Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82830.t1 | XP_013450762.1 | 95.4 | 1997 | 47 | 4 | 1 | 1994 | 1 | 1956 | 0.00E+00 | 3762.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82830.t1 | F4KHD8 | 54.5 | 1975 | 805 | 21 | 34 | 1993 | 26 | 1922 | 0.0e+00 | 2058.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82830.t1 | A0A072UG84 | 95.4 | 1997 | 47 | 4 | 1 | 1994 | 1 | 1956 | 0.0e+00 | 3762.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052076 | MS.gene82830 | 0.805717 | 1.17E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene023858 | MS.gene82830 | PPI |
| MS.gene82830 | MS.gene52227 | PPI |
| MS.gene82830 | MS.gene27712 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82830.t1 | MTR_6g004840 | 95.443 | 1997 | 47 | 4 | 1 | 1994 | 1 | 1956 | 0.0 | 3901 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82830.t1 | AT5G40480 | 54.655 | 1987 | 802 | 24 | 25 | 1993 | 17 | 1922 | 0.0 | 2115 |
Find 443 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTGATCTTCCCTTGGCTTT+GGG | 0.137401 | 6.1:-944308 | MS.gene82830:CDS |
| GGATTGAATGATAAAGTTTC+TGG | 0.155807 | 6.1:-940307 | MS.gene82830:CDS |
| TATTTCCACGGATGACTTTA+AGG | 0.158110 | 6.1:+959089 | None:intergenic |
| TCTGCTAACTATTGACTTAT+TGG | 0.170407 | 6.1:-948110 | MS.gene82830:CDS |
| GCTTGTTAATGTTCCTATTA+AGG | 0.174316 | 6.1:-959468 | MS.gene82830:CDS |
| CGCCCATTTGCCACGGTAAT+AGG | 0.191396 | 6.1:+951874 | None:intergenic |
| CAAAGAACATGAACATGTTT+TGG | 0.205360 | 6.1:-939554 | MS.gene82830:CDS |
| GTCAGTGCCATGCAACATTT+TGG | 0.215790 | 6.1:-947568 | MS.gene82830:CDS |
| TCCTGATCTTCCCTTGGCTT+TGG | 0.216730 | 6.1:-944309 | MS.gene82830:CDS |
| TAATACAAAGTCAAGCTATT+AGG | 0.229861 | 6.1:-947540 | MS.gene82830:CDS |
| AAGACTTGTAGTTGTATAAT+AGG | 0.231194 | 6.1:+944259 | None:intergenic |
| CAGGTAAATTTGTCAATTAC+TGG | 0.235106 | 6.1:-950247 | MS.gene82830:CDS |
| GTGATATTCTTTAGAAAGTA+TGG | 0.235634 | 6.1:+953260 | None:intergenic |
| CCTATTAACTTGAGCATAAA+AGG | 0.240146 | 6.1:-941129 | MS.gene82830:intron |
| ATGTTGGCTTCCCTTGTTCT+TGG | 0.240502 | 6.1:-953326 | MS.gene82830:CDS |
| CCCACCAGTAAAGGTGATTT+TGG | 0.245791 | 6.1:-938550 | MS.gene82830:CDS |
| TTAGCTATCCCTAATCCTTT+AGG | 0.245991 | 6.1:+950127 | None:intergenic |
| TACAGATGCCATTCGTTTAC+AGG | 0.251264 | 6.1:-951083 | MS.gene82830:intron |
| CGGCTCTTGGCAAATTCTAT+TGG | 0.253158 | 6.1:-946762 | MS.gene82830:CDS |
| GCAAGTATTGATAGATATTC+TGG | 0.254551 | 6.1:-946786 | MS.gene82830:CDS |
| GCTACTGTTGCTGGCTTTCT+TGG | 0.260421 | 6.1:-951157 | MS.gene82830:CDS |
| TTTGAGCAGGACCTCCTTAC+TGG | 0.276469 | 6.1:+942637 | None:intergenic |
| TAATAGAATTATGAAATATC+TGG | 0.287521 | 6.1:+960042 | None:intergenic |
| TCACCACCGCATGCTTCTTC+TGG | 0.288618 | 6.1:-961810 | MS.gene82830:CDS |
| GGAGGGAGAATCCAGGTTAT+TGG | 0.289390 | 6.1:+944281 | None:intergenic |
| TCAATATCTTATCCAAATAA+AGG | 0.291406 | 6.1:-957785 | MS.gene82830:CDS |
| AGTCTCCATTCCATCTTCTA+TGG | 0.293136 | 6.1:-953662 | MS.gene82830:CDS |
| TAGCTATCCCTAATCCTTTA+GGG | 0.293302 | 6.1:+950128 | None:intergenic |
| CGTCAAGCCATGGCTGGATT+TGG | 0.299244 | 6.1:-939692 | MS.gene82830:CDS |
| TTCTTTGAGAGAAGCATATA+TGG | 0.299302 | 6.1:+939570 | None:intergenic |
| ATTATGAAATATCTGGATTC+TGG | 0.301307 | 6.1:+960049 | None:intergenic |
| TGCTGGCTTTCTTGGTGGCT+TGG | 0.302652 | 6.1:-951149 | MS.gene82830:CDS |
| ATGATTACCGGTCGGATTAC+TGG | 0.304714 | 6.1:-955288 | MS.gene82830:CDS |
| AAACTCATCTTCTCTGAGTT+TGG | 0.305100 | 6.1:-951800 | MS.gene82830:CDS |
| ACTGTATCTGTGTCAGCTTC+TGG | 0.305611 | 6.1:-954636 | MS.gene82830:CDS |
| ATTGTTCGTGCTACTGTTGC+TGG | 0.308448 | 6.1:-951166 | MS.gene82830:CDS |
| AAAATAAAGGGGAGATATCT+TGG | 0.310087 | 6.1:-947709 | MS.gene82830:CDS |
| TCAGGAAACAACGGATAAAT+TGG | 0.311518 | 6.1:+946161 | None:intergenic |
| TCTACCAGTGGCACGATCTT+TGG | 0.311898 | 6.1:+944067 | None:intergenic |
| TATTGAAACTGTGGATGTTT+TGG | 0.312949 | 6.1:-953007 | MS.gene82830:CDS |
| GTTCTTGTGCATCGGATATC+TGG | 0.319667 | 6.1:-952955 | MS.gene82830:CDS |
| GCTGGCTTTCTTGGTGGCTT+GGG | 0.323174 | 6.1:-951148 | MS.gene82830:CDS |
| GACGCCAAAATCACCTTTAC+TGG | 0.326530 | 6.1:+938546 | None:intergenic |
| GATACCTAGAATATCATAAA+AGG | 0.326881 | 6.1:+942571 | None:intergenic |
| ACAAGTGTTACCTTTGCATT+AGG | 0.329058 | 6.1:+950804 | None:intergenic |
| ATGTTAAGGTTTATGATTAC+CGG | 0.329634 | 6.1:-955300 | MS.gene82830:CDS |
| GGCATCACATCTGTAGAAAA+AGG | 0.330106 | 6.1:+953461 | None:intergenic |
| TGAGCCACAGTTACAAAATA+TGG | 0.335270 | 6.1:-959203 | MS.gene82830:CDS |
| TCCTTACTCACCGGAGCATT+TGG | 0.336829 | 6.1:-939641 | MS.gene82830:CDS |
| TTGTTTATGGCGAGAACATC+AGG | 0.336924 | 6.1:+942411 | None:intergenic |
| ACGTTAGTTAACATCCCTTT+TGG | 0.338023 | 6.1:+940021 | None:intergenic |
| CCACTTTATCAAAGAATTGA+AGG | 0.339313 | 6.1:+953440 | None:intergenic |
| ACAACTTCTCTGTGAAGTTC+AGG | 0.340954 | 6.1:-939978 | MS.gene82830:intron |
| ACATCTTTGCTCCATGGTTC+AGG | 0.342055 | 6.1:+953036 | None:intergenic |
| ATAACACCTTTGTCTAGTTC+TGG | 0.342493 | 6.1:-957871 | MS.gene82830:CDS |
| TACTTATATGCTTCTAATAC+TGG | 0.354539 | 6.1:-953300 | MS.gene82830:CDS |
| CCTTCAATTCTTTGATAAAG+TGG | 0.355249 | 6.1:-953440 | MS.gene82830:CDS |
| GCAGCTGGTATTAGTGCTTC+TGG | 0.358788 | 6.1:-951835 | MS.gene82830:CDS |
| ATCTCTCGGCTTTCAGCAGC+TGG | 0.361706 | 6.1:+938380 | None:intergenic |
| CCTGTTCAATATCGACTTCA+AGG | 0.362382 | 6.1:-961738 | MS.gene82830:CDS |
| TTGGTCTTGCGAAATGAATC+AGG | 0.366471 | 6.1:-951694 | MS.gene82830:CDS |
| CTGGGCTCCCGGTGTTCATC+AGG | 0.369373 | 6.1:-954824 | MS.gene82830:CDS |
| CCATGGCTGGATTTGGAAAC+TGG | 0.370320 | 6.1:-939685 | MS.gene82830:CDS |
| GGCTCTTGGCAAATTCTATT+GGG | 0.370964 | 6.1:-946761 | MS.gene82830:CDS |
| TGATAATAAACTTACATAAA+GGG | 0.372501 | 6.1:+947678 | None:intergenic |
| TGATGTCTATTTCCATTCTC+TGG | 0.372703 | 6.1:+938213 | None:intergenic |
| CTGTGAGGAACTAGCATATT+GGG | 0.373746 | 6.1:-951761 | MS.gene82830:CDS |
| CACAGAGAAGTTGTATCCTT+TGG | 0.374052 | 6.1:+939987 | None:intergenic |
| GCCCATTTGCCACGGTAATA+GGG | 0.377113 | 6.1:+951875 | None:intergenic |
| ACATACCAACGTGCCATTAG+AGG | 0.381220 | 6.1:+957820 | None:intergenic |
| GCTACCTGGTGCGTCATATA+TGG | 0.381886 | 6.1:-947470 | MS.gene82830:intron |
| GACAGTCTGTCTAGTCTTGA+TGG | 0.382664 | 6.1:-947757 | MS.gene82830:CDS |
| GTTGAAGATACAAGGGTTGC+TGG | 0.385128 | 6.1:-957949 | MS.gene82830:CDS |
| TCTTTAGGTGCTGACTTTCA+AGG | 0.387010 | 6.1:-945136 | MS.gene82830:intron |
| AATACAAAGTCAAGCTATTA+GGG | 0.390004 | 6.1:-947539 | MS.gene82830:CDS |
| GGCTTTATAAACGTCTTGTA+TGG | 0.390471 | 6.1:-945030 | MS.gene82830:CDS |
| GAGGGAGAATCCAGGTTATT+GGG | 0.391327 | 6.1:+944282 | None:intergenic |
| TTGAATACGTAACCATTAGT+TGG | 0.393816 | 6.1:+938331 | None:intergenic |
| TAGGGTAGTCCATTCGCTTC+GGG | 0.400265 | 6.1:+959494 | None:intergenic |
| CTGAGGGGAGAATCCTTAAT+AGG | 0.401402 | 6.1:+959455 | None:intergenic |
| CTTGTTTGCTGCGATCTATA+TGG | 0.402948 | 6.1:+938059 | None:intergenic |
| ATATCAGTAGATCCGTTAAC+TGG | 0.405839 | 6.1:-940256 | MS.gene82830:CDS |
| GACTTATTGGCCGGTACAAA+TGG | 0.406254 | 6.1:-948097 | MS.gene82830:CDS |
| AGAATCAATTGAAATAGAAA+TGG | 0.406470 | 6.1:+961680 | None:intergenic |
| GTAGTAAAGGGAATTGAGAT+TGG | 0.406719 | 6.1:-959253 | MS.gene82830:CDS |
| CTGCTTCTGTATGAAGTTGC+AGG | 0.407521 | 6.1:+938008 | None:intergenic |
| GCTTCAGAAGAGAGTCAAAT+TGG | 0.407991 | 6.1:-945078 | MS.gene82830:CDS |
| CTTTGGGGTTCCCAATAACC+TGG | 0.408442 | 6.1:-944292 | MS.gene82830:CDS |
| ACGAGCTATGTAAAAGTTAC+CGG | 0.409384 | 6.1:-946033 | MS.gene82830:CDS |
| GGACTTCCAATGTGAAGAAC+TGG | 0.409463 | 6.1:+941150 | None:intergenic |
| AGAGTAGATCCGCTATATAT+CGG | 0.411462 | 6.1:-939804 | MS.gene82830:CDS |
| CTGATCTTCCCTTGGCTTTG+GGG | 0.414263 | 6.1:-944307 | MS.gene82830:CDS |
| ACTGGAGTGGCCAAAGCTAT+TGG | 0.414705 | 6.1:-940238 | MS.gene82830:CDS |
| CTGATGAACACCGGGAGCCC+AGG | 0.417974 | 6.1:+954825 | None:intergenic |
| CCCAAAGCCAAGGGAAGATC+AGG | 0.418163 | 6.1:+944308 | None:intergenic |
| AGAATATCATAAAAGGTTGT+TGG | 0.420530 | 6.1:+942578 | None:intergenic |
| TTGTATCCTTTGGCAGGGTA+TGG | 0.421816 | 6.1:+939997 | None:intergenic |
| AAAGATGCCGTGTTCATTGA+TGG | 0.423956 | 6.1:-944137 | MS.gene82830:CDS |
| GTTAGTGTATGCATCGAACT+TGG | 0.424355 | 6.1:-957989 | MS.gene82830:CDS |
| ATCTTCTCTGAGTTTGGAAT+GGG | 0.425251 | 6.1:-951794 | MS.gene82830:CDS |
| TGAACCTTCTCCAATAGCTT+TGG | 0.426060 | 6.1:+940228 | None:intergenic |
| AACAAAACTGCTGATGGAAA+AGG | 0.426345 | 6.1:-942393 | MS.gene82830:CDS |
| CCTTGAAGTCGATATTGAAC+AGG | 0.426966 | 6.1:+961738 | None:intergenic |
| AAAGCTTACTCTCCAGGACT+TGG | 0.427378 | 6.1:-955202 | MS.gene82830:CDS |
| AATTTAGACTTGTCACTTGT+CGG | 0.429150 | 6.1:-953063 | MS.gene82830:CDS |
| GTCCATTCGCTTCGGGCATA+AGG | 0.429803 | 6.1:+959501 | None:intergenic |
| CTATCATTGTTGAAGATACA+AGG | 0.430709 | 6.1:-957957 | MS.gene82830:CDS |
| TGGTCTAATGCCTTCCGACT+TGG | 0.431583 | 6.1:+939606 | None:intergenic |
| ACCCCTATTACCGTGGCAAA+TGG | 0.431752 | 6.1:-951877 | MS.gene82830:CDS |
| ATTTCCACGGATGACTTTAA+GGG | 0.431756 | 6.1:+959090 | None:intergenic |
| ATCAAATGCTTCGGTTGCTC+AGG | 0.432949 | 6.1:-958028 | MS.gene82830:CDS |
| CTGACCATCATATTGTGTAT+AGG | 0.432971 | 6.1:+944217 | None:intergenic |
| ACAGCTTCTCTGAGCTATCC+TGG | 0.433676 | 6.1:-955172 | MS.gene82830:CDS |
| ACCACTTTGGTGGTTACCAC+TGG | 0.434411 | 6.1:-953149 | MS.gene82830:CDS |
| AGACTTGTAGTTGTATAATA+GGG | 0.436911 | 6.1:+944260 | None:intergenic |
| GCTTTGGCCACTCCAGTTAA+CGG | 0.437296 | 6.1:+940244 | None:intergenic |
| ATCTCAGGAGTCGTCATACT+TGG | 0.437399 | 6.1:-953382 | MS.gene82830:CDS |
| CTTCTTACATAGTCTACAAA+TGG | 0.437878 | 6.1:+937945 | None:intergenic |
| TGTAATTGTCGATGTATCTC+AGG | 0.439939 | 6.1:-953397 | MS.gene82830:CDS |
| GAATGGATTCAGATCATGTC+AGG | 0.440096 | 6.1:-949547 | MS.gene82830:CDS |
| ATATTACGAAGTCCAATGAT+TGG | 0.440839 | 6.1:-951726 | MS.gene82830:CDS |
| TTTCCTGTAGAAACTGTTGT+TGG | 0.441615 | 6.1:-953625 | MS.gene82830:CDS |
| TGAATACGTAACCATTAGTT+GGG | 0.441728 | 6.1:+938332 | None:intergenic |
| GCATTGCATGCTTCATAGAA+AGG | 0.441795 | 6.1:+942462 | None:intergenic |
| TAGATATTCTGGACGGCTCT+TGG | 0.442976 | 6.1:-946775 | MS.gene82830:CDS |
| GCTCAGGTTGACTCGATGAC+AGG | 0.443439 | 6.1:-958012 | MS.gene82830:CDS |
| GACATTTCATTTGAACCAGT+TGG | 0.443445 | 6.1:+937984 | None:intergenic |
| GTCAGCTTCTGGTACTATCC+AGG | 0.443607 | 6.1:-954625 | MS.gene82830:CDS |
| GCACGTTGGTATGTTGTATC+TGG | 0.444322 | 6.1:-957811 | MS.gene82830:CDS |
| CAGGTAGCAGGAAAATTTCA+TGG | 0.445318 | 6.1:+947485 | None:intergenic |
| GGTGTCAGATTCAGCTGCAT+TGG | 0.446758 | 6.1:+939204 | None:intergenic |
| GTCTCCTTCCGACCACTGTA+AGG | 0.446844 | 6.1:+960140 | None:intergenic |
| GAAATTATCTTGTTTCCTCC+TGG | 0.449983 | 6.1:+939837 | None:intergenic |
| ACTAAACGAGGAATACTTGA+TGG | 0.450898 | 6.1:+944181 | None:intergenic |
| AGTGGTTCCTGATCTTCCCT+TGG | 0.451652 | 6.1:-944315 | MS.gene82830:CDS |
| ACGGATAAATTGGCAGTTTG+CGG | 0.451783 | 6.1:+946171 | None:intergenic |
| TTCAGACGTGGAAATTCAGT+TGG | 0.452006 | 6.1:-952141 | MS.gene82830:CDS |
| ACCAAATGCTCCGGTGAGTA+AGG | 0.453149 | 6.1:+939640 | None:intergenic |
| ATAGGGTAGTCCATTCGCTT+CGG | 0.455326 | 6.1:+959493 | None:intergenic |
| CATCTTCTCTGAGTTTGGAA+TGG | 0.456275 | 6.1:-951795 | MS.gene82830:CDS |
| GTTGCAGAATGATGATGTTA+AGG | 0.456506 | 6.1:-955314 | MS.gene82830:intron |
| CTCCCTTCCCTCTTGTAGTA+CGG | 0.456950 | 6.1:+937906 | None:intergenic |
| TAGCTGGCTTACAGTTTATG+TGG | 0.458179 | 6.1:-959526 | MS.gene82830:CDS |
| TGCCTTCTGTAGCTGAAGCT+TGG | 0.459647 | 6.1:-952104 | MS.gene82830:CDS |
| ACCATCATACTCCCAACTAA+TGG | 0.460634 | 6.1:-938343 | MS.gene82830:intron |
| ACTTGAATCTAGTCCTCTAA+TGG | 0.460664 | 6.1:-957833 | MS.gene82830:CDS |
| TCGAAATTCACTGGAATCGC+CGG | 0.460718 | 6.1:-938591 | MS.gene82830:CDS |
| GAGAAGTTGTATCCTTTGGC+AGG | 0.462348 | 6.1:+939991 | None:intergenic |
| ATATGCAATTTGATAGTAGA+TGG | 0.463875 | 6.1:+946218 | None:intergenic |
| GATGGATGGAGCTGATTACT+TGG | 0.465787 | 6.1:+953351 | None:intergenic |
| CTATTAAGCTTGATTTAGAC+GGG | 0.465977 | 6.1:-960025 | MS.gene82830:CDS |
| AAATATATCAAGCTGAACTC+TGG | 0.466292 | 6.1:+950831 | None:intergenic |
| GTGGAATAATTGTACTGCCC+TGG | 0.466662 | 6.1:-954843 | MS.gene82830:CDS |
| TGTTTCCTCCTGGTGCATCA+AGG | 0.469849 | 6.1:+939847 | None:intergenic |
| GCTGTCAAATTTCCAAGTCC+TGG | 0.471447 | 6.1:+955190 | None:intergenic |
| AAAAGCATCTTTACATGTTG+CGG | 0.473242 | 6.1:-953211 | MS.gene82830:CDS |
| TGGTTACCACTGGCTTGACT+TGG | 0.474767 | 6.1:-953139 | MS.gene82830:CDS |
| ACTCAATGTTGAAGGCAATT+CGG | 0.475002 | 6.1:-941682 | MS.gene82830:intron |
| TCTATTAAGCTTGATTTAGA+CGG | 0.476000 | 6.1:-960026 | MS.gene82830:CDS |
| AGGTAAATTTGTCAATTACT+GGG | 0.477761 | 6.1:-950246 | MS.gene82830:CDS |
| CATGAGTTAAATCTTGTCCC+TGG | 0.477995 | 6.1:-953090 | MS.gene82830:CDS |
| ATTGTACTGCCCTGGGCTCC+CGG | 0.480249 | 6.1:-954835 | MS.gene82830:CDS |
| GGCTTTGTTCATGGTTACAC+TGG | 0.480952 | 6.1:+938157 | None:intergenic |
| TTTCTCAGATGCAGGTTCAT+GGG | 0.481371 | 6.1:+938190 | None:intergenic |
| ACTGTTGCTGGCTTTCTTGG+TGG | 0.482854 | 6.1:-951154 | MS.gene82830:CDS |
| GGTCTAATGCCTTCCGACTT+GGG | 0.483298 | 6.1:+939607 | None:intergenic |
| TCAAATTAGAATAGCCAGTA+AGG | 0.484432 | 6.1:-942651 | MS.gene82830:CDS |
| CCCACCCTTCATTGTACGTC+AGG | 0.485080 | 6.1:-953184 | MS.gene82830:CDS |
| GTGACATATTGTTAGGTCAT+GGG | 0.486481 | 6.1:-960246 | MS.gene82830:intron |
| CTAACTATTGACTTATTGGC+CGG | 0.486547 | 6.1:-948106 | MS.gene82830:CDS |
| TCAGACGTGGAAATTCAGTT+GGG | 0.487029 | 6.1:-952140 | MS.gene82830:CDS |
| GTGGACTATTGAAGATGAAA+AGG | 0.488326 | 6.1:-946011 | MS.gene82830:intron |
| ATAACCATCGTGGGAAATAC+CGG | 0.490618 | 6.1:-939162 | MS.gene82830:intron |
| GATGCAATGGTTGCAGTGAC+TGG | 0.491484 | 6.1:+938032 | None:intergenic |
| TCTTTGATAAAGTGGAAAGC+TGG | 0.492983 | 6.1:-953432 | MS.gene82830:CDS |
| TATTACGAAGTCCAATGATT+GGG | 0.493352 | 6.1:-951725 | MS.gene82830:CDS |
| GAAGTTACTCAACCACCAAC+AGG | 0.493804 | 6.1:-950178 | MS.gene82830:CDS |
| AATTGCAACAGCAGCACCTA+TGG | 0.494260 | 6.1:-939876 | MS.gene82830:intron |
| TCATACAGAAGCAGTCCAAC+TGG | 0.494592 | 6.1:-937999 | MS.gene82830:CDS |
| CTTCTCTGAGCTATCCTGGT+GGG | 0.494741 | 6.1:-955168 | MS.gene82830:CDS |
| GAAGTGACGGTTGCTTCAAA+TGG | 0.495154 | 6.1:-961716 | MS.gene82830:CDS |
| CATAACCATAGAAGATGGAA+TGG | 0.495259 | 6.1:+953657 | None:intergenic |
| GCTGTGAGGAACTAGCATAT+TGG | 0.495932 | 6.1:-951762 | MS.gene82830:CDS |
| ATCGGATATCTGGCAACAAT+AGG | 0.497240 | 6.1:-952945 | MS.gene82830:CDS |
| AAGGTACGTCAAGCCATGGC+TGG | 0.497434 | 6.1:-939698 | MS.gene82830:CDS |
| ACAAAACTGCTGATGGAAAA+GGG | 0.497827 | 6.1:-942392 | MS.gene82830:CDS |
| CGGATGACTTTAAGGGTGTA+GGG | 0.498290 | 6.1:+959097 | None:intergenic |
| ATTTCTGTGGATGCTCCAAA+AGG | 0.498939 | 6.1:-940036 | MS.gene82830:CDS |
| TTTGCTTAGCTTACTGTGGA+AGG | 0.499379 | 6.1:-946861 | MS.gene82830:intron |
| AGGCAGAGAGTGACTACAAA+TGG | 0.499390 | 6.1:-954677 | MS.gene82830:CDS |
| AAACTGTAAGCCAGCTAATG+AGG | 0.499467 | 6.1:+959532 | None:intergenic |
| GCCATAAACAAAACTGCTGA+TGG | 0.502328 | 6.1:-942399 | MS.gene82830:CDS |
| TCCAGGTTGCAGATATAGAA+TGG | 0.502469 | 6.1:-949564 | MS.gene82830:CDS |
| CAAGGGAAGCCAACATCTGA+TGG | 0.504306 | 6.1:+953333 | None:intergenic |
| ATGAAACTCCGTACTACAAG+AGG | 0.505610 | 6.1:-937914 | MS.gene82830:CDS |
| CGAAGTCCAATGATTGGGAG+AGG | 0.505825 | 6.1:-951720 | MS.gene82830:CDS |
| AGCTGCTGTGACAATGAAAA+CGG | 0.506716 | 6.1:-953590 | MS.gene82830:CDS |
| ACACCCAAAGATGCTTGCCC+AGG | 0.507324 | 6.1:+938133 | None:intergenic |
| AGGGGAAGAGATTAGCCTAA+TGG | 0.507680 | 6.1:-949527 | MS.gene82830:intron |
| GTGGTCTGCATCAAATGCTT+CGG | 0.508320 | 6.1:-958037 | MS.gene82830:CDS |
| GAGTAGATCCGCTATATATC+GGG | 0.509100 | 6.1:-939803 | MS.gene82830:intron |
| CTGGATTTCGAGGATATACA+TGG | 0.510863 | 6.1:+941169 | None:intergenic |
| AAAGTGATTGACCTTGCTGT+TGG | 0.511353 | 6.1:-942617 | MS.gene82830:CDS |
| TTATTTGGATAAGATATTGA+CGG | 0.511833 | 6.1:+957788 | None:intergenic |
| TGACATTCTAATCCTGTTGG+TGG | 0.513014 | 6.1:+950166 | None:intergenic |
| GACTTTAAGGGTGTAGGGAA+CGG | 0.513658 | 6.1:+959102 | None:intergenic |
| CTCATGCCGAGCGTAGTTCA+CGG | 0.514826 | 6.1:-951912 | MS.gene82830:CDS |
| TCACAGATGTCGAAATTCAC+TGG | 0.516518 | 6.1:-938600 | MS.gene82830:intron |
| TATATGACGCACCAGGTAGC+AGG | 0.518102 | 6.1:+947473 | None:intergenic |
| TGAAGCATAACCATAGAAGA+TGG | 0.518828 | 6.1:+953652 | None:intergenic |
| TTCTATAATGGAAATGGGCA+AGG | 0.518876 | 6.1:-939500 | MS.gene82830:intron |
| CCCTTCATTGTACGTCAGGC+AGG | 0.519165 | 6.1:-953180 | MS.gene82830:CDS |
| TGGAATAATTGTACTGCCCT+GGG | 0.519571 | 6.1:-954842 | MS.gene82830:CDS |
| ATGATCGCTCCCACCAGTAA+AGG | 0.523193 | 6.1:-938559 | MS.gene82830:CDS |
| GCTATAAGTACAATGGAAGA+AGG | 0.524172 | 6.1:+952060 | None:intergenic |
| TTAGTGTATGCATCGAACTT+GGG | 0.524708 | 6.1:-957988 | MS.gene82830:CDS |
| CCCCTATTACCGTGGCAAAT+GGG | 0.526814 | 6.1:-951876 | MS.gene82830:CDS |
| CCTCATAACGCGCAAAACCT+CGG | 0.527308 | 6.1:+938524 | None:intergenic |
| CCAGTTTCCAAATCCAGCCA+TGG | 0.527442 | 6.1:+939685 | None:intergenic |
| GATTCTCCCCTCAGTGACTG+TGG | 0.527921 | 6.1:-959446 | MS.gene82830:CDS |
| TGATGAACACCGGGAGCCCA+GGG | 0.529518 | 6.1:+954826 | None:intergenic |
| ACTACAAGAGGGAAGGGAGA+AGG | 0.532068 | 6.1:-937902 | MS.gene82830:CDS |
| ACCTGCCTGACGTACAATGA+AGG | 0.532657 | 6.1:+953179 | None:intergenic |
| TGGAATTGTGATTCGTTGCA+AGG | 0.532675 | 6.1:-960090 | MS.gene82830:CDS |
| CTTGTAGTTGTATAATAGGG+AGG | 0.532724 | 6.1:+944263 | None:intergenic |
| TTCACCTTGGGCAATGAAAG+TGG | 0.532916 | 6.1:-954862 | MS.gene82830:CDS |
| TTATAAACGTCTTGTATGGA+AGG | 0.533268 | 6.1:-945026 | MS.gene82830:intron |
| CAACTGGACCATGACTGAAT+TGG | 0.533913 | 6.1:+953238 | None:intergenic |
| GTGGAAGGTGGCCCATCTCT+CGG | 0.534003 | 6.1:-946846 | MS.gene82830:CDS |
| CCCAAAGATGCTTGCCCAGG+GGG | 0.534843 | 6.1:+938136 | None:intergenic |
| TAATCTGACTTTATATGACA+TGG | 0.536052 | 6.1:-950107 | MS.gene82830:CDS |
| TGGAAAAGCTACTATTAAAG+TGG | 0.536708 | 6.1:-954592 | MS.gene82830:CDS |
| ATATATAAACCTAAAACAGC+TGG | 0.536981 | 6.1:+957892 | None:intergenic |
| ATGTGAAGAACTGGATTTCG+AGG | 0.537074 | 6.1:+941159 | None:intergenic |
| TTCTCTGAGCTATCCTGGTG+GGG | 0.537393 | 6.1:-955167 | MS.gene82830:CDS |
| AAATCAACATCTTTGCTCCA+TGG | 0.537965 | 6.1:+953030 | None:intergenic |
| CTCTTGAAAGCTTACTCTCC+AGG | 0.538146 | 6.1:-955208 | MS.gene82830:CDS |
| TATTCCACTTTCATTGCCCA+AGG | 0.539179 | 6.1:+954858 | None:intergenic |
| TATGATGGTCAGACTCGTAA+AGG | 0.539529 | 6.1:-944206 | MS.gene82830:CDS |
| GAGAATGCTCTGACAGATGA+TGG | 0.540435 | 6.1:-952979 | MS.gene82830:CDS |
| CACCCAAAGATGCTTGCCCA+GGG | 0.540620 | 6.1:+938134 | None:intergenic |
| GACAAGTCTAAATTTGTCCC+AGG | 0.540911 | 6.1:+953072 | None:intergenic |
| CGACATGAACACCGAGAGAT+GGG | 0.541116 | 6.1:+946835 | None:intergenic |
| AAGATGCCGTGTTCATTGAT+GGG | 0.541336 | 6.1:-944136 | MS.gene82830:CDS |
| CGATCAAGTGAAGTTCACCT+TGG | 0.542550 | 6.1:-954875 | MS.gene82830:CDS |
| ATTCTCCCCTCAGTGACTGT+GGG | 0.543954 | 6.1:-959445 | MS.gene82830:CDS |
| ACGGATGACTTTAAGGGTGT+AGG | 0.544149 | 6.1:+959096 | None:intergenic |
| CGAAATCCAGTTCTTCACAT+TGG | 0.544793 | 6.1:-941156 | MS.gene82830:CDS |
| CACAGTTGTGCAAGAAGTCA+TGG | 0.547302 | 6.1:-954902 | MS.gene82830:CDS |
| GCAAGTTTCTTCACTAAATG+TGG | 0.548579 | 6.1:-957920 | MS.gene82830:CDS |
| TTGTTGCTTGAATTATACTC+AGG | 0.548756 | 6.1:+960197 | None:intergenic |
| GATCAAGTGAAGTTCACCTT+GGG | 0.549943 | 6.1:-954874 | MS.gene82830:CDS |
| TGTTGAAGGCAATTCGGCAC+GGG | 0.549971 | 6.1:-941676 | MS.gene82830:intron |
| ACTGCTTCCTCCATTTGTAC+CGG | 0.550610 | 6.1:+948087 | None:intergenic |
| GAATCCTATACACAATATGA+TGG | 0.552283 | 6.1:-944221 | MS.gene82830:CDS |
| GGTGACGGAAACCACTTTGG+TGG | 0.553339 | 6.1:-953159 | MS.gene82830:CDS |
| GATCCAACAACAGTTTCTAC+AGG | 0.553560 | 6.1:+953622 | None:intergenic |
| TCTGTTTGCTTAGCTTACTG+TGG | 0.553752 | 6.1:-946865 | MS.gene82830:intron |
| TTTCATCTTCAATAGTCCAC+CGG | 0.554069 | 6.1:+946014 | None:intergenic |
| TGTTGACATTCTAATCCTGT+TGG | 0.554079 | 6.1:+950163 | None:intergenic |
| CAAGCCAAAGATCGTGCCAC+TGG | 0.554847 | 6.1:-944071 | MS.gene82830:CDS |
| TTCTCCCCTCAGTGACTGTG+GGG | 0.554953 | 6.1:-959444 | MS.gene82830:CDS |
| GTCCGTGCCTTCGACAATGA+AGG | 0.555588 | 6.1:-959987 | MS.gene82830:intron |
| GCAGGTGACGGAAACCACTT+TGG | 0.557095 | 6.1:-953162 | MS.gene82830:CDS |
| TTCTTGTGTCGAGGTTGCTG+AGG | 0.558127 | 6.1:-944033 | MS.gene82830:intron |
| GTGACAATGAAAACGGCAAA+TGG | 0.558519 | 6.1:-953583 | MS.gene82830:intron |
| CTTGCGAAATGAATCAGGAT+TGG | 0.558738 | 6.1:-951689 | MS.gene82830:intron |
| CGAAATTCACTGGAATCGCC+GGG | 0.558809 | 6.1:-938590 | MS.gene82830:CDS |
| AGGTAGCAGGAAAATTTCAT+GGG | 0.559274 | 6.1:+947486 | None:intergenic |
| ACTATTAGAATATCTGCAGC+TGG | 0.559413 | 6.1:-951850 | MS.gene82830:CDS |
| GGTAAATTTGTCAATTACTG+GGG | 0.559594 | 6.1:-950245 | MS.gene82830:CDS |
| ATTCTTTAGAAAGTATGGCA+TGG | 0.560419 | 6.1:+953265 | None:intergenic |
| GGAACATTAACAAGCCGATA+GGG | 0.560721 | 6.1:+959476 | None:intergenic |
| ACATAGTCTACAAATGGTTG+TGG | 0.560860 | 6.1:+937951 | None:intergenic |
| ATTGAGTGCACCAAATGCTC+CGG | 0.561529 | 6.1:+939631 | None:intergenic |
| GTCTAGTTCTGGTGATCCTG+TGG | 0.562106 | 6.1:-957860 | MS.gene82830:CDS |
| AAGGTGGCAGAGAGCTTGCA+TGG | 0.562506 | 6.1:-945117 | MS.gene82830:CDS |
| ATGAGTTAAATCTTGTCCCT+GGG | 0.564931 | 6.1:-953089 | MS.gene82830:CDS |
| GCCAAAATCACCTTTACTGG+TGG | 0.565920 | 6.1:+938549 | None:intergenic |
| TGCATCAAGGCTTTCACCAT+AGG | 0.566042 | 6.1:+939860 | None:intergenic |
| ATCCGTGGAAATATTCCTCA+AGG | 0.566468 | 6.1:-959079 | MS.gene82830:intron |
| AATCTGACTTTATATGACAT+GGG | 0.566735 | 6.1:-950106 | MS.gene82830:CDS |
| TCGACATGAACACCGAGAGA+TGG | 0.566739 | 6.1:+946834 | None:intergenic |
| AGTTCTGGTGATCCTGTGGA+AGG | 0.568235 | 6.1:-957856 | MS.gene82830:CDS |
| CTCATCAGCTATAAGTACAA+TGG | 0.568312 | 6.1:+952053 | None:intergenic |
| CTACAAGAGGGAAGGGAGAA+GGG | 0.568945 | 6.1:-937901 | MS.gene82830:CDS |
| AAGAATACCTTCATTGTCGA+AGG | 0.568995 | 6.1:+959980 | None:intergenic |
| CATGACTATTTATGTTCATG+TGG | 0.570350 | 6.1:-947809 | MS.gene82830:CDS |
| AACCTTGAGGAATATTTCCA+CGG | 0.572270 | 6.1:+959077 | None:intergenic |
| TAATAATACCTGTAAACGAA+TGG | 0.572335 | 6.1:+951075 | None:intergenic |
| TATTGGGAACCCCAAAGCCA+AGG | 0.572472 | 6.1:+944298 | None:intergenic |
| AATGATATTGCCGTTAGACA+TGG | 0.572723 | 6.1:-955247 | MS.gene82830:CDS |
| GGAAGCCAACATCTGATGGA+TGG | 0.572767 | 6.1:+953337 | None:intergenic |
| GTGGCCAAAGCTATTGGAGA+AGG | 0.572880 | 6.1:-940232 | MS.gene82830:CDS |
| CTCTGCATCCTGATGAACAC+CGG | 0.572943 | 6.1:+954816 | None:intergenic |
| GTACTTATAGCTGATGAGCC+AGG | 0.573008 | 6.1:-952048 | MS.gene82830:intron |
| AATTTATCCGTTGTTTCCTG+AGG | 0.573338 | 6.1:-946159 | MS.gene82830:intron |
| AGCCTTATGCCCGAAGCGAA+TGG | 0.573880 | 6.1:-959503 | MS.gene82830:CDS |
| TACAAATGATTCTCAAGTGG+TGG | 0.574163 | 6.1:-950200 | MS.gene82830:CDS |
| CAGAGTGAACAACTAGGAGT+TGG | 0.575015 | 6.1:-946194 | MS.gene82830:CDS |
| AGGAACATTAACAAGCCGAT+AGG | 0.575398 | 6.1:+959475 | None:intergenic |
| TACCTTCATTGTCGAAGGCA+CGG | 0.575503 | 6.1:+959985 | None:intergenic |
| GCTTAGCTTACTGTGGAAGG+TGG | 0.575808 | 6.1:-946858 | MS.gene82830:intron |
| CAGCTCCATCCATCAGATGT+TGG | 0.575979 | 6.1:-953342 | MS.gene82830:CDS |
| TATAAGTAAGTCCAAGAACA+AGG | 0.576790 | 6.1:+953315 | None:intergenic |
| TCTCCTTCCGACCACTGTAA+GGG | 0.576994 | 6.1:+960141 | None:intergenic |
| ACCATTAGTTGGGAGTATGA+TGG | 0.577074 | 6.1:+938342 | None:intergenic |
| CTCCTTCCGACCACTGTAAG+GGG | 0.577680 | 6.1:+960142 | None:intergenic |
| TTGTAGTTGTATAATAGGGA+GGG | 0.579278 | 6.1:+944264 | None:intergenic |
| TATATGGAGACAGATATGTC+TGG | 0.579323 | 6.1:+939586 | None:intergenic |
| AAATATATGAAGGCAGCGAT+CGG | 0.579501 | 6.1:+938092 | None:intergenic |
| CAAGGTCAATCACTTTGAGC+AGG | 0.580508 | 6.1:+942624 | None:intergenic |
| TCAGCTTCTGGTACTATCCA+GGG | 0.581380 | 6.1:-954624 | MS.gene82830:CDS |
| CTCAGGTTGACTCGATGACA+GGG | 0.582096 | 6.1:-958011 | MS.gene82830:CDS |
| GGTGAAAGCCTTGATGCACC+AGG | 0.582845 | 6.1:-939855 | MS.gene82830:CDS |
| GTAAATTTGTCAATTACTGG+GGG | 0.584314 | 6.1:-950244 | MS.gene82830:CDS |
| GTTCAAATGAAATGTCTCCT+CGG | 0.585368 | 6.1:-937977 | MS.gene82830:CDS |
| CCCATTTGCCACGGTAATAG+GGG | 0.587262 | 6.1:+951876 | None:intergenic |
| TGCCCCTTACAGTGGTCGGA+AGG | 0.587946 | 6.1:-960144 | MS.gene82830:CDS |
| TAGTGTATGCATCGAACTTG+GGG | 0.588304 | 6.1:-957987 | MS.gene82830:CDS |
| TTTCTGTGGATGCTCCAAAA+GGG | 0.589864 | 6.1:-940035 | MS.gene82830:CDS |
| TCTGTCAGTGAAATATATGA+AGG | 0.590152 | 6.1:+938082 | None:intergenic |
| TTCATCTTTATCAGTAACAG+TGG | 0.591551 | 6.1:-944333 | MS.gene82830:CDS |
| ACAAATGGTTGTGGCGTCCG+AGG | 0.592408 | 6.1:+937960 | None:intergenic |
| CAGACGTGGAAATTCAGTTG+GGG | 0.592436 | 6.1:-952139 | MS.gene82830:CDS |
| AAAAGGGAATGTCTACATCA+AGG | 0.594194 | 6.1:-942376 | MS.gene82830:intron |
| CTCCGTACTACAAGAGGGAA+GGG | 0.594355 | 6.1:-937908 | MS.gene82830:CDS |
| AGTGATCGCTTCTTGTGTCG+AGG | 0.594785 | 6.1:-944042 | MS.gene82830:CDS |
| AGCCAAGCTTCAGCTACAGA+AGG | 0.596723 | 6.1:+952102 | None:intergenic |
| ACAACAGTTACAGTGTTGAA+AGG | 0.599805 | 6.1:-940066 | MS.gene82830:CDS |
| AATAGTGCGCCCATTTGCCA+CGG | 0.602790 | 6.1:+951867 | None:intergenic |
| ATTGTACGTCAGGCAGGTGA+CGG | 0.602816 | 6.1:-953174 | MS.gene82830:CDS |
| TCCATTCTATATCTGCAACC+TGG | 0.603531 | 6.1:+949563 | None:intergenic |
| ATGATGGAGTTCTTGTGCAT+CGG | 0.603536 | 6.1:-952963 | MS.gene82830:CDS |
| ATGATAAAGTTTCTGGACAG+TGG | 0.603871 | 6.1:-940300 | MS.gene82830:CDS |
| ATACTGTGATTTGTGAAGCA+AGG | 0.604120 | 6.1:-946262 | MS.gene82830:CDS |
| CGATTGCCCCTTACAGTGGT+CGG | 0.604258 | 6.1:-960148 | MS.gene82830:CDS |
| TGAACTACGCTCGGCATGAG+CGG | 0.606668 | 6.1:+951915 | None:intergenic |
| ATATTGCCGTTAGACATGGC+TGG | 0.606813 | 6.1:-955243 | MS.gene82830:CDS |
| ACAAGACGTTTATAAAGCCC+AGG | 0.606992 | 6.1:+945034 | None:intergenic |
| CACTCAATACCCAAGTCGGA+AGG | 0.607582 | 6.1:-939616 | MS.gene82830:CDS |
| ATTGGAGAAGGTTCAGCCCA+AGG | 0.607726 | 6.1:-940220 | MS.gene82830:intron |
| AAGTCTCCGTGAACTACGCT+CGG | 0.607779 | 6.1:+951906 | None:intergenic |
| TATGCTACAGATGTGAAGAC+TGG | 0.607997 | 6.1:-960110 | MS.gene82830:CDS |
| ATTCCGCCAGCCATGTCTAA+CGG | 0.609366 | 6.1:+955237 | None:intergenic |
| ATGTTGAAGGCAATTCGGCA+CGG | 0.609727 | 6.1:-941677 | MS.gene82830:intron |
| AGAAGTTGTATCCTTTGGCA+GGG | 0.610183 | 6.1:+939992 | None:intergenic |
| TACATGTCCAAAATGTTGCA+TGG | 0.610573 | 6.1:+947561 | None:intergenic |
| GCCTGACGTACAATGAAGGG+TGG | 0.611598 | 6.1:+953183 | None:intergenic |
| ACTCCGTACTACAAGAGGGA+AGG | 0.611956 | 6.1:-937909 | MS.gene82830:CDS |
| GAGCGATCATAATCAAATCC+CGG | 0.612072 | 6.1:+938572 | None:intergenic |
| AAAACTTACATAACCATCGT+GGG | 0.612821 | 6.1:-939171 | MS.gene82830:CDS |
| ATAATAGGGAGGGAGAATCC+AGG | 0.612998 | 6.1:+944274 | None:intergenic |
| TCTCCCCTCAGTGACTGTGG+GGG | 0.614111 | 6.1:-959443 | MS.gene82830:CDS |
| TCAGAAGAGAGTCAAATTGG+TGG | 0.616792 | 6.1:-945075 | MS.gene82830:CDS |
| CTAGATTCAAGTCCTTCCAC+AGG | 0.617019 | 6.1:+957844 | None:intergenic |
| ATTGGGAACCCCAAAGCCAA+GGG | 0.617382 | 6.1:+944299 | None:intergenic |
| GAATATCACCAATTCAGTCA+TGG | 0.618957 | 6.1:-953246 | MS.gene82830:CDS |
| GCTTCAGCTACAGAAGGCAG+AGG | 0.621907 | 6.1:+952108 | None:intergenic |
| ATAAACCTAAAACAGCTGGC+AGG | 0.622109 | 6.1:+957896 | None:intergenic |
| ATATTTCAATCCTAATGCAA+AGG | 0.622370 | 6.1:-950814 | MS.gene82830:intron |
| CGATCGATTGCCCCTTACAG+TGG | 0.623456 | 6.1:-960152 | MS.gene82830:CDS |
| TACCTTCACCACATCATCAG+TGG | 0.624516 | 6.1:-958056 | MS.gene82830:CDS |
| GATGCAGAGTTAAAAGCTGT+AGG | 0.624692 | 6.1:-954802 | MS.gene82830:CDS |
| AAGCGAATGGACTACCCTAT+CGG | 0.625623 | 6.1:-959490 | MS.gene82830:CDS |
| CCTGCCTGACGTACAATGAA+GGG | 0.625711 | 6.1:+953180 | None:intergenic |
| TATCATTGTTGAAGATACAA+GGG | 0.625945 | 6.1:-957956 | MS.gene82830:CDS |
| AGTAGATCCGTTAACTGGAG+TGG | 0.626470 | 6.1:-940251 | MS.gene82830:CDS |
| AGCTATCCCTAATCCTTTAG+GGG | 0.629726 | 6.1:+950129 | None:intergenic |
| TCTGCATCCTGATGAACACC+GGG | 0.630196 | 6.1:+954817 | None:intergenic |
| CAAAACTTACATAACCATCG+TGG | 0.631223 | 6.1:-939172 | MS.gene82830:CDS |
| TTGTCGGCGGACCTGAACCA+TGG | 0.632414 | 6.1:-953047 | MS.gene82830:CDS |
| CCAAAATCACCTTTACTGGT+GGG | 0.633055 | 6.1:+938550 | None:intergenic |
| AATGGATTCAGATCATGTCA+GGG | 0.634336 | 6.1:-949546 | MS.gene82830:CDS |
| AACGTTCCATACCCTGCCAA+AGG | 0.637448 | 6.1:-940003 | MS.gene82830:CDS |
| GAACACGGCATCTTTCTGCA+TGG | 0.637545 | 6.1:+944145 | None:intergenic |
| TATCGACTTCAAGGAAGTGA+CGG | 0.637550 | 6.1:-961729 | MS.gene82830:CDS |
| GAAAGGACATAGTATTTCTG+TGG | 0.638814 | 6.1:-940049 | MS.gene82830:CDS |
| GACCACTGATGATGTGGTGA+AGG | 0.639141 | 6.1:+958054 | None:intergenic |
| ACTGAAGGTACGTCAAGCCA+TGG | 0.639622 | 6.1:-939702 | MS.gene82830:intron |
| AGATGCCGTGTTCATTGATG+GGG | 0.639725 | 6.1:-944135 | MS.gene82830:CDS |
| ATCTGACTTTATATGACATG+GGG | 0.640193 | 6.1:-950105 | MS.gene82830:CDS |
| TACACCCTTAAAGTCATCCG+TGG | 0.640453 | 6.1:-959094 | MS.gene82830:CDS |
| ACAAAGTCAAGCTATTAGGG+TGG | 0.641111 | 6.1:-947536 | MS.gene82830:CDS |
| TTATTGGCCGGTACAAATGG+AGG | 0.641687 | 6.1:-948094 | MS.gene82830:CDS |
| CAAGTTCAGCACCAACAGCA+AGG | 0.641916 | 6.1:+942606 | None:intergenic |
| GGTGCACTCAATACCCAAGT+CGG | 0.643113 | 6.1:-939620 | MS.gene82830:CDS |
| GCCAGTGGTAACCACCAAAG+TGG | 0.643778 | 6.1:+953148 | None:intergenic |
| ACAGAAGTCAGACTACGTGC+TGG | 0.645403 | 6.1:-941618 | MS.gene82830:intron |
| TTAGACTTGTCACTTGTCGG+CGG | 0.645503 | 6.1:-953060 | MS.gene82830:CDS |
| ATATTGTGTATAGGATTCTG+AGG | 0.645871 | 6.1:+944226 | None:intergenic |
| AATGCACTGACACAATCTCA+TGG | 0.646306 | 6.1:+959230 | None:intergenic |
| ACAAGTGCTCAACTAGTGCA+AGG | 0.646496 | 6.1:-960178 | MS.gene82830:CDS |
| CAGTTCTCCAGTAATCCGAC+CGG | 0.648057 | 6.1:+955281 | None:intergenic |
| TGTTACAAATGATTCTCAAG+TGG | 0.648141 | 6.1:-950203 | MS.gene82830:CDS |
| TGTTTATGGCGAGAACATCA+GGG | 0.649580 | 6.1:+942412 | None:intergenic |
| ACTTGGTGTAGGTTGTGCAA+AGG | 0.650603 | 6.1:-954697 | MS.gene82830:intron |
| CTTACCGGTATTTCCCACGA+TGG | 0.652769 | 6.1:+939158 | None:intergenic |
| GTATAGGATTCTGAGGAGGA+AGG | 0.653047 | 6.1:+944233 | None:intergenic |
| AGATTAACATCGGTGATGTG+AGG | 0.653637 | 6.1:+961786 | None:intergenic |
| TCGCGATACCCCTATTACCG+TGG | 0.654492 | 6.1:-951884 | MS.gene82830:CDS |
| ACAAGTCTAAATTTGTCCCA+GGG | 0.656809 | 6.1:+953073 | None:intergenic |
| GCAGAGTTAAAAGCTGTAGG+AGG | 0.657253 | 6.1:-954799 | MS.gene82830:intron |
| ACCCAAAGATGCTTGCCCAG+GGG | 0.657528 | 6.1:+938135 | None:intergenic |
| AAAGATGAACTGTACAACAT+TGG | 0.657911 | 6.1:+944347 | None:intergenic |
| ACAAGAGATTTATATTACAG+AGG | 0.660216 | 6.1:-957740 | MS.gene82830:intron |
| CCTGACGTACAATGAAGGGT+GGG | 0.661779 | 6.1:+953184 | None:intergenic |
| CATACCATATATGACGCACC+AGG | 0.662266 | 6.1:+947466 | None:intergenic |
| AGGGAACGGCTGCACCAACA+AGG | 0.663543 | 6.1:+959116 | None:intergenic |
| CATATGCAGAGTGAACAACT+AGG | 0.668244 | 6.1:-946200 | MS.gene82830:CDS |
| GCTTCTCTGAGCTATCCTGG+TGG | 0.668789 | 6.1:-955169 | MS.gene82830:CDS |
| CTAGTCCTCTAATGGCACGT+TGG | 0.670500 | 6.1:-957825 | MS.gene82830:CDS |
| GGTAGCAGGAAAATTTCATG+GGG | 0.670609 | 6.1:+947487 | None:intergenic |
| ATGGAATGGAGACTTCAACC+AGG | 0.671593 | 6.1:+953671 | None:intergenic |
| TGAAGTTGCAGGTGATGCAA+TGG | 0.672660 | 6.1:+938019 | None:intergenic |
| AATTAGAATAGCCAGTAAGG+AGG | 0.672871 | 6.1:-942648 | MS.gene82830:CDS |
| TTGGGGCCAAGTCAAGCCAG+TGG | 0.675536 | 6.1:+953133 | None:intergenic |
| TTAGGTGCTGACTTTCAAGG+TGG | 0.676532 | 6.1:-945133 | MS.gene82830:intron |
| ATAGAGTACCCGATATATAG+CGG | 0.677097 | 6.1:+939795 | None:intergenic |
| TCTATCCCCATCAATGAACA+CGG | 0.678021 | 6.1:+944130 | None:intergenic |
| GATGCAGACCACTGATGATG+TGG | 0.678867 | 6.1:+958048 | None:intergenic |
| TAAGGTTTATGATTACCGGT+CGG | 0.679226 | 6.1:-955296 | MS.gene82830:CDS |
| AGCGATCACTATTCTACCAG+TGG | 0.680760 | 6.1:+944055 | None:intergenic |
| ATAAGTAAGTCCAAGAACAA+GGG | 0.683047 | 6.1:+953316 | None:intergenic |
| TGAAACTCCGTACTACAAGA+GGG | 0.688814 | 6.1:-937913 | MS.gene82830:CDS |
| ACTGTCACCTCAGGAAACAA+CGG | 0.691474 | 6.1:+946152 | None:intergenic |
| GTATTGATAGATATTCTGGA+CGG | 0.695401 | 6.1:-946782 | MS.gene82830:CDS |
| ATGGATTCAGATCATGTCAG+GGG | 0.696691 | 6.1:-949545 | MS.gene82830:CDS |
| TTGTGTATAGGATTCTGAGG+AGG | 0.700457 | 6.1:+944229 | None:intergenic |
| AGCTATGTAAAAGTTACCGG+TGG | 0.700612 | 6.1:-946030 | MS.gene82830:CDS |
| GGACCAGAAGAAGCATGCGG+TGG | 0.701811 | 6.1:+961807 | None:intergenic |
| GAAAATGGAGCTTACAAGTG+TGG | 0.702200 | 6.1:+950060 | None:intergenic |
| TGGATTTCGAGGATATACAT+GGG | 0.705886 | 6.1:+941170 | None:intergenic |
| ATGGGAACTTAGCAGCTGTG+AGG | 0.706404 | 6.1:-951776 | MS.gene82830:CDS |
| GGATCACCAGAACTAGACAA+AGG | 0.707585 | 6.1:+957865 | None:intergenic |
| CGGTAAAAGAAGATTAACAT+CGG | 0.709843 | 6.1:+961776 | None:intergenic |
| TGATTCACTAAACTACGATG+AGG | 0.710220 | 6.1:-954559 | MS.gene82830:intron |
| GAAAGCCTTGATGCACCAGG+AGG | 0.712584 | 6.1:-939852 | MS.gene82830:CDS |
| TTGCCGTTAGACATGGCTGG+CGG | 0.715981 | 6.1:-955240 | MS.gene82830:CDS |
| TAAATTTGTCAATTACTGGG+GGG | 0.720426 | 6.1:-950243 | MS.gene82830:CDS |
| TGAGGACCAGAAGAAGCATG+CGG | 0.725744 | 6.1:+961804 | None:intergenic |
| TTAGTGAAGAAACTTGCACA+TGG | 0.737473 | 6.1:+957926 | None:intergenic |
| GTAGCAGGAAAATTTCATGG+GGG | 0.818365 | 6.1:+947488 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 937878 | 961913 | 937878 | ID=MS.gene82830 |
| chr6.1 | mRNA | 937878 | 961913 | 937878 | ID=MS.gene82830.t1;Parent=MS.gene82830 |
| chr6.1 | exon | 961641 | 961913 | 961641 | ID=MS.gene82830.t1.exon1;Parent=MS.gene82830.t1 |
| chr6.1 | CDS | 961641 | 961913 | 961641 | ID=cds.MS.gene82830.t1;Parent=MS.gene82830.t1 |
| chr6.1 | exon | 960357 | 960397 | 960357 | ID=MS.gene82830.t1.exon2;Parent=MS.gene82830.t1 |
| chr6.1 | CDS | 960357 | 960397 | 960357 | ID=cds.MS.gene82830.t1;Parent=MS.gene82830.t1 |
| chr6.1 | exon | 959988 | 960253 | 959988 | ID=MS.gene82830.t1.exon3;Parent=MS.gene82830.t1 |
| chr6.1 | CDS | 959988 | 960253 | 959988 | ID=cds.MS.gene82830.t1;Parent=MS.gene82830.t1 |
| chr6.1 | exon | 959400 | 959566 | 959400 | ID=MS.gene82830.t1.exon4;Parent=MS.gene82830.t1 |
| chr6.1 | CDS | 959400 | 959566 | 959400 | ID=cds.MS.gene82830.t1;Parent=MS.gene82830.t1 |
| chr6.1 | exon | 959080 | 959296 | 959080 | ID=MS.gene82830.t1.exon5;Parent=MS.gene82830.t1 |
| chr6.1 | CDS | 959080 | 959296 | 959080 | ID=cds.MS.gene82830.t1;Parent=MS.gene82830.t1 |
| chr6.1 | exon | 957741 | 958087 | 957741 | ID=MS.gene82830.t1.exon6;Parent=MS.gene82830.t1 |
| chr6.1 | CDS | 957741 | 958087 | 957741 | ID=cds.MS.gene82830.t1;Parent=MS.gene82830.t1 |
| chr6.1 | exon | 955150 | 955329 | 955150 | ID=MS.gene82830.t1.exon7;Parent=MS.gene82830.t1 |
| chr6.1 | CDS | 955150 | 955329 | 955150 | ID=cds.MS.gene82830.t1;Parent=MS.gene82830.t1 |
| chr6.1 | exon | 954800 | 954929 | 954800 | ID=MS.gene82830.t1.exon8;Parent=MS.gene82830.t1 |
| chr6.1 | CDS | 954800 | 954929 | 954800 | ID=cds.MS.gene82830.t1;Parent=MS.gene82830.t1 |
| chr6.1 | exon | 954560 | 954708 | 954560 | ID=MS.gene82830.t1.exon9;Parent=MS.gene82830.t1 |
| chr6.1 | CDS | 954560 | 954708 | 954560 | ID=cds.MS.gene82830.t1;Parent=MS.gene82830.t1 |
| chr6.1 | exon | 953584 | 953695 | 953584 | ID=MS.gene82830.t1.exon10;Parent=MS.gene82830.t1 |
| chr6.1 | CDS | 953584 | 953695 | 953584 | ID=cds.MS.gene82830.t1;Parent=MS.gene82830.t1 |
| chr6.1 | exon | 952906 | 953486 | 952906 | ID=MS.gene82830.t1.exon11;Parent=MS.gene82830.t1 |
| chr6.1 | CDS | 952906 | 953486 | 952906 | ID=cds.MS.gene82830.t1;Parent=MS.gene82830.t1 |
| chr6.1 | exon | 952049 | 952172 | 952049 | ID=MS.gene82830.t1.exon12;Parent=MS.gene82830.t1 |
| chr6.1 | CDS | 952049 | 952172 | 952049 | ID=cds.MS.gene82830.t1;Parent=MS.gene82830.t1 |
| chr6.1 | exon | 951690 | 951964 | 951690 | ID=MS.gene82830.t1.exon13;Parent=MS.gene82830.t1 |
| chr6.1 | CDS | 951690 | 951964 | 951690 | ID=cds.MS.gene82830.t1;Parent=MS.gene82830.t1 |
| chr6.1 | exon | 951084 | 951191 | 951084 | ID=MS.gene82830.t1.exon14;Parent=MS.gene82830.t1 |
| chr6.1 | CDS | 951084 | 951191 | 951084 | ID=cds.MS.gene82830.t1;Parent=MS.gene82830.t1 |
| chr6.1 | exon | 950815 | 950877 | 950815 | ID=MS.gene82830.t1.exon15;Parent=MS.gene82830.t1 |
| chr6.1 | CDS | 950815 | 950877 | 950815 | ID=cds.MS.gene82830.t1;Parent=MS.gene82830.t1 |
| chr6.1 | exon | 950075 | 950266 | 950075 | ID=MS.gene82830.t1.exon16;Parent=MS.gene82830.t1 |
| chr6.1 | CDS | 950075 | 950266 | 950075 | ID=cds.MS.gene82830.t1;Parent=MS.gene82830.t1 |
| chr6.1 | exon | 949528 | 949587 | 949528 | ID=MS.gene82830.t1.exon17;Parent=MS.gene82830.t1 |
| chr6.1 | CDS | 949528 | 949587 | 949528 | ID=cds.MS.gene82830.t1;Parent=MS.gene82830.t1 |
| chr6.1 | exon | 948072 | 948140 | 948072 | ID=MS.gene82830.t1.exon18;Parent=MS.gene82830.t1 |
| chr6.1 | CDS | 948072 | 948140 | 948072 | ID=cds.MS.gene82830.t1;Parent=MS.gene82830.t1 |
| chr6.1 | exon | 947693 | 947839 | 947693 | ID=MS.gene82830.t1.exon19;Parent=MS.gene82830.t1 |
| chr6.1 | CDS | 947693 | 947839 | 947693 | ID=cds.MS.gene82830.t1;Parent=MS.gene82830.t1 |
| chr6.1 | exon | 947471 | 947590 | 947471 | ID=MS.gene82830.t1.exon20;Parent=MS.gene82830.t1 |
| chr6.1 | CDS | 947471 | 947590 | 947471 | ID=cds.MS.gene82830.t1;Parent=MS.gene82830.t1 |
| chr6.1 | exon | 946755 | 946874 | 946755 | ID=MS.gene82830.t1.exon21;Parent=MS.gene82830.t1 |
| chr6.1 | CDS | 946755 | 946874 | 946755 | ID=cds.MS.gene82830.t1;Parent=MS.gene82830.t1 |
| chr6.1 | exon | 946160 | 946315 | 946160 | ID=MS.gene82830.t1.exon22;Parent=MS.gene82830.t1 |
| chr6.1 | CDS | 946160 | 946315 | 946160 | ID=cds.MS.gene82830.t1;Parent=MS.gene82830.t1 |
| chr6.1 | exon | 946012 | 946074 | 946012 | ID=MS.gene82830.t1.exon23;Parent=MS.gene82830.t1 |
| chr6.1 | CDS | 946012 | 946074 | 946012 | ID=cds.MS.gene82830.t1;Parent=MS.gene82830.t1 |
| chr6.1 | exon | 945027 | 945151 | 945027 | ID=MS.gene82830.t1.exon24;Parent=MS.gene82830.t1 |
| chr6.1 | CDS | 945027 | 945151 | 945027 | ID=cds.MS.gene82830.t1;Parent=MS.gene82830.t1 |
| chr6.1 | exon | 944034 | 944439 | 944034 | ID=MS.gene82830.t1.exon25;Parent=MS.gene82830.t1 |
| chr6.1 | CDS | 944034 | 944439 | 944034 | ID=cds.MS.gene82830.t1;Parent=MS.gene82830.t1 |
| chr6.1 | exon | 942576 | 942678 | 942576 | ID=MS.gene82830.t1.exon26;Parent=MS.gene82830.t1 |
| chr6.1 | CDS | 942576 | 942678 | 942576 | ID=cds.MS.gene82830.t1;Parent=MS.gene82830.t1 |
| chr6.1 | exon | 942377 | 942489 | 942377 | ID=MS.gene82830.t1.exon27;Parent=MS.gene82830.t1 |
| chr6.1 | CDS | 942377 | 942489 | 942377 | ID=cds.MS.gene82830.t1;Parent=MS.gene82830.t1 |
| chr6.1 | exon | 941619 | 941690 | 941619 | ID=MS.gene82830.t1.exon28;Parent=MS.gene82830.t1 |
| chr6.1 | CDS | 941619 | 941690 | 941619 | ID=cds.MS.gene82830.t1;Parent=MS.gene82830.t1 |
| chr6.1 | exon | 941130 | 941205 | 941130 | ID=MS.gene82830.t1.exon29;Parent=MS.gene82830.t1 |
| chr6.1 | CDS | 941130 | 941205 | 941130 | ID=cds.MS.gene82830.t1;Parent=MS.gene82830.t1 |
| chr6.1 | exon | 940221 | 940328 | 940221 | ID=MS.gene82830.t1.exon30;Parent=MS.gene82830.t1 |
| chr6.1 | CDS | 940221 | 940328 | 940221 | ID=cds.MS.gene82830.t1;Parent=MS.gene82830.t1 |
| chr6.1 | exon | 939979 | 940120 | 939979 | ID=MS.gene82830.t1.exon31;Parent=MS.gene82830.t1 |
| chr6.1 | CDS | 939979 | 940120 | 939979 | ID=cds.MS.gene82830.t1;Parent=MS.gene82830.t1 |
| chr6.1 | exon | 939804 | 939887 | 939804 | ID=MS.gene82830.t1.exon32;Parent=MS.gene82830.t1 |
| chr6.1 | CDS | 939804 | 939887 | 939804 | ID=cds.MS.gene82830.t1;Parent=MS.gene82830.t1 |
| chr6.1 | exon | 939501 | 939717 | 939501 | ID=MS.gene82830.t1.exon33;Parent=MS.gene82830.t1 |
| chr6.1 | CDS | 939501 | 939717 | 939501 | ID=cds.MS.gene82830.t1;Parent=MS.gene82830.t1 |
| chr6.1 | exon | 939163 | 939229 | 939163 | ID=MS.gene82830.t1.exon34;Parent=MS.gene82830.t1 |
| chr6.1 | CDS | 939163 | 939229 | 939163 | ID=cds.MS.gene82830.t1;Parent=MS.gene82830.t1 |
| chr6.1 | exon | 938525 | 938616 | 938525 | ID=MS.gene82830.t1.exon35;Parent=MS.gene82830.t1 |
| chr6.1 | CDS | 938525 | 938616 | 938525 | ID=cds.MS.gene82830.t1;Parent=MS.gene82830.t1 |
| chr6.1 | exon | 938344 | 938404 | 938344 | ID=MS.gene82830.t1.exon36;Parent=MS.gene82830.t1 |
| chr6.1 | CDS | 938344 | 938404 | 938344 | ID=cds.MS.gene82830.t1;Parent=MS.gene82830.t1 |
| chr6.1 | exon | 937878 | 938236 | 937878 | ID=MS.gene82830.t1.exon37;Parent=MS.gene82830.t1 |
| chr6.1 | CDS | 937878 | 938236 | 937878 | ID=cds.MS.gene82830.t1;Parent=MS.gene82830.t1 |
| Gene Sequence |
| Protein sequence |
