Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82712.t1 | XP_003600057.1 | 97.2 | 435 | 10 | 1 | 1 | 435 | 1 | 433 | 3.40E-259 | 903.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82712.t1 | Q9LJU7 | 74.2 | 431 | 111 | 0 | 5 | 435 | 7 | 437 | 5.2e-208 | 724.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82712.t1 | G7IXK7 | 97.2 | 435 | 10 | 1 | 1 | 435 | 1 | 433 | 2.4e-259 | 903.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene82712 | MS.gene24675 | PPI |
| MS.gene24727 | MS.gene82712 | PPI |
| MS.gene007238 | MS.gene82712 | PPI |
| MS.gene050332 | MS.gene82712 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82712.t1 | MTR_3g051240 | 97.241 | 435 | 10 | 1 | 1 | 435 | 1 | 433 | 0.0 | 877 |
| MS.gene82712.t1 | MTR_5g092360 | 79.621 | 422 | 84 | 1 | 16 | 435 | 18 | 439 | 0.0 | 729 |
| MS.gene82712.t1 | MTR_1g060360 | 60.808 | 421 | 161 | 3 | 1 | 418 | 1 | 420 | 0.0 | 536 |
| MS.gene82712.t1 | MTR_7g104330 | 57.710 | 428 | 178 | 3 | 5 | 430 | 15 | 441 | 0.0 | 527 |
| MS.gene82712.t1 | MTR_7g104360 | 59.091 | 418 | 165 | 5 | 9 | 422 | 12 | 427 | 5.37e-176 | 499 |
| MS.gene82712.t1 | MTR_0188s0020 | 43.852 | 431 | 207 | 13 | 15 | 412 | 26 | 454 | 1.90e-104 | 318 |
| MS.gene82712.t1 | MTR_4g115670 | 42.067 | 416 | 212 | 8 | 45 | 434 | 55 | 467 | 6.54e-102 | 311 |
| MS.gene82712.t1 | MTR_4g037105 | 42.227 | 431 | 214 | 12 | 15 | 412 | 20 | 448 | 2.98e-99 | 305 |
| MS.gene82712.t1 | MTR_6g013050 | 38.430 | 484 | 199 | 11 | 21 | 413 | 52 | 527 | 9.93e-99 | 307 |
| MS.gene82712.t1 | MTR_7g056403 | 38.365 | 477 | 192 | 9 | 45 | 422 | 70 | 543 | 7.28e-96 | 298 |
| MS.gene82712.t1 | MTR_3g083810 | 39.738 | 458 | 183 | 9 | 45 | 412 | 71 | 525 | 1.26e-95 | 298 |
| MS.gene82712.t1 | MTR_1g112630 | 41.014 | 434 | 220 | 12 | 13 | 412 | 19 | 450 | 5.03e-95 | 294 |
| MS.gene82712.t1 | MTR_3g083820 | 39.606 | 457 | 187 | 10 | 45 | 413 | 71 | 526 | 9.66e-94 | 293 |
| MS.gene82712.t1 | MTR_6g013050 | 37.500 | 456 | 188 | 10 | 21 | 387 | 52 | 499 | 2.27e-88 | 279 |
| MS.gene82712.t1 | MTR_1g052505 | 31.045 | 335 | 181 | 12 | 58 | 349 | 209 | 536 | 1.45e-35 | 139 |
| MS.gene82712.t1 | MTR_4g037670 | 29.819 | 332 | 186 | 9 | 58 | 349 | 231 | 555 | 6.28e-35 | 137 |
| MS.gene82712.t1 | MTR_4g082930 | 26.327 | 471 | 262 | 15 | 45 | 434 | 144 | 610 | 2.31e-26 | 112 |
| MS.gene82712.t1 | MTR_5g092450 | 61.250 | 80 | 11 | 1 | 308 | 387 | 8 | 67 | 4.22e-25 | 98.6 |
| MS.gene82712.t1 | MTR_3g074930 | 25.522 | 431 | 249 | 14 | 56 | 420 | 199 | 623 | 1.05e-24 | 107 |
| MS.gene82712.t1 | MTR_3g074930 | 25.522 | 431 | 249 | 14 | 56 | 420 | 192 | 616 | 3.05e-24 | 105 |
| MS.gene82712.t1 | MTR_5g092300 | 74.138 | 58 | 15 | 0 | 364 | 421 | 9 | 66 | 3.68e-24 | 95.9 |
| MS.gene82712.t1 | MTR_4g082940 | 26.942 | 412 | 227 | 15 | 39 | 384 | 138 | 541 | 1.80e-23 | 103 |
| MS.gene82712.t1 | MTR_4g103520 | 25.714 | 350 | 205 | 10 | 101 | 401 | 253 | 596 | 7.68e-23 | 101 |
| MS.gene82712.t1 | MTR_5g045600 | 25.833 | 360 | 210 | 11 | 101 | 410 | 245 | 597 | 8.75e-23 | 101 |
| MS.gene82712.t1 | MTR_4g103520 | 25.714 | 350 | 205 | 10 | 101 | 401 | 176 | 519 | 1.01e-22 | 100 |
| MS.gene82712.t1 | MTR_3g074970 | 25.000 | 420 | 218 | 14 | 58 | 421 | 143 | 521 | 2.59e-22 | 99.8 |
| MS.gene82712.t1 | MTR_8g063080 | 26.536 | 358 | 210 | 12 | 101 | 410 | 238 | 590 | 5.41e-22 | 99.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82712.t1 | AT3G20500 | 74.246 | 431 | 111 | 0 | 5 | 435 | 7 | 437 | 0.0 | 702 |
| MS.gene82712.t1 | AT3G52820 | 62.051 | 390 | 144 | 2 | 27 | 415 | 32 | 418 | 0.0 | 520 |
| MS.gene82712.t1 | AT3G52780 | 58.156 | 423 | 168 | 7 | 6 | 420 | 4 | 425 | 1.33e-175 | 498 |
| MS.gene82712.t1 | AT3G52810 | 57.075 | 424 | 177 | 4 | 5 | 424 | 10 | 432 | 1.21e-174 | 496 |
| MS.gene82712.t1 | AT3G52780 | 57.186 | 334 | 135 | 6 | 6 | 332 | 4 | 336 | 7.40e-133 | 387 |
| MS.gene82712.t1 | AT5G34850 | 40.227 | 440 | 229 | 10 | 3 | 410 | 7 | 444 | 1.85e-101 | 310 |
| MS.gene82712.t1 | AT4G36350 | 39.910 | 446 | 231 | 13 | 2 | 412 | 5 | 448 | 2.25e-99 | 305 |
| MS.gene82712.t1 | AT1G56360 | 39.732 | 448 | 229 | 13 | 4 | 412 | 3 | 448 | 1.04e-97 | 301 |
| MS.gene82712.t1 | AT3G07130 | 40.411 | 438 | 176 | 6 | 60 | 413 | 80 | 516 | 1.39e-95 | 297 |
| MS.gene82712.t1 | AT2G27190 | 38.544 | 467 | 243 | 14 | 1 | 429 | 7 | 467 | 1.52e-92 | 287 |
| MS.gene82712.t1 | AT2G16430 | 40.181 | 443 | 230 | 14 | 3 | 412 | 12 | 452 | 1.67e-90 | 282 |
| MS.gene82712.t1 | AT3G07130 | 37.580 | 471 | 176 | 7 | 60 | 413 | 80 | 549 | 8.95e-89 | 281 |
| MS.gene82712.t1 | AT2G18130 | 38.322 | 441 | 224 | 14 | 3 | 412 | 6 | 429 | 1.37e-87 | 274 |
| MS.gene82712.t1 | AT4G13700 | 39.252 | 428 | 190 | 9 | 7 | 366 | 12 | 437 | 3.25e-86 | 271 |
| MS.gene82712.t1 | AT2G16430 | 42.638 | 326 | 163 | 8 | 111 | 412 | 7 | 332 | 1.45e-75 | 239 |
| MS.gene82712.t1 | AT2G32770 | 34.120 | 466 | 209 | 10 | 45 | 412 | 69 | 534 | 6.21e-71 | 233 |
| MS.gene82712.t1 | AT4G13700 | 36.829 | 391 | 177 | 9 | 7 | 329 | 12 | 400 | 2.28e-67 | 221 |
| MS.gene82712.t1 | AT3G46120 | 33.560 | 441 | 192 | 15 | 3 | 412 | 6 | 376 | 2.11e-64 | 212 |
| MS.gene82712.t1 | AT2G32770 | 35.792 | 366 | 161 | 5 | 95 | 386 | 62 | 427 | 1.69e-62 | 208 |
| MS.gene82712.t1 | AT2G32770 | 30.258 | 466 | 198 | 11 | 45 | 412 | 69 | 505 | 4.13e-54 | 188 |
| MS.gene82712.t1 | AT1G52940 | 36.404 | 228 | 127 | 9 | 45 | 255 | 15 | 241 | 1.14e-33 | 127 |
| MS.gene82712.t1 | AT1G13900 | 25.771 | 454 | 258 | 16 | 45 | 425 | 145 | 592 | 2.56e-24 | 106 |
| MS.gene82712.t1 | AT2G03450 | 26.711 | 453 | 245 | 17 | 45 | 419 | 143 | 586 | 3.14e-24 | 105 |
| MS.gene82712.t1 | AT1G13750 | 26.648 | 349 | 203 | 10 | 101 | 401 | 239 | 582 | 3.14e-22 | 99.8 |
| MS.gene82712.t1 | AT4G24890 | 27.193 | 342 | 190 | 12 | 101 | 392 | 241 | 573 | 1.67e-21 | 97.8 |
| MS.gene82712.t1 | AT5G50400 | 24.550 | 444 | 264 | 18 | 14 | 401 | 80 | 508 | 1.75e-21 | 97.4 |
| MS.gene82712.t1 | AT5G50400 | 24.550 | 444 | 264 | 18 | 14 | 401 | 152 | 580 | 1.78e-21 | 97.4 |
Find 105 sgRNAs with CRISPR-Local
Find 212 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCCATCACCGATTGTTATA+TGG | 0.253892 | 3.1:+38218141 | None:intergenic |
| AAAATACACCATACGGTAAT+AGG | 0.278034 | 3.1:-38220128 | MS.gene82712:CDS |
| CCGACCACAGCAAAACTAAT+TGG | 0.291168 | 3.1:+38220020 | None:intergenic |
| CGGTAAAAGTAAACAGAATT+CGG | 0.311835 | 3.1:+38220095 | None:intergenic |
| ACGTGTATATAATGGAAAAT+TGG | 0.322130 | 3.1:-38218180 | MS.gene82712:CDS |
| TTTACTCAGAACAATATAAA+TGG | 0.326440 | 3.1:-38219650 | MS.gene82712:CDS |
| GGAGCATATACCATTGTTAA+AGG | 0.331899 | 3.1:-38219805 | MS.gene82712:CDS |
| TAAACTCAACACATGCCTTC+TGG | 0.336522 | 3.1:-38217871 | MS.gene82712:CDS |
| TAGCTCACCATGACCGAAAC+TGG | 0.338203 | 3.1:+38217901 | None:intergenic |
| TTATATCTTATAATTCTAGA+TGG | 0.338357 | 3.1:-38219776 | MS.gene82712:CDS |
| TTACAGAAACGTGTATATAA+TGG | 0.356920 | 3.1:-38218188 | MS.gene82712:intron |
| TTTGCTGTGGTCGGAGATCT+TGG | 0.363118 | 3.1:-38220011 | MS.gene82712:CDS |
| CGGTAAAATCTGATGATATC+TGG | 0.377504 | 3.1:-38217820 | MS.gene82712:CDS |
| ACCCTCTTCTTATCCTCAAC+AGG | 0.393195 | 3.1:-38220849 | MS.gene82712:intron |
| ACGAAAGGTCGCCAGGAATC+AGG | 0.398861 | 3.1:+38219928 | None:intergenic |
| CCGGCTCGTCGTCATCATTC+CGG | 0.400908 | 3.1:+38217840 | None:intergenic |
| TATGATGTTAACCTGATTCC+TGG | 0.403592 | 3.1:-38219939 | MS.gene82712:CDS |
| GATATGATCTAGTGTTGATT+TGG | 0.419534 | 3.1:+38219974 | None:intergenic |
| TCGGCATACGAAAGGTCGCC+AGG | 0.422584 | 3.1:+38219921 | None:intergenic |
| TTGATTTGGTCCAACCAGTT+TGG | 0.423131 | 3.1:+38219988 | None:intergenic |
| CAGCATCGTTGGGACACATT+TGG | 0.428035 | 3.1:-38219891 | MS.gene82712:CDS |
| GGTAAAAGTAAACAGAATTC+GGG | 0.429578 | 3.1:+38220096 | None:intergenic |
| TAAACAGAATTCGGGTCTAA+AGG | 0.433935 | 3.1:+38220104 | None:intergenic |
| AGAATCCCATGGAAGATGTA+AGG | 0.437809 | 3.1:+38220874 | None:intergenic |
| GAATTCCGTGAAGCCAGTTT+CGG | 0.439094 | 3.1:-38217914 | MS.gene82712:CDS |
| CAGGTACACATTTCATTGGC+AGG | 0.442548 | 3.1:-38220293 | MS.gene82712:CDS |
| TTCCCTTGTGTTACCATCCA+TGG | 0.444697 | 3.1:+38219837 | None:intergenic |
| GTAGAAAATGTAACTGTAAG+AGG | 0.446204 | 3.1:+38220160 | None:intergenic |
| CATGACCGAAACTGGCTTCA+CGG | 0.449213 | 3.1:+38217909 | None:intergenic |
| TGTCAAAGGTGGACAGGAAA+AGG | 0.453174 | 3.1:-38218456 | MS.gene82712:CDS |
| GTTGAATACGGAACATTGCC+AGG | 0.455622 | 3.1:-38220215 | MS.gene82712:CDS |
| GGTGCTCACATTATCATGCT+TGG | 0.459315 | 3.1:-38219693 | MS.gene82712:CDS |
| GCACCTTCAGTTGTTGAATA+CGG | 0.463880 | 3.1:-38220227 | MS.gene82712:CDS |
| ATTCCAGGTACACATTTCAT+TGG | 0.465152 | 3.1:-38220297 | MS.gene82712:intron |
| AAACAGAATTCGGGTCTAAA+GGG | 0.466102 | 3.1:+38220105 | None:intergenic |
| GTAAACATCATAATCATCAT+AGG | 0.470193 | 3.1:+38219668 | None:intergenic |
| CATATACCATTGTTAAAGGA+TGG | 0.490135 | 3.1:-38219801 | MS.gene82712:CDS |
| AGGTGAAGGTGGTGATATGA+TGG | 0.490466 | 3.1:-38218374 | MS.gene82712:CDS |
| TTGTCATATTTCATGTCCCA+TGG | 0.496286 | 3.1:-38218420 | MS.gene82712:CDS |
| AGATTTGTCATCGGTGATCC+AGG | 0.500331 | 3.1:+38220250 | None:intergenic |
| AATTCTGACCACTTCGGCTG+TGG | 0.500874 | 3.1:+38217932 | None:intergenic |
| CGACTATATTCAGCATCGTT+GGG | 0.501801 | 3.1:-38219901 | MS.gene82712:CDS |
| CGTGAAGCCAGTTTCGGTCA+TGG | 0.504454 | 3.1:-38217908 | MS.gene82712:CDS |
| AGGGGTTGTTTAACCTGTTG+AGG | 0.506972 | 3.1:+38220836 | None:intergenic |
| CAGATCTGTCAAAGGTGGAC+AGG | 0.507152 | 3.1:-38218462 | MS.gene82712:CDS |
| CAACACATGCCTTCTGGAGT+TGG | 0.510276 | 3.1:-38217865 | MS.gene82712:CDS |
| CCGACTATATTCAGCATCGT+TGG | 0.510775 | 3.1:-38219902 | MS.gene82712:CDS |
| GTCGGAGATCTTGGCCAAAC+TGG | 0.511189 | 3.1:-38220002 | MS.gene82712:CDS |
| TAGATGGAAAATGCCGTATG+AGG | 0.514364 | 3.1:-38219760 | MS.gene82712:CDS |
| GGTTAACATCATATCTGCAT+TGG | 0.528534 | 3.1:+38219949 | None:intergenic |
| CTCGATCCACTTTCCTCATA+CGG | 0.534737 | 3.1:+38219747 | None:intergenic |
| AGCATAAAGCAATGGCTCCA+TGG | 0.538411 | 3.1:+38218348 | None:intergenic |
| ATAACATCTTTAGTTAACTC+AGG | 0.542238 | 3.1:-38217797 | MS.gene82712:CDS |
| AAACTAATTGGAAATTGAGC+TGG | 0.542505 | 3.1:+38220032 | None:intergenic |
| GCTACATTGTCATACTTCCC+TGG | 0.548538 | 3.1:+38220197 | None:intergenic |
| AGAACAATATAAATGGCTAA+AGG | 0.548688 | 3.1:-38219643 | MS.gene82712:intron |
| GAATATAGTCGGCATACGAA+AGG | 0.549941 | 3.1:+38219913 | None:intergenic |
| ATGCCTTCTGGAGTTGGCAC+CGG | 0.559442 | 3.1:-38217859 | MS.gene82712:CDS |
| ACCTGTTGAGGATAAGAAGA+GGG | 0.559968 | 3.1:+38220848 | None:intergenic |
| CATATAACAATCGGTGATGG+AGG | 0.560182 | 3.1:-38218140 | MS.gene82712:CDS |
| GTCCATATAACAATCGGTGA+TGG | 0.569269 | 3.1:-38218143 | MS.gene82712:CDS |
| ATAAATCCATCCTTTAACAA+TGG | 0.573286 | 3.1:+38219795 | None:intergenic |
| GAGATCTTGGCCAAACTGGT+TGG | 0.574404 | 3.1:-38219998 | MS.gene82712:CDS |
| GGTGATGGAGGGAACAAAGA+AGG | 0.574485 | 3.1:-38218128 | MS.gene82712:CDS |
| TGCTAGTTCTAGACCATGGA+TGG | 0.576530 | 3.1:-38219850 | MS.gene82712:CDS |
| CTGTGTTACTATTATACCAT+GGG | 0.577355 | 3.1:+38218404 | None:intergenic |
| AATAGTAACACAGCTCATCA+AGG | 0.589055 | 3.1:-38218394 | MS.gene82712:CDS |
| CCAACGATGCTGAATATAGT+CGG | 0.594807 | 3.1:+38219902 | None:intergenic |
| TTGAACTTGAAGTTACTGAC+AGG | 0.597052 | 3.1:+38220933 | None:intergenic |
| CTAAAGGGCCTATTACCGTA+TGG | 0.597834 | 3.1:+38220120 | None:intergenic |
| CGGGACCTTGTCCACCGCAT+CGG | 0.603027 | 3.1:+38220075 | None:intergenic |
| ATTCCGGTGCCAACTCCAGA+AGG | 0.606814 | 3.1:+38217856 | None:intergenic |
| GAAGAGGGTTTAGAATCCCA+TGG | 0.606891 | 3.1:+38220863 | None:intergenic |
| ATATAGATCCACAGCCGAAG+TGG | 0.607631 | 3.1:-38217940 | MS.gene82712:CDS |
| CCGGAATGATGACGACGAGC+CGG | 0.609207 | 3.1:-38217840 | MS.gene82712:CDS |
| TGTCCACGCATATGAACGCT+CGG | 0.615743 | 3.1:-38218296 | MS.gene82712:intron |
| AACACAGCTCATCAAGGTGA+AGG | 0.620113 | 3.1:-38218388 | MS.gene82712:CDS |
| AAGTATGACAATGTAGCTGA+AGG | 0.620469 | 3.1:-38220191 | MS.gene82712:CDS |
| ATCGTTGGGACACATTTGGT+AGG | 0.621533 | 3.1:-38219887 | MS.gene82712:CDS |
| TGAAATATGACAAGCAACCA+AGG | 0.623138 | 3.1:+38218430 | None:intergenic |
| ACAAGCATATGAGAGTTACC+TGG | 0.624277 | 3.1:-38220268 | MS.gene82712:CDS |
| ACGCTAGCAGCATAAAGCAA+TGG | 0.624653 | 3.1:+38218340 | None:intergenic |
| TGAAGGTGCAGATTTGTCAT+CGG | 0.625697 | 3.1:+38220241 | None:intergenic |
| TGGACAGGAAAAGGACACCT+TGG | 0.626466 | 3.1:-38218447 | MS.gene82712:CDS |
| CTAATTGGAAATTGAGCTGG+TGG | 0.628378 | 3.1:+38220035 | None:intergenic |
| GCTGTGTTACTATTATACCA+TGG | 0.628930 | 3.1:+38218403 | None:intergenic |
| TCACGGAATTCTGACCACTT+CGG | 0.636085 | 3.1:+38217926 | None:intergenic |
| AAAATGCCGTATGAGGAAAG+TGG | 0.636153 | 3.1:-38219753 | MS.gene82712:CDS |
| ACAGCTCATCAAGGTGAAGG+TGG | 0.636860 | 3.1:-38218385 | MS.gene82712:CDS |
| GGTGCTGTCCATATAACAAT+CGG | 0.638026 | 3.1:-38218149 | MS.gene82712:CDS |
| ATATAACAATCGGTGATGGA+GGG | 0.639292 | 3.1:-38218139 | MS.gene82712:CDS |
| GTTCCGTATTCAACAACTGA+AGG | 0.644804 | 3.1:+38220224 | None:intergenic |
| AACACAAGGGAATCATGAAG+TGG | 0.645673 | 3.1:-38219826 | MS.gene82712:CDS |
| TTGAATACGGAACATTGCCA+GGG | 0.650238 | 3.1:-38220214 | MS.gene82712:CDS |
| AACCTGTTGAGGATAAGAAG+AGG | 0.651905 | 3.1:+38220847 | None:intergenic |
| TGGTGATATGATGGAAACCA+TGG | 0.664924 | 3.1:-38218365 | MS.gene82712:CDS |
| ACAGACAGATCTGTCAAAGG+TGG | 0.665722 | 3.1:-38218467 | MS.gene82712:intron |
| CACTTGCTAGTTCTAGACCA+TGG | 0.671317 | 3.1:-38219854 | MS.gene82712:CDS |
| TGAACAGACAGATCTGTCAA+AGG | 0.671985 | 3.1:-38218470 | MS.gene82712:intron |
| ATACCGAGCGTTCATATGCG+TGG | 0.676010 | 3.1:+38218293 | None:intergenic |
| CATGGTCTAGAACTAGCAAG+TGG | 0.681335 | 3.1:+38219855 | None:intergenic |
| AGACCATGGATGGTAACACA+AGG | 0.685999 | 3.1:-38219840 | MS.gene82712:CDS |
| GTTATATGGACAGCACCACA+AGG | 0.701668 | 3.1:+38218155 | None:intergenic |
| AATGGAAAATTGGATCCTTG+TGG | 0.706470 | 3.1:-38218170 | MS.gene82712:CDS |
| GACCATGGATGGTAACACAA+GGG | 0.712669 | 3.1:-38219839 | MS.gene82712:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATGTATGTATAAATATAA+AGG | - | chr3.1:38219893-38219912 | MS.gene82712:CDS | 10.0% |
| !! | TATGTATGTATAAATATAAA+GGG | - | chr3.1:38219894-38219913 | MS.gene82712:CDS | 10.0% |
| !! | GAATATAGAAATTGAAAATT+AGG | + | chr3.1:38220100-38220119 | None:intergenic | 15.0% |
| !! | TTATATCTTATAATTCTAGA+TGG | - | chr3.1:38218937-38218956 | MS.gene82712:intron | 15.0% |
| !! | AAGTGAAAAAAGATATGAAA+TGG | - | chr3.1:38219288-38219307 | MS.gene82712:intron | 20.0% |
| !! | ATAAAGTAACATCCTTATAA+AGG | + | chr3.1:38218356-38218375 | None:intergenic | 20.0% |
| !! | ATAATATAAAGAAAACTCCA+AGG | + | chr3.1:38220181-38220200 | None:intergenic | 20.0% |
| !! | GATTAAGTAATAAAGCAAAA+GGG | + | chr3.1:38217949-38217968 | None:intergenic | 20.0% |
| !! | TGAAAACTTCAAAAAACATT+TGG | + | chr3.1:38220638-38220657 | None:intergenic | 20.0% |
| !! | TGATTAAGTAATAAAGCAAA+AGG | + | chr3.1:38217950-38217969 | None:intergenic | 20.0% |
| !! | TTTACTCAGAACAATATAAA+TGG | - | chr3.1:38219063-38219082 | MS.gene82712:intron | 20.0% |
| !!! | ATTATTTTCTGCACAAATTT+AGG | + | chr3.1:38220138-38220157 | None:intergenic | 20.0% |
| !!! | TAATTTTGCAGAAAAATATG+AGG | + | chr3.1:38217913-38217932 | None:intergenic | 20.0% |
| !!! | TTGGAGTTTTCTTTATATTA+TGG | - | chr3.1:38220180-38220199 | MS.gene82712:CDS | 20.0% |
| ! | AAATATGAGGTCATAAATGA+AGG | + | chr3.1:38217900-38217919 | None:intergenic | 25.0% |
| ! | AAATGTATAACTAAGCATAG+TGG | + | chr3.1:38219872-38219891 | None:intergenic | 25.0% |
| ! | AATATGAGGTCATAAATGAA+GGG | + | chr3.1:38217899-38217918 | None:intergenic | 25.0% |
| ! | AATTTGTGCAGAAAATAATC+CGG | - | chr3.1:38220139-38220158 | MS.gene82712:CDS | 25.0% |
| ! | AGAACAATATAAATGGCTAA+AGG | - | chr3.1:38219070-38219089 | MS.gene82712:intron | 25.0% |
| ! | AGAGAAGCAATAGTAATATT+TGG | + | chr3.1:38219636-38219655 | None:intergenic | 25.0% |
| ! | AGATATTATGTATCAACAGT+TGG | + | chr3.1:38219337-38219356 | None:intergenic | 25.0% |
| ! | ATAAATCCATCCTTTAACAA+TGG | + | chr3.1:38218921-38218940 | None:intergenic | 25.0% |
| ! | ATAACATCTTTAGTTAACTC+AGG | - | chr3.1:38220916-38220935 | MS.gene82712:CDS | 25.0% |
| ! | GTAAACATCATAATCATCAT+AGG | + | chr3.1:38219048-38219067 | None:intergenic | 25.0% |
| ! | TATCATTCTTACCATTTGTA+TGG | - | chr3.1:38220726-38220745 | MS.gene82712:intron | 25.0% |
| ! | TTACAGAAACGTGTATATAA+TGG | - | chr3.1:38220525-38220544 | MS.gene82712:intron | 25.0% |
| !! | ACGTGTATATAATGGAAAAT+TGG | - | chr3.1:38220533-38220552 | MS.gene82712:intron | 25.0% |
| !! | TTTTCAATGAGAATATGTCA+TGG | - | chr3.1:38219182-38219201 | MS.gene82712:intron | 25.0% |
| !! | TTTTCATAAGCTCATTGAAT+TGG | + | chr3.1:38218201-38218220 | None:intergenic | 25.0% |
| !!! | AAAAACTCTGAAGTTATTGT+AGG | - | chr3.1:38219923-38219942 | MS.gene82712:CDS | 25.0% |
| !!! | CATGTCAAAAAGTTATTTCT+AGG | - | chr3.1:38218104-38218123 | MS.gene82712:intron | 25.0% |
| !!! | CTATTTTTGTCATGTGTTTT+TGG | - | chr3.1:38218002-38218021 | MS.gene82712:intron | 25.0% |
| !!! | TATTATTCTTTTGAAGTTGC+TGG | - | chr3.1:38218999-38219018 | MS.gene82712:intron | 25.0% |
| !!! | TTTTAAGTATGTGGTTCATT+AGG | + | chr3.1:38219759-38219778 | None:intergenic | 25.0% |
| !!! | TTTTTTCACTTCTTGTTGTA+AGG | + | chr3.1:38219279-38219298 | None:intergenic | 25.0% |
| AAAAACCTTACATCTTCCAT+GGG | - | chr3.1:38217834-38217853 | MS.gene82712:CDS | 30.0% | |
| AAAATACACCATACGGTAAT+AGG | - | chr3.1:38218585-38218604 | MS.gene82712:intron | 30.0% | |
| AAAATTTAGTGAAGCTGCTA+AGG | - | chr3.1:38218130-38218149 | MS.gene82712:CDS | 30.0% | |
| AAACTAATTGGAAATTGAGC+TGG | + | chr3.1:38218684-38218703 | None:intergenic | 30.0% | |
| ACAAGACAAATGAAGAAAAC+TGG | + | chr3.1:38219389-38219408 | None:intergenic | 30.0% | |
| ACATTCCAAACAAATGGAAT+TGG | - | chr3.1:38219125-38219144 | MS.gene82712:intron | 30.0% | |
| ATAAATGGCTAAAGGTTAGT+TGG | - | chr3.1:38219078-38219097 | MS.gene82712:intron | 30.0% | |
| ATATGAGGTCATAAATGAAG+GGG | + | chr3.1:38217898-38217917 | None:intergenic | 30.0% | |
| ATCTTAAACGACACTTCAAA+AGG | + | chr3.1:38220699-38220718 | None:intergenic | 30.0% | |
| ATTCTTACCATTTGTATGGT+TGG | - | chr3.1:38220730-38220749 | MS.gene82712:intron | 30.0% | |
| CATATACCATTGTTAAAGGA+TGG | - | chr3.1:38218912-38218931 | MS.gene82712:intron | 30.0% | |
| CGGTAAAAGTAAACAGAATT+CGG | + | chr3.1:38218621-38218640 | None:intergenic | 30.0% | |
| CTAAAGATATGACTAGAATC+AGG | - | chr3.1:38219795-38219814 | MS.gene82712:CDS | 30.0% | |
| CTGATTCTAGTCATATCTTT+AGG | + | chr3.1:38219797-38219816 | None:intergenic | 30.0% | |
| GACTGTAATAACCTTATCAA+GGG | + | chr3.1:38219662-38219681 | None:intergenic | 30.0% | |
| GGATTCTATGTTGTTAATTC+CGG | + | chr3.1:38219558-38219577 | None:intergenic | 30.0% | |
| GGTAAAAGTAAACAGAATTC+GGG | + | chr3.1:38218620-38218639 | None:intergenic | 30.0% | |
| GTAGAAAATGTAACTGTAAG+AGG | + | chr3.1:38218556-38218575 | None:intergenic | 30.0% | |
| GTCATTACATTCCAAACAAA+TGG | - | chr3.1:38219119-38219138 | MS.gene82712:intron | 30.0% | |
| GTTGAACATGTTTCATTCAT+AGG | + | chr3.1:38219596-38219615 | None:intergenic | 30.0% | |
| TAGATCCAATTCCATTTGTT+TGG | + | chr3.1:38219133-38219152 | None:intergenic | 30.0% | |
| TATTATGTATCAACAGTTGG+AGG | + | chr3.1:38219334-38219353 | None:intergenic | 30.0% | |
| TCTGTAATTCACACAAGAAT+TGG | + | chr3.1:38220512-38220531 | None:intergenic | 30.0% | |
| TGAAGCTGTTTATTCAAACA+CGG | - | chr3.1:38218328-38218347 | MS.gene82712:CDS | 30.0% | |
| TGACTGTAATAACCTTATCA+AGG | + | chr3.1:38219663-38219682 | None:intergenic | 30.0% | |
| TTCTTACCATTTGTATGGTT+GGG | - | chr3.1:38220731-38220750 | MS.gene82712:intron | 30.0% | |
| ! | CAGATATCATCAGATTTTAC+CGG | + | chr3.1:38220895-38220914 | None:intergenic | 30.0% |
| ! | CTGTGTTACTATTATACCAT+GGG | + | chr3.1:38220312-38220331 | None:intergenic | 30.0% |
| !! | AAAACAGCTTATAGCTTGTT+TGG | - | chr3.1:38218217-38218236 | MS.gene82712:intron | 30.0% |
| !! | GATATGATCTAGTGTTGATT+TGG | + | chr3.1:38218742-38218761 | None:intergenic | 30.0% |
| !! | TAGTCATATCTTTAGGATGA+CGG | + | chr3.1:38219790-38219809 | None:intergenic | 30.0% |
| !!! | ATTTCCAATTAGTTTTGCTG+TGG | - | chr3.1:38218689-38218708 | MS.gene82712:intron | 30.0% |
| !!! | GCTTCTGATTTTTAAGTATG+TGG | + | chr3.1:38219768-38219787 | None:intergenic | 30.0% |
| !!! | TTTGTCATGTGTTTTTGGTT+TGG | - | chr3.1:38218007-38218026 | MS.gene82712:intron | 30.0% |
| AAAAGGAACAGTGGTAGTAT+CGG | + | chr3.1:38220682-38220701 | None:intergenic | 35.0% | |
| AAACAGAATTCGGGTCTAAA+GGG | + | chr3.1:38218611-38218630 | None:intergenic | 35.0% | |
| AAGTATGACAATGTAGCTGA+AGG | - | chr3.1:38218522-38218541 | MS.gene82712:intron | 35.0% | |
| AATAGTAACACAGCTCATCA+AGG | - | chr3.1:38220319-38220338 | MS.gene82712:intron | 35.0% | |
| AATGGAAAATTGGATCCTTG+TGG | - | chr3.1:38220543-38220562 | MS.gene82712:intron | 35.0% | |
| ATCCCAAAGTTGAGTAGAAA+CGG | + | chr3.1:38219433-38219452 | None:intergenic | 35.0% | |
| ATGATGAAGTGTGAAATCCT+TGG | - | chr3.1:38219703-38219722 | MS.gene82712:CDS | 35.0% | |
| ATGTTGTTAATTCCGGATAG+TGG | + | chr3.1:38219551-38219570 | None:intergenic | 35.0% | |
| ATTCCAGGTACACATTTCAT+TGG | - | chr3.1:38218416-38218435 | MS.gene82712:CDS | 35.0% | |
| CACACTTCATCATGTGTTAT+TGG | + | chr3.1:38219696-38219715 | None:intergenic | 35.0% | |
| CATAGGTTTCATCGAAAGTA+AGG | + | chr3.1:38219579-38219598 | None:intergenic | 35.0% | |
| CATTGAATTGGATCTTCATC+TGG | + | chr3.1:38218189-38218208 | None:intergenic | 35.0% | |
| CGGTAAAATCTGATGATATC+TGG | - | chr3.1:38220893-38220912 | MS.gene82712:CDS | 35.0% | |
| CTAACTGCTATTCCACTTTA+GGG | - | chr3.1:38219503-38219522 | MS.gene82712:intron | 35.0% | |
| CTCAGGAAAAATACACCATA+CGG | - | chr3.1:38218578-38218597 | MS.gene82712:intron | 35.0% | |
| GAAAAACCTTACATCTTCCA+TGG | - | chr3.1:38217833-38217852 | MS.gene82712:CDS | 35.0% | |
| GGAGCATATACCATTGTTAA+AGG | - | chr3.1:38218908-38218927 | MS.gene82712:intron | 35.0% | |
| GGTTAACATCATATCTGCAT+TGG | + | chr3.1:38218767-38218786 | None:intergenic | 35.0% | |
| TAAACAGAATTCGGGTCTAA+AGG | + | chr3.1:38218612-38218631 | None:intergenic | 35.0% | |
| TAAAGTGGAATAGCAGTTAG+CGG | + | chr3.1:38219503-38219522 | None:intergenic | 35.0% | |
| TACCGTTTCTACTCAACTTT+GGG | - | chr3.1:38219428-38219447 | MS.gene82712:intron | 35.0% | |
| TACGGTTACTAGCAAAAAGA+CGG | - | chr3.1:38219963-38219982 | MS.gene82712:CDS | 35.0% | |
| TATGATGTTAACCTGATTCC+TGG | - | chr3.1:38218774-38218793 | MS.gene82712:intron | 35.0% | |
| TCAAACACGGAACCTTTATA+AGG | - | chr3.1:38218341-38218360 | MS.gene82712:CDS | 35.0% | |
| TGAAATATGACAAGCAACCA+AGG | + | chr3.1:38220286-38220305 | None:intergenic | 35.0% | |
| TGTATAACTAAGCATAGTGG+AGG | + | chr3.1:38219869-38219888 | None:intergenic | 35.0% | |
| TTACCGTTTCTACTCAACTT+TGG | - | chr3.1:38219427-38219446 | MS.gene82712:intron | 35.0% | |
| TTGAACTTGAAGTTACTGAC+AGG | + | chr3.1:38217783-38217802 | None:intergenic | 35.0% | |
| TTGTCATATTTCATGTCCCA+TGG | - | chr3.1:38220293-38220312 | MS.gene82712:CDS | 35.0% | |
| ! | AGTTACATTTTCTACAGCTC+AGG | - | chr3.1:38218561-38218580 | MS.gene82712:intron | 35.0% |
| ! | GCTGTGTTACTATTATACCA+TGG | + | chr3.1:38220313-38220332 | None:intergenic | 35.0% |
| ! | GGAAGATGTAAGGTTTTTCT+AGG | + | chr3.1:38217832-38217851 | None:intergenic | 35.0% |
| ! | TAGTATCGGAGAAAACTCAA+AGG | + | chr3.1:38220668-38220687 | None:intergenic | 35.0% |
| ! | TGTAAGGTTTTTCTAGGCTT+AGG | + | chr3.1:38217826-38217845 | None:intergenic | 35.0% |
| !! | ATATAACAATCGGTGATGGA+GGG | - | chr3.1:38220574-38220593 | MS.gene82712:intron | 35.0% |
| !! | GCTAAGGTTGATTTGAGAAA+TGG | - | chr3.1:38218146-38218165 | MS.gene82712:CDS | 35.0% |
| !! | GTTTTCTAGTCTTCGCAATA+GGG | - | chr3.1:38219472-38219491 | MS.gene82712:intron | 35.0% |
| !! | TCTGTTTACTTTTACCGATG+CGG | - | chr3.1:38218624-38218643 | MS.gene82712:intron | 35.0% |
| !! | TGTTTTCTAGTCTTCGCAAT+AGG | - | chr3.1:38219471-38219490 | MS.gene82712:intron | 35.0% |
| !! | TTTTCTAGTCTTCGCAATAG+GGG | - | chr3.1:38219473-38219492 | MS.gene82712:intron | 35.0% |
| AAAATGCCGTATGAGGAAAG+TGG | - | chr3.1:38218960-38218979 | MS.gene82712:intron | 40.0% | |
| AAAGTGGAATAGCAGTTAGC+GGG | + | chr3.1:38219502-38219521 | None:intergenic | 40.0% | |
| AACACAAGGGAATCATGAAG+TGG | - | chr3.1:38218887-38218906 | MS.gene82712:intron | 40.0% | |
| AACCTGTTGAGGATAAGAAG+AGG | + | chr3.1:38217869-38217888 | None:intergenic | 40.0% | |
| AATGCATACATCTGTCACCA+AGG | + | chr3.1:38219723-38219742 | None:intergenic | 40.0% | |
| ACAAGCATATGAGAGTTACC+TGG | - | chr3.1:38218445-38218464 | MS.gene82712:CDS | 40.0% | |
| ACCTGTTGAGGATAAGAAGA+GGG | + | chr3.1:38217868-38217887 | None:intergenic | 40.0% | |
| ACGGTTACTAGCAAAAAGAC+GGG | - | chr3.1:38219964-38219983 | MS.gene82712:CDS | 40.0% | |
| AGAATCCCATGGAAGATGTA+AGG | + | chr3.1:38217842-38217861 | None:intergenic | 40.0% | |
| CAATGACCCAACCATACAAA+TGG | + | chr3.1:38220740-38220759 | None:intergenic | 40.0% | |
| CCAACGATGCTGAATATAGT+CGG | + | chr3.1:38218814-38218833 | None:intergenic | 40.0% | |
| CGACTATATTCAGCATCGTT+GGG | - | chr3.1:38218812-38218831 | MS.gene82712:intron | 40.0% | |
| CTAATTGGAAATTGAGCTGG+TGG | + | chr3.1:38218681-38218700 | None:intergenic | 40.0% | |
| GAAAATAATCCGGCCACAAT+TGG | - | chr3.1:38220149-38220168 | MS.gene82712:CDS | 40.0% | |
| GAATATAGTCGGCATACGAA+AGG | + | chr3.1:38218803-38218822 | None:intergenic | 40.0% | |
| GCACCTTCAGTTGTTGAATA+CGG | - | chr3.1:38218486-38218505 | MS.gene82712:intron | 40.0% | |
| GCTAACTGCTATTCCACTTT+AGG | - | chr3.1:38219502-38219521 | MS.gene82712:intron | 40.0% | |
| GTCCATATAACAATCGGTGA+TGG | - | chr3.1:38220570-38220589 | MS.gene82712:intron | 40.0% | |
| GTGTTCTGCGTTTGACATTA+CGG | - | chr3.1:38219945-38219964 | MS.gene82712:CDS | 40.0% | |
| GTTCCGTATTCAACAACTGA+AGG | + | chr3.1:38218492-38218511 | None:intergenic | 40.0% | |
| TAAACTCAACACATGCCTTC+TGG | - | chr3.1:38220842-38220861 | MS.gene82712:intron | 40.0% | |
| TAGATGGAAAATGCCGTATG+AGG | - | chr3.1:38218953-38218972 | MS.gene82712:intron | 40.0% | |
| TGAACAGACAGATCTGTCAA+AGG | - | chr3.1:38220243-38220262 | MS.gene82712:CDS | 40.0% | |
| TTGAATACGGAACATTGCCA+GGG | - | chr3.1:38218499-38218518 | MS.gene82712:intron | 40.0% | |
| ! | ACATGAAAAGCGTGTATTCC+AGG | - | chr3.1:38218401-38218420 | MS.gene82712:CDS | 40.0% |
| ! | CATATAACAATCGGTGATGG+AGG | - | chr3.1:38220573-38220592 | MS.gene82712:intron | 40.0% |
| ! | CTATTCCACTTTAGGGATTC+GGG | - | chr3.1:38219510-38219529 | MS.gene82712:intron | 40.0% |
| ! | CTCCATCACCGATTGTTATA+TGG | + | chr3.1:38220575-38220594 | None:intergenic | 40.0% |
| ! | GCTATTCCACTTTAGGGATT+CGG | - | chr3.1:38219509-38219528 | MS.gene82712:intron | 40.0% |
| ! | GGTGCTGTCCATATAACAAT+CGG | - | chr3.1:38220564-38220583 | MS.gene82712:intron | 40.0% |
| ! | TGAAGGTGCAGATTTGTCAT+CGG | + | chr3.1:38218475-38218494 | None:intergenic | 40.0% |
| ! | TGGTGATATGATGGAAACCA+TGG | - | chr3.1:38220348-38220367 | MS.gene82712:intron | 40.0% |
| ! | TTGGGTCATTGATGTTTTGC+AGG | - | chr3.1:38220749-38220768 | MS.gene82712:intron | 40.0% |
| !! | TGGTGTTTTGAGCTGTAACT+CGG | + | chr3.1:38218661-38218680 | None:intergenic | 40.0% |
| !! | TTGATTTGGTCCAACCAGTT+TGG | + | chr3.1:38218728-38218747 | None:intergenic | 40.0% |
| !!! | AGCGTCGATTTAGTTTTTGC+TGG | - | chr3.1:38220391-38220410 | MS.gene82712:intron | 40.0% |
| !!! | CCAATTAGTTTTGCTGTGGT+CGG | - | chr3.1:38218693-38218712 | MS.gene82712:intron | 40.0% |
| AACACAGCTCATCAAGGTGA+AGG | - | chr3.1:38220325-38220344 | MS.gene82712:intron | 45.0% | |
| ACAGACAGATCTGTCAAAGG+TGG | - | chr3.1:38220246-38220265 | MS.gene82712:CDS | 45.0% | |
| ACCCTCTTCTTATCCTCAAC+AGG | - | chr3.1:38217864-38217883 | MS.gene82712:CDS | 45.0% | |
| ACGCTAGCAGCATAAAGCAA+TGG | + | chr3.1:38220376-38220395 | None:intergenic | 45.0% | |
| AGACCATGGATGGTAACACA+AGG | - | chr3.1:38218873-38218892 | MS.gene82712:intron | 45.0% | |
| AGATTTGTCATCGGTGATCC+AGG | + | chr3.1:38218466-38218485 | None:intergenic | 45.0% | |
| AGCATAAAGCAATGGCTCCA+TGG | + | chr3.1:38220368-38220387 | None:intergenic | 45.0% | |
| AGGGGTTGTTTAACCTGTTG+AGG | + | chr3.1:38217880-38217899 | None:intergenic | 45.0% | |
| AGGTGAAGGTGGTGATATGA+TGG | - | chr3.1:38220339-38220358 | MS.gene82712:intron | 45.0% | |
| ATATAGATCCACAGCCGAAG+TGG | - | chr3.1:38220773-38220792 | MS.gene82712:intron | 45.0% | |
| ATCGTTGGGACACATTTGGT+AGG | - | chr3.1:38218826-38218845 | MS.gene82712:intron | 45.0% | |
| CAGGTACACATTTCATTGGC+AGG | - | chr3.1:38218420-38218439 | MS.gene82712:CDS | 45.0% | |
| CCGACCACAGCAAAACTAAT+TGG | + | chr3.1:38218696-38218715 | None:intergenic | 45.0% | |
| CCGACTATATTCAGCATCGT+TGG | - | chr3.1:38218811-38218830 | MS.gene82712:intron | 45.0% | |
| CGACACTTCAAAAGGAACAG+TGG | + | chr3.1:38220691-38220710 | None:intergenic | 45.0% | |
| CTAAAGGGCCTATTACCGTA+TGG | + | chr3.1:38218596-38218615 | None:intergenic | 45.0% | |
| CTCGATCCACTTTCCTCATA+CGG | + | chr3.1:38218969-38218988 | None:intergenic | 45.0% | |
| CTGCCAATGAAATGTGTACC+TGG | + | chr3.1:38218422-38218441 | None:intergenic | 45.0% | |
| GAATTCCGTGAAGCCAGTTT+CGG | - | chr3.1:38220799-38220818 | MS.gene82712:intron | 45.0% | |
| GACCATGGATGGTAACACAA+GGG | - | chr3.1:38218874-38218893 | MS.gene82712:intron | 45.0% | |
| GCTACATTGTCATACTTCCC+TGG | + | chr3.1:38218519-38218538 | None:intergenic | 45.0% | |
| GCTTCTCTCTTCCCTTGATA+AGG | - | chr3.1:38219648-38219667 | MS.gene82712:CDS | 45.0% | |
| GGTGCTCACATTATCATGCT+TGG | - | chr3.1:38219020-38219039 | MS.gene82712:intron | 45.0% | |
| GTTATATGGACAGCACCACA+AGG | + | chr3.1:38220561-38220580 | None:intergenic | 45.0% | |
| GTTGAATACGGAACATTGCC+AGG | - | chr3.1:38218498-38218517 | MS.gene82712:intron | 45.0% | |
| TCACGGAATTCTGACCACTT+CGG | + | chr3.1:38220790-38220809 | None:intergenic | 45.0% | |
| TCCAAGGCAACTACCAATTG+TGG | + | chr3.1:38220165-38220184 | None:intergenic | 45.0% | |
| TGTCAAAGGTGGACAGGAAA+AGG | - | chr3.1:38220257-38220276 | MS.gene82712:CDS | 45.0% | |
| TTCCCTTGTGTTACCATCCA+TGG | + | chr3.1:38218879-38218898 | None:intergenic | 45.0% | |
| ! | CACTTTAGGGATTCGGGATT+GGG | - | chr3.1:38219516-38219535 | MS.gene82712:intron | 45.0% |
| ! | CATGGTCTAGAACTAGCAAG+TGG | + | chr3.1:38218861-38218880 | None:intergenic | 45.0% |
| ! | GAAGAGGGTTTAGAATCCCA+TGG | + | chr3.1:38217853-38217872 | None:intergenic | 45.0% |
| !! | CACTTGCTAGTTCTAGACCA+TGG | - | chr3.1:38218859-38218878 | MS.gene82712:intron | 45.0% |
| !! | GGTGTTTTGAGCTGTAACTC+GGG | + | chr3.1:38218660-38218679 | None:intergenic | 45.0% |
| !! | GTTGGAGGCATCTAGAAAAC+AGG | + | chr3.1:38219319-38219338 | None:intergenic | 45.0% |
| !! | GTTTACTTTTACCGATGCGG+TGG | - | chr3.1:38218627-38218646 | MS.gene82712:intron | 45.0% |
| !! | TGCTAGTTCTAGACCATGGA+TGG | - | chr3.1:38218863-38218882 | MS.gene82712:intron | 45.0% |
| AATTCTGACCACTTCGGCTG+TGG | + | chr3.1:38220784-38220803 | None:intergenic | 50.0% | |
| ACAGCTCATCAAGGTGAAGG+TGG | - | chr3.1:38220328-38220347 | MS.gene82712:intron | 50.0% | |
| AGGCAACTACCAATTGTGGC+CGG | + | chr3.1:38220161-38220180 | None:intergenic | 50.0% | |
| ATACCGAGCGTTCATATGCG+TGG | + | chr3.1:38220423-38220442 | None:intergenic | 50.0% | |
| CAGATCTGTCAAAGGTGGAC+AGG | - | chr3.1:38220251-38220270 | MS.gene82712:CDS | 50.0% | |
| CAGCATCGTTGGGACACATT+TGG | - | chr3.1:38218822-38218841 | MS.gene82712:intron | 50.0% | |
| CCAATCCCGAATCCCTAAAG+TGG | + | chr3.1:38219518-38219537 | None:intergenic | 50.0% | |
| GAACGCTCGGTATGCTTATG+TGG | - | chr3.1:38220430-38220449 | MS.gene82712:intron | 50.0% | |
| GAGATCTTGGCCAAACTGGT+TGG | - | chr3.1:38218715-38218734 | MS.gene82712:intron | 50.0% | |
| TAGCTCACCATGACCGAAAC+TGG | + | chr3.1:38220815-38220834 | None:intergenic | 50.0% | |
| TGGACAGGAAAAGGACACCT+TGG | - | chr3.1:38220266-38220285 | MS.gene82712:CDS | 50.0% | |
| TGTCCACGCATATGAACGCT+CGG | - | chr3.1:38220417-38220436 | MS.gene82712:intron | 50.0% | |
| ! | CATGACCGAAACTGGCTTCA+CGG | + | chr3.1:38220807-38220826 | None:intergenic | 50.0% |
| ! | CCACTTTAGGGATTCGGGAT+TGG | - | chr3.1:38219515-38219534 | MS.gene82712:intron | 50.0% |
| ! | GCCACAATTGGTAGTTGCCT+TGG | - | chr3.1:38220161-38220180 | MS.gene82712:CDS | 50.0% |
| ! | TTTGCTGTGGTCGGAGATCT+TGG | - | chr3.1:38218702-38218721 | MS.gene82712:intron | 50.0% |
| ! | TTTTACCGATGCGGTGGACA+AGG | - | chr3.1:38218633-38218652 | MS.gene82712:intron | 50.0% |
| !! | CAACACATGCCTTCTGGAGT+TGG | - | chr3.1:38220848-38220867 | MS.gene82712:intron | 50.0% |
| !! | GGTGATGGAGGGAACAAAGA+AGG | - | chr3.1:38220585-38220604 | MS.gene82712:intron | 50.0% |
| ACGAAAGGTCGCCAGGAATC+AGG | + | chr3.1:38218788-38218807 | None:intergenic | 55.0% | |
| CGTGAAGCCAGTTTCGGTCA+TGG | - | chr3.1:38220805-38220824 | MS.gene82712:intron | 55.0% | |
| GTCGGAGATCTTGGCCAAAC+TGG | - | chr3.1:38218711-38218730 | MS.gene82712:intron | 55.0% | |
| ! | ATTCCGGTGCCAACTCCAGA+AGG | + | chr3.1:38220860-38220879 | None:intergenic | 55.0% |
| !! | ATGCCTTCTGGAGTTGGCAC+CGG | - | chr3.1:38220854-38220873 | MS.gene82712:CDS | 55.0% |
| GGGCACTTTGCGCCACTATC+CGG | - | chr3.1:38219536-38219555 | MS.gene82712:intron | 60.0% | |
| TCGGCATACGAAAGGTCGCC+AGG | + | chr3.1:38218795-38218814 | None:intergenic | 60.0% | |
| ! | CCGGAATGATGACGACGAGC+CGG | - | chr3.1:38220873-38220892 | MS.gene82712:CDS | 60.0% |
| ! | CCGGCTCGTCGTCATCATTC+CGG | + | chr3.1:38220876-38220895 | None:intergenic | 60.0% |
| CGGGACCTTGTCCACCGCAT+CGG | + | chr3.1:38218641-38218660 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 38217745 | 38220990 | 38217745 | ID=MS.gene82712 |
| chr3.1 | mRNA | 38217745 | 38220990 | 38217745 | ID=MS.gene82712.t1;Parent=MS.gene82712 |
| chr3.1 | exon | 38220850 | 38220990 | 38220850 | ID=MS.gene82712.t1.exon1;Parent=MS.gene82712.t1 |
| chr3.1 | CDS | 38220850 | 38220990 | 38220850 | ID=cds.MS.gene82712.t1;Parent=MS.gene82712.t1 |
| chr3.1 | exon | 38219644 | 38220312 | 38219644 | ID=MS.gene82712.t1.exon2;Parent=MS.gene82712.t1 |
| chr3.1 | CDS | 38219644 | 38220312 | 38219644 | ID=cds.MS.gene82712.t1;Parent=MS.gene82712.t1 |
| chr3.1 | exon | 38218297 | 38218485 | 38218297 | ID=MS.gene82712.t1.exon3;Parent=MS.gene82712.t1 |
| chr3.1 | CDS | 38218297 | 38218485 | 38218297 | ID=cds.MS.gene82712.t1;Parent=MS.gene82712.t1 |
| chr3.1 | exon | 38218116 | 38218204 | 38218116 | ID=MS.gene82712.t1.exon4;Parent=MS.gene82712.t1 |
| chr3.1 | CDS | 38218116 | 38218204 | 38218116 | ID=cds.MS.gene82712.t1;Parent=MS.gene82712.t1 |
| chr3.1 | exon | 38217745 | 38217964 | 38217745 | ID=MS.gene82712.t1.exon5;Parent=MS.gene82712.t1 |
| chr3.1 | CDS | 38217745 | 38217964 | 38217745 | ID=cds.MS.gene82712.t1;Parent=MS.gene82712.t1 |
| Gene Sequence |
| Protein sequence |
