Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82984.t1 | XP_003607777.1 | 79.6 | 275 | 12 | 1 | 1 | 231 | 195 | 469 | 6.90E-118 | 433.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82984.t1 | I1L3T1 | 46.5 | 273 | 100 | 3 | 1 | 228 | 205 | 476 | 5.1e-61 | 235.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82984.t1 | G7JGC5 | 79.6 | 275 | 12 | 1 | 1 | 231 | 195 | 469 | 5.0e-118 | 433.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049825 | MS.gene82984 | 0.809794 | 1.59E-50 | -1.69E-46 |
| MS.gene049873 | MS.gene82984 | 0.800607 | 1.33E-48 | -1.69E-46 |
| MS.gene050201 | MS.gene82984 | 0.818201 | 2.22E-52 | -1.69E-46 |
| MS.gene052358 | MS.gene82984 | -0.80562 | 1.22E-49 | -1.69E-46 |
| MS.gene053294 | MS.gene82984 | 0.801206 | 1.00E-48 | -1.69E-46 |
| MS.gene05954 | MS.gene82984 | 0.819161 | 1.34E-52 | -1.69E-46 |
| MS.gene059625 | MS.gene82984 | 0.814451 | 1.53E-51 | -1.69E-46 |
| MS.gene060521 | MS.gene82984 | 0.802833 | 4.65E-49 | -1.69E-46 |
| MS.gene060634 | MS.gene82984 | -0.827314 | 1.68E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82984.t1 | MTR_4g082820 | 79.636 | 275 | 12 | 1 | 1 | 231 | 195 | 469 | 7.41e-152 | 431 |
| MS.gene82984.t1 | MTR_4g082810 | 63.084 | 214 | 31 | 4 | 1 | 170 | 201 | 410 | 1.23e-79 | 244 |
| MS.gene82984.t1 | MTR_6g078320 | 43.116 | 276 | 111 | 3 | 1 | 232 | 213 | 486 | 1.12e-68 | 219 |
| MS.gene82984.t1 | MTR_3g009510 | 29.137 | 278 | 135 | 7 | 6 | 225 | 203 | 476 | 1.96e-28 | 112 |
| MS.gene82984.t1 | MTR_6g033675 | 28.947 | 266 | 134 | 7 | 12 | 230 | 212 | 469 | 4.69e-25 | 102 |
| MS.gene82984.t1 | MTR_6g033625 | 29.818 | 275 | 135 | 9 | 1 | 228 | 204 | 467 | 5.45e-25 | 102 |
| MS.gene82984.t1 | MTR_6g033725 | 28.159 | 277 | 141 | 7 | 1 | 230 | 201 | 466 | 5.97e-23 | 96.7 |
| MS.gene82984.t1 | MTR_6g033615 | 27.737 | 274 | 138 | 8 | 1 | 226 | 190 | 451 | 2.28e-20 | 89.4 |
| MS.gene82984.t1 | MTR_8g006710 | 40.113 | 177 | 83 | 9 | 12 | 177 | 210 | 374 | 5.28e-20 | 88.2 |
| MS.gene82984.t1 | MTR_8g006730 | 38.503 | 187 | 94 | 8 | 1 | 177 | 200 | 375 | 1.67e-19 | 87.0 |
| MS.gene82984.t1 | MTR_1g019510 | 27.636 | 275 | 140 | 7 | 7 | 230 | 202 | 468 | 2.26e-19 | 86.7 |
| MS.gene82984.t1 | MTR_6g488280 | 35.000 | 180 | 91 | 7 | 10 | 177 | 208 | 373 | 3.87e-19 | 85.9 |
| MS.gene82984.t1 | MTR_0428s0010 | 35.000 | 180 | 91 | 7 | 10 | 177 | 208 | 373 | 3.87e-19 | 85.9 |
| MS.gene82984.t1 | MTR_8g027885 | 30.224 | 268 | 125 | 8 | 11 | 226 | 216 | 473 | 7.72e-19 | 85.1 |
| MS.gene82984.t1 | MTR_5g070090 | 30.800 | 250 | 131 | 10 | 11 | 222 | 213 | 458 | 8.12e-19 | 84.7 |
| MS.gene82984.t1 | MTR_8g027870 | 30.224 | 268 | 125 | 8 | 11 | 226 | 216 | 473 | 9.90e-19 | 84.7 |
| MS.gene82984.t1 | MTR_5g090580 | 30.233 | 172 | 107 | 6 | 7 | 171 | 205 | 370 | 1.12e-18 | 84.3 |
| MS.gene82984.t1 | MTR_8g074550 | 33.854 | 192 | 94 | 8 | 6 | 171 | 202 | 386 | 1.48e-18 | 84.3 |
| MS.gene82984.t1 | MTR_5g090620 | 34.259 | 108 | 67 | 1 | 7 | 114 | 204 | 307 | 1.48e-18 | 84.3 |
| MS.gene82984.t1 | MTR_8g006270 | 27.068 | 266 | 136 | 7 | 12 | 225 | 204 | 463 | 1.85e-18 | 84.0 |
| MS.gene82984.t1 | MTR_6g033660 | 25.632 | 277 | 148 | 7 | 1 | 230 | 203 | 468 | 3.43e-18 | 83.2 |
| MS.gene82984.t1 | MTR_5g070040 | 28.016 | 257 | 136 | 8 | 11 | 223 | 213 | 464 | 4.21e-18 | 82.8 |
| MS.gene82984.t1 | MTR_2g098430 | 28.959 | 221 | 138 | 8 | 12 | 224 | 217 | 426 | 6.82e-18 | 82.4 |
| MS.gene82984.t1 | MTR_6g005600 | 37.912 | 182 | 91 | 8 | 12 | 180 | 208 | 380 | 8.03e-18 | 82.0 |
| MS.gene82984.t1 | MTR_5g098930 | 30.233 | 172 | 109 | 6 | 7 | 171 | 196 | 363 | 8.34e-18 | 82.0 |
| MS.gene82984.t1 | MTR_5g090700 | 29.651 | 172 | 108 | 6 | 7 | 171 | 207 | 372 | 1.06e-17 | 81.6 |
| MS.gene82984.t1 | MTR_8g012635 | 33.690 | 187 | 107 | 6 | 3 | 177 | 200 | 381 | 1.24e-17 | 81.6 |
| MS.gene82984.t1 | MTR_6g023665 | 28.938 | 273 | 129 | 10 | 7 | 226 | 212 | 472 | 1.73e-17 | 81.3 |
| MS.gene82984.t1 | MTR_5g090670 | 29.885 | 174 | 107 | 6 | 7 | 171 | 205 | 372 | 7.94e-17 | 79.3 |
| MS.gene82984.t1 | MTR_8g012650 | 31.217 | 189 | 113 | 6 | 1 | 177 | 198 | 381 | 9.27e-17 | 79.0 |
| MS.gene82984.t1 | MTR_8g009073 | 31.609 | 174 | 105 | 5 | 12 | 177 | 78 | 245 | 1.46e-16 | 77.8 |
| MS.gene82984.t1 | MTR_5g031840 | 34.637 | 179 | 89 | 8 | 11 | 177 | 214 | 376 | 1.57e-16 | 78.2 |
| MS.gene82984.t1 | MTR_0036s0220 | 32.022 | 178 | 100 | 5 | 9 | 177 | 226 | 391 | 1.73e-16 | 78.2 |
| MS.gene82984.t1 | MTR_8g465670 | 31.073 | 177 | 96 | 7 | 7 | 172 | 207 | 368 | 2.46e-16 | 77.8 |
| MS.gene82984.t1 | MTR_0184s0040 | 25.448 | 279 | 149 | 8 | 1 | 227 | 211 | 482 | 2.81e-16 | 77.4 |
| MS.gene82984.t1 | MTR_0078s0190 | 25.448 | 279 | 149 | 8 | 1 | 227 | 211 | 482 | 2.81e-16 | 77.4 |
| MS.gene82984.t1 | MTR_8g009073 | 31.609 | 174 | 105 | 5 | 12 | 177 | 207 | 374 | 3.28e-16 | 77.4 |
| MS.gene82984.t1 | MTR_8g009055 | 26.909 | 275 | 143 | 7 | 7 | 229 | 202 | 470 | 4.63e-16 | 77.0 |
| MS.gene82984.t1 | MTR_8g066610 | 36.000 | 175 | 92 | 7 | 12 | 177 | 219 | 382 | 4.77e-16 | 77.0 |
| MS.gene82984.t1 | MTR_2g040530 | 31.176 | 170 | 98 | 7 | 11 | 171 | 206 | 365 | 4.97e-16 | 76.6 |
| MS.gene82984.t1 | MTR_5g464810 | 35.099 | 151 | 78 | 5 | 9 | 152 | 226 | 363 | 5.28e-16 | 76.6 |
| MS.gene82984.t1 | MTR_5g064240 | 35.099 | 151 | 78 | 5 | 9 | 152 | 226 | 363 | 5.28e-16 | 76.6 |
| MS.gene82984.t1 | MTR_5g090630 | 29.213 | 178 | 113 | 6 | 1 | 171 | 190 | 361 | 5.60e-16 | 76.6 |
| MS.gene82984.t1 | MTR_5g090600 | 32.432 | 111 | 70 | 2 | 7 | 117 | 201 | 306 | 6.05e-16 | 76.6 |
| MS.gene82984.t1 | MTR_4g485620 | 37.405 | 131 | 71 | 4 | 44 | 170 | 227 | 350 | 6.80e-16 | 76.3 |
| MS.gene82984.t1 | MTR_5g090660 | 29.651 | 172 | 108 | 6 | 7 | 171 | 203 | 368 | 6.93e-16 | 76.6 |
| MS.gene82984.t1 | MTR_8g006220 | 31.148 | 183 | 96 | 7 | 7 | 172 | 206 | 375 | 9.77e-16 | 75.9 |
| MS.gene82984.t1 | MTR_4g094220 | 25.830 | 271 | 141 | 5 | 6 | 226 | 219 | 479 | 1.27e-15 | 75.5 |
| MS.gene82984.t1 | MTR_7g117170 | 37.500 | 176 | 94 | 7 | 12 | 177 | 216 | 385 | 1.49e-15 | 75.5 |
| MS.gene82984.t1 | MTR_2g046820 | 31.176 | 170 | 98 | 7 | 11 | 171 | 204 | 363 | 1.82e-15 | 75.1 |
| MS.gene82984.t1 | MTR_5g464760 | 29.317 | 249 | 117 | 10 | 9 | 213 | 226 | 459 | 1.84e-15 | 75.1 |
| MS.gene82984.t1 | MTR_8g088560 | 25.714 | 280 | 137 | 10 | 1 | 226 | 196 | 458 | 1.99e-15 | 75.1 |
| MS.gene82984.t1 | MTR_5g090610 | 27.528 | 178 | 116 | 6 | 1 | 171 | 185 | 356 | 2.91e-15 | 74.7 |
| MS.gene82984.t1 | MTR_8g008990 | 28.470 | 281 | 133 | 9 | 7 | 229 | 202 | 472 | 2.97e-15 | 74.7 |
| MS.gene82984.t1 | MTR_8g009050 | 28.159 | 277 | 137 | 9 | 7 | 229 | 202 | 470 | 6.32e-15 | 73.6 |
| MS.gene82984.t1 | MTR_1g107380 | 26.667 | 270 | 129 | 11 | 6 | 222 | 216 | 469 | 6.53e-15 | 73.6 |
| MS.gene82984.t1 | MTR_3g084530 | 32.353 | 170 | 97 | 7 | 13 | 171 | 211 | 373 | 7.03e-15 | 73.6 |
| MS.gene82984.t1 | MTR_3g084540 | 33.333 | 168 | 94 | 8 | 13 | 169 | 211 | 371 | 7.23e-15 | 73.6 |
| MS.gene82984.t1 | MTR_2g046750 | 28.235 | 170 | 103 | 7 | 11 | 171 | 207 | 366 | 7.25e-15 | 73.6 |
| MS.gene82984.t1 | MTR_5g019580 | 27.018 | 285 | 142 | 10 | 7 | 231 | 206 | 484 | 7.93e-15 | 73.2 |
| MS.gene82984.t1 | MTR_5g019580 | 27.018 | 285 | 142 | 10 | 7 | 231 | 230 | 508 | 8.27e-15 | 73.2 |
| MS.gene82984.t1 | MTR_8g077590 | 32.121 | 165 | 100 | 4 | 12 | 171 | 211 | 368 | 1.31e-14 | 72.8 |
| MS.gene82984.t1 | MTR_0078s0010 | 30.899 | 178 | 110 | 6 | 1 | 171 | 196 | 367 | 1.46e-14 | 72.4 |
| MS.gene82984.t1 | MTR_8g083290 | 30.435 | 184 | 99 | 6 | 6 | 177 | 204 | 370 | 1.80e-14 | 72.4 |
| MS.gene82984.t1 | MTR_1g019520 | 30.189 | 212 | 97 | 6 | 70 | 230 | 6 | 217 | 2.34e-14 | 70.1 |
| MS.gene82984.t1 | MTR_7g047030 | 29.775 | 178 | 112 | 5 | 1 | 171 | 196 | 367 | 2.38e-14 | 72.0 |
| MS.gene82984.t1 | MTR_7g047270 | 29.775 | 178 | 112 | 5 | 1 | 171 | 196 | 367 | 2.38e-14 | 72.0 |
| MS.gene82984.t1 | MTR_6g038240 | 29.811 | 265 | 115 | 11 | 13 | 224 | 207 | 453 | 2.98e-14 | 71.6 |
| MS.gene82984.t1 | MTR_8g090095 | 28.986 | 207 | 110 | 10 | 5 | 181 | 192 | 391 | 3.20e-14 | 71.6 |
| MS.gene82984.t1 | MTR_1g029540 | 34.091 | 132 | 83 | 3 | 42 | 171 | 230 | 359 | 4.35e-14 | 71.2 |
| MS.gene82984.t1 | MTR_6g052375 | 34.615 | 156 | 81 | 5 | 4 | 154 | 58 | 197 | 4.59e-14 | 70.5 |
| MS.gene82984.t1 | MTR_6g013990 | 25.185 | 270 | 143 | 8 | 1 | 223 | 218 | 475 | 4.63e-14 | 71.2 |
| MS.gene82984.t1 | MTR_8g009063 | 27.174 | 276 | 143 | 7 | 6 | 229 | 208 | 477 | 4.95e-14 | 70.9 |
| MS.gene82984.t1 | MTR_8g083280 | 29.762 | 168 | 95 | 7 | 13 | 177 | 221 | 368 | 6.62e-14 | 70.5 |
| MS.gene82984.t1 | MTR_6g014040 | 27.907 | 172 | 105 | 4 | 7 | 171 | 227 | 386 | 6.85e-14 | 70.5 |
| MS.gene82984.t1 | MTR_8g009067 | 29.609 | 179 | 112 | 5 | 7 | 177 | 84 | 256 | 7.20e-14 | 70.1 |
| MS.gene82984.t1 | MTR_8g009067 | 29.609 | 179 | 112 | 5 | 7 | 177 | 202 | 374 | 7.78e-14 | 70.5 |
| MS.gene82984.t1 | MTR_8g008970 | 31.818 | 176 | 106 | 6 | 10 | 177 | 205 | 374 | 8.41e-14 | 70.5 |
| MS.gene82984.t1 | MTR_8g012745 | 30.208 | 192 | 105 | 7 | 3 | 177 | 200 | 379 | 8.59e-14 | 70.5 |
| MS.gene82984.t1 | MTR_7g070870 | 36.242 | 149 | 81 | 6 | 9 | 155 | 219 | 355 | 9.10e-14 | 70.1 |
| MS.gene82984.t1 | MTR_8g006230 | 38.679 | 106 | 52 | 3 | 12 | 114 | 150 | 245 | 9.59e-14 | 69.3 |
| MS.gene82984.t1 | MTR_5g035580 | 33.146 | 178 | 87 | 7 | 6 | 171 | 198 | 355 | 9.96e-14 | 70.1 |
| MS.gene82984.t1 | MTR_8g012730 | 29.570 | 186 | 92 | 5 | 4 | 177 | 60 | 218 | 1.22e-13 | 69.3 |
| MS.gene82984.t1 | MTR_5g035560 | 33.708 | 178 | 86 | 8 | 6 | 171 | 196 | 353 | 1.42e-13 | 69.7 |
| MS.gene82984.t1 | MTR_7g070800 | 34.228 | 149 | 83 | 6 | 12 | 155 | 212 | 350 | 1.54e-13 | 69.7 |
| MS.gene82984.t1 | MTR_5g031830 | 32.597 | 181 | 97 | 7 | 9 | 177 | 218 | 385 | 1.93e-13 | 69.3 |
| MS.gene82984.t1 | MTR_4g008630 | 32.727 | 165 | 97 | 6 | 12 | 171 | 207 | 362 | 2.04e-13 | 69.3 |
| MS.gene82984.t1 | MTR_5g075440 | 29.143 | 175 | 102 | 7 | 7 | 177 | 205 | 361 | 3.15e-13 | 68.6 |
| MS.gene82984.t1 | MTR_4g485590 | 39.683 | 126 | 66 | 5 | 58 | 180 | 237 | 355 | 3.38e-13 | 68.6 |
| MS.gene82984.t1 | MTR_8g012630 | 35.537 | 121 | 66 | 4 | 69 | 177 | 205 | 325 | 4.59e-13 | 68.2 |
| MS.gene82984.t1 | MTR_6g014220 | 26.515 | 264 | 134 | 8 | 9 | 224 | 225 | 476 | 4.75e-13 | 68.2 |
| MS.gene82984.t1 | MTR_7g046490 | 33.702 | 181 | 101 | 7 | 10 | 180 | 205 | 376 | 4.81e-13 | 68.2 |
| MS.gene82984.t1 | MTR_3g084520 | 31.977 | 172 | 95 | 8 | 13 | 171 | 211 | 373 | 5.89e-13 | 67.8 |
| MS.gene82984.t1 | MTR_5g072830 | 29.341 | 167 | 95 | 5 | 7 | 171 | 199 | 344 | 6.09e-13 | 67.8 |
| MS.gene82984.t1 | MTR_5g072860 | 28.409 | 176 | 103 | 6 | 1 | 173 | 210 | 365 | 6.30e-13 | 67.8 |
| MS.gene82984.t1 | MTR_7g070810 | 34.932 | 146 | 81 | 5 | 12 | 155 | 215 | 348 | 8.11e-13 | 67.4 |
| MS.gene82984.t1 | MTR_2g059240 | 28.902 | 173 | 103 | 5 | 12 | 177 | 221 | 380 | 8.59e-13 | 67.4 |
| MS.gene82984.t1 | MTR_8g466240 | 28.352 | 261 | 129 | 10 | 12 | 224 | 202 | 452 | 8.81e-13 | 67.4 |
| MS.gene82984.t1 | MTR_7g011470 | 26.519 | 181 | 112 | 5 | 6 | 177 | 207 | 375 | 1.12e-12 | 67.0 |
| MS.gene82984.t1 | MTR_7g011470 | 26.519 | 181 | 112 | 5 | 6 | 177 | 211 | 379 | 1.13e-12 | 67.0 |
| MS.gene82984.t1 | MTR_3g069710 | 29.240 | 171 | 111 | 3 | 9 | 177 | 203 | 365 | 1.14e-12 | 67.0 |
| MS.gene82984.t1 | MTR_7g070660 | 27.273 | 275 | 131 | 8 | 12 | 227 | 217 | 481 | 1.25e-12 | 67.0 |
| MS.gene82984.t1 | MTR_4g031800 | 26.545 | 275 | 129 | 9 | 11 | 222 | 205 | 469 | 1.28e-12 | 67.0 |
| MS.gene82984.t1 | MTR_3g479490 | 26.667 | 270 | 138 | 10 | 2 | 222 | 212 | 470 | 1.47e-12 | 66.6 |
| MS.gene82984.t1 | MTR_8g064870 | 29.282 | 181 | 109 | 5 | 1 | 172 | 204 | 374 | 1.61e-12 | 66.6 |
| MS.gene82984.t1 | MTR_7g070940 | 34.667 | 150 | 83 | 5 | 8 | 155 | 211 | 347 | 1.82e-12 | 66.2 |
| MS.gene82984.t1 | MTR_3g479520 | 25.000 | 268 | 147 | 10 | 3 | 224 | 222 | 481 | 1.86e-12 | 66.2 |
| MS.gene82984.t1 | MTR_3g031400 | 31.818 | 110 | 71 | 1 | 7 | 116 | 202 | 307 | 1.86e-12 | 66.2 |
| MS.gene82984.t1 | MTR_5g090690 | 28.767 | 146 | 94 | 5 | 33 | 171 | 158 | 300 | 1.97e-12 | 66.2 |
| MS.gene82984.t1 | MTR_3g079480 | 25.185 | 270 | 144 | 9 | 3 | 224 | 228 | 487 | 2.23e-12 | 66.2 |
| MS.gene82984.t1 | MTR_3g479610 | 25.556 | 270 | 143 | 9 | 3 | 224 | 52 | 311 | 2.73e-12 | 65.5 |
| MS.gene82984.t1 | MTR_0184s0030 | 29.412 | 204 | 118 | 8 | 12 | 203 | 210 | 399 | 3.41e-12 | 65.5 |
| MS.gene82984.t1 | MTR_7g070860 | 28.516 | 256 | 139 | 8 | 12 | 227 | 213 | 464 | 3.45e-12 | 65.5 |
| MS.gene82984.t1 | MTR_5g072850 | 27.976 | 168 | 99 | 6 | 7 | 173 | 154 | 300 | 3.81e-12 | 65.5 |
| MS.gene82984.t1 | MTR_5g040030 | 26.978 | 278 | 132 | 8 | 12 | 227 | 221 | 489 | 4.72e-12 | 65.1 |
| MS.gene82984.t1 | MTR_6g014290 | 25.806 | 186 | 118 | 4 | 1 | 177 | 217 | 391 | 5.39e-12 | 65.1 |
| MS.gene82984.t1 | MTR_0891s0010 | 24.074 | 270 | 149 | 10 | 1 | 223 | 27 | 287 | 5.89e-12 | 64.3 |
| MS.gene82984.t1 | MTR_6g038300 | 32.749 | 171 | 83 | 7 | 13 | 171 | 207 | 357 | 6.05e-12 | 64.7 |
| MS.gene82984.t1 | MTR_5g016660 | 28.509 | 228 | 101 | 7 | 56 | 227 | 264 | 485 | 7.77e-12 | 64.7 |
| MS.gene82984.t1 | MTR_0078s0060 | 31.176 | 170 | 101 | 7 | 10 | 171 | 205 | 366 | 8.21e-12 | 64.3 |
| MS.gene82984.t1 | MTR_8g068330 | 33.099 | 142 | 78 | 4 | 67 | 207 | 265 | 390 | 8.25e-12 | 64.3 |
| MS.gene82984.t1 | MTR_8g059425 | 24.706 | 170 | 109 | 4 | 9 | 171 | 226 | 383 | 1.05e-11 | 64.3 |
| MS.gene82984.t1 | MTR_1g032490 | 30.000 | 180 | 103 | 5 | 1 | 171 | 205 | 370 | 1.14e-11 | 63.9 |
| MS.gene82984.t1 | MTR_3g031450 | 33.333 | 114 | 68 | 3 | 7 | 116 | 200 | 309 | 1.15e-11 | 63.9 |
| MS.gene82984.t1 | MTR_1g107350 | 27.778 | 180 | 107 | 5 | 1 | 171 | 203 | 368 | 1.15e-11 | 63.9 |
| MS.gene82984.t1 | MTR_4g094920 | 32.075 | 159 | 89 | 7 | 33 | 177 | 236 | 389 | 1.15e-11 | 63.9 |
| MS.gene82984.t1 | MTR_8g006260 | 27.513 | 189 | 117 | 7 | 1 | 177 | 199 | 379 | 1.31e-11 | 63.9 |
| MS.gene82984.t1 | MTR_5g072810 | 28.090 | 178 | 103 | 6 | 7 | 180 | 204 | 360 | 1.56e-11 | 63.5 |
| MS.gene82984.t1 | MTR_1g062380 | 31.953 | 169 | 101 | 6 | 9 | 171 | 222 | 382 | 1.75e-11 | 63.5 |
| MS.gene82984.t1 | MTR_2g008210 | 29.070 | 172 | 104 | 4 | 8 | 171 | 220 | 381 | 1.84e-11 | 63.5 |
| MS.gene82984.t1 | MTR_0009s0240 | 38.889 | 144 | 73 | 8 | 12 | 152 | 211 | 342 | 1.96e-11 | 63.2 |
| MS.gene82984.t1 | MTR_8g056740 | 37.719 | 114 | 62 | 3 | 58 | 170 | 158 | 263 | 2.14e-11 | 63.2 |
| MS.gene82984.t1 | MTR_7g102550 | 28.571 | 280 | 120 | 12 | 11 | 223 | 217 | 483 | 2.34e-11 | 63.2 |
| MS.gene82984.t1 | MTR_6g013920 | 26.404 | 178 | 110 | 5 | 9 | 177 | 227 | 392 | 2.59e-11 | 63.2 |
| MS.gene82984.t1 | MTR_5g058320 | 25.882 | 170 | 107 | 4 | 9 | 171 | 213 | 370 | 2.62e-11 | 63.2 |
| MS.gene82984.t1 | MTR_7g070610 | 32.895 | 152 | 84 | 4 | 12 | 155 | 219 | 360 | 2.67e-11 | 63.2 |
| MS.gene82984.t1 | MTR_6g013450 | 25.843 | 178 | 111 | 5 | 9 | 177 | 229 | 394 | 2.69e-11 | 62.8 |
| MS.gene82984.t1 | MTR_7g080940 | 26.906 | 223 | 121 | 6 | 6 | 191 | 198 | 415 | 2.90e-11 | 62.8 |
| MS.gene82984.t1 | MTR_8g064880 | 27.072 | 181 | 113 | 5 | 1 | 172 | 206 | 376 | 2.98e-11 | 62.8 |
| MS.gene82984.t1 | MTR_7g080935 | 29.885 | 174 | 97 | 5 | 6 | 171 | 198 | 354 | 3.66e-11 | 62.4 |
| MS.gene82984.t1 | MTR_3g008010 | 27.108 | 166 | 103 | 3 | 13 | 171 | 229 | 383 | 3.79e-11 | 62.4 |
| MS.gene82984.t1 | MTR_6g038200 | 35.393 | 178 | 82 | 9 | 6 | 171 | 200 | 356 | 3.84e-11 | 62.4 |
| MS.gene82984.t1 | MTR_8g068360 | 40.909 | 88 | 48 | 2 | 65 | 152 | 266 | 349 | 8.54e-11 | 61.6 |
| MS.gene82984.t1 | MTR_0536s0020 | 34.951 | 103 | 64 | 2 | 70 | 169 | 267 | 369 | 9.03e-11 | 61.2 |
| MS.gene82984.t1 | MTR_6g014186 | 25.991 | 227 | 141 | 8 | 9 | 223 | 225 | 436 | 9.62e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82984.t1 | AT4G15280 | 30.315 | 254 | 130 | 11 | 9 | 232 | 241 | 477 | 5.67e-21 | 91.3 |
| MS.gene82984.t1 | AT4G15280 | 30.315 | 254 | 130 | 11 | 9 | 232 | 209 | 445 | 5.82e-21 | 91.3 |
| MS.gene82984.t1 | AT3G16520 | 28.897 | 263 | 136 | 9 | 7 | 226 | 206 | 460 | 5.87e-21 | 90.9 |
| MS.gene82984.t1 | AT3G16520 | 31.120 | 241 | 132 | 9 | 7 | 224 | 206 | 435 | 9.56e-21 | 90.5 |
| MS.gene82984.t1 | AT3G16520 | 33.333 | 174 | 106 | 6 | 7 | 177 | 206 | 372 | 1.10e-20 | 90.1 |
| MS.gene82984.t1 | AT3G21790 | 27.437 | 277 | 138 | 9 | 9 | 229 | 213 | 482 | 1.43e-20 | 90.1 |
| MS.gene82984.t1 | AT4G01070 | 35.795 | 176 | 98 | 7 | 11 | 177 | 208 | 377 | 4.38e-20 | 88.6 |
| MS.gene82984.t1 | AT3G21800 | 36.242 | 149 | 83 | 5 | 9 | 152 | 209 | 350 | 1.39e-19 | 87.0 |
| MS.gene82984.t1 | AT3G21750 | 26.812 | 276 | 139 | 8 | 11 | 229 | 203 | 472 | 1.56e-19 | 87.0 |
| MS.gene82984.t1 | AT1G07250 | 26.394 | 269 | 142 | 8 | 1 | 222 | 210 | 469 | 3.50e-19 | 85.9 |
| MS.gene82984.t1 | AT1G78270 | 33.898 | 177 | 91 | 6 | 7 | 171 | 223 | 385 | 3.55e-19 | 85.9 |
| MS.gene82984.t1 | AT1G01390 | 34.091 | 176 | 101 | 6 | 11 | 177 | 208 | 377 | 6.19e-19 | 85.5 |
| MS.gene82984.t1 | AT1G01390 | 34.091 | 176 | 101 | 6 | 11 | 177 | 225 | 394 | 6.93e-19 | 85.1 |
| MS.gene82984.t1 | AT4G15260 | 31.579 | 171 | 103 | 6 | 6 | 171 | 88 | 249 | 9.65e-19 | 84.0 |
| MS.gene82984.t1 | AT1G07260 | 25.097 | 259 | 139 | 8 | 11 | 222 | 218 | 468 | 1.32e-18 | 84.3 |
| MS.gene82984.t1 | AT3G21560 | 27.941 | 272 | 126 | 10 | 7 | 224 | 216 | 471 | 2.20e-18 | 84.0 |
| MS.gene82984.t1 | AT1G01420 | 31.638 | 177 | 104 | 6 | 11 | 177 | 208 | 377 | 3.85e-17 | 80.1 |
| MS.gene82984.t1 | AT1G01420 | 31.638 | 177 | 104 | 6 | 11 | 177 | 211 | 380 | 4.29e-17 | 80.1 |
| MS.gene82984.t1 | AT2G36970 | 30.189 | 159 | 97 | 2 | 13 | 171 | 230 | 374 | 7.68e-17 | 79.3 |
| MS.gene82984.t1 | AT4G36770 | 33.702 | 181 | 96 | 6 | 12 | 177 | 203 | 374 | 1.39e-16 | 78.6 |
| MS.gene82984.t1 | AT4G01070 | 43.269 | 104 | 53 | 2 | 11 | 114 | 208 | 305 | 1.49e-16 | 77.8 |
| MS.gene82984.t1 | AT2G29740 | 26.154 | 260 | 133 | 9 | 11 | 222 | 223 | 471 | 1.87e-16 | 78.2 |
| MS.gene82984.t1 | AT3G21780 | 25.806 | 279 | 135 | 10 | 11 | 229 | 206 | 472 | 2.53e-16 | 77.8 |
| MS.gene82984.t1 | AT2G43840 | 27.652 | 264 | 138 | 9 | 6 | 224 | 190 | 445 | 7.10e-16 | 76.3 |
| MS.gene82984.t1 | AT2G43840 | 27.652 | 264 | 138 | 9 | 6 | 224 | 190 | 445 | 7.31e-16 | 76.3 |
| MS.gene82984.t1 | AT3G21760 | 25.725 | 276 | 143 | 9 | 11 | 230 | 216 | 485 | 7.98e-16 | 76.3 |
| MS.gene82984.t1 | AT1G73880 | 32.544 | 169 | 102 | 6 | 12 | 177 | 219 | 378 | 2.09e-15 | 75.1 |
| MS.gene82984.t1 | AT2G29730 | 27.237 | 257 | 140 | 8 | 7 | 222 | 209 | 459 | 5.82e-15 | 73.9 |
| MS.gene82984.t1 | AT2G31790 | 32.584 | 178 | 91 | 7 | 6 | 171 | 198 | 358 | 6.31e-15 | 73.6 |
| MS.gene82984.t1 | AT5G66690 | 29.348 | 184 | 108 | 5 | 9 | 177 | 200 | 376 | 1.85e-14 | 72.4 |
| MS.gene82984.t1 | AT2G28080 | 30.252 | 119 | 77 | 1 | 6 | 124 | 223 | 335 | 2.24e-14 | 72.0 |
| MS.gene82984.t1 | AT5G03490 | 36.875 | 160 | 76 | 7 | 6 | 160 | 217 | 356 | 2.55e-14 | 72.0 |
| MS.gene82984.t1 | AT1G07240 | 23.881 | 268 | 144 | 8 | 7 | 223 | 215 | 473 | 2.57e-14 | 72.0 |
| MS.gene82984.t1 | AT1G05560 | 36.190 | 105 | 59 | 2 | 13 | 116 | 200 | 297 | 3.74e-14 | 71.2 |
| MS.gene82984.t1 | AT1G05560 | 36.190 | 105 | 59 | 2 | 13 | 116 | 250 | 347 | 4.41e-14 | 71.2 |
| MS.gene82984.t1 | AT4G15480 | 29.534 | 193 | 113 | 6 | 6 | 184 | 220 | 403 | 5.48e-14 | 70.9 |
| MS.gene82984.t1 | AT2G31750 | 30.286 | 175 | 96 | 6 | 6 | 171 | 197 | 354 | 9.91e-14 | 70.1 |
| MS.gene82984.t1 | AT2G31750 | 30.286 | 175 | 96 | 6 | 6 | 171 | 197 | 354 | 1.58e-13 | 69.7 |
| MS.gene82984.t1 | AT1G05530 | 38.532 | 109 | 56 | 3 | 13 | 117 | 200 | 301 | 1.73e-13 | 69.3 |
| MS.gene82984.t1 | AT2G18570 | 31.844 | 179 | 103 | 7 | 12 | 180 | 207 | 376 | 2.93e-13 | 68.9 |
| MS.gene82984.t1 | AT1G10400 | 35.762 | 151 | 76 | 6 | 6 | 153 | 212 | 344 | 3.37e-13 | 68.6 |
| MS.gene82984.t1 | AT5G12890 | 27.074 | 229 | 149 | 8 | 5 | 226 | 218 | 435 | 3.71e-13 | 68.6 |
| MS.gene82984.t1 | AT4G34135 | 35.329 | 167 | 90 | 7 | 9 | 169 | 221 | 375 | 5.33e-13 | 68.2 |
| MS.gene82984.t1 | AT2G29710 | 33.333 | 141 | 81 | 4 | 7 | 146 | 208 | 336 | 6.51e-13 | 67.8 |
| MS.gene82984.t1 | AT5G26310 | 27.222 | 180 | 103 | 6 | 9 | 171 | 200 | 368 | 1.36e-12 | 67.0 |
| MS.gene82984.t1 | AT2G30140 | 35.185 | 108 | 63 | 2 | 7 | 114 | 205 | 305 | 1.76e-12 | 66.6 |
| MS.gene82984.t1 | AT2G30140 | 35.185 | 108 | 63 | 2 | 7 | 114 | 206 | 306 | 1.76e-12 | 66.6 |
| MS.gene82984.t1 | AT2G16890 | 29.221 | 154 | 89 | 4 | 1 | 152 | 210 | 345 | 1.94e-12 | 66.2 |
| MS.gene82984.t1 | AT3G53160 | 32.143 | 168 | 91 | 7 | 12 | 169 | 217 | 371 | 2.02e-12 | 66.2 |
| MS.gene82984.t1 | AT2G43820 | 26.374 | 273 | 130 | 9 | 6 | 224 | 190 | 445 | 2.40e-12 | 66.2 |
| MS.gene82984.t1 | AT2G36780 | 34.459 | 148 | 85 | 5 | 12 | 155 | 223 | 362 | 2.96e-12 | 65.9 |
| MS.gene82984.t1 | AT1G06000 | 30.952 | 168 | 109 | 5 | 8 | 171 | 173 | 337 | 2.98e-12 | 65.9 |
| MS.gene82984.t1 | AT2G15490 | 45.556 | 90 | 41 | 2 | 69 | 155 | 277 | 361 | 3.25e-12 | 65.9 |
| MS.gene82984.t1 | AT2G16890 | 29.299 | 157 | 85 | 5 | 1 | 152 | 210 | 345 | 3.38e-12 | 65.5 |
| MS.gene82984.t1 | AT3G50740 | 26.519 | 181 | 111 | 5 | 12 | 177 | 208 | 381 | 4.36e-12 | 65.5 |
| MS.gene82984.t1 | AT1G22400 | 28.736 | 174 | 99 | 5 | 9 | 171 | 227 | 386 | 7.12e-12 | 64.7 |
| MS.gene82984.t1 | AT4G15550 | 29.586 | 169 | 100 | 6 | 13 | 177 | 227 | 380 | 1.14e-11 | 63.9 |
| MS.gene82984.t1 | AT4G34138 | 33.939 | 165 | 91 | 7 | 12 | 169 | 223 | 376 | 1.21e-11 | 63.9 |
| MS.gene82984.t1 | AT2G18560 | 35.526 | 152 | 74 | 6 | 12 | 152 | 117 | 255 | 1.22e-11 | 63.9 |
| MS.gene82984.t1 | AT2G36760 | 34.228 | 149 | 84 | 5 | 12 | 155 | 223 | 362 | 1.26e-11 | 63.9 |
| MS.gene82984.t1 | AT5G14860 | 33.557 | 149 | 74 | 6 | 9 | 152 | 225 | 353 | 1.46e-11 | 63.9 |
| MS.gene82984.t1 | AT4G34131 | 34.641 | 153 | 82 | 5 | 9 | 155 | 220 | 360 | 2.24e-11 | 63.2 |
| MS.gene82984.t1 | AT2G15490 | 43.678 | 87 | 44 | 1 | 69 | 155 | 277 | 358 | 2.24e-11 | 63.2 |
| MS.gene82984.t1 | AT2G36770 | 31.757 | 148 | 89 | 4 | 12 | 155 | 223 | 362 | 2.45e-11 | 63.2 |
| MS.gene82984.t1 | AT3G55710 | 34.722 | 144 | 83 | 4 | 11 | 152 | 206 | 340 | 3.76e-11 | 62.4 |
| MS.gene82984.t1 | AT1G22360 | 26.590 | 173 | 104 | 4 | 9 | 171 | 223 | 382 | 3.97e-11 | 62.4 |
| MS.gene82984.t1 | AT1G22360 | 26.590 | 173 | 104 | 4 | 9 | 171 | 223 | 382 | 4.19e-11 | 62.4 |
| MS.gene82984.t1 | AT3G46680 | 29.944 | 177 | 105 | 7 | 6 | 177 | 201 | 363 | 5.69e-11 | 62.0 |
| MS.gene82984.t1 | AT1G51210 | 32.394 | 142 | 77 | 6 | 12 | 152 | 217 | 340 | 9.00e-11 | 61.2 |
Find 62 sgRNAs with CRISPR-Local
Find 87 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGAAGAAGAGTTGGGGTT+GGG | 0.247645 | 4.2:+26911989 | MS.gene82984:CDS |
| TGGAAGAAGAGTTGGGGTTG+GGG | 0.281536 | 4.2:+26911990 | MS.gene82984:CDS |
| GACAAAGAAGATAAAGAAGT+TGG | 0.363291 | 4.2:+26911726 | MS.gene82984:CDS |
| TCACTACAAGCTCTTAATAA+TGG | 0.365837 | 4.2:+26911444 | MS.gene82984:CDS |
| GGATTGAAGGCTATTAGCTT+TGG | 0.385709 | 4.2:+26912113 | MS.gene82984:CDS |
| GGAAAAGGGGTTGGTAGTTA+AGG | 0.387433 | 4.2:+26911791 | MS.gene82984:CDS |
| TGGTTGAGATTAGTGGATGG+GGG | 0.395542 | 4.2:+26911964 | MS.gene82984:CDS |
| ATAGAGAGAATGAAGGAAAA+GGG | 0.399765 | 4.2:+26911777 | MS.gene82984:CDS |
| TGGCTTGATGAACAACCTAT+TGG | 0.406957 | 4.2:+26911579 | MS.gene82984:CDS |
| CTTTGGAAGCAGAACTGCAT+TGG | 0.407877 | 4.2:+26911620 | MS.gene82984:CDS |
| TTGGTTGAGATTAGTGGATG+GGG | 0.409625 | 4.2:+26911963 | MS.gene82984:CDS |
| GATAGAGAGAATGAAGGAAA+AGG | 0.410876 | 4.2:+26911776 | MS.gene82984:CDS |
| GCAGGGTTGGTTGAGATTAG+TGG | 0.415678 | 4.2:+26911957 | MS.gene82984:intron |
| AACAATGTCAACAATGTTTG+AGG | 0.419238 | 4.2:+26912182 | MS.gene82984:CDS |
| TCTGTGGTTTATGTTTGCTT+TGG | 0.428458 | 4.2:+26911603 | MS.gene82984:CDS |
| TTGAAGGCTATTAGCTTTGG+TGG | 0.438295 | 4.2:+26912116 | MS.gene82984:CDS |
| TTCAGAAGCTTATTCAAAAG+TGG | 0.442852 | 4.2:+26912156 | MS.gene82984:CDS |
| ATGCCTCCTGTTTATGCTGT+TGG | 0.449706 | 4.2:+26911483 | MS.gene82984:CDS |
| AGGGAACAAATGAGAGAGAT+TGG | 0.451019 | 4.2:+26911645 | MS.gene82984:CDS |
| ACAAAGAAGATAAAGAAGTT+GGG | 0.463869 | 4.2:+26911727 | MS.gene82984:CDS |
| GTTGGTTGAGATTAGTGGAT+GGG | 0.468800 | 4.2:+26911962 | MS.gene82984:CDS |
| AAAGCAATAGAGCTTAAAGA+TGG | 0.469089 | 4.2:+26912089 | MS.gene82984:CDS |
| TTTGGAAGAAGAGTTGGGGT+TGG | 0.469735 | 4.2:+26911988 | MS.gene82984:CDS |
| AATGGACCAACAGCATAAAC+AGG | 0.476194 | 4.2:-26911489 | None:intergenic |
| ACATAAACCACAGATCCAAT+AGG | 0.477759 | 4.2:-26911594 | None:intergenic |
| TCATCAAGCCACTTGGTCAA+TGG | 0.481759 | 4.2:-26911567 | None:intergenic |
| TCGAACTCAAGAGGAACAAA+TGG | 0.483099 | 4.2:-26911507 | None:intergenic |
| TTTGGAAGCAGAACTGCATT+GGG | 0.485774 | 4.2:+26911621 | MS.gene82984:CDS |
| CTTTCTTTCTCGAACTCAAG+AGG | 0.500599 | 4.2:-26911516 | None:intergenic |
| GTTGTGAAAGGAGAAGAAAT+TGG | 0.507252 | 4.2:+26912023 | MS.gene82984:CDS |
| AGATGCTATAAAAGAGATGA+TGG | 0.511450 | 4.2:+26912046 | MS.gene82984:CDS |
| TGAGTTGATAGAGAGAATGA+AGG | 0.513464 | 4.2:+26911770 | MS.gene82984:CDS |
| GAGAATGAAGGAAAAGGGGT+TGG | 0.518040 | 4.2:+26911782 | MS.gene82984:CDS |
| ATGAGATTCAAGTGCTTCAA+AGG | 0.523394 | 4.2:-26911421 | None:intergenic |
| GGGGTTGGTAGTTAAGGAAT+GGG | 0.527757 | 4.2:+26911797 | MS.gene82984:CDS |
| AGGGGTTGGTAGTTAAGGAA+TGG | 0.531268 | 4.2:+26911796 | MS.gene82984:CDS |
| AAGAAGAGTTGGGGTTGGGG+TGG | 0.532038 | 4.2:+26911993 | MS.gene82984:CDS |
| GTTCGAGAAAGAAAGTCAAA+AGG | 0.536561 | 4.2:+26911524 | MS.gene82984:CDS |
| GGTTGAGATTAGTGGATGGG+GGG | 0.544391 | 4.2:+26911965 | MS.gene82984:CDS |
| GGGGTTTGGAAGAAGAGTTG+GGG | 0.551448 | 4.2:+26911984 | MS.gene82984:CDS |
| GGTTGGTTGAGATTAGTGGA+TGG | 0.558285 | 4.2:+26911961 | MS.gene82984:CDS |
| GAAGCAGAACTGCATTGGGA+AGG | 0.558651 | 4.2:+26911625 | MS.gene82984:CDS |
| AAGCAATAGAGCTTAAAGAT+GGG | 0.558663 | 4.2:+26912090 | MS.gene82984:CDS |
| TAGAGAGAATGAAGGAAAAG+GGG | 0.568537 | 4.2:+26911778 | MS.gene82984:CDS |
| TAGCTTTGGTGGAGATTGTG+AGG | 0.577136 | 4.2:+26912127 | MS.gene82984:CDS |
| AAGCAGAACTGCATTGGGAA+GGG | 0.585301 | 4.2:+26911626 | MS.gene82984:CDS |
| CAAATGAGAGAGATTGGTGA+CGG | 0.588949 | 4.2:+26911651 | MS.gene82984:CDS |
| AGCAATAGAGCTTAAAGATG+GGG | 0.591164 | 4.2:+26912091 | MS.gene82984:CDS |
| AATAATGGAGAAGTTGTCAA+AGG | 0.592698 | 4.2:+26911459 | MS.gene82984:CDS |
| AAATGAGAGAGATTGGTGAC+GGG | 0.593164 | 4.2:+26911652 | MS.gene82984:CDS |
| TAAAGAAGTTGGGTTAGACG+AGG | 0.602044 | 4.2:+26911737 | MS.gene82984:CDS |
| CAAGTGCTTCAAAGGTGTTG+AGG | 0.603614 | 4.2:-26911413 | None:intergenic |
| CCTAACCTAACAAAACTACA+AGG | 0.607170 | 4.2:+26911384 | MS.gene82984:CDS |
| TCAAGCCACTTGGTCAATGG+TGG | 0.613435 | 4.2:-26911564 | None:intergenic |
| GGTGGTGAACGTGTTGTGAA+AGG | 0.613457 | 4.2:+26912011 | MS.gene82984:CDS |
| AGGTTGTTCATCAAGCCACT+TGG | 0.616400 | 4.2:-26911574 | None:intergenic |
| TGAACAACCTATTGGATCTG+TGG | 0.621955 | 4.2:+26911587 | MS.gene82984:CDS |
| AATCACCACCATTGACCAAG+TGG | 0.629362 | 4.2:+26911559 | MS.gene82984:CDS |
| GTTGGTAGTTAAGGAATGGG+TGG | 0.638177 | 4.2:+26911800 | MS.gene82984:CDS |
| GGTGACGGGTTGATGAGAAG+TGG | 0.639284 | 4.2:+26911666 | MS.gene82984:CDS |
| GCAATAGAGCTTAAAGATGG+GGG | 0.641146 | 4.2:+26912092 | MS.gene82984:CDS |
| GGACCAACAGCATAAACAGG+AGG | 0.700115 | 4.2:-26911486 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | ACAAAGAAGATAAAGAAGTT+GGG | + | chr4.2:26911727-26911746 | MS.gene82984:CDS | 25.0% |
| !!! | AAGTGGATACAATTTTTTGT+GGG | + | chr4.2:26911683-26911702 | MS.gene82984:CDS | 25.0% |
| AAAGCAATAGAGCTTAAAGA+TGG | + | chr4.2:26912089-26912108 | MS.gene82984:CDS | 30.0% | |
| AAGCAATAGAGCTTAAAGAT+GGG | + | chr4.2:26912090-26912109 | MS.gene82984:CDS | 30.0% | |
| AGATGCTATAAAAGAGATGA+TGG | + | chr4.2:26912046-26912065 | MS.gene82984:CDS | 30.0% | |
| ATAGAGAGAATGAAGGAAAA+GGG | + | chr4.2:26911777-26911796 | MS.gene82984:CDS | 30.0% | |
| GACAAAGAAGATAAAGAAGT+TGG | + | chr4.2:26911726-26911745 | MS.gene82984:CDS | 30.0% | |
| TCACTACAAGCTCTTAATAA+TGG | + | chr4.2:26911444-26911463 | MS.gene82984:CDS | 30.0% | |
| TTCAGAAGCTTATTCAAAAG+TGG | + | chr4.2:26912156-26912175 | MS.gene82984:CDS | 30.0% | |
| ! | AATAATGGAGAAGTTGTCAA+AGG | + | chr4.2:26911459-26911478 | MS.gene82984:CDS | 30.0% |
| ! | ATTCTTAGTCACAAAAGTGT+AGG | + | chr4.2:26911834-26911853 | MS.gene82984:intron | 30.0% |
| !!! | AAACACCTTGTAGTTTTGTT+AGG | - | chr4.2:26911392-26911411 | None:intergenic | 30.0% |
| !!! | CAATTTTTTGTGGGTTGTTA+AGG | + | chr4.2:26911692-26911711 | MS.gene82984:CDS | 30.0% |
| !!! | GAAGTGGATACAATTTTTTG+TGG | + | chr4.2:26911682-26911701 | MS.gene82984:CDS | 30.0% |
| ACATAAACCACAGATCCAAT+AGG | - | chr4.2:26911597-26911616 | None:intergenic | 35.0% | |
| AGCAATAGAGCTTAAAGATG+GGG | + | chr4.2:26912091-26912110 | MS.gene82984:CDS | 35.0% | |
| ATGAGATTCAAGTGCTTCAA+AGG | - | chr4.2:26911424-26911443 | None:intergenic | 35.0% | |
| CCTAACCTAACAAAACTACA+AGG | + | chr4.2:26911384-26911403 | MS.gene82984:CDS | 35.0% | |
| GATAGAGAGAATGAAGGAAA+AGG | + | chr4.2:26911776-26911795 | MS.gene82984:CDS | 35.0% | |
| GTTCGAGAAAGAAAGTCAAA+AGG | + | chr4.2:26911524-26911543 | MS.gene82984:CDS | 35.0% | |
| GTTGTGAAAGGAGAAGAAAT+TGG | + | chr4.2:26912023-26912042 | MS.gene82984:CDS | 35.0% | |
| TAGAGAGAATGAAGGAAAAG+GGG | + | chr4.2:26911778-26911797 | MS.gene82984:CDS | 35.0% | |
| TCTGTGGTTTATGTTTGCTT+TGG | + | chr4.2:26911603-26911622 | MS.gene82984:CDS | 35.0% | |
| TTGTGGATGGAACTCAATTA+TGG | + | chr4.2:26911872-26911891 | MS.gene82984:intron | 35.0% | |
| TTTGAATGGTGTGCCAATAT+TGG | + | chr4.2:26911902-26911921 | MS.gene82984:intron | 35.0% | |
| !! | TGAGTTGATAGAGAGAATGA+AGG | + | chr4.2:26911770-26911789 | MS.gene82984:CDS | 35.0% |
| !!! | CCTTGTAGTTTTGTTAGGTT+AGG | - | chr4.2:26911387-26911406 | None:intergenic | 35.0% |
| AATGGACCAACAGCATAAAC+AGG | - | chr4.2:26911492-26911511 | None:intergenic | 40.0% | |
| AGGGAACAAATGAGAGAGAT+TGG | + | chr4.2:26911645-26911664 | MS.gene82984:CDS | 40.0% | |
| CAAATGAGAGAGATTGGTGA+CGG | + | chr4.2:26911651-26911670 | MS.gene82984:CDS | 40.0% | |
| CTTTCTTTCTCGAACTCAAG+AGG | - | chr4.2:26911519-26911538 | None:intergenic | 40.0% | |
| GATTTGTGAGTCATTGTGGA+TGG | + | chr4.2:26911859-26911878 | MS.gene82984:intron | 40.0% | |
| GCAATAGAGCTTAAAGATGG+GGG | + | chr4.2:26912092-26912111 | MS.gene82984:CDS | 40.0% | |
| GTGATCAGAGGATAAATGCA+GGG | + | chr4.2:26911940-26911959 | MS.gene82984:intron | 40.0% | |
| TCGAACTCAAGAGGAACAAA+TGG | - | chr4.2:26911510-26911529 | None:intergenic | 40.0% | |
| TGAACAACCTATTGGATCTG+TGG | + | chr4.2:26911587-26911606 | MS.gene82984:CDS | 40.0% | |
| TGGATGGAACTCAATTATGG+AGG | + | chr4.2:26911875-26911894 | MS.gene82984:intron | 40.0% | |
| TGGCTTGATGAACAACCTAT+TGG | + | chr4.2:26911579-26911598 | MS.gene82984:CDS | 40.0% | |
| TTTGGAAGCAGAACTGCATT+GGG | + | chr4.2:26911621-26911640 | MS.gene82984:CDS | 40.0% | |
| ! | AAATGAGAGAGATTGGTGAC+GGG | + | chr4.2:26911652-26911671 | MS.gene82984:CDS | 40.0% |
| ! | CTTAGTCACAAAAGTGTAGG+AGG | + | chr4.2:26911837-26911856 | MS.gene82984:intron | 40.0% |
| ! | GGATTGAAGGCTATTAGCTT+TGG | + | chr4.2:26912113-26912132 | MS.gene82984:CDS | 40.0% |
| ! | GTTGGTTGAGATTAGTGGAT+GGG | + | chr4.2:26911962-26911981 | MS.gene82984:CDS | 40.0% |
| ! | TAAAGAAGTTGGGTTAGACG+AGG | + | chr4.2:26911737-26911756 | MS.gene82984:CDS | 40.0% |
| ! | TTGGTTGAGATTAGTGGATG+GGG | + | chr4.2:26911963-26911982 | MS.gene82984:CDS | 40.0% |
| !! | ATTATGGAGGCAGCTTTGAA+TGG | + | chr4.2:26911888-26911907 | MS.gene82984:intron | 40.0% |
| !! | TTGAAGGCTATTAGCTTTGG+TGG | + | chr4.2:26912116-26912135 | MS.gene82984:CDS | 40.0% |
| AAGCAGAACTGCATTGGGAA+GGG | + | chr4.2:26911626-26911645 | MS.gene82984:CDS | 45.0% | |
| AATCACCACCATTGACCAAG+TGG | + | chr4.2:26911559-26911578 | MS.gene82984:CDS | 45.0% | |
| AGGTTGTTCATCAAGCCACT+TGG | - | chr4.2:26911577-26911596 | None:intergenic | 45.0% | |
| ATCCTCTGATCACCATGTTG+TGG | - | chr4.2:26911933-26911952 | None:intergenic | 45.0% | |
| ATGCCTCCTGTTTATGCTGT+TGG | + | chr4.2:26911483-26911502 | MS.gene82984:CDS | 45.0% | |
| GAGAATGAAGGAAAAGGGGT+TGG | + | chr4.2:26911782-26911801 | MS.gene82984:CDS | 45.0% | |
| GCTTAAAGATGGGGGATTGA+AGG | + | chr4.2:26912100-26912119 | MS.gene82984:CDS | 45.0% | |
| GGAGGATTTGTGAGTCATTG+TGG | + | chr4.2:26911855-26911874 | MS.gene82984:intron | 45.0% | |
| GGTGATCAGAGGATAAATGC+AGG | + | chr4.2:26911939-26911958 | MS.gene82984:intron | 45.0% | |
| TCAGAGGATAAATGCAGGGT+TGG | + | chr4.2:26911944-26911963 | MS.gene82984:intron | 45.0% | |
| TCATCAAGCCACTTGGTCAA+TGG | - | chr4.2:26911570-26911589 | None:intergenic | 45.0% | |
| TGTTGTGGCCAAGCCAATAT+TGG | - | chr4.2:26911918-26911937 | None:intergenic | 45.0% | |
| TTGGAAGAAGAGTTGGGGTT+GGG | + | chr4.2:26911989-26912008 | MS.gene82984:CDS | 45.0% | |
| TTTGGAAGAAGAGTTGGGGT+TGG | + | chr4.2:26911988-26912007 | MS.gene82984:CDS | 45.0% | |
| ! | ATGGTGTGCCAATATTGGCT+TGG | + | chr4.2:26911907-26911926 | MS.gene82984:intron | 45.0% |
| ! | CTTTGGAAGCAGAACTGCAT+TGG | + | chr4.2:26911620-26911639 | MS.gene82984:CDS | 45.0% |
| ! | GGTTGGTTGAGATTAGTGGA+TGG | + | chr4.2:26911961-26911980 | MS.gene82984:CDS | 45.0% |
| ! | TGGTTGAGATTAGTGGATGG+GGG | + | chr4.2:26911964-26911983 | MS.gene82984:CDS | 45.0% |
| !! | AGGGGTTGGTAGTTAAGGAA+TGG | + | chr4.2:26911796-26911815 | MS.gene82984:CDS | 45.0% |
| !! | ATATTGGCTTGGCCACAACA+TGG | + | chr4.2:26911918-26911937 | MS.gene82984:intron | 45.0% |
| !! | CAAGTGCTTCAAAGGTGTTG+AGG | - | chr4.2:26911416-26911435 | None:intergenic | 45.0% |
| !! | GGAAAAGGGGTTGGTAGTTA+AGG | + | chr4.2:26911791-26911810 | MS.gene82984:CDS | 45.0% |
| !! | GGGGTTGGTAGTTAAGGAAT+GGG | + | chr4.2:26911797-26911816 | MS.gene82984:CDS | 45.0% |
| !! | GTTGGGTTAGACGAGGTTTT+AGG | + | chr4.2:26911744-26911763 | MS.gene82984:CDS | 45.0% |
| !! | GTTGGTAGTTAAGGAATGGG+TGG | + | chr4.2:26911800-26911819 | MS.gene82984:CDS | 45.0% |
| !! | TAGCTTTGGTGGAGATTGTG+AGG | + | chr4.2:26912127-26912146 | MS.gene82984:CDS | 45.0% |
| GAAGCAGAACTGCATTGGGA+AGG | + | chr4.2:26911625-26911644 | MS.gene82984:CDS | 50.0% | |
| GGACCAACAGCATAAACAGG+AGG | - | chr4.2:26911489-26911508 | None:intergenic | 50.0% | |
| GGGGGTTTGGAAGAAGAGTT+GGG | + | chr4.2:26911983-26912002 | MS.gene82984:CDS | 50.0% | |
| GGGGTTTGGAAGAAGAGTTG+GGG | + | chr4.2:26911984-26912003 | MS.gene82984:CDS | 50.0% | |
| GGTGGTGAACGTGTTGTGAA+AGG | + | chr4.2:26912011-26912030 | MS.gene82984:CDS | 50.0% | |
| TCAAGCCACTTGGTCAATGG+TGG | - | chr4.2:26911567-26911586 | None:intergenic | 50.0% | |
| TGGAAGAAGAGTTGGGGTTG+GGG | + | chr4.2:26911990-26912009 | MS.gene82984:CDS | 50.0% | |
| ! | AGATTAGTGGATGGGGGGTT+TGG | + | chr4.2:26911970-26911989 | MS.gene82984:CDS | 50.0% |
| ! | GGTTGAGATTAGTGGATGGG+GGG | + | chr4.2:26911965-26911984 | MS.gene82984:CDS | 50.0% |
| !! | GCAGGGTTGGTTGAGATTAG+TGG | + | chr4.2:26911957-26911976 | MS.gene82984:intron | 50.0% |
| AAGAAGAGTTGGGGTTGGGG+TGG | + | chr4.2:26911993-26912012 | MS.gene82984:CDS | 55.0% | |
| GGCCACAACATGGTGATCAG+AGG | + | chr4.2:26911928-26911947 | MS.gene82984:intron | 55.0% | |
| GGGGGGTTTGGAAGAAGAGT+TGG | + | chr4.2:26911982-26912001 | MS.gene82984:CDS | 55.0% | |
| !! | GGTGACGGGTTGATGAGAAG+TGG | + | chr4.2:26911666-26911685 | MS.gene82984:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 26911372 | 26912202 | 26911372 | ID=MS.gene82984 |
| chr4.2 | mRNA | 26911372 | 26912202 | 26911372 | ID=MS.gene82984.t1;Parent=MS.gene82984 |
| chr4.2 | exon | 26911372 | 26911828 | 26911372 | ID=MS.gene82984.t1.exon1;Parent=MS.gene82984.t1 |
| chr4.2 | CDS | 26911372 | 26911828 | 26911372 | ID=cds.MS.gene82984.t1;Parent=MS.gene82984.t1 |
| chr4.2 | exon | 26911961 | 26912202 | 26911961 | ID=MS.gene82984.t1.exon2;Parent=MS.gene82984.t1 |
| chr4.2 | CDS | 26911961 | 26912202 | 26911961 | ID=cds.MS.gene82984.t1;Parent=MS.gene82984.t1 |
| Gene Sequence |
| Protein sequence |
