 | 3.1:-36000461 | None:intergenic |
AAGAGGCGGCTTGCTGGATC+TGG | 0.293362 | 3.1:+36005762 | MS.gene82594:CDS |
GAGCGCGGCGGAGGAGGTGG+TGG | 0.294602 | 3.1:-36000452 | None:intergenic |
GCCTCAAAGAGGCGGCTTGC+TGG | 0.300425 | 3.1:+36005756 | MS.gene82594:CDS |
ACTCGGTACAGTTCTTTCTT+TGG | 0.317553 | 3.1:-36005691 | None:intergenic |
GAGGAGCGCGGCGGAGGAGG+TGG | 0.327253 | 3.1:-36000455 | None:intergenic |
AGCTTTACCACAGGGTGTTT+TGG | 0.328277 | 3.1:+36001958 | MS.gene82594:CDS |
CCAAATGTTGACTTCTACTC+TGG | 0.330372 | 3.1:+36005142 | MS.gene82594:CDS |
AATCACCTTCTTGAAATCAT+TGG | 0.330878 | 3.1:-36000608 | None:intergenic |
CTTGAAATCATTGGCTTTGA+CGG | 0.332214 | 3.1:-36000599 | None:intergenic |
TCAACAATTTCTTATATTGA+TGG | 0.338960 | 3.1:+36001153 | MS.gene82594:CDS |
TCCACCTCTCCGCTTCTTCT+GGG | 0.345972 | 3.1:+36000485 | MS.gene82594:CDS |
GTGGAGGAGCGCGGCGGAGG+AGG | 0.350492 | 3.1:-36000458 | None:intergenic |
AGGATACCCCATTGAGGAAT+TGG | 0.351549 | 3.1:+36001200 | MS.gene82594:CDS |
TTTATGTGATTTCAGGGCTA+TGG | 0.354411 | 3.1:+36005265 | MS.gene82594:intron |
GCACGAGTTAGACGAGGATT+AGG | 0.362486 | 3.1:-36004045 | None:intergenic |
TTTGGTTTCCAGATATCAAC+TGG | 0.363189 | 3.1:+36001069 | MS.gene82594:intron |
TCTACTCTGGATTAATATAT+AGG | 0.366202 | 3.1:+36005155 | MS.gene82594:CDS |
TGGGGTATCCTCTATATCTA+AGG | 0.367156 | 3.1:-36001188 | None:intergenic |
TTCTCAGCCAATTCCTCAAT+GGG | 0.372252 | 3.1:-36001207 | None:intergenic |
GCCTCAAGATGCACATCCTA+TGG | 0.381113 | 3.1:+36002608 | MS.gene82594:CDS |
AAGCGGAGAGGTGGAGAGGG+TGG | 0.388248 | 3.1:-36000477 | None:intergenic |
GCTCTATATGGACCTCTTCA+TGG | 0.390267 | 3.1:+36004342 | MS.gene82594:CDS |
TTTATGTTACAGGTATATGT+TGG | 0.390738 | 3.1:+36005642 | MS.gene82594:intron |
TTATGTTACAGGTATATGTT+GGG | 0.394506 | 3.1:+36005643 | MS.gene82594:intron |
GGCACATTGGCGGGAGTCCT+TGG | 0.394748 | 3.1:+36005346 | MS.gene82594:CDS |
GGAGGTGTTGGAGCTCTATA+TGG | 0.397369 | 3.1:+36004330 | MS.gene82594:CDS |
CCAGAGTAGAAGTCAACATT+TGG | 0.408985 | 3.1:-36005142 | None:intergenic |
TTTCTCAGCCAATTCCTCAA+TGG | 0.409394 | 3.1:-36001208 | None:intergenic |
AGGTGGTGGAGGTAGGAAGC+AGG | 0.411316 | 3.1:-36000438 | None:intergenic |
TGCTGCGATTAATCTTAGAT+TGG | 0.420662 | 3.1:+36003548 | MS.gene82594:CDS |
TTTCTTTGGTTGGAGCATAA+TGG | 0.420894 | 3.1:-36005677 | None:intergenic |
CGCGGCGGAGGAGGTGGTGG+AGG | 0.421471 | 3.1:-36000449 | None:intergenic |
TTATGTGATTTCAGGGCTAT+GGG | 0.426224 | 3.1:+36005266 | MS.gene82594:intron |
GATGTATACACTGCTATTGC+TGG | 0.431579 | 3.1:+36004309 | MS.gene82594:CDS |
TCCAGCAAGCCGCCTCTTTG+AGG | 0.434684 | 3.1:-36005757 | None:intergenic |
TGCAAGTCAGTTACAAGAAT+GGG | 0.444351 | 3.1:+36001913 | MS.gene82594:CDS |
CGGAGAGGTGGAGAGGGTGG+AGG | 0.450743 | 3.1:-36000474 | None:intergenic |
TGCCAAGTATCCAGCCATAC+GGG | 0.452855 | 3.1:-36005327 | None:intergenic |
GCTTTGAGTTGTAGATATCA+AGG | 0.454553 | 3.1:-36003324 | None:intergenic |
GGAGCAGTGTTTAAATATCC+AGG | 0.455528 | 3.1:-36001123 | None:intergenic |
AGTTTGTTGGATGGAAGAAC+AGG | 0.466071 | 3.1:-36003582 | None:intergenic |
TATGTAGGTTGCTGTTGCCT+TGG | 0.467353 | 3.1:+36005072 | MS.gene82594:intron |
CTCCGTGTAAGAAAGTTTGT+TGG | 0.469750 | 3.1:-36003595 | None:intergenic |
GGTACAGTTCTTTCTTTGGT+TGG | 0.469975 | 3.1:-36005687 | None:intergenic |
TGGATACTTGGCACATTGGC+GGG | 0.471996 | 3.1:+36005337 | MS.gene82594:CDS |
ACCGTTGTTGATGAACGTAC+TGG | 0.472528 | 3.1:+36000541 | MS.gene82594:CDS |
AGCGTTCCTTTGACATTGGA+CGG | 0.476214 | 3.1:-36000517 | None:intergenic |
GGTCTCATAATCTTTGTATC+CGG | 0.477964 | 3.1:-36005374 | None:intergenic |
GGTGAGCGTTCCTTTGACAT+TGG | 0.478015 | 3.1:-36000521 | None:intergenic |
AAAGATTATGAGACCTCAAC+AGG | 0.478244 | 3.1:+36005382 | MS.gene82594:CDS |
TTGGCTTTGACGGTGCCATC+AGG | 0.479200 | 3.1:-36000589 | None:intergenic |
AACATTCCAGAGTTCATTGA+AGG | 0.481622 | 3.1:+36004524 | MS.gene82594:CDS |
ACTGCTATTGCTGGAGGTGT+TGG | 0.483022 | 3.1:+36004318 | MS.gene82594:CDS |
GCGGGAGTCCTTGGATGATC+CGG | 0.484737 | 3.1:+36005355 | MS.gene82594:CDS |
CTGAGAGCAGGATTTGCATC+AGG | 0.486015 | 3.1:-36002672 | None:intergenic |
TCATTGAAGGTGTTAAAGCC+AGG | 0.487206 | 3.1:+36004537 | MS.gene82594:CDS |
TCTTATATTGATGGTGATGA+GGG | 0.490146 | 3.1:+36001162 | MS.gene82594:CDS |
CATATGAGATATGACACTTC+CGG | 0.491125 | 3.1:-36001240 | None:intergenic |
GAGCAGTGAGGGTGGATAAA+CGG | 0.494325 | 3.1:-36000414 | None:intergenic |
TTAACACCTTCAATGAACTC+TGG | 0.497621 | 3.1:-36004530 | None:intergenic |
GCTGCGATTAATCTTAGATT+GGG | 0.498832 | 3.1:+36003549 | MS.gene82594:CDS |
GCGGAGGAGGTGGTGGAGGT+AGG | 0.502506 | 3.1:-36000445 | None:intergenic |
GAGGATTAGGTTTATATGAC+CGG | 0.503527 | 3.1:-36004032 | None:intergenic |
CTGCAAGTCAGTTACAAGAA+TGG | 0.506092 | 3.1:+36001912 | MS.gene82594:CDS |
AAGAAGCGGAGAGGTGGAGA+GGG | 0.511382 | 3.1:-36000480 | None:intergenic |
TCCCAGAAGAAGCGGAGAGG+TGG | 0.511422 | 3.1:-36000486 | None:intergenic |
CAAAGGATCCCGGCCAACAA+TGG | 0.516149 | 3.1:-36004788 | None:intergenic |
AATAGTGCGGATTATTGGAA+AGG | 0.516235 | 3.1:+36003363 | MS.gene82594:CDS |
TTCTTATATTGATGGTGATG+AGG | 0.518608 | 3.1:+36001161 | MS.gene82594:CDS |
TCCTCGTCTAACTCGTGCAC+TGG | 0.521732 | 3.1:+36004050 | MS.gene82594:CDS |
AGGAAGCAGGTGAGCAGTGA+GGG | 0.522168 | 3.1:-36000425 | None:intergenic |
CTGGATACTTGGCACATTGG+CGG | 0.525933 | 3.1:+36005336 | MS.gene82594:CDS |
TGGCCGGGATCCTTTGATTG+AGG | 0.527960 | 3.1:+36004795 | MS.gene82594:CDS |
GAGAGGGTGGAGGAGCGCGG+CGG | 0.529792 | 3.1:-36000464 | None:intergenic |
GAGGGAATCCTTAGATATAG+AGG | 0.533890 | 3.1:+36001180 | MS.gene82594:CDS |
TTAATCTTAGATTGGGAGGA+AGG | 0.535401 | 3.1:+36003556 | MS.gene82594:CDS |
TAAGAAATTGTTGATCGCAC+AGG | 0.539966 | 3.1:-36001144 | None:intergenic |
CTGTACGCCACCTTGCATCA+AGG | 0.546143 | 3.1:+36004124 | MS.gene82594:CDS |
GTGCCAAGTATCCAGCCATA+CGG | 0.546898 | 3.1:-36005328 | None:intergenic |
ACAGAGAATCAAGCATGTAA+AGG | 0.548629 | 3.1:-36003623 | None:intergenic |
CCGTTGTTGATGAACGTACT+GGG | 0.553503 | 3.1:+36000542 | MS.gene82594:CDS |
GGAAGTAACACCGACAAGCT+TGG | 0.554782 | 3.1:+36005714 | MS.gene82594:CDS |
ATCCAACAAACTTTCTTACA+CGG | 0.558832 | 3.1:+36003593 | MS.gene82594:CDS |
TGGATAAACACCTCAATCAA+AGG | 0.560363 | 3.1:-36004805 | None:intergenic |
GTGGAGAGGGTGGAGGAGCG+CGG | 0.563453 | 3.1:-36000467 | None:intergenic |
GTGTAAGAAAGTTTGTTGGA+TGG | 0.564513 | 3.1:-36003591 | None:intergenic |
AGAGGCGGCTTGCTGGATCT+GGG | 0.566520 | 3.1:+36005763 | MS.gene82594:CDS |
TCAACACTCAGCTTTACCAC+AGG | 0.567669 | 3.1:+36001949 | MS.gene82594:CDS |
GTGTTACTTACTCTGAGAGC+AGG | 0.569172 | 3.1:-36002684 | None:intergenic |
TGGCTGGATACTTGGCACAT+TGG | 0.571393 | 3.1:+36005333 | MS.gene82594:CDS |
TGGAGAGATCCCAGAAGAAG+CGG | 0.573769 | 3.1:-36000494 | None:intergenic |
CGAAGATGCACGACGCTGCA+CGG | 0.573848 | 3.1:+36000389 | MS.gene82594:CDS |
AGATAACTGACCAAGCTTGT+CGG | 0.580957 | 3.1:-36005724 | None:intergenic |
GAAGAAGCGGAGAGGTGGAG+AGG | 0.581479 | 3.1:-36000481 | None:intergenic |
ACACCTCAATCAAAGGATCC+CGG | 0.586499 | 3.1:-36004798 | None:intergenic |
CTTTGTATCCGGATCATCCA+AGG | 0.587054 | 3.1:-36005363 | None:intergenic |
GAGAGATTTACCTTGATGCA+AGG | 0.588661 | 3.1:-36004134 | None:intergenic |
AAGCAGGTGAGCAGTGAGGG+TGG | 0.589658 | 3.1:-36000422 | None:intergenic |
CCTCAAGATGCACATCCTAT+GGG | 0.593639 | 3.1:+36002609 | MS.gene82594:CDS |
TCTTGTAACTGACTTGCAGA+AGG | 0.597030 | 3.1:-36001908 | None:intergenic |
TCTCCACCGTCCAATGTCAA+AGG | 0.601407 | 3.1:+36000511 | MS.gene82594:CDS |
GCGATTAATCTTAGATTGGG+AGG | 0.603867 | 3.1:+36003552 | MS.gene82594:CDS |
CAAAGCCAATGATTTCAAGA+AGG | 0.604210 | 3.1:+36000603 | MS.gene82594:CDS |
TATGTTACAGGTATATGTTG+GGG | 0.604659 | 3.1:+36005644 | MS.gene82594:intron |
AAACTATGACCCTAGAGCAA+AGG | 0.609044 | 3.1:+36004735 | MS.gene82594:CDS |
GAGATATGACACTTCCGGAA+AGG | 0.610123 | 3.1:-36001235 | None:intergenic |
GGACTCAAACTTTATGACCC+TGG | 0.610890 | 3.1:+36001105 | MS.gene82594:CDS |
TCGTTAGCTCCACCATGAAG+AGG | 0.611745 | 3.1:-36004354 | None:intergenic |
CCCATAGGATGTGCATCTTG+AGG | 0.613545 | 3.1:-36002609 | None:intergenic |
GCATTAACAAGTACACCCAT+AGG | 0.615591 | 3.1:-36002624 | None:intergenic |
AGTATTGAAGTCTCTCCTGA+TGG | 0.615879 | 3.1:+36000574 | MS.gene82594:CDS |
AGAAAGGAAATAACCTGTTG+AGG | 0.620319 | 3.1:-36005395 | None:intergenic |
TTGTCGGTGTTACTTCCACT+CGG | 0.620844 | 3.1:-36005708 | None:intergenic |
AGAGAGAGCAATCTTCTCCA+AGG | 0.621742 | 3.1:-36005089 | None:intergenic |
TTGTTGGATGGAAGAACAGG+TGG | 0.622701 | 3.1:-36003579 | None:intergenic |
GAGCAGTGTTTAAATATCCA+GGG | 0.630707 | 3.1:-36001122 | None:intergenic |
GCCAAGTATCCAGCCATACG+GGG | 0.634149 | 3.1:-36005326 | None:intergenic |
TACAGGTATATGTTGGGGAA+TGG | 0.635042 | 3.1:+36005649 | MS.gene82594:intron |
TCTTCATGGTGGAGCTAACG+AGG | 0.640510 | 3.1:+36004356 | MS.gene82594:CDS |
TATCGAATGCCTCAAAGAGG+CGG | 0.642616 | 3.1:+36005748 | MS.gene82594:CDS |
CCCAGTACGTTCATCAACAA+CGG | 0.645173 | 3.1:-36000542 | None:intergenic |
TGATGCAAGGTGGCGTACAG+CGG | 0.651794 | 3.1:-36004121 | None:intergenic |
TAGGAAGCAGGTGAGCAGTG+AGG | 0.653175 | 3.1:-36000426 | None:intergenic |
CAACACTCAGCTTTACCACA+GGG | 0.656304 | 3.1:+36001950 | MS.gene82594:CDS |
ATATAGAGGATACCCCATTG+AGG | 0.664619 | 3.1:+36001194 | MS.gene82594:CDS |
AGATTTACCTTGATGCAAGG+TGG | 0.665635 | 3.1:-36004131 | None:intergenic |
TCTCAGCCAATTCCTCAATG+GGG | 0.669370 | 3.1:-36001206 | None:intergenic |
AGATCCCAGAAGAAGCGGAG+AGG | 0.669679 | 3.1:-36000489 | None:intergenic |
TGAGAGACAAACAAATAGTG+CGG | 0.671447 | 3.1:+36003350 | MS.gene82594:CDS |
TCTAGGAAACGAAAGCTCAG+TGG | 0.672377 | 3.1:+36004691 | MS.gene82594:intron |
CTGTATCGAATGCCTCAAAG+AGG | 0.677618 | 3.1:+36005745 | MS.gene82594:CDS |
GTATACACTGCTATTGCTGG+AGG | 0.679988 | 3.1:+36004312 | MS.gene82594:CDS |
ATCAACTGGGAAGAATGACA+AGG | 0.680165 | 3.1:+36001083 | MS.gene82594:CDS |
CTATATGGACCTCTTCATGG+TGG | 0.692671 | 3.1:+36004345 | MS.gene82594:CDS |
TCAACTGGGAAGAATGACAA+GGG | 0.700148 | 3.1:+36001084 | MS.gene82594:CDS |
TCCAGTGCACGAGTTAGACG+AGG | 0.700211 | 3.1:-36004051 | None:intergenic |
TTGGTTTCCAGATATCAACT+GGG | 0.707330 | 3.1:+36001070 | MS.gene82594:intron |
AAAGAAAGAACTGTACCGAG+TGG | 0.709735 | 3.1:+36005693 | MS.gene82594:CDS |
CCAAGTATCCAGCCATACGG+GGG | 0.713717 | 3.1:-36005325 | None:intergenic |
GTTCCTTTGACATTGGACGG+TGG | 0.730649 | 3.1:-36000514 | None:intergenic |
AAGCTCACCAAAACACCCTG+TGG | 0.734798 | 3.1:-36001965 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATGAAATATAAGTAAAAA+TGG | - | chr3.1:36002221-36002240 | None:intergenic | 10.0% |
!!! | TATTTTTATGATGAAATATT+AGG | + | chr3.1:36000817-36000836 | MS.gene82594:intron | 10.0% |
!!! | TTTTTACTTATATTTCATTT+TGG | + | chr3.1:36002221-36002240 | MS.gene82594:intron | 10.0% |
!! | AAATATAAAGGCTAATAATA+AGG | - | chr3.1:36003807-36003826 | None:intergenic | 15.0% |
!! | AAATATCGCTATAAATATAA+AGG | - | chr3.1:36003819-36003838 | None:intergenic | 15.0% |
!! | AATAAAATAGTGAAAAATTC+AGG | - | chr3.1:36005299-36005318 | None:intergenic | 15.0% |
!! | ATTTGAAAAGTTAATGTATA+AGG | + | chr3.1:36002164-36002183 | MS.gene82594:intron | 15.0% |
!! | TGATTTAATTCAACAATTAT+AGG | + | chr3.1:36003838-36003857 | MS.gene82594:intron | 15.0% |
!! | TTTGTAGTAAATATTGTATT+CGG | - | chr3.1:36002436-36002455 | None:intergenic | 15.0% |
!!! | ATTCTGTTACTTAAAATTAA+AGG | + | chr3.1:36002985-36003004 | MS.gene82594:intron | 15.0% |
!!! | CTTTTTACTTAAATTTCATT+CGG | - | chr3.1:36002141-36002160 | None:intergenic | 15.0% |
!!! | TAATTGATTTTCTTTCAATT+TGG | + | chr3.1:36000640-36000659 | MS.gene82594:intron | 15.0% |
!!! | TATTTTTGATTTGATCAATT+GGG | + | chr3.1:36000720-36000739 | MS.gene82594:intron | 15.0% |
!!! | TTATTTTTGATTTGATCAAT+TGG | + | chr3.1:36000719-36000738 | MS.gene82594:intron | 15.0% |
!!! | TTCATATGTTTTTTAATTCA+GGG | + | chr3.1:36003301-36003320 | MS.gene82594:intron | 15.0% |
!!! | TTCTGTTACTTAAAATTAAA+GGG | + | chr3.1:36002986-36003005 | MS.gene82594:intron | 15.0% |
!!! | TTTTTACTTAAATTTCATTC+GGG | - | chr3.1:36002140-36002159 | None:intergenic | 15.0% |
!! | AAAGGTCTTAAAAAAATTGA+CGG | + | chr3.1:36004753-36004772 | MS.gene82594:CDS | 20.0% |
!! | AATACTAGCATAATCATTAT+TGG | + | chr3.1:36005457-36005476 | MS.gene82594:intron | 20.0% |
!! | AATGTAGAAAATGGAAAAAT+AGG | - | chr3.1:36002793-36002812 | None:intergenic | 20.0% |
!! | ACAAACTAAATATATTGAAC+AGG | - | chr3.1:36005022-36005041 | None:intergenic | 20.0% |
!! | ACGAGATATAATTTAAAGAA+AGG | - | chr3.1:36005414-36005433 | None:intergenic | 20.0% |
!! | ATAACATATACAGAAGATTA+AGG | - | chr3.1:36003412-36003431 | None:intergenic | 20.0% |
!! | ATCAATATTGTCAAATATTC+TGG | - | chr3.1:36005237-36005256 | None:intergenic | 20.0% |
!! | ATGAGATGAATAATCTAAAT+AGG | - | chr3.1:36003883-36003902 | None:intergenic | 20.0% |
!! | CAAACTAAATATATTGAACA+GGG | - | chr3.1:36005021-36005040 | None:intergenic | 20.0% |
!! | TCAACAATTTCTTATATTGA+TGG | + | chr3.1:36001153-36001172 | MS.gene82594:CDS | 20.0% |
!! | TCAATATTGTCAAATATTCT+GGG | - | chr3.1:36005236-36005255 | None:intergenic | 20.0% |
!! | TGAAATAACAAAGTTAGAAA+AGG | - | chr3.1:36002005-36002024 | None:intergenic | 20.0% |
!! | TGAATCCTAACAAAATATAA+AGG | - | chr3.1:36003227-36003246 | None:intergenic | 20.0% |
!! | TTAAATCATAAACTGTCTTT+AGG | - | chr3.1:36003680-36003699 | None:intergenic | 20.0% |
!! | TTCATGAACAATATATCTTA+AGG | - | chr3.1:36004901-36004920 | None:intergenic | 20.0% |
!! | TTTATGATGAAATATTAGGT+GGG | + | chr3.1:36000821-36000840 | MS.gene82594:intron | 20.0% |
!!! | ACTGATATATTTTATGTTAC+AGG | + | chr3.1:36005632-36005651 | MS.gene82594:intron | 20.0% |
!!! | ACTTTGTTATTTCATTTTAC+TGG | + | chr3.1:36002011-36002030 | MS.gene82594:intron | 20.0% |
!!! | ATGTCTGTTACATATTTTTT+TGG | + | chr3.1:36004850-36004869 | MS.gene82594:intron | 20.0% |
!!! | GTTCATATGTTTTTTAATTC+AGG | + | chr3.1:36003300-36003319 | MS.gene82594:intron | 20.0% |
!!! | TACTTATATTTCATTTTGGA+GGG | + | chr3.1:36002225-36002244 | MS.gene82594:intron | 20.0% |
!!! | TGAGTTTCTTGAAAATTTTA+AGG | + | chr3.1:36001676-36001695 | MS.gene82594:intron | 20.0% |
!!! | TTACTTATATTTCATTTTGG+AGG | + | chr3.1:36002224-36002243 | MS.gene82594:intron | 20.0% |
!!! | TTTTATGATGAAATATTAGG+TGG | + | chr3.1:36000820-36000839 | MS.gene82594:intron | 20.0% |
!!! | TTTTTTGGGATCAAATTTTA+TGG | + | chr3.1:36001745-36001764 | MS.gene82594:intron | 20.0% |
! | AAAATAGTGAAAAATTCAGG+TGG | - | chr3.1:36005296-36005315 | None:intergenic | 25.0% |
! | AAATTCCACAAAATAAAGTC+AGG | - | chr3.1:36002764-36002783 | None:intergenic | 25.0% |
! | AACAATTATAGGATCATGAT+AGG | + | chr3.1:36003849-36003868 | MS.gene82594:intron | 25.0% |
! | AAGAACCTAGAAGAAATAAA+GGG | - | chr3.1:36004572-36004591 | None:intergenic | 25.0% |
! | AATCTATTCAAATGTTACAC+CGG | + | chr3.1:36000993-36001012 | MS.gene82594:intron | 25.0% |
! | AGATGCTACAAATTAAATAC+AGG | - | chr3.1:36005499-36005518 | None:intergenic | 25.0% |
! | AGGCATATACATAACATAAA+AGG | - | chr3.1:36002093-36002112 | None:intergenic | 25.0% |
! | AGTGGATAAATGTTATGTTA+AGG | + | chr3.1:36002036-36002055 | MS.gene82594:intron | 25.0% |
! | AGTTAAAAACGTAACATATG+AGG | - | chr3.1:36001387-36001406 | None:intergenic | 25.0% |
! | ATAATTTCACTTGAGAGATT+AGG | - | chr3.1:36001702-36001721 | None:intergenic | 25.0% |
! | ATCAATTGAATTTATAGTCC+TGG | - | chr3.1:36004939-36004958 | None:intergenic | 25.0% |
! | ATCATCCTTATTGTTAGTAA+TGG | + | chr3.1:36005593-36005612 | MS.gene82594:intron | 25.0% |
! | ATGCCATTATTTGATTATGT+AGG | + | chr3.1:36005057-36005076 | MS.gene82594:intron | 25.0% |
! | ATTTGACAATATTGATCTGA+TGG | + | chr3.1:36005241-36005260 | MS.gene82594:intron | 25.0% |
! | CAACCTACATAATCAAATAA+TGG | - | chr3.1:36005063-36005082 | None:intergenic | 25.0% |
! | CATTGTCAAAATGTAGAAAA+TGG | - | chr3.1:36002802-36002821 | None:intergenic | 25.0% |
! | CCTTTAAATTATCATGACAA+AGG | - | chr3.1:36002299-36002318 | None:intergenic | 25.0% |
! | CCTTTGTCATGATAATTTAA+AGG | + | chr3.1:36002296-36002315 | MS.gene82594:intron | 25.0% |
! | GCTATATTATAGCAACTATT+TGG | - | chr3.1:36002465-36002484 | None:intergenic | 25.0% |
! | GTGAATCAAATGATATAACA+CGG | - | chr3.1:36003258-36003277 | None:intergenic | 25.0% |
! | GTGGATAAATGTTATGTTAA+GGG | + | chr3.1:36002037-36002056 | MS.gene82594:intron | 25.0% |
! | GTTCAAATTCTACTATGTTA+CGG | - | chr3.1:36002398-36002417 | None:intergenic | 25.0% |
! | TAAGAACCTAGAAGAAATAA+AGG | - | chr3.1:36004573-36004592 | None:intergenic | 25.0% |
! | TATCAATAAAGATTGCTGAT+TGG | + | chr3.1:36004591-36004610 | MS.gene82594:intron | 25.0% |
! | TATCTTGGAAAATGATTTAC+TGG | + | chr3.1:36005545-36005564 | MS.gene82594:intron | 25.0% |
! | TCATCCTTATTGTTAGTAAT+GGG | + | chr3.1:36005594-36005613 | MS.gene82594:intron | 25.0% |
! | TCTACTCTGGATTAATATAT+AGG | + | chr3.1:36005155-36005174 | MS.gene82594:CDS | 25.0% |
! | TGCCATAAAAATGTTTATCT+TGG | - | chr3.1:36002908-36002927 | None:intergenic | 25.0% |
! | TGTCATGATAATTTAAAGGA+GGG | + | chr3.1:36002300-36002319 | MS.gene82594:intron | 25.0% |
! | TTATGTTACAGGTATATGTT+GGG | + | chr3.1:36005643-36005662 | MS.gene82594:intron | 25.0% |
! | TTGTCATGATAATTTAAAGG+AGG | + | chr3.1:36002299-36002318 | MS.gene82594:intron | 25.0% |
! | TTTACAAAATTTGTAGCATC+TGG | + | chr3.1:36005522-36005541 | MS.gene82594:intron | 25.0% |
! | TTTATGTTACAGGTATATGT+TGG | + | chr3.1:36005642-36005661 | MS.gene82594:intron | 25.0% |
! | TTTGACAATATTGATCTGAT+GGG | + | chr3.1:36005242-36005261 | MS.gene82594:intron | 25.0% |
!! | GATTTGATTTCTTCTCTTAT+TGG | + | chr3.1:36001019-36001038 | MS.gene82594:intron | 25.0% |
!! | TGCCAAGATAAACATTTTTA+TGG | + | chr3.1:36002903-36002922 | MS.gene82594:intron | 25.0% |
!! | TTTTCCCATTACTAACAATA+AGG | - | chr3.1:36005601-36005620 | None:intergenic | 25.0% |
!!! | ATCTAAGACACTCTAAATTT+TGG | + | chr3.1:36003152-36003171 | MS.gene82594:intron | 25.0% |
!!! | ATTTTAGTGTTGTCAAATAG+CGG | + | chr3.1:36002362-36002381 | MS.gene82594:intron | 25.0% |
!!! | GATAATCAAATCATTTTAGC+TGG | + | chr3.1:36001438-36001457 | MS.gene82594:intron | 25.0% |
!!! | TGTTTATTTTGACATTTGTC+TGG | + | chr3.1:36002939-36002958 | MS.gene82594:intron | 25.0% |
!!! | TGTTTATTTTGACTTATGTC+TGG | + | chr3.1:36002842-36002861 | MS.gene82594:intron | 25.0% |
!!! | TTGCATAACATTTGTTTTGT+AGG | + | chr3.1:36002569-36002588 | MS.gene82594:intron | 25.0% |
AAACCTATCTTGAGAAAATG+AGG | - | chr3.1:36002113-36002132 | None:intergenic | 30.0% | |
AATACAAAAAATGCTCACGA+GGG | - | chr3.1:36004400-36004419 | None:intergenic | 30.0% | |
AATATAGCTCCAATTGATAG+TGG | + | chr3.1:36002477-36002496 | MS.gene82594:intron | 30.0% | |
AATATTAAGACTCATGCTAG+TGG | + | chr3.1:36000917-36000936 | MS.gene82594:intron | 30.0% | |
AATCACCTTCTTGAAATCAT+TGG | - | chr3.1:36000611-36000630 | None:intergenic | 30.0% | |
AATGCAACCTTCAATTATAC+AGG | + | chr3.1:36004463-36004482 | MS.gene82594:intron | 30.0% | |
AATGTTTAGTCAGTTGCTAA+AGG | + | chr3.1:36002876-36002895 | MS.gene82594:intron | 30.0% | |
ACTGGTGTAATTATCTAACT+TGG | + | chr3.1:36002543-36002562 | MS.gene82594:intron | 30.0% | |
ATCCAACAAACTTTCTTACA+CGG | + | chr3.1:36003593-36003612 | MS.gene82594:CDS | 30.0% | |
CAATTTCCATCACAAAAGTA+AGG | - | chr3.1:36002738-36002757 | None:intergenic | 30.0% | |
CTGCAAAAAACAATGTATAG+TGG | - | chr3.1:36004006-36004025 | None:intergenic | 30.0% | |
GATAAATGTTATGTTAAGGG+TGG | + | chr3.1:36002040-36002059 | MS.gene82594:intron | 30.0% | |
GATCCACATATCATAAACAA+TGG | - | chr3.1:36001795-36001814 | None:intergenic | 30.0% | |
GTAGAAAATGGAAAAATAGG+AGG | - | chr3.1:36002790-36002809 | None:intergenic | 30.0% | |
GTTCAAATTCCACTATCAAT+TGG | - | chr3.1:36002489-36002508 | None:intergenic | 30.0% | |
TAAAGGCTAATAATAAGGAG+AGG | - | chr3.1:36003802-36003821 | None:intergenic | 30.0% | |
TAAAGGGACTTAGTTAAGAA+AGG | + | chr3.1:36003002-36003021 | MS.gene82594:intron | 30.0% | |
TAACACTTGTGTAATGAATG+TGG | + | chr3.1:36002701-36002720 | MS.gene82594:intron | 30.0% | |
TAAGCATGTAGTATTCAGAA+TGG | + | chr3.1:36001555-36001574 | MS.gene82594:intron | 30.0% | |
TATGTTACAGGTATATGTTG+GGG | + | chr3.1:36005644-36005663 | MS.gene82594:intron | 30.0% | |
TGACTTATGTCTGGATTATT+TGG | + | chr3.1:36002851-36002870 | MS.gene82594:intron | 30.0% | |
TTGTTAAAGCAACGTATAAC+AGG | - | chr3.1:36004267-36004286 | None:intergenic | 30.0% | |
! | AAACAAATAGTGCGGATTAT+TGG | + | chr3.1:36003358-36003377 | MS.gene82594:CDS | 30.0% |
! | ATGCATATCTTTTCAGTGTA+TGG | + | chr3.1:36001878-36001897 | MS.gene82594:intron | 30.0% |
! | GCAGACCTTTATATTTTGTT+AGG | + | chr3.1:36003219-36003238 | MS.gene82594:intron | 30.0% |
! | TATTTCATTTTACTGGCAAG+TGG | + | chr3.1:36002018-36002037 | MS.gene82594:intron | 30.0% |
! | TTGTCTGATGCTCTAATTTT+TGG | + | chr3.1:36001051-36001070 | MS.gene82594:intron | 30.0% |
!! | CTATGTGTTGTTTATTCTCT+AGG | + | chr3.1:36004674-36004693 | MS.gene82594:intron | 30.0% |
!! | TCTTATATTGATGGTGATGA+GGG | + | chr3.1:36001162-36001181 | MS.gene82594:CDS | 30.0% |
!! | TGTATACCTTACTTTTGTGA+TGG | + | chr3.1:36002729-36002748 | MS.gene82594:intron | 30.0% |
!! | TTACTGGCTGTATCATTTTA+AGG | + | chr3.1:36005561-36005580 | MS.gene82594:intron | 30.0% |
!! | TTCTTATATTGATGGTGATG+AGG | + | chr3.1:36001161-36001180 | MS.gene82594:CDS | 30.0% |
!!! | CTATACATTGTTTTTTGCAG+TGG | + | chr3.1:36004006-36004025 | MS.gene82594:intron | 30.0% |
!!! | TGATTCCTGACTTTATTTTG+TGG | + | chr3.1:36002756-36002775 | MS.gene82594:intron | 30.0% |
!!! | TTTTTAAGACCTTTGCTCTA+GGG | - | chr3.1:36004747-36004766 | None:intergenic | 30.0% |
!!! | TTTTTTAAGACCTTTGCTCT+AGG | - | chr3.1:36004748-36004767 | None:intergenic | 30.0% |
AAACAATGGCCATAAAAGCA+GGG | - | chr3.1:36001781-36001800 | None:intergenic | 35.0% | |
AAAGATTATGAGACCTCAAC+AGG | + | chr3.1:36005382-36005401 | MS.gene82594:CDS | 35.0% | |
AACATTCCAGAGTTCATTGA+AGG | + | chr3.1:36004524-36004543 | MS.gene82594:CDS | 35.0% | |
AATAAAGGGCAACATTAACC+TGG | - | chr3.1:36004558-36004577 | None:intergenic | 35.0% | |
ACAGAGAATCAAGCATGTAA+AGG | - | chr3.1:36003626-36003645 | None:intergenic | 35.0% | |
ACATATCTGTGACGTCTAAT+CGG | - | chr3.1:36001617-36001636 | None:intergenic | 35.0% | |
AGAAAGGAAATAACCTGTTG+AGG | - | chr3.1:36005398-36005417 | None:intergenic | 35.0% | |
ATCAACACCACTGCAAATAA+GGG | - | chr3.1:36004292-36004311 | None:intergenic | 35.0% | |
ATTAAGTCTCAATTGCCTCA+TGG | - | chr3.1:36004968-36004987 | None:intergenic | 35.0% | |
ATTTAAACCAAACTGTCTGC+AGG | - | chr3.1:36004218-36004237 | None:intergenic | 35.0% | |
ATTTGTAGCATCTGGTATCT+TGG | + | chr3.1:36005530-36005549 | MS.gene82594:intron | 35.0% | |
CAAAGCCAATGATTTCAAGA+AGG | + | chr3.1:36000603-36000622 | MS.gene82594:CDS | 35.0% | |
CAATACAAAAAATGCTCACG+AGG | - | chr3.1:36004401-36004420 | None:intergenic | 35.0% | |
CATATGAGATATGACACTTC+CGG | - | chr3.1:36001243-36001262 | None:intergenic | 35.0% | |
CATGATAATTTAAAGGAGGG+TGG | + | chr3.1:36002303-36002322 | MS.gene82594:intron | 35.0% | |
CTAATCATGAAACAACGTTG+AGG | + | chr3.1:36001478-36001497 | MS.gene82594:intron | 35.0% | |
CTCAAAATGCTGAGTGAAAT+TGG | + | chr3.1:36004491-36004510 | MS.gene82594:CDS | 35.0% | |
GAAAATGGAAAAATAGGAGG+AGG | - | chr3.1:36002787-36002806 | None:intergenic | 35.0% | |
GAACTTTGTATAGTGATTGC+AGG | - | chr3.1:36002277-36002296 | None:intergenic | 35.0% | |
GAGAAGAAATCAAATCACAC+CGG | - | chr3.1:36001015-36001034 | None:intergenic | 35.0% | |
GAGCAGTGTTTAAATATCCA+GGG | - | chr3.1:36001125-36001144 | None:intergenic | 35.0% | |
GAGCTAACGAGGTAATTAAA+TGG | + | chr3.1:36004367-36004386 | MS.gene82594:intron | 35.0% | |
GAGGATTAGGTTTATATGAC+CGG | - | chr3.1:36004035-36004054 | None:intergenic | 35.0% | |
GCTGCGATTAATCTTAGATT+GGG | + | chr3.1:36003549-36003568 | MS.gene82594:CDS | 35.0% | |
GGTCTCATAATCTTTGTATC+CGG | - | chr3.1:36005377-36005396 | None:intergenic | 35.0% | |
GGTCTTAAAAAAATTGACGG+AGG | + | chr3.1:36004756-36004775 | MS.gene82594:CDS | 35.0% | |
GGTGTAATTATCTAACTTGG+TGG | + | chr3.1:36002546-36002565 | MS.gene82594:intron | 35.0% | |
GTGCATGAAACCTTTATACA+GGG | + | chr3.1:36001291-36001310 | MS.gene82594:intron | 35.0% | |
TAAACAATGGCCATAAAAGC+AGG | - | chr3.1:36001782-36001801 | None:intergenic | 35.0% | |
TAAGAAATTGTTGATCGCAC+AGG | - | chr3.1:36001147-36001166 | None:intergenic | 35.0% | |
TAATTTAAAGGAGGGTGGTT+AGG | + | chr3.1:36002308-36002327 | MS.gene82594:intron | 35.0% | |
TAGATTTACACCAGCATATC+CGG | - | chr3.1:36000979-36000998 | None:intergenic | 35.0% | |
TCAATTGATCAATGACCATG+AGG | + | chr3.1:36004950-36004969 | MS.gene82594:intron | 35.0% | |
TGAGAGACAAACAAATAGTG+CGG | + | chr3.1:36003350-36003369 | MS.gene82594:CDS | 35.0% | |
TGCAAGTCAGTTACAAGAAT+GGG | + | chr3.1:36001913-36001932 | MS.gene82594:CDS | 35.0% | |
TGCTGCGATTAATCTTAGAT+TGG | + | chr3.1:36003548-36003567 | MS.gene82594:CDS | 35.0% | |
TGGATAAACACCTCAATCAA+AGG | - | chr3.1:36004808-36004827 | None:intergenic | 35.0% | |
TGGCCATTGTTTATGATATG+TGG | + | chr3.1:36001789-36001808 | MS.gene82594:intron | 35.0% | |
TGTGCATGAAACCTTTATAC+AGG | + | chr3.1:36001290-36001309 | MS.gene82594:intron | 35.0% | |
TTAAATACAGGTATCACCAC+AGG | - | chr3.1:36005487-36005506 | None:intergenic | 35.0% | |
TTAACACCTTCAATGAACTC+TGG | - | chr3.1:36004533-36004552 | None:intergenic | 35.0% | |
TTAATCTTAGATTGGGAGGA+AGG | + | chr3.1:36003556-36003575 | MS.gene82594:CDS | 35.0% | |
TTATGTGATTTCAGGGCTAT+GGG | + | chr3.1:36005266-36005285 | MS.gene82594:intron | 35.0% | |
TTGGTTTCCAGATATCAACT+GGG | + | chr3.1:36001070-36001089 | MS.gene82594:intron | 35.0% | |
TTTATGTGATTTCAGGGCTA+TGG | + | chr3.1:36005265-36005284 | MS.gene82594:intron | 35.0% | |
TTTCTTTGGTTGGAGCATAA+TGG | - | chr3.1:36005680-36005699 | None:intergenic | 35.0% | |
TTTGCATCTCAGTTAGTCAA+TGG | - | chr3.1:36001831-36001850 | None:intergenic | 35.0% | |
! | AACAATACCCTTATTTGCAG+TGG | + | chr3.1:36004282-36004301 | MS.gene82594:intron | 35.0% |
! | AATAGTGCGGATTATTGGAA+AGG | + | chr3.1:36003363-36003382 | MS.gene82594:CDS | 35.0% |
! | ATGCCTCATTTTCTCAAGAT+AGG | + | chr3.1:36002107-36002126 | MS.gene82594:intron | 35.0% |
! | CAATTTCACTCAGCATTTTG+AGG | - | chr3.1:36004493-36004512 | None:intergenic | 35.0% |
! | CTGATGAGTATTTTGTCAAG+AGG | + | chr3.1:36005110-36005129 | MS.gene82594:CDS | 35.0% |
! | GATGGGTTTATGTGATTTCA+GGG | + | chr3.1:36005259-36005278 | MS.gene82594:intron | 35.0% |
! | TAAACTTCTCCGAGTCTTTT+TGG | + | chr3.1:36004185-36004204 | MS.gene82594:intron | 35.0% |
! | TCAAATTTTATGGCCTGACA+TGG | + | chr3.1:36001755-36001774 | MS.gene82594:intron | 35.0% |
! | TGTTGCCCTTTATTTCTTCT+AGG | + | chr3.1:36004564-36004583 | MS.gene82594:intron | 35.0% |
! | TTTGGTTTCCAGATATCAAC+TGG | + | chr3.1:36001069-36001088 | MS.gene82594:intron | 35.0% |
!! | CTTGAAATCATTGGCTTTGA+CGG | - | chr3.1:36000602-36000621 | None:intergenic | 35.0% |
!! | GCTTTGAGTTGTAGATATCA+AGG | - | chr3.1:36003327-36003346 | None:intergenic | 35.0% |
!! | GTGTAAGAAAGTTTGTTGGA+TGG | - | chr3.1:36003594-36003613 | None:intergenic | 35.0% |
!! | TGATGGGTTTATGTGATTTC+AGG | + | chr3.1:36005258-36005277 | MS.gene82594:intron | 35.0% |
!! | TTTTGGAGGGCGTAATTTAT+AGG | + | chr3.1:36002238-36002257 | MS.gene82594:intron | 35.0% |
AAACTATGACCCTAGAGCAA+AGG | + | chr3.1:36004735-36004754 | MS.gene82594:CDS | 40.0% | |
AAAGAAAGAACTGTACCGAG+TGG | + | chr3.1:36005693-36005712 | MS.gene82594:CDS | 40.0% | |
ACTCGGTACAGTTCTTTCTT+TGG | - | chr3.1:36005694-36005713 | None:intergenic | 40.0% | |
AGATAACTGACCAAGCTTGT+CGG | - | chr3.1:36005727-36005746 | None:intergenic | 40.0% | |
AGATTTACCTTGATGCAAGG+TGG | - | chr3.1:36004134-36004153 | None:intergenic | 40.0% | |
AGGACAGCCTGTATAATTGA+AGG | - | chr3.1:36004473-36004492 | None:intergenic | 40.0% | |
AGGTCTGCTCATAGTATTAG+AGG | - | chr3.1:36003207-36003226 | None:intergenic | 40.0% | |
ATATAGAGGATACCCCATTG+AGG | + | chr3.1:36001194-36001213 | MS.gene82594:CDS | 40.0% | |
ATCAACTGGGAAGAATGACA+AGG | + | chr3.1:36001083-36001102 | MS.gene82594:CDS | 40.0% | |
CATCAACACCACTGCAAATA+AGG | - | chr3.1:36004293-36004312 | None:intergenic | 40.0% | |
CCAGAGTAGAAGTCAACATT+TGG | - | chr3.1:36005145-36005164 | None:intergenic | 40.0% | |
CTATACACGACCCTGTATAA+AGG | - | chr3.1:36001304-36001323 | None:intergenic | 40.0% | |
CTCCGTGTAAGAAAGTTTGT+TGG | - | chr3.1:36003598-36003617 | None:intergenic | 40.0% | |
CTGCAAGTCAGTTACAAGAA+TGG | + | chr3.1:36001912-36001931 | MS.gene82594:CDS | 40.0% | |
GAAGCAATTGATCAATGACC+AGG | + | chr3.1:36004918-36004937 | MS.gene82594:intron | 40.0% | |
GAGAGATTTACCTTGATGCA+AGG | - | chr3.1:36004137-36004156 | None:intergenic | 40.0% | |
GAGGGAATCCTTAGATATAG+AGG | + | chr3.1:36001180-36001199 | MS.gene82594:CDS | 40.0% | |
GATGTATACACTGCTATTGC+TGG | + | chr3.1:36004309-36004328 | MS.gene82594:CDS | 40.0% | |
GCATTAACAAGTACACCCAT+AGG | - | chr3.1:36002627-36002646 | None:intergenic | 40.0% | |
GCGATTAATCTTAGATTGGG+AGG | + | chr3.1:36003552-36003571 | MS.gene82594:CDS | 40.0% | |
GGAGCAGTGTTTAAATATCC+AGG | - | chr3.1:36001126-36001145 | None:intergenic | 40.0% | |
GGTACAGTTCTTTCTTTGGT+TGG | - | chr3.1:36005690-36005709 | None:intergenic | 40.0% | |
TAACAGACATGACACAGACA+GGG | - | chr3.1:36004840-36004859 | None:intergenic | 40.0% | |
TACAGGTATATGTTGGGGAA+TGG | + | chr3.1:36005649-36005668 | MS.gene82594:intron | 40.0% | |
TCAACTGGGAAGAATGACAA+GGG | + | chr3.1:36001084-36001103 | MS.gene82594:CDS | 40.0% | |
TTAAGACTCATGCTAGTGGA+CGG | + | chr3.1:36000921-36000940 | MS.gene82594:intron | 40.0% | |
TTCTCAGCCAATTCCTCAAT+GGG | - | chr3.1:36001210-36001229 | None:intergenic | 40.0% | |
TTTCTCAGCCAATTCCTCAA+TGG | - | chr3.1:36001211-36001230 | None:intergenic | 40.0% | |
! | AAACGAAAGCTCAGTGGTTT+TGG | + | chr3.1:36004697-36004716 | MS.gene82594:CDS | 40.0% |
! | AAGTGTTTTCCATTGTTGGC+CGG | + | chr3.1:36004779-36004798 | MS.gene82594:CDS | 40.0% |
! | AGTATTGAAGTCTCTCCTGA+TGG | + | chr3.1:36000574-36000593 | MS.gene82594:CDS | 40.0% |
! | CATTCTTCCCAGTTGATATC+TGG | - | chr3.1:36001080-36001099 | None:intergenic | 40.0% |
! | TGGGGTATCCTCTATATCTA+AGG | - | chr3.1:36001191-36001210 | None:intergenic | 40.0% |
!! | AGTTTGTTGGATGGAAGAAC+AGG | - | chr3.1:36003585-36003604 | None:intergenic | 40.0% |
!! | CCAAATGTTGACTTCTACTC+TGG | + | chr3.1:36005142-36005161 | MS.gene82594:CDS | 40.0% |
!! | TCATTGAAGGTGTTAAAGCC+AGG | + | chr3.1:36004537-36004556 | MS.gene82594:CDS | 40.0% |
!! | TCTTGTAACTGACTTGCAGA+AGG | - | chr3.1:36001911-36001930 | None:intergenic | 40.0% |
!! | TTTATTTGCTATCCCCCGTA+TGG | + | chr3.1:36005313-36005332 | MS.gene82594:CDS | 40.0% |
!!! | GAGGAAGTGTTTTCCATTGT+TGG | + | chr3.1:36004775-36004794 | MS.gene82594:CDS | 40.0% |
!!! | TTGTTTTTTGCAGTGGCAAC+CGG | + | chr3.1:36004013-36004032 | MS.gene82594:intron | 40.0% |
AATCATTATTGGCCGACCTG+TGG | + | chr3.1:36005468-36005487 | MS.gene82594:intron | 45.0% | |
ACACCTCAATCAAAGGATCC+CGG | - | chr3.1:36004801-36004820 | None:intergenic | 45.0% | |
AGAGAGAGCAATCTTCTCCA+AGG | - | chr3.1:36005092-36005111 | None:intergenic | 45.0% | |
AGCGTTCCTTTGACATTGGA+CGG | - | chr3.1:36000520-36000539 | None:intergenic | 45.0% | |
AGGATACCCCATTGAGGAAT+TGG | + | chr3.1:36001200-36001219 | MS.gene82594:CDS | 45.0% | |
ATACAGGTATCACCACAGGT+CGG | - | chr3.1:36005483-36005502 | None:intergenic | 45.0% | |
CAACACTCAGCTTTACCACA+GGG | + | chr3.1:36001950-36001969 | MS.gene82594:CDS | 45.0% | |
CACAGACAGGGAATACAAGA+TGG | - | chr3.1:36004828-36004847 | None:intergenic | 45.0% | |
CCCAATGACCAACTAATCAG+GGG | - | chr3.1:36000956-36000975 | None:intergenic | 45.0% | |
CCCAGTACGTTCATCAACAA+CGG | - | chr3.1:36000545-36000564 | None:intergenic | 45.0% | |
CCTCAAGATGCACATCCTAT+GGG | + | chr3.1:36002609-36002628 | MS.gene82594:CDS | 45.0% | |
CGATCTGCGATTCATAACAC+TGG | + | chr3.1:36002525-36002544 | MS.gene82594:intron | 45.0% | |
CTATATGGACCTCTTCATGG+TGG | + | chr3.1:36004345-36004364 | MS.gene82594:CDS | 45.0% | |
CTGTATCGAATGCCTCAAAG+AGG | + | chr3.1:36005745-36005764 | MS.gene82594:CDS | 45.0% | |
CTTTGTATCCGGATCATCCA+AGG | - | chr3.1:36005366-36005385 | None:intergenic | 45.0% | |
GAGATATGACACTTCCGGAA+AGG | - | chr3.1:36001238-36001257 | None:intergenic | 45.0% | |
GCCCAATGACCAACTAATCA+GGG | - | chr3.1:36000957-36000976 | None:intergenic | 45.0% | |
GCTCTATATGGACCTCTTCA+TGG | + | chr3.1:36004342-36004361 | MS.gene82594:CDS | 45.0% | |
GGAAACCAGCCAAAAAGACT+CGG | - | chr3.1:36004197-36004216 | None:intergenic | 45.0% | |
GGACTCAAACTTTATGACCC+TGG | + | chr3.1:36001105-36001124 | MS.gene82594:CDS | 45.0% | |
GTAACAGACATGACACAGAC+AGG | - | chr3.1:36004841-36004860 | None:intergenic | 45.0% | |
GTATACACTGCTATTGCTGG+AGG | + | chr3.1:36004312-36004331 | MS.gene82594:CDS | 45.0% | |
TATCGAATGCCTCAAAGAGG+CGG | + | chr3.1:36005748-36005767 | MS.gene82594:CDS | 45.0% | |
TCAACACTCAGCTTTACCAC+AGG | + | chr3.1:36001949-36001968 | MS.gene82594:CDS | 45.0% | |
TCTAGGAAACGAAAGCTCAG+TGG | + | chr3.1:36004691-36004710 | MS.gene82594:intron | 45.0% | |
TCTCAGCCAATTCCTCAATG+GGG | - | chr3.1:36001209-36001228 | None:intergenic | 45.0% | |
TTGTTGGATGGAAGAACAGG+TGG | - | chr3.1:36003582-36003601 | None:intergenic | 45.0% | |
! | ACCGTTGTTGATGAACGTAC+TGG | + | chr3.1:36000541-36000560 | MS.gene82594:CDS | 45.0% |
! | AGTGTTTTCCATTGTTGGCC+GGG | + | chr3.1:36004780-36004799 | MS.gene82594:CDS | 45.0% |
! | CCCCTGATTAGTTGGTCATT+GGG | + | chr3.1:36000953-36000972 | MS.gene82594:intron | 45.0% |
! | CCGTTGTTGATGAACGTACT+GGG | + | chr3.1:36000542-36000561 | MS.gene82594:CDS | 45.0% |
! | TATGTAGGTTGCTGTTGCCT+TGG | + | chr3.1:36005072-36005091 | MS.gene82594:intron | 45.0% |
! | TGATTAGTTGGTCATTGGGC+CGG | + | chr3.1:36000957-36000976 | MS.gene82594:intron | 45.0% |
!! | AGCTTTACCACAGGGTGTTT+TGG | + | chr3.1:36001958-36001977 | MS.gene82594:CDS | 45.0% |
!! | GTGTTACTTACTCTGAGAGC+AGG | - | chr3.1:36002687-36002706 | None:intergenic | 45.0% |
!! | TTGTCGGTGTTACTTCCACT+CGG | - | chr3.1:36005711-36005730 | None:intergenic | 45.0% |
!!! | AATTATGATTAAATATTTTT+TGG | + | chr3.1:36001730-36001749 | MS.gene82594:intron | 5.0% |
!!! | ATTATGATTAAATATTTTTT+GGG | + | chr3.1:36001731-36001750 | MS.gene82594:intron | 5.0% |
AAGCTCACCAAAACACCCTG+TGG | - | chr3.1:36001968-36001987 | None:intergenic | 50.0% | |
CATAAAAGCAGGGCCATGTC+AGG | - | chr3.1:36001771-36001790 | None:intergenic | 50.0% | |
CCCATAGGATGTGCATCTTG+AGG | - | chr3.1:36002612-36002631 | None:intergenic | 50.0% | |
CTGAGAGCAGGATTTGCATC+AGG | - | chr3.1:36002675-36002694 | None:intergenic | 50.0% | |
CTGGATACTTGGCACATTGG+CGG | + | chr3.1:36005336-36005355 | MS.gene82594:CDS | 50.0% | |
CTGGTTTCCTGCAGACAGTT+TGG | + | chr3.1:36004208-36004227 | MS.gene82594:intron | 50.0% | |
GAGCAGTGAGGGTGGATAAA+CGG | - | chr3.1:36000417-36000436 | None:intergenic | 50.0% | |
GCACGAGTTAGACGAGGATT+AGG | - | chr3.1:36004048-36004067 | None:intergenic | 50.0% | |
GCCTCAAGATGCACATCCTA+TGG | + | chr3.1:36002608-36002627 | MS.gene82594:CDS | 50.0% | |
GGAAGTAACACCGACAAGCT+TGG | + | chr3.1:36005714-36005733 | MS.gene82594:CDS | 50.0% | |
GGCCCAATGACCAACTAATC+AGG | - | chr3.1:36000958-36000977 | None:intergenic | 50.0% | |
GGTGAGCGTTCCTTTGACAT+TGG | - | chr3.1:36000524-36000543 | None:intergenic | 50.0% | |
GTGCCAAGTATCCAGCCATA+CGG | - | chr3.1:36005331-36005350 | None:intergenic | 50.0% | |
GTTCCTTTGACATTGGACGG+TGG | - | chr3.1:36000517-36000536 | None:intergenic | 50.0% | |
TCGTTAGCTCCACCATGAAG+AGG | - | chr3.1:36004357-36004376 | None:intergenic | 50.0% | |
TCTCCACCGTCCAATGTCAA+AGG | + | chr3.1:36000511-36000530 | MS.gene82594:CDS | 50.0% | |
TGCCAAGTATCCAGCCATAC+GGG | - | chr3.1:36005330-36005349 | None:intergenic | 50.0% | |
TGGAGAGATCCCAGAAGAAG+CGG | - | chr3.1:36000497-36000516 | None:intergenic | 50.0% | |
TGGATACTTGGCACATTGGC+GGG | + | chr3.1:36005337-36005356 | MS.gene82594:CDS | 50.0% | |
TGGCTGGATACTTGGCACAT+TGG | + | chr3.1:36005333-36005352 | MS.gene82594:CDS | 50.0% | |
! | ACTGCTATTGCTGGAGGTGT+TGG | + | chr3.1:36004318-36004337 | MS.gene82594:CDS | 50.0% |
! | GCCCCTGATTAGTTGGTCAT+TGG | + | chr3.1:36000952-36000971 | MS.gene82594:intron | 50.0% |
! | TCTTCATGGTGGAGCTAACG+AGG | + | chr3.1:36004356-36004375 | MS.gene82594:CDS | 50.0% |
!! | CTGACATGGCCCTGCTTTTA+TGG | + | chr3.1:36001769-36001788 | MS.gene82594:intron | 50.0% |
!! | CTTCTCCGAGTCTTTTTGGC+TGG | + | chr3.1:36004189-36004208 | MS.gene82594:intron | 50.0% |
!! | GGAGGTGTTGGAGCTCTATA+TGG | + | chr3.1:36004330-36004349 | MS.gene82594:CDS | 50.0% |
!! | GGCTGAGAAAAGCACCTTTC+CGG | + | chr3.1:36001221-36001240 | MS.gene82594:CDS | 50.0% |
AAGAAGCGGAGAGGTGGAGA+GGG | - | chr3.1:36000483-36000502 | None:intergenic | 55.0% | |
AGATCCCAGAAGAAGCGGAG+AGG | - | chr3.1:36000492-36000511 | None:intergenic | 55.0% | |
AGGAAGCAGGTGAGCAGTGA+GGG | - | chr3.1:36000428-36000447 | None:intergenic | 55.0% | |
CAAAGGATCCCGGCCAACAA+TGG | - | chr3.1:36004791-36004810 | None:intergenic | 55.0% | |
CCAAGTATCCAGCCATACGG+GGG | - | chr3.1:36005328-36005347 | None:intergenic | 55.0% | |
CTGTACGCCACCTTGCATCA+AGG | + | chr3.1:36004124-36004143 | MS.gene82594:CDS | 55.0% | |
GCCAAGTATCCAGCCATACG+GGG | - | chr3.1:36005329-36005348 | None:intergenic | 55.0% | |
TAGGAAGCAGGTGAGCAGTG+AGG | - | chr3.1:36000429-36000448 | None:intergenic | 55.0% | |
TCCACCTCTCCGCTTCTTCT+GGG | + | chr3.1:36000485-36000504 | MS.gene82594:CDS | 55.0% | |
TCCAGTGCACGAGTTAGACG+AGG | - | chr3.1:36004054-36004073 | None:intergenic | 55.0% | |
TCCTCGTCTAACTCGTGCAC+TGG | + | chr3.1:36004050-36004069 | MS.gene82594:CDS | 55.0% | |
TGATGCAAGGTGGCGTACAG+CGG | - | chr3.1:36004124-36004143 | None:intergenic | 55.0% | |
TGGCCGGGATCCTTTGATTG+AGG | + | chr3.1:36004795-36004814 | MS.gene82594:CDS | 55.0% | |
! | AGACTCATGCTAGTGGACGG+TGG | + | chr3.1:36000924-36000943 | MS.gene82594:intron | 55.0% |
! | ATGCTAGTGGACGGTGGGAT+TGG | + | chr3.1:36000930-36000949 | MS.gene82594:intron | 55.0% |
! | GACTCATGCTAGTGGACGGT+GGG | + | chr3.1:36000925-36000944 | MS.gene82594:intron | 55.0% |
! | TTTGCTATCCCCCGTATGGC+TGG | + | chr3.1:36005317-36005336 | MS.gene82594:CDS | 55.0% |
!! | GGGATTGGCCCCTGATTAGT+TGG | + | chr3.1:36000945-36000964 | MS.gene82594:intron | 55.0% |
!! | TTGGCTTTGACGGTGCCATC+AGG | - | chr3.1:36000592-36000611 | None:intergenic | 55.0% |
AAGCAGGTGAGCAGTGAGGG+TGG | - | chr3.1:36000425-36000444 | None:intergenic | 60.0% | |
CCCCCGTATGGCTGGATACT+TGG | + | chr3.1:36005325-36005344 | MS.gene82594:CDS | 60.0% | |
CGAAGATGCACGACGCTGCA+CGG | + | chr3.1:36000389-36000408 | MS.gene82594:CDS | 60.0% | |
CTCCACCTCTCCGCTTCTTC+TGG | + | chr3.1:36000484-36000503 | MS.gene82594:CDS | 60.0% | |
GAAGAAGCGGAGAGGTGGAG+AGG | - | chr3.1:36000484-36000503 | None:intergenic | 60.0% | |
GCGGGAGTCCTTGGATGATC+CGG | + | chr3.1:36005355-36005374 | MS.gene82594:CDS | 60.0% | |
GGTCATTGGGCCGGATATGC+TGG | + | chr3.1:36000966-36000985 | MS.gene82594:intron | 60.0% | |
TCCAGCAAGCCGCCTCTTTG+AGG | - | chr3.1:36005760-36005779 | None:intergenic | 60.0% | |
TCCCAGAAGAAGCGGAGAGG+TGG | - | chr3.1:36000489-36000508 | None:intergenic | 60.0% | |
!! | AAGAGGCGGCTTGCTGGATC+TGG | + | chr3.1:36005762-36005781 | MS.gene82594:CDS | 60.0% |
!! | AGAGGCGGCTTGCTGGATCT+GGG | + | chr3.1:36005763-36005782 | MS.gene82594:CDS | 60.0% |
!! | AGGTGGTGGAGGTAGGAAGC+AGG | - | chr3.1:36000441-36000460 | None:intergenic | 60.0% |
AAGCGGAGAGGTGGAGAGGG+TGG | - | chr3.1:36000480-36000499 | None:intergenic | 65.0% | |
GCCTCAAAGAGGCGGCTTGC+TGG | + | chr3.1:36005756-36005775 | MS.gene82594:CDS | 65.0% | |
GGCACATTGGCGGGAGTCCT+TGG | + | chr3.1:36005346-36005365 | MS.gene82594:CDS | 65.0% | |
CGGAGAGGTGGAGAGGGTGG+AGG | - | chr3.1:36000477-36000496 | None:intergenic | 70.0% | |
GTGGAGAGGGTGGAGGAGCG+CGG | - | chr3.1:36000470-36000489 | None:intergenic | 70.0% | |
!! | GCGGAGGAGGTGGTGGAGGT+AGG | - | chr3.1:36000448-36000467 | None:intergenic | 70.0% |
! | GAGAGGGTGGAGGAGCGCGG+CGG | - | chr3.1:36000467-36000486 | None:intergenic | 75.0% |
! | GAGCGCGGCGGAGGAGGTGG+TGG | - | chr3.1:36000455-36000474 | None:intergenic | 80.0% |
!! | AGGGTGGAGGAGCGCGGCGG+AGG | - | chr3.1:36000464-36000483 | None:intergenic | 80.0% |
!! | CGCGGCGGAGGAGGTGGTGG+AGG | - | chr3.1:36000452-36000471 | None:intergenic | 80.0% |
!! | GAGGAGCGCGGCGGAGGAGG+TGG | - | chr3.1:36000458-36000477 | None:intergenic | 80.0% |
!! | GTGGAGGAGCGCGGCGGAGG+AGG | - | chr3.1:36000461-36000480 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.1 | gene | 36000361 | 36005791 | 36000361 | ID=MS.gene82594 |
chr3.1 | mRNA | 36000361 | 36005791 | 36000361 | ID=MS.gene82594.t1;Parent=MS.gene82594 |
chr3.1 | exon | 36000361 | 36000624 | 36000361 | ID=MS.gene82594.t1.exon1;Parent=MS.gene82594.t1 |
chr3.1 | CDS | 36000361 | 36000624 | 36000361 | ID=cds.MS.gene82594.t1;Parent=MS.gene82594.t1 |
chr3.1 | exon | 36001081 | 36001261 | 36001081 | ID=MS.gene82594.t1.exon2;Parent=MS.gene82594.t1 |
chr3.1 | CDS | 36001081 | 36001261 | 36001081 | ID=cds.MS.gene82594.t1;Parent=MS.gene82594.t1 |
chr3.1 | exon | 36001894 | 36001979 | 36001894 | ID=MS.gene82594.t1.exon3;Parent=MS.gene82594.t1 |
chr3.1 | CDS | 36001894 | 36001979 | 36001894 | ID=cds.MS.gene82594.t1;Parent=MS.gene82594.t1 |
chr3.1 | exon | 36002591 | 36002695 | 36002591 | ID=MS.gene82594.t1.exon4;Parent=MS.gene82594.t1 |
chr3.1 | CDS | 36002591 | 36002695 | 36002591 | ID=cds.MS.gene82594.t1;Parent=MS.gene82594.t1 |
chr3.1 | exon | 36003322 | 36003384 | 36003322 | ID=MS.gene82594.t1.exon5;Parent=MS.gene82594.t1 |
chr3.1 | CDS | 36003322 | 36003384 | 36003322 | ID=cds.MS.gene82594.t1;Parent=MS.gene82594.t1 |
chr3.1 | exon | 36003534 | 36003643 | 36003534 | ID=MS.gene82594.t1.exon6;Parent=MS.gene82594.t1 |
chr3.1 | CDS | 36003534 | 36003643 | 36003534 | ID=cds.MS.gene82594.t1;Parent=MS.gene82594.t1 |
chr3.1 | exon | 36004026 | 36004145 | 36004026 | ID=MS.gene82594.t1.exon7;Parent=MS.gene82594.t1 |
chr3.1 | CDS | 36004026 | 36004145 | 36004026 | ID=cds.MS.gene82594.t1;Parent=MS.gene82594.t1 |
chr3.1 | exon | 36004302 | 36004377 | 36004302 | ID=MS.gene82594.t1.exon8;Parent=MS.gene82594.t1 |
chr3.1 | CDS | 36004302 | 36004377 | 36004302 | ID=cds.MS.gene82594.t1;Parent=MS.gene82594.t1 |
chr3.1 | exon | 36004485 | 36004558 | 36004485 | ID=MS.gene82594.t1.exon9;Parent=MS.gene82594.t1 |
chr3.1 | CDS | 36004485 | 36004558 | 36004485 | ID=cds.MS.gene82594.t1;Parent=MS.gene82594.t1 |
chr3.1 | exon | 36004696 | 36004816 | 36004696 | ID=MS.gene82594.t1.exon10;Parent=MS.gene82594.t1 |
chr3.1 | CDS | 36004696 | 36004816 | 36004696 | ID=cds.MS.gene82594.t1;Parent=MS.gene82594.t1 |
chr3.1 | exon | 36005079 | 36005176 | 36005079 | ID=MS.gene82594.t1.exon11;Parent=MS.gene82594.t1 |
chr3.1 | CDS | 36005079 | 36005176 | 36005079 | ID=cds.MS.gene82594.t1;Parent=MS.gene82594.t1 |
chr3.1 | exon | 36005280 | 36005403 | 36005280 | ID=MS.gene82594.t1.exon12;Parent=MS.gene82594.t1 |
chr3.1 | CDS | 36005280 | 36005403 | 36005280 | ID=cds.MS.gene82594.t1;Parent=MS.gene82594.t1 |
chr3.1 | exon | 36005654 | 36005791 | 36005654 | ID=MS.gene82594.t1.exon13;Parent=MS.gene82594.t1 |
chr3.1 | CDS | 36005654 | 36005791 | 36005654 | ID=cds.MS.gene82594.t1;Parent=MS.gene82594.t1 |
Gene Sequence |
Protein sequence |