Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82988.t1 | RHN41744.1 | 99.2 | 124 | 1 | 0 | 1 | 124 | 81 | 204 | 3.00E-67 | 264.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82988.t1 | P35135 | 93.5 | 124 | 8 | 0 | 1 | 124 | 25 | 148 | 1.7e-66 | 253.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82988.t1 | I3S3T5 | 99.2 | 124 | 1 | 0 | 1 | 124 | 25 | 148 | 2.1e-67 | 264.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049807 | MS.gene82988 | -0.82469 | 7.04E-54 | -1.69E-46 |
| MS.gene049887 | MS.gene82988 | -0.804925 | 1.71E-49 | -1.69E-46 |
| MS.gene050551 | MS.gene82988 | -0.80044 | 1.44E-48 | -1.69E-46 |
| MS.gene050838 | MS.gene82988 | -0.814589 | 1.43E-51 | -1.69E-46 |
| MS.gene051102 | MS.gene82988 | -0.832205 | 1.08E-55 | -1.69E-46 |
| MS.gene052307 | MS.gene82988 | -0.84457 | 6.96E-59 | -1.69E-46 |
| MS.gene052609 | MS.gene82988 | -0.823248 | 1.53E-53 | -1.69E-46 |
| MS.gene053144 | MS.gene82988 | -0.804061 | 2.59E-49 | -1.69E-46 |
| MS.gene054584 | MS.gene82988 | -0.801523 | 8.65E-49 | -1.69E-46 |
| MS.gene055465 | MS.gene82988 | -0.811555 | 6.60E-51 | -1.69E-46 |
| MS.gene055469 | MS.gene82988 | -0.841089 | 5.87E-58 | -1.69E-46 |
| MS.gene056043 | MS.gene82988 | 0.80378 | 2.96E-49 | -1.69E-46 |
| MS.gene056308 | MS.gene82988 | -0.801625 | 8.24E-49 | -1.69E-46 |
| MS.gene056507 | MS.gene82988 | -0.815296 | 9.94E-52 | -1.69E-46 |
| MS.gene056522 | MS.gene82988 | 0.823871 | 1.10E-53 | -1.69E-46 |
| MS.gene059171 | MS.gene82988 | -0.83282 | 7.60E-56 | -1.69E-46 |
| MS.gene061006 | MS.gene82988 | -0.820781 | 5.72E-53 | -1.69E-46 |
| MS.gene061100 | MS.gene82988 | -0.812714 | 3.69E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 55 sgRNAs with CRISPR-Local
Find 123 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGGGCTCCATTGCTCTTTC+AGG | 0.120840 | 8.3:+31506932 | None:intergenic |
| CTACCGTTACTGTTGATATT+AGG | 0.137672 | 8.3:+31506970 | None:intergenic |
| CTTAACCCATGGCATATTTC+TGG | 0.152621 | 8.3:+31506368 | None:intergenic |
| CCATTGGCAAGCTACAATTA+TGG | 0.267578 | 8.3:-31508156 | MS.gene82988:CDS |
| CAGAAATATGCCATGGGTTA+AGG | 0.286801 | 8.3:-31506367 | None:intergenic |
| TTGTACATATGAGCAATTTC+AGG | 0.311190 | 8.3:+31506433 | None:intergenic |
| CCCGCAAATGGGCTATCTCC+TGG | 0.316820 | 8.3:+31508131 | None:intergenic |
| TACCGTTACTGTTGATATTA+GGG | 0.326660 | 8.3:+31506971 | None:intergenic |
| CATTGGCAAGCTACAATTAT+GGG | 0.330983 | 8.3:-31508155 | MS.gene82988:CDS |
| TTAACCCATGGCATATTTCT+GGG | 0.371740 | 8.3:+31506369 | None:intergenic |
| AGAAATATGCCATGGGTTAA+GGG | 0.381920 | 8.3:-31506366 | None:intergenic |
| CCAGGAGATAGCCCATTTGC+GGG | 0.390432 | 8.3:-31508131 | MS.gene82988:CDS |
| AGAAACACACCTCCCGCAAA+TGG | 0.400575 | 8.3:+31508119 | None:intergenic |
| ACCTTGGATATTGTGAGGGC+AGG | 0.405744 | 8.3:+31506913 | None:intergenic |
| TCAGGGACCAGAGGATCATC+TGG | 0.406568 | 8.3:+31506451 | None:intergenic |
| GAATTTGGGTTTACCTTGGG+TGG | 0.439702 | 8.3:+31508059 | None:intergenic |
| ATCAGTCAACAGAGAACAAA+TGG | 0.443192 | 8.3:+31506480 | None:intergenic |
| CCCAGGAGATAGCCCATTTG+CGG | 0.455352 | 8.3:-31508132 | MS.gene82988:CDS |
| CCGCAAATGGGCTATCTCCT+GGG | 0.465958 | 8.3:+31508132 | None:intergenic |
| TCCCAACCCAGATGATCCTC+TGG | 0.480906 | 8.3:-31506458 | MS.gene82988:CDS |
| ACCAGAGGATCATCTGGGTT+GGG | 0.483549 | 8.3:+31506457 | None:intergenic |
| TTTACCTTGGGTGGTTTGAA+AGG | 0.493166 | 8.3:+31508068 | None:intergenic |
| TGTACATATGAGCAATTTCA+GGG | 0.503724 | 8.3:+31506434 | None:intergenic |
| ATGAGGCCACTGCTCGGTCA+TGG | 0.505125 | 8.3:-31506393 | MS.gene82988:CDS |
| GAAACACACCTCCCGCAAAT+GGG | 0.512424 | 8.3:+31508120 | None:intergenic |
| TGTGCAAATTCACTTCCCTC+CGG | 0.514742 | 8.3:-31508096 | MS.gene82988:CDS |
| GGTGGTTTGAAAGGATAATC+CGG | 0.519248 | 8.3:+31508077 | None:intergenic |
| GACCAGAGGATCATCTGGGT+TGG | 0.531915 | 8.3:+31506456 | None:intergenic |
| CCTTGGATATTGTGAGGGCA+GGG | 0.540091 | 8.3:+31506914 | None:intergenic |
| CAAGCTACAATTATGGGCCC+AGG | 0.551929 | 8.3:-31508149 | MS.gene82988:CDS |
| GAGTGACAAAGCTAAGTATG+AGG | 0.561393 | 8.3:-31506410 | MS.gene82988:CDS |
| ATTGCTCTTTCAGGATGTCA+AGG | 0.568753 | 8.3:+31506941 | None:intergenic |
| TGGAACATATCATCAGCGAC+AGG | 0.569142 | 8.3:+31508176 | None:intergenic |
| CTAAGTATGAGGCCACTGCT+CGG | 0.591968 | 8.3:-31506399 | MS.gene82988:CDS |
| AGATCACCTTGGATATTGTG+AGG | 0.593954 | 8.3:+31506908 | None:intergenic |
| CCCTGCCCTCACAATATCCA+AGG | 0.594906 | 8.3:-31506914 | MS.gene82988:intron |
| ATGGACCCAGAAATATGCCA+TGG | 0.598403 | 8.3:-31506374 | MS.gene82988:CDS |
| CTTGGCCATCCCTTAACCCA+TGG | 0.604057 | 8.3:+31506357 | None:intergenic |
| GATCACCTTGGATATTGTGA+GGG | 0.604360 | 8.3:+31506909 | None:intergenic |
| CAGGGACCAGAGGATCATCT+GGG | 0.604692 | 8.3:+31506452 | None:intergenic |
| CACCCTAATATCAACAGTAA+CGG | 0.606586 | 8.3:-31506973 | MS.gene82988:CDS |
| TTGACATCCTGAAAGAGCAA+TGG | 0.608625 | 8.3:-31506939 | MS.gene82988:CDS |
| CCATAATTGTAGCTTGCCAA+TGG | 0.608901 | 8.3:+31508156 | None:intergenic |
| TTATCCTTTCAAACCACCCA+AGG | 0.609431 | 8.3:-31508072 | MS.gene82988:intron |
| TCGCTGATGATATGTTCCAT+TGG | 0.614388 | 8.3:-31508172 | MS.gene82988:CDS |
| CGTTACTGTTGATATTAGGG+TGG | 0.631865 | 8.3:+31506974 | None:intergenic |
| CTGGGTCCATGACCGAGCAG+TGG | 0.634278 | 8.3:+31506387 | None:intergenic |
| TCAGGTTTCATTCCGCACAA+AGG | 0.634356 | 8.3:-31507001 | MS.gene82988:intron |
| GGAACATATCATCAGCGACA+GGG | 0.652409 | 8.3:+31508177 | None:intergenic |
| TAGGGTGGAAAACCTTTGTG+CGG | 0.653142 | 8.3:+31506989 | None:intergenic |
| TGGACCCAGAAATATGCCAT+GGG | 0.659562 | 8.3:-31506373 | MS.gene82988:CDS |
| TGAGCAATTTCAGGGACCAG+AGG | 0.676101 | 8.3:+31506442 | None:intergenic |
| GTTTGAAAGGATAATCCGGA+GGG | 0.687186 | 8.3:+31508081 | None:intergenic |
| GGAGATAGCCCATTTGCGGG+AGG | 0.688783 | 8.3:-31508128 | MS.gene82988:CDS |
| GGTTTGAAAGGATAATCCGG+AGG | 0.710430 | 8.3:+31508080 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTAAATATCAATTGTAT+TGG | - | chr8.3:31506771-31506790 | MS.gene82988:intron | 10.0% |
| !!! | TATTTGAAGCAAAAATAATT+GGG | + | chr8.3:31506943-31506962 | None:intergenic | 15.0% |
| !! | CCATTAACTACAATTAATAT+GGG | + | chr8.3:31507775-31507794 | None:intergenic | 20.0% |
| !! | TAAAATGTAAGATCATAAGA+AGG | + | chr8.3:31507149-31507168 | None:intergenic | 20.0% |
| !! | TCCATTAACTACAATTAATA+TGG | + | chr8.3:31507776-31507795 | None:intergenic | 20.0% |
| !!! | AATAAATAAGAGTGTATTAG+TGG | - | chr8.3:31507818-31507837 | MS.gene82988:intron | 20.0% |
| !!! | GTATTTGAAGCAAAAATAAT+TGG | + | chr8.3:31506944-31506963 | None:intergenic | 20.0% |
| !!! | TCTAAAATGACAAATTATAC+TGG | - | chr8.3:31507952-31507971 | MS.gene82988:intron | 20.0% |
| !!! | TTAAATTGTGGTTTTAACAA+CGG | + | chr8.3:31506831-31506850 | None:intergenic | 20.0% |
| ! | AAGCAAAAATAATTGGGATT+TGG | + | chr8.3:31506937-31506956 | None:intergenic | 25.0% |
| ! | AGCAAAAATAATTGGGATTT+GGG | + | chr8.3:31506936-31506955 | None:intergenic | 25.0% |
| ! | ATAGAATATTAAGATCACCT+TGG | + | chr8.3:31507653-31507672 | None:intergenic | 25.0% |
| ! | ATTTGCATAAAGCAGAATTT+GGG | + | chr8.3:31506505-31506524 | None:intergenic | 25.0% |
| ! | CATTCATTATCAATATGTTC+AGG | - | chr8.3:31507528-31507547 | MS.gene82988:intron | 25.0% |
| ! | CCCATATTAATTGTAGTTAA+TGG | - | chr8.3:31507772-31507791 | MS.gene82988:intron | 25.0% |
| ! | TCCTACAAATATAATTACTG+AGG | + | chr8.3:31507194-31507213 | None:intergenic | 25.0% |
| ! | TCCTCAGTAATTATATTTGT+AGG | - | chr8.3:31507190-31507209 | MS.gene82988:intron | 25.0% |
| ! | TTCCAATATTACCAACAAAA+GGG | + | chr8.3:31507300-31507319 | None:intergenic | 25.0% |
| !! | ATTTTTGCTTCAAATACACT+GGG | - | chr8.3:31506947-31506966 | MS.gene82988:CDS | 25.0% |
| !! | CTGAAATATTAGAATTTTGC+AGG | - | chr8.3:31508035-31508054 | MS.gene82988:intron | 25.0% |
| !! | TTGTTTGAATTTTCTTGTCA+GGG | - | chr8.3:31508009-31508028 | MS.gene82988:intron | 25.0% |
| !! | TTTGTTTGAATTTTCTTGTC+AGG | - | chr8.3:31508008-31508027 | MS.gene82988:intron | 25.0% |
| !!! | AAGTGAATGGAATAGTTTTT+TGG | - | chr8.3:31507985-31508004 | MS.gene82988:intron | 25.0% |
| !!! | TATTTTTGCTTCAAATACAC+TGG | - | chr8.3:31506946-31506965 | MS.gene82988:CDS | 25.0% |
| AAATGAGCTTCATTTACGAA+AGG | - | chr8.3:31507748-31507767 | MS.gene82988:intron | 30.0% | |
| AATGTATAACAGACACATGT+TGG | - | chr8.3:31506522-31506541 | MS.gene82988:intron | 30.0% | |
| ACACAAAGTGGAATTATGAA+GGG | + | chr8.3:31507494-31507513 | None:intergenic | 30.0% | |
| ATAATTACTGAGGATCAGAA+TGG | + | chr8.3:31507184-31507203 | None:intergenic | 30.0% | |
| ATGTATAACAGACACATGTT+GGG | - | chr8.3:31506523-31506542 | MS.gene82988:intron | 30.0% | |
| CATTTGCATAAAGCAGAATT+TGG | + | chr8.3:31506506-31506525 | None:intergenic | 30.0% | |
| CGATCATGCAATTTAAATTG+TGG | + | chr8.3:31506843-31506862 | None:intergenic | 30.0% | |
| CTTCCAATATTACCAACAAA+AGG | + | chr8.3:31507301-31507320 | None:intergenic | 30.0% | |
| GCAAAAATAATTGGGATTTG+GGG | + | chr8.3:31506935-31506954 | None:intergenic | 30.0% | |
| GTCATCTTCTTTATGACATA+TGG | - | chr8.3:31506898-31506917 | MS.gene82988:intron | 30.0% | |
| TAATTACTGAGGATCAGAAT+GGG | + | chr8.3:31507183-31507202 | None:intergenic | 30.0% | |
| TACCGTTACTGTTGATATTA+GGG | + | chr8.3:31507579-31507598 | None:intergenic | 30.0% | |
| TCAGAATCAAACATAACACA+TGG | + | chr8.3:31507111-31507130 | None:intergenic | 30.0% | |
| TCCAATATTACCAACAAAAG+GGG | + | chr8.3:31507299-31507318 | None:intergenic | 30.0% | |
| TGATTTCCATTGTTATATGC+TGG | + | chr8.3:31506658-31506677 | None:intergenic | 30.0% | |
| TGTACATATGAGCAATTTCA+GGG | + | chr8.3:31508116-31508135 | None:intergenic | 30.0% | |
| TTGTACATATGAGCAATTTC+AGG | + | chr8.3:31508117-31508136 | None:intergenic | 30.0% | |
| ! | GTGTTTGAAGCAAAAGTAAT+TGG | + | chr8.3:31506986-31507005 | None:intergenic | 30.0% |
| !!! | AACTCCAAATCTTTTTTGCA+AGG | - | chr8.3:31506704-31506723 | MS.gene82988:intron | 30.0% |
| AACAAGATCATGCCTAAGAT+TGG | + | chr8.3:31507253-31507272 | None:intergenic | 35.0% | |
| ACAACTGGCTACACATAATT+AGG | + | chr8.3:31507394-31507413 | None:intergenic | 35.0% | |
| ACAAGATCATGCCTAAGATT+GGG | + | chr8.3:31507252-31507271 | None:intergenic | 35.0% | |
| ATACAAACACTCACACAAAG+TGG | + | chr8.3:31507506-31507525 | None:intergenic | 35.0% | |
| ATCAGTCAACAGAGAACAAA+TGG | + | chr8.3:31508070-31508089 | None:intergenic | 35.0% | |
| CAACTGGCTACACATAATTA+GGG | + | chr8.3:31507393-31507412 | None:intergenic | 35.0% | |
| CACACAAAGTGGAATTATGA+AGG | + | chr8.3:31507495-31507514 | None:intergenic | 35.0% | |
| CACCCTAATATCAACAGTAA+CGG | - | chr8.3:31507574-31507593 | MS.gene82988:intron | 35.0% | |
| CATTGGCAAGCTACAATTAT+GGG | - | chr8.3:31506392-31506411 | MS.gene82988:CDS | 35.0% | |
| CTACCGTTACTGTTGATATT+AGG | + | chr8.3:31507580-31507599 | None:intergenic | 35.0% | |
| CTGTCCTTGCAAAAAAGATT+TGG | + | chr8.3:31506711-31506730 | None:intergenic | 35.0% | |
| CTTTAGCCAGCATATAACAA+TGG | - | chr8.3:31506649-31506668 | MS.gene82988:intron | 35.0% | |
| GAATCAAACATAACACATGG+TGG | + | chr8.3:31507108-31507127 | None:intergenic | 35.0% | |
| GCATCTCTATAATGAACAAC+TGG | + | chr8.3:31507409-31507428 | None:intergenic | 35.0% | |
| TGGACAAGTGATTAAGTGAA+TGG | - | chr8.3:31507972-31507991 | MS.gene82988:intron | 35.0% | |
| TTAACCCATGGCATATTTCT+GGG | + | chr8.3:31508181-31508200 | None:intergenic | 35.0% | |
| !!! | TCCCCTTTTGTTGGTAATAT+TGG | - | chr8.3:31507295-31507314 | MS.gene82988:intron | 35.0% |
| ACATGTTGGGCTATATGTCT+AGG | - | chr8.3:31506536-31506555 | MS.gene82988:intron | 40.0% | |
| AGATCACCTTGGATATTGTG+AGG | + | chr8.3:31507642-31507661 | None:intergenic | 40.0% | |
| AGGATCTTACGATCCTTGTT+AGG | - | chr8.3:31507210-31507229 | MS.gene82988:intron | 40.0% | |
| ATTGCTCTTTCAGGATGTCA+AGG | + | chr8.3:31507609-31507628 | None:intergenic | 40.0% | |
| CCATTGGCAAGCTACAATTA+TGG | - | chr8.3:31506391-31506410 | MS.gene82988:CDS | 40.0% | |
| CGTTACTGTTGATATTAGGG+TGG | + | chr8.3:31507576-31507595 | None:intergenic | 40.0% | |
| GAGTGACAAAGCTAAGTATG+AGG | - | chr8.3:31508137-31508156 | MS.gene82988:CDS | 40.0% | |
| GATCACCTTGGATATTGTGA+GGG | + | chr8.3:31507641-31507660 | None:intergenic | 40.0% | |
| GGGATAGCAAAATCCTAACA+AGG | + | chr8.3:31507226-31507245 | None:intergenic | 40.0% | |
| GGTGGTTTGAAAGGATAATC+CGG | + | chr8.3:31506473-31506492 | None:intergenic | 40.0% | |
| GTTTGAAAGGATAATCCGGA+GGG | + | chr8.3:31506469-31506488 | None:intergenic | 40.0% | |
| TCACCATTCTACACAAGTAG+TGG | - | chr8.3:31506870-31506889 | MS.gene82988:intron | 40.0% | |
| TCGCTGATGATATGTTCCAT+TGG | - | chr8.3:31506375-31506394 | MS.gene82988:CDS | 40.0% | |
| TTATCCTTTCAAACCACCCA+AGG | - | chr8.3:31506475-31506494 | MS.gene82988:CDS | 40.0% | |
| TTGACATCCTGAAAGAGCAA+TGG | - | chr8.3:31507608-31507627 | MS.gene82988:intron | 40.0% | |
| TTTACCTTGGGTGGTTTGAA+AGG | + | chr8.3:31506482-31506501 | None:intergenic | 40.0% | |
| ! | AGCAGAATTTGGGTTTACCT+TGG | + | chr8.3:31506495-31506514 | None:intergenic | 40.0% |
| ! | CCATAATTGTAGCTTGCCAA+TGG | + | chr8.3:31506394-31506413 | None:intergenic | 40.0% |
| ! | GCAGAATTTGGGTTTACCTT+GGG | + | chr8.3:31506494-31506513 | None:intergenic | 40.0% |
| ! | TGTTTTGCTTCCCCTTTTGT+TGG | - | chr8.3:31507286-31507305 | MS.gene82988:intron | 40.0% |
| !! | GTGGTGGATTGAATCAGATT+GGG | + | chr8.3:31507371-31507390 | None:intergenic | 40.0% |
| !! | TGGTGGATTGAATCAGATTG+GGG | + | chr8.3:31507370-31507389 | None:intergenic | 40.0% |
| ATCATGCCTAAGATTGGGAG+AGG | + | chr8.3:31507247-31507266 | None:intergenic | 45.0% | |
| ATGGACCCAGAAATATGCCA+TGG | - | chr8.3:31508173-31508192 | MS.gene82988:CDS | 45.0% | |
| CCACCACTACTTGTGTAGAA+TGG | + | chr8.3:31506876-31506895 | None:intergenic | 45.0% | |
| CCATTCTACACAAGTAGTGG+TGG | - | chr8.3:31506873-31506892 | MS.gene82988:intron | 45.0% | |
| CTGGCTACACATAATTAGGG+TGG | + | chr8.3:31507390-31507409 | None:intergenic | 45.0% | |
| GATCAGAATGGGTAGCAAGA+TGG | + | chr8.3:31507172-31507191 | None:intergenic | 45.0% | |
| GCTACACATAATTAGGGTGG+TGG | + | chr8.3:31507387-31507406 | None:intergenic | 45.0% | |
| GGAACATATCATCAGCGACA+GGG | + | chr8.3:31506373-31506392 | None:intergenic | 45.0% | |
| GGTTTGAAAGGATAATCCGG+AGG | + | chr8.3:31506470-31506489 | None:intergenic | 45.0% | |
| TAGGGTGGAAAACCTTTGTG+CGG | + | chr8.3:31507561-31507580 | None:intergenic | 45.0% | |
| TCAGGTTTCATTCCGCACAA+AGG | - | chr8.3:31507546-31507565 | MS.gene82988:intron | 45.0% | |
| TCATGCCTAAGATTGGGAGA+GGG | + | chr8.3:31507246-31507265 | None:intergenic | 45.0% | |
| TGGAACATATCATCAGCGAC+AGG | + | chr8.3:31506374-31506393 | None:intergenic | 45.0% | |
| TGGACCCAGAAATATGCCAT+GGG | - | chr8.3:31508174-31508193 | MS.gene82988:CDS | 45.0% | |
| TGTGCAAATTCACTTCCCTC+CGG | - | chr8.3:31506451-31506470 | MS.gene82988:CDS | 45.0% | |
| TTCAAATACACTGGGAGCGA+TGG | - | chr8.3:31506955-31506974 | MS.gene82988:CDS | 45.0% | |
| ! | GAATTTGGGTTTACCTTGGG+TGG | + | chr8.3:31506491-31506510 | None:intergenic | 45.0% |
| !! | GGTGGTGGATTGAATCAGAT+TGG | + | chr8.3:31507372-31507391 | None:intergenic | 45.0% |
| ACCAGAGGATCATCTGGGTT+GGG | + | chr8.3:31508093-31508112 | None:intergenic | 50.0% | |
| ACCTTGGATATTGTGAGGGC+AGG | + | chr8.3:31507637-31507656 | None:intergenic | 50.0% | |
| AGAAACACACCTCCCGCAAA+TGG | + | chr8.3:31506431-31506450 | None:intergenic | 50.0% | |
| CAAGCTACAATTATGGGCCC+AGG | - | chr8.3:31506398-31506417 | MS.gene82988:CDS | 50.0% | |
| CCTTGGATATTGTGAGGGCA+GGG | + | chr8.3:31507636-31507655 | None:intergenic | 50.0% | |
| CTAAGTATGAGGCCACTGCT+CGG | - | chr8.3:31508148-31508167 | MS.gene82988:CDS | 50.0% | |
| GAAACACACCTCCCGCAAAT+GGG | + | chr8.3:31506430-31506449 | None:intergenic | 50.0% | |
| GCTATCCCTCTCCCAATCTT+AGG | - | chr8.3:31507238-31507257 | MS.gene82988:intron | 50.0% | |
| TGAGCAATTTCAGGGACCAG+AGG | + | chr8.3:31508108-31508127 | None:intergenic | 50.0% | |
| CAGGGACCAGAGGATCATCT+GGG | + | chr8.3:31508098-31508117 | None:intergenic | 55.0% | |
| CAGGGCTCCATTGCTCTTTC+AGG | + | chr8.3:31507618-31507637 | None:intergenic | 55.0% | |
| CCAGGAGATAGCCCATTTGC+GGG | - | chr8.3:31506416-31506435 | MS.gene82988:CDS | 55.0% | |
| CCCAGGAGATAGCCCATTTG+CGG | - | chr8.3:31506415-31506434 | MS.gene82988:CDS | 55.0% | |
| CCCTGCCCTCACAATATCCA+AGG | - | chr8.3:31507633-31507652 | MS.gene82988:intron | 55.0% | |
| GACCAGAGGATCATCTGGGT+TGG | + | chr8.3:31508094-31508113 | None:intergenic | 55.0% | |
| GTTGCGCTACTAGCAAGAGC+TGG | + | chr8.3:31507064-31507083 | None:intergenic | 55.0% | |
| TCAGGGACCAGAGGATCATC+TGG | + | chr8.3:31508099-31508118 | None:intergenic | 55.0% | |
| TCCCAACCCAGATGATCCTC+TGG | - | chr8.3:31508089-31508108 | MS.gene82988:CDS | 55.0% | |
| !! | CCGCAAATGGGCTATCTCCT+GGG | + | chr8.3:31506418-31506437 | None:intergenic | 55.0% |
| ATGAGGCCACTGCTCGGTCA+TGG | - | chr8.3:31508154-31508173 | MS.gene82988:CDS | 60.0% | |
| GGAGATAGCCCATTTGCGGG+AGG | - | chr8.3:31506419-31506438 | MS.gene82988:CDS | 60.0% | |
| !! | CCCGCAAATGGGCTATCTCC+TGG | + | chr8.3:31506419-31506438 | None:intergenic | 60.0% |
| CTGGGTCCATGACCGAGCAG+TGG | + | chr8.3:31508163-31508182 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 31506369 | 31508200 | 31506369 | ID=MS.gene82988 |
| chr8.3 | mRNA | 31506369 | 31508200 | 31506369 | ID=MS.gene82988.t1;Parent=MS.gene82988 |
| chr8.3 | exon | 31508073 | 31508200 | 31508073 | ID=MS.gene82988.t1.exon1;Parent=MS.gene82988.t1 |
| chr8.3 | CDS | 31508073 | 31508200 | 31508073 | ID=cds.MS.gene82988.t1;Parent=MS.gene82988.t1 |
| chr8.3 | exon | 31506915 | 31507019 | 31506915 | ID=MS.gene82988.t1.exon2;Parent=MS.gene82988.t1 |
| chr8.3 | CDS | 31506915 | 31507019 | 31506915 | ID=cds.MS.gene82988.t1;Parent=MS.gene82988.t1 |
| chr8.3 | exon | 31506369 | 31506512 | 31506369 | ID=MS.gene82988.t1.exon3;Parent=MS.gene82988.t1 |
| chr8.3 | CDS | 31506369 | 31506512 | 31506369 | ID=cds.MS.gene82988.t1;Parent=MS.gene82988.t1 |
| Gene Sequence |
| Protein sequence |
