Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83173.t1 | XP_003607459.2 | 98.6 | 428 | 6 | 0 | 1 | 428 | 1 | 428 | 1.50E-254 | 888.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83173.t1 | Q7Y223 | 68.6 | 411 | 127 | 2 | 4 | 413 | 6 | 415 | 1.0e-171 | 604.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83173.t1 | G7JSU9 | 98.6 | 428 | 6 | 0 | 1 | 428 | 1 | 428 | 1.0e-254 | 888.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene010551 | MS.gene83173 | PPI |
| MS.gene02423 | MS.gene83173 | PPI |
| MS.gene59404 | MS.gene83173 | PPI |
| MS.gene64694 | MS.gene83173 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83173.t1 | MTR_4g078230 | 98.598 | 428 | 6 | 0 | 1 | 428 | 1 | 428 | 0.0 | 884 |
| MS.gene83173.t1 | MTR_2g090390 | 70.766 | 431 | 122 | 3 | 1 | 428 | 1 | 430 | 0.0 | 633 |
| MS.gene83173.t1 | MTR_8g005670 | 48.214 | 392 | 198 | 3 | 23 | 414 | 50 | 436 | 2.32e-136 | 399 |
| MS.gene83173.t1 | MTR_7g073550 | 49.215 | 382 | 192 | 2 | 33 | 414 | 53 | 432 | 4.19e-135 | 396 |
| MS.gene83173.t1 | MTR_7g073550 | 49.215 | 382 | 192 | 2 | 33 | 414 | 52 | 431 | 4.72e-135 | 395 |
| MS.gene83173.t1 | MTR_7g073620 | 48.691 | 382 | 194 | 2 | 33 | 414 | 5 | 384 | 2.48e-134 | 392 |
| MS.gene83173.t1 | MTR_8g006550 | 47.704 | 392 | 200 | 3 | 23 | 414 | 53 | 439 | 1.01e-133 | 392 |
| MS.gene83173.t1 | MTR_8g005270 | 47.704 | 392 | 200 | 3 | 23 | 414 | 33 | 419 | 1.22e-133 | 392 |
| MS.gene83173.t1 | MTR_4g043760 | 43.045 | 381 | 212 | 2 | 38 | 418 | 33 | 408 | 1.08e-119 | 355 |
| MS.gene83173.t1 | MTR_7g111740 | 43.122 | 378 | 207 | 3 | 36 | 413 | 59 | 428 | 9.18e-119 | 353 |
| MS.gene83173.t1 | MTR_5g020890 | 43.501 | 377 | 210 | 1 | 39 | 415 | 31 | 404 | 1.52e-118 | 353 |
| MS.gene83173.t1 | MTR_1g085420 | 43.200 | 375 | 209 | 2 | 39 | 413 | 32 | 402 | 3.83e-117 | 348 |
| MS.gene83173.t1 | MTR_1g085430 | 42.216 | 379 | 215 | 2 | 35 | 413 | 28 | 402 | 4.27e-117 | 348 |
| MS.gene83173.t1 | MTR_1g085310 | 40.852 | 399 | 231 | 3 | 17 | 415 | 7 | 400 | 1.06e-116 | 347 |
| MS.gene83173.t1 | MTR_3g112060 | 40.342 | 409 | 224 | 7 | 11 | 415 | 4 | 396 | 1.30e-114 | 342 |
| MS.gene83173.t1 | MTR_1g085350 | 42.819 | 376 | 207 | 4 | 39 | 413 | 89 | 457 | 4.61e-114 | 342 |
| MS.gene83173.t1 | MTR_1g085320 | 39.895 | 381 | 206 | 4 | 35 | 413 | 27 | 386 | 8.07e-104 | 313 |
| MS.gene83173.t1 | MTR_0005s0150 | 41.528 | 301 | 171 | 2 | 118 | 418 | 14 | 309 | 1.16e-86 | 267 |
| MS.gene83173.t1 | MTR_7g073320 | 34.211 | 114 | 61 | 3 | 301 | 414 | 12 | 111 | 3.18e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83173.t1 | AT2G20680 | 68.447 | 412 | 128 | 2 | 3 | 413 | 5 | 415 | 0.0 | 600 |
| MS.gene83173.t1 | AT4G28320 | 65.632 | 419 | 140 | 3 | 11 | 428 | 12 | 427 | 0.0 | 578 |
| MS.gene83173.t1 | AT5G01930 | 50.000 | 382 | 187 | 4 | 34 | 414 | 42 | 420 | 7.47e-135 | 395 |
| MS.gene83173.t1 | AT3G10900 | 42.750 | 400 | 224 | 4 | 13 | 410 | 3 | 399 | 3.16e-119 | 353 |
| MS.gene83173.t1 | AT3G10890 | 40.750 | 400 | 233 | 3 | 12 | 410 | 4 | 400 | 4.97e-117 | 348 |
| MS.gene83173.t1 | AT5G66460 | 43.236 | 377 | 209 | 2 | 39 | 415 | 31 | 402 | 1.46e-116 | 347 |
| MS.gene83173.t1 | AT1G02310 | 42.782 | 381 | 205 | 6 | 35 | 410 | 25 | 397 | 3.09e-110 | 330 |
| MS.gene83173.t1 | AT1G02310 | 42.782 | 381 | 205 | 6 | 35 | 410 | 45 | 417 | 4.06e-110 | 331 |
| MS.gene83173.t1 | AT3G30540 | 36.915 | 363 | 188 | 4 | 13 | 374 | 3 | 325 | 1.46e-81 | 254 |
Find 88 sgRNAs with CRISPR-Local
Find 231 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGGAACTCTTATTGGTTTA+TGG | 0.112024 | 4.2:+31800104 | MS.gene83173:CDS |
| TCGGAGTTTATAGATGATTT+TGG | 0.131553 | 4.2:+31803031 | MS.gene83173:CDS |
| GCTCAAAGCTGGGGCTAAAA+TGG | 0.169600 | 4.2:+31800170 | MS.gene83173:CDS |
| TCAATGGATGGAACTCTTAT+TGG | 0.181552 | 4.2:+31800097 | MS.gene83173:CDS |
| CTATTCATTTACATGTCATT+TGG | 0.262409 | 4.2:+31799985 | MS.gene83173:CDS |
| AGCCTGGATGCCCACCCTTC+TGG | 0.268536 | 4.2:-31802227 | None:intergenic |
| ACCGATGCAAAACAAAATAT+TGG | 0.294563 | 4.2:-31799958 | None:intergenic |
| TATTCATTTACATGTCATTT+GGG | 0.295499 | 4.2:+31799986 | MS.gene83173:CDS |
| TTGAAATAACTACGGATTGA+TGG | 0.339694 | 4.2:-31801579 | None:intergenic |
| ACGGTCCTAATGACCCAAAA+AGG | 0.350002 | 4.2:+31802189 | MS.gene83173:CDS |
| AAGAAACATCTGGTCACTAT+TGG | 0.350210 | 4.2:+31802152 | MS.gene83173:CDS |
| AAGCAAGGAGACATCGAATT+AGG | 0.353572 | 4.2:+31801439 | MS.gene83173:CDS |
| GTTTCAAACACGTGTGTTAG+AGG | 0.362067 | 4.2:+31803152 | MS.gene83173:CDS |
| TGAAGTCAATATTTGAGGTC+TGG | 0.369260 | 4.2:-31802274 | None:intergenic |
| GTCTAACTGTTTGTAGAACT+TGG | 0.370629 | 4.2:+31800193 | MS.gene83173:CDS |
| CCGGAGCAGGTGCTTTGGTT+TGG | 0.376363 | 4.2:+31802987 | MS.gene83173:CDS |
| TAACACACGTGTTTGAAACT+TGG | 0.379937 | 4.2:-31803148 | None:intergenic |
| GTAAATAACTTGCAAGCATA+TGG | 0.395677 | 4.2:+31801477 | MS.gene83173:CDS |
| CTGGTCACTATTGGACTTGA+AGG | 0.400223 | 4.2:+31802161 | MS.gene83173:CDS |
| CCGGTCCGGAGCAGGTGCTT+TGG | 0.400980 | 4.2:+31802982 | MS.gene83173:CDS |
| TTGGTTTGGCAGTTCTTAGT+TGG | 0.401946 | 4.2:+31803001 | MS.gene83173:CDS |
| TGGGCGTGGCAAGAAGGGCT+AGG | 0.402527 | 4.2:+31801522 | MS.gene83173:CDS |
| CACCAGAAGGGTGGGCATCC+AGG | 0.412892 | 4.2:+31802225 | MS.gene83173:CDS |
| AGCTACATGATGGCTGGAAA+TGG | 0.423564 | 4.2:+31799925 | None:intergenic |
| CCATATTCGGAGAACAAAAC+AGG | 0.423643 | 4.2:-31802866 | None:intergenic |
| ATAAATAGTGAATACATTGA+TGG | 0.424639 | 4.2:-31803073 | None:intergenic |
| TGAGTCTGATAATCCATATT+CGG | 0.432298 | 4.2:-31802879 | None:intergenic |
| CGGTGTTTAACTGATCCTTC+TGG | 0.450965 | 4.2:+31801893 | MS.gene83173:CDS |
| TTTACATGTCATTTGGGGTA+AGG | 0.451772 | 4.2:+31799992 | MS.gene83173:CDS |
| AACACACGTGTTTGAAACTT+GGG | 0.456110 | 4.2:-31803147 | None:intergenic |
| ATGTTTGCTTACCAATGGTC+AGG | 0.457439 | 4.2:-31802314 | None:intergenic |
| CCAAACCAAAGCACCTGCTC+CGG | 0.458860 | 4.2:-31802987 | None:intergenic |
| CATGTCATTTGGGGTAAGGA+TGG | 0.459188 | 4.2:+31799996 | MS.gene83173:CDS |
| CTGGATGCCCACCCTTCTGG+TGG | 0.463462 | 4.2:-31802224 | None:intergenic |
| CTCAAAGCTGGGGCTAAAAT+GGG | 0.465149 | 4.2:+31800171 | MS.gene83173:CDS |
| GAAGTCAATATTTGAGGTCT+GGG | 0.470450 | 4.2:-31802273 | None:intergenic |
| ACCAATGGTCAGGATAGATA+TGG | 0.470920 | 4.2:-31802304 | None:intergenic |
| GTTCAGTGGGCGTGGCAAGA+AGG | 0.478816 | 4.2:+31801516 | MS.gene83173:CDS |
| TCTAACTGTTTGTAGAACTT+GGG | 0.480684 | 4.2:+31800194 | MS.gene83173:CDS |
| GGGTCTCAGTTTGTGTTGGA+TGG | 0.488014 | 4.2:+31800060 | MS.gene83173:CDS |
| TTGGTTTATGGTTCAATCTG+TGG | 0.490056 | 4.2:+31800116 | MS.gene83173:CDS |
| ATCAGTATGTTCAGTGGGCG+TGG | 0.490144 | 4.2:+31801508 | MS.gene83173:CDS |
| TTCAGTGGGCGTGGCAAGAA+GGG | 0.490402 | 4.2:+31801517 | MS.gene83173:CDS |
| GTTTGGCAGTTCTTAGTTGG+CGG | 0.491516 | 4.2:+31803004 | MS.gene83173:CDS |
| GTAGGTGAAATGCTCAAAGC+TGG | 0.499749 | 4.2:+31800159 | MS.gene83173:CDS |
| ATCGATCGACAAGAAACATC+TGG | 0.501922 | 4.2:+31802142 | MS.gene83173:CDS |
| AGTCAATCCCTTGTTGACCT+TGG | 0.517619 | 4.2:-31803116 | None:intergenic |
| GAAGGGTGGGCATCCAGGCT+TGG | 0.519805 | 4.2:+31802230 | MS.gene83173:CDS |
| TTGAGCATTTCACCTACCCT+AGG | 0.519825 | 4.2:-31800153 | None:intergenic |
| TACATTGATGGCCTTTCCCA+TGG | 0.530278 | 4.2:-31803061 | None:intergenic |
| AATAAAATCAGATCCAAGCC+TGG | 0.531507 | 4.2:-31802243 | None:intergenic |
| AAAGGGGTCTCAGTTTGTGT+TGG | 0.534536 | 4.2:+31800056 | MS.gene83173:CDS |
| TGGATGCCCACCCTTCTGGT+GGG | 0.540926 | 4.2:-31802223 | None:intergenic |
| AGAGGTGAAGTCAATATTTG+AGG | 0.543588 | 4.2:-31802279 | None:intergenic |
| TAGGTGAAATGCTCAAAGCT+GGG | 0.551531 | 4.2:+31800160 | MS.gene83173:CDS |
| GGGCGTGGCAAGAAGGGCTA+GGG | 0.551659 | 4.2:+31801523 | MS.gene83173:CDS |
| GTTCTTAGTTGGCGGAATGT+CGG | 0.553060 | 4.2:+31803012 | MS.gene83173:CDS |
| TCCATATCTATCCTGACCAT+TGG | 0.556710 | 4.2:+31802303 | MS.gene83173:CDS |
| CCAAAGCACCTGCTCCGGAC+CGG | 0.557381 | 4.2:-31802982 | None:intergenic |
| TTGGGATGGTACCATGGGAA+AGG | 0.558037 | 4.2:+31803050 | MS.gene83173:CDS |
| AATAACTTGCAAGCATATGG+TGG | 0.563696 | 4.2:+31801480 | MS.gene83173:CDS |
| CAGACTAACCAAGGTCAACA+AGG | 0.568004 | 4.2:+31803108 | MS.gene83173:CDS |
| ATGCTTTCTCACATTGAAGA+TGG | 0.572573 | 4.2:+31802824 | MS.gene83173:CDS |
| GGAAAGATCAGTATGTTCAG+TGG | 0.575485 | 4.2:+31801502 | MS.gene83173:CDS |
| TGGATGCTTATACAAGACCT+AGG | 0.592318 | 4.2:+31800136 | MS.gene83173:CDS |
| ATAACTTGCAAGCATATGGT+GGG | 0.596743 | 4.2:+31801481 | MS.gene83173:CDS |
| TGTCAACCCACCAGAAGGGT+GGG | 0.604615 | 4.2:+31802217 | MS.gene83173:CDS |
| AATGCACTTCAGACTTCACC+TGG | 0.604731 | 4.2:+31800237 | MS.gene83173:CDS |
| GAAAGATCAGTATGTTCAGT+GGG | 0.608437 | 4.2:+31801503 | MS.gene83173:CDS |
| TTGACTGTCAACCCACCAGA+AGG | 0.612439 | 4.2:+31802212 | MS.gene83173:CDS |
| TTCTGCTATGACATAGTCCA+AGG | 0.612459 | 4.2:-31801418 | None:intergenic |
| ATTCATTTACATGTCATTTG+GGG | 0.615146 | 4.2:+31799987 | MS.gene83173:CDS |
| TGTCGCAGACTATTCTGACC+AGG | 0.615265 | 4.2:+31801798 | MS.gene83173:intron |
| CTGTCAACCCACCAGAAGGG+TGG | 0.616181 | 4.2:+31802216 | MS.gene83173:CDS |
| AATGTGAGAAAGCATCCACT+TGG | 0.626583 | 4.2:-31802816 | None:intergenic |
| GGATGCTTATACAAGACCTA+GGG | 0.627895 | 4.2:+31800137 | MS.gene83173:CDS |
| GAGAAAGCATCCACTTGGAG+AGG | 0.636971 | 4.2:-31802811 | None:intergenic |
| ATATGAAATTCCTCTCCAAG+TGG | 0.639292 | 4.2:+31802801 | MS.gene83173:CDS |
| ACTTGGAGAGTGTCACCAGA+AGG | 0.640926 | 4.2:-31801908 | None:intergenic |
| AGGTGAAATGCTCAAAGCTG+GGG | 0.652275 | 4.2:+31800161 | MS.gene83173:CDS |
| ACTATGTCATAGCAGAAGCA+AGG | 0.653190 | 4.2:+31801424 | MS.gene83173:CDS |
| TGACTGTCAACCCACCAGAA+GGG | 0.660952 | 4.2:+31802213 | MS.gene83173:CDS |
| GGGAACTGATCAATGAACCT+CGG | 0.676374 | 4.2:+31801873 | MS.gene83173:CDS |
| GCTTATACAAGACCTAGGGT+AGG | 0.687838 | 4.2:+31800141 | MS.gene83173:CDS |
| ACATTCATGCAGACTAACCA+AGG | 0.688133 | 4.2:+31803099 | MS.gene83173:CDS |
| AGACTAACCAAGGTCAACAA+GGG | 0.694195 | 4.2:+31803109 | MS.gene83173:CDS |
| GTCAGGATAGATATGGACAG+AGG | 0.702589 | 4.2:-31802297 | None:intergenic |
| GAAGGATCAGTTAAACACCG+AGG | 0.771230 | 4.2:-31801890 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAATATATTTATTTAAAGA+AGG | + | chr4.2:31801960-31801979 | MS.gene83173:intron | 10.0% |
| !! | CTTTAAATAAATATATTTGA+AGG | - | chr4.2:31801959-31801978 | None:intergenic | 10.0% |
| !! | TTAAATAAATATATTTGAAG+GGG | - | chr4.2:31801957-31801976 | None:intergenic | 10.0% |
| !! | TTATTTCAAAAATTATGTTA+AGG | + | chr4.2:31801593-31801612 | MS.gene83173:CDS | 10.0% |
| !! | AAACAAATTATTGATAAGAT+GGG | - | chr4.2:31802627-31802646 | None:intergenic | 15.0% |
| !! | AAAGTATAATACAAAAAGAA+AGG | - | chr4.2:31801252-31801271 | None:intergenic | 15.0% |
| !! | ATTTATTTGTGCTTAAATTT+AGG | + | chr4.2:31801036-31801055 | MS.gene83173:intron | 15.0% |
| !! | TAAAAATACAACAAAATTTC+AGG | - | chr4.2:31800495-31800514 | None:intergenic | 15.0% |
| !! | TAAATAAATATATTTGAAGG+GGG | - | chr4.2:31801956-31801975 | None:intergenic | 15.0% |
| !!! | AAACATTTTTCATTTCTATT+AGG | - | chr4.2:31801287-31801306 | None:intergenic | 15.0% |
| !!! | CATAATTTTTGAAATAACTA+CGG | - | chr4.2:31801590-31801609 | None:intergenic | 15.0% |
| !!! | TTGTATTTTTATGATATGAT+TGG | + | chr4.2:31800504-31800523 | MS.gene83173:intron | 15.0% |
| !!! | TTTTGTATGTATAATATAAC+TGG | + | chr4.2:31800551-31800570 | MS.gene83173:intron | 15.0% |
| !! | AAATTTAGGAGAGAAAAATT+GGG | + | chr4.2:31801050-31801069 | MS.gene83173:intron | 20.0% |
| !! | ATAAATAGTGAATACATTGA+TGG | - | chr4.2:31803076-31803095 | None:intergenic | 20.0% |
| !! | ATGAATGAAAACTTTATTGA+GGG | + | chr4.2:31801379-31801398 | MS.gene83173:intron | 20.0% |
| !! | CAAACAAATTATTGATAAGA+TGG | - | chr4.2:31802628-31802647 | None:intergenic | 20.0% |
| !! | TAAATTTAGGAGAGAAAAAT+TGG | + | chr4.2:31801049-31801068 | MS.gene83173:intron | 20.0% |
| !!! | ATTTTCTAAATTTACACTTG+AGG | - | chr4.2:31801195-31801214 | None:intergenic | 20.0% |
| !!! | CAAAATCTTTATTTTCTGTT+TGG | + | chr4.2:31801344-31801363 | MS.gene83173:intron | 20.0% |
| !!! | TATTCATTTACATGTCATTT+GGG | + | chr4.2:31799986-31800005 | MS.gene83173:CDS | 20.0% |
| !!! | TCATTTTCTCAAATTATTAC+AGG | - | chr4.2:31802430-31802449 | None:intergenic | 20.0% |
| ! | AAAATATGAAATTCAACACG+AGG | - | chr4.2:31800333-31800352 | None:intergenic | 25.0% |
| ! | AAAGAATGAGATATTTGCAT+TGG | - | chr4.2:31802042-31802061 | None:intergenic | 25.0% |
| ! | AAGTTGTATCAAAATTCAAG+AGG | - | chr4.2:31801645-31801664 | None:intergenic | 25.0% |
| ! | ATCAGAAGAAAGATCTTAAA+AGG | - | chr4.2:31802666-31802685 | None:intergenic | 25.0% |
| ! | CAAAAGACGAATAAAAACAA+AGG | - | chr4.2:31802750-31802769 | None:intergenic | 25.0% |
| ! | CAACAAAAAAGTTAAAGAGA+AGG | - | chr4.2:31800466-31800485 | None:intergenic | 25.0% |
| ! | CTATTCATTTACATGTCATT+TGG | + | chr4.2:31799985-31800004 | MS.gene83173:CDS | 25.0% |
| ! | GATGAATGAAAACTTTATTG+AGG | + | chr4.2:31801378-31801397 | MS.gene83173:intron | 25.0% |
| ! | TAGCATTATCAATGACAAAT+TGG | + | chr4.2:31801996-31802015 | MS.gene83173:intron | 25.0% |
| ! | TCAGAAGAAAGATCTTAAAA+GGG | - | chr4.2:31802665-31802684 | None:intergenic | 25.0% |
| !! | AAAATAAAGATTTTGCTCCA+TGG | - | chr4.2:31801339-31801358 | None:intergenic | 25.0% |
| !! | AAACTTTATTGAGGGTTTTA+TGG | + | chr4.2:31801387-31801406 | MS.gene83173:intron | 25.0% |
| !! | AAATTCTATATCTGCAGTTT+TGG | + | chr4.2:31802342-31802361 | MS.gene83173:intron | 25.0% |
| !! | AGAAATAGAGTTAAGTTTTG+TGG | + | chr4.2:31800029-31800048 | MS.gene83173:CDS | 25.0% |
| !! | ATTCATTTACATGTCATTTG+GGG | + | chr4.2:31799987-31800006 | MS.gene83173:CDS | 25.0% |
| !! | CCAATTTTGCAAAATTTGTA+GGG | + | chr4.2:31800620-31800639 | MS.gene83173:intron | 25.0% |
| !! | CCTACAAATTTTGCAAAATT+GGG | - | chr4.2:31800622-31800641 | None:intergenic | 25.0% |
| !! | TTTTGATGAACAAGCTTTTA+AGG | + | chr4.2:31800263-31800282 | MS.gene83173:CDS | 25.0% |
| !!! | AACTTTATTGAGGGTTTTAT+GGG | + | chr4.2:31801388-31801407 | MS.gene83173:intron | 25.0% |
| !!! | AATGTTTTTTTGTTTCGTGT+CGG | + | chr4.2:31801300-31801319 | MS.gene83173:intron | 25.0% |
| !!! | TCCAATATTTTGTTTTGCAT+CGG | + | chr4.2:31799957-31799976 | MS.gene83173:CDS | 25.0% |
| !!! | TTAAGTTTTGTGGAAAGAAA+GGG | + | chr4.2:31800039-31800058 | MS.gene83173:CDS | 25.0% |
| AAACAATGTTTGCTTACCAA+TGG | - | chr4.2:31802322-31802341 | None:intergenic | 30.0% | |
| AATTCAAGAGGAAGAAAAAC+AGG | - | chr4.2:31801633-31801652 | None:intergenic | 30.0% | |
| ACAAATCTGCTAAGAAAAAC+CGG | + | chr4.2:31802963-31802982 | MS.gene83173:CDS | 30.0% | |
| ACCAGGAAAAATACTATTAC+TGG | + | chr4.2:31801815-31801834 | MS.gene83173:CDS | 30.0% | |
| ACCGATGCAAAACAAAATAT+TGG | - | chr4.2:31799961-31799980 | None:intergenic | 30.0% | |
| ATATATTTGAAGGGGGTTAA+AGG | - | chr4.2:31801949-31801968 | None:intergenic | 30.0% | |
| ATTGTATACTCAAGAAATCC+AGG | - | chr4.2:31802065-31802084 | None:intergenic | 30.0% | |
| GATAACTTTGTACGTGTAAT+TGG | + | chr4.2:31800575-31800594 | MS.gene83173:intron | 30.0% | |
| GATTAAGACCAAAGGATAAA+GGG | - | chr4.2:31800932-31800951 | None:intergenic | 30.0% | |
| GCAACTAAAATTGAAATGTC+CGG | - | chr4.2:31801723-31801742 | None:intergenic | 30.0% | |
| GGTAAATTGATTAAGACCAA+AGG | - | chr4.2:31800940-31800959 | None:intergenic | 30.0% | |
| TATCAAACTCTCAACTATGT+CGG | - | chr4.2:31800406-31800425 | None:intergenic | 30.0% | |
| TCTAACTGTTTGTAGAACTT+GGG | + | chr4.2:31800194-31800213 | MS.gene83173:CDS | 30.0% | |
| TGAGTCTGATAATCCATATT+CGG | - | chr4.2:31802882-31802901 | None:intergenic | 30.0% | |
| TGATTAAGACCAAAGGATAA+AGG | - | chr4.2:31800933-31800952 | None:intergenic | 30.0% | |
| TGTAATTGGTGAGATTCATT+CGG | + | chr4.2:31800589-31800608 | MS.gene83173:intron | 30.0% | |
| ! | AAGCTTTTTACATCAATGGA+TGG | + | chr4.2:31800085-31800104 | MS.gene83173:CDS | 30.0% |
| ! | ATTGGACTTGAAGGTTTTTA+CGG | + | chr4.2:31802170-31802189 | MS.gene83173:CDS | 30.0% |
| ! | CCCAATTTTGCAAAATTTGT+AGG | + | chr4.2:31800619-31800638 | MS.gene83173:intron | 30.0% |
| ! | CCCTACAAATTTTGCAAAAT+TGG | - | chr4.2:31800623-31800642 | None:intergenic | 30.0% |
| ! | CGGAGTTTATAGATGATTTT+GGG | + | chr4.2:31803032-31803051 | MS.gene83173:CDS | 30.0% |
| ! | GGAAAAGCTTTTTACATCAA+TGG | + | chr4.2:31800081-31800100 | MS.gene83173:CDS | 30.0% |
| ! | GTAAATAACTTGCAAGCATA+TGG | + | chr4.2:31801477-31801496 | MS.gene83173:CDS | 30.0% |
| ! | GTTTTTCTTAGCAGATTTGT+GGG | - | chr4.2:31802963-31802982 | None:intergenic | 30.0% |
| ! | TCCAGTAATAGTATTTTTCC+TGG | - | chr4.2:31801819-31801838 | None:intergenic | 30.0% |
| ! | TCGGAGTTTATAGATGATTT+TGG | + | chr4.2:31803031-31803050 | MS.gene83173:CDS | 30.0% |
| ! | TTGAAATAACTACGGATTGA+TGG | - | chr4.2:31801582-31801601 | None:intergenic | 30.0% |
| ! | TTGATAACTACTTAGACTGT+TGG | + | chr4.2:31800420-31800439 | MS.gene83173:intron | 30.0% |
| ! | TTTTTATTCGTCTTTTGCGT+AGG | + | chr4.2:31802753-31802772 | MS.gene83173:intron | 30.0% |
| !! | ATGGAACTCTTATTGGTTTA+TGG | + | chr4.2:31800104-31800123 | MS.gene83173:CDS | 30.0% |
| !! | GTTAAGTTTTGTGGAAAGAA+AGG | + | chr4.2:31800038-31800057 | MS.gene83173:CDS | 30.0% |
| !! | GTTTATAGATGATTTTGGGA+TGG | + | chr4.2:31803036-31803055 | MS.gene83173:CDS | 30.0% |
| !! | TAAGTTTTGTGGAAAGAAAG+GGG | + | chr4.2:31800040-31800059 | MS.gene83173:CDS | 30.0% |
| !! | TAGGGAAATAACTTTTGAAG+TGG | + | chr4.2:31800638-31800657 | MS.gene83173:intron | 30.0% |
| !! | TTGTTTTGTACATCTTCTCT+CGG | - | chr4.2:31802928-31802947 | None:intergenic | 30.0% |
| !!! | AATATTTTGTTTTGCATCGG+TGG | + | chr4.2:31799960-31799979 | MS.gene83173:CDS | 30.0% |
| !!! | TTCTTTGCTTTTTGTTTTGC+CGG | + | chr4.2:31801697-31801716 | MS.gene83173:intron | 30.0% |
| AAGAAACATCTGGTCACTAT+TGG | + | chr4.2:31802152-31802171 | MS.gene83173:CDS | 35.0% | |
| AAGAGGAAGAAAAACAGGAT+AGG | - | chr4.2:31801628-31801647 | None:intergenic | 35.0% | |
| AATAAAATCAGATCCAAGCC+TGG | - | chr4.2:31802246-31802265 | None:intergenic | 35.0% | |
| AGAGGTGAAGTCAATATTTG+AGG | - | chr4.2:31802282-31802301 | None:intergenic | 35.0% | |
| AGGAGAGAAAAATTGGGAAA+GGG | + | chr4.2:31801056-31801075 | MS.gene83173:intron | 35.0% | |
| AGTTCCCAACCAAAAATGAT+AGG | - | chr4.2:31801860-31801879 | None:intergenic | 35.0% | |
| ATACCACTTTCCAAGATCAA+TGG | - | chr4.2:31800724-31800743 | None:intergenic | 35.0% | |
| ATATGAAATTCCTCTCCAAG+TGG | + | chr4.2:31802801-31802820 | MS.gene83173:CDS | 35.0% | |
| ATGCTTTCTCACATTGAAGA+TGG | + | chr4.2:31802824-31802843 | MS.gene83173:CDS | 35.0% | |
| ATTTCAGGAAGAAATCGACA+TGG | - | chr4.2:31800961-31800980 | None:intergenic | 35.0% | |
| GAAAGATCAGTATGTTCAGT+GGG | + | chr4.2:31801503-31801522 | MS.gene83173:CDS | 35.0% | |
| GACATGTTTACCATTGATCT+TGG | + | chr4.2:31800711-31800730 | MS.gene83173:intron | 35.0% | |
| GATTGGATGCTTTCAAAACA+AGG | + | chr4.2:31800521-31800540 | MS.gene83173:intron | 35.0% | |
| GCAAATATCTCATTCTTTCC+TGG | + | chr4.2:31802044-31802063 | MS.gene83173:intron | 35.0% | |
| GTAATTGGTGAGATTCATTC+GGG | + | chr4.2:31800590-31800609 | MS.gene83173:intron | 35.0% | |
| GTCTAACTGTTTGTAGAACT+TGG | + | chr4.2:31800193-31800212 | MS.gene83173:CDS | 35.0% | |
| GTTCCCAACCAAAAATGATA+GGG | - | chr4.2:31801859-31801878 | None:intergenic | 35.0% | |
| TAAATTTACACTTGAGGTGC+TGG | - | chr4.2:31801189-31801208 | None:intergenic | 35.0% | |
| TACAGACAAAAAGTGAGAAG+TGG | + | chr4.2:31800768-31800787 | MS.gene83173:intron | 35.0% | |
| TAGGAGAGAAAAATTGGGAA+AGG | + | chr4.2:31801055-31801074 | MS.gene83173:intron | 35.0% | |
| TCAATGGATGGAACTCTTAT+TGG | + | chr4.2:31800097-31800116 | MS.gene83173:CDS | 35.0% | |
| TCCTATAGAGCTGAAATTTG+AGG | + | chr4.2:31800689-31800708 | MS.gene83173:intron | 35.0% | |
| TCCTCAAATTTCAGCTCTAT+AGG | - | chr4.2:31800693-31800712 | None:intergenic | 35.0% | |
| TGACAAATTGGACATTGAAG+TGG | + | chr4.2:31802008-31802027 | MS.gene83173:intron | 35.0% | |
| TTACCATTGATCTTGGAAAG+TGG | + | chr4.2:31800718-31800737 | MS.gene83173:intron | 35.0% | |
| TTGGTTTATGGTTCAATCTG+TGG | + | chr4.2:31800116-31800135 | MS.gene83173:CDS | 35.0% | |
| ! | AACACACGTGTTTGAAACTT+GGG | - | chr4.2:31803150-31803169 | None:intergenic | 35.0% |
| ! | AATAACTTGCAAGCATATGG+TGG | + | chr4.2:31801480-31801499 | MS.gene83173:CDS | 35.0% |
| ! | AGAACTTGGGCTTTTAATGA+TGG | + | chr4.2:31800207-31800226 | MS.gene83173:CDS | 35.0% |
| ! | AGACATGACCCTATCATTTT+TGG | + | chr4.2:31801848-31801867 | MS.gene83173:CDS | 35.0% |
| ! | ATAACTTGCAAGCATATGGT+GGG | + | chr4.2:31801481-31801500 | MS.gene83173:CDS | 35.0% |
| ! | GAAGTCAATATTTGAGGTCT+GGG | - | chr4.2:31802276-31802295 | None:intergenic | 35.0% |
| ! | GGCTTGGATCTGATTTTATT+AGG | + | chr4.2:31802246-31802265 | MS.gene83173:CDS | 35.0% |
| ! | GGTTTTTCTTAGCAGATTTG+TGG | - | chr4.2:31802964-31802983 | None:intergenic | 35.0% |
| ! | TAACACACGTGTTTGAAACT+TGG | - | chr4.2:31803151-31803170 | None:intergenic | 35.0% |
| ! | TGAAGTCAATATTTGAGGTC+TGG | - | chr4.2:31802277-31802296 | None:intergenic | 35.0% |
| ! | TGATCATTTTACAACTACCC+CGG | + | chr4.2:31801109-31801128 | MS.gene83173:intron | 35.0% |
| ! | TTTACATGTCATTTGGGGTA+AGG | + | chr4.2:31799992-31800011 | MS.gene83173:CDS | 35.0% |
| !! | ATGTCGATTTCTTCCTGAAA+TGG | + | chr4.2:31800960-31800979 | MS.gene83173:intron | 35.0% |
| !!! | ATGACCCTATCATTTTTGGT+TGG | + | chr4.2:31801852-31801871 | MS.gene83173:CDS | 35.0% |
| !!! | TGACCCTATCATTTTTGGTT+GGG | + | chr4.2:31801853-31801872 | MS.gene83173:CDS | 35.0% |
| AAGCAAGGAGACATCGAATT+AGG | + | chr4.2:31801439-31801458 | MS.gene83173:CDS | 40.0% | |
| ACATTCATGCAGACTAACCA+AGG | + | chr4.2:31803099-31803118 | MS.gene83173:CDS | 40.0% | |
| ACCAATGGTCAGGATAGATA+TGG | - | chr4.2:31802307-31802326 | None:intergenic | 40.0% | |
| ACTATGTCATAGCAGAAGCA+AGG | + | chr4.2:31801424-31801443 | MS.gene83173:CDS | 40.0% | |
| AGACTAACCAAGGTCAACAA+GGG | + | chr4.2:31803109-31803128 | MS.gene83173:CDS | 40.0% | |
| AGAGAAAAATTGGGAAAGGG+GGG | + | chr4.2:31801059-31801078 | MS.gene83173:intron | 40.0% | |
| ATCGATCGACAAGAAACATC+TGG | + | chr4.2:31802142-31802161 | MS.gene83173:CDS | 40.0% | |
| ATGTTTGCTTACCAATGGTC+AGG | - | chr4.2:31802317-31802336 | None:intergenic | 40.0% | |
| CCATATTCGGAGAACAAAAC+AGG | - | chr4.2:31802869-31802888 | None:intergenic | 40.0% | |
| CTAAAATTGAAATGTCCGGC+CGG | - | chr4.2:31801719-31801738 | None:intergenic | 40.0% | |
| CTTAATTGCCATAGAACTGC+AGG | + | chr4.2:31802088-31802107 | MS.gene83173:intron | 40.0% | |
| GAGAGAAAAATTGGGAAAGG+GGG | + | chr4.2:31801058-31801077 | MS.gene83173:intron | 40.0% | |
| GCTTGTTCATCAAAAACACC+AGG | - | chr4.2:31800258-31800277 | None:intergenic | 40.0% | |
| GGAAAGATCAGTATGTTCAG+TGG | + | chr4.2:31801502-31801521 | MS.gene83173:CDS | 40.0% | |
| GGAGAGAAAAATTGGGAAAG+GGG | + | chr4.2:31801057-31801076 | MS.gene83173:intron | 40.0% | |
| GGATGCTTATACAAGACCTA+GGG | + | chr4.2:31800137-31800156 | MS.gene83173:CDS | 40.0% | |
| GTGGTATGATCATATGCGTT+AGG | + | chr4.2:31800737-31800756 | MS.gene83173:intron | 40.0% | |
| TAGGTGAAATGCTCAAAGCT+GGG | + | chr4.2:31800160-31800179 | MS.gene83173:CDS | 40.0% | |
| TATCCAATCCTGCAGTTCTA+TGG | - | chr4.2:31802099-31802118 | None:intergenic | 40.0% | |
| TCCATATCTATCCTGACCAT+TGG | + | chr4.2:31802303-31802322 | MS.gene83173:CDS | 40.0% | |
| TGGATGCTTATACAAGACCT+AGG | + | chr4.2:31800136-31800155 | MS.gene83173:CDS | 40.0% | |
| TGTAGCAACAACACTTCAGA+TGG | - | chr4.2:31802520-31802539 | None:intergenic | 40.0% | |
| TTCTCGTTCCCTTTATCCTT+TGG | + | chr4.2:31800921-31800940 | MS.gene83173:intron | 40.0% | |
| TTCTGCTATGACATAGTCCA+AGG | - | chr4.2:31801421-31801440 | None:intergenic | 40.0% | |
| ! | GGTTGACAGTCAACCTTTTT+GGG | - | chr4.2:31802205-31802224 | None:intergenic | 40.0% |
| !! | AATGTGAGAAAGCATCCACT+TGG | - | chr4.2:31802819-31802838 | None:intergenic | 40.0% |
| !! | CCTGTTTTGTTCTCCGAATA+TGG | + | chr4.2:31802866-31802885 | MS.gene83173:CDS | 40.0% |
| !! | TTGGTTTGGCAGTTCTTAGT+TGG | + | chr4.2:31803001-31803020 | MS.gene83173:CDS | 40.0% |
| !!! | ATGATTTTGGGATGGTACCA+TGG | + | chr4.2:31803044-31803063 | MS.gene83173:CDS | 40.0% |
| !!! | GTCAACCTTTTTGGGTCATT+AGG | - | chr4.2:31802197-31802216 | None:intergenic | 40.0% |
| !!! | TGATTTTGGGATGGTACCAT+GGG | + | chr4.2:31803045-31803064 | MS.gene83173:CDS | 40.0% |
| AAAACCTTCCCTTCTGTAGG+TGG | - | chr4.2:31802566-31802585 | None:intergenic | 45.0% | |
| AAAGGGGTCTCAGTTTGTGT+TGG | + | chr4.2:31800056-31800075 | MS.gene83173:CDS | 45.0% | |
| AATGCACTTCAGACTTCACC+TGG | + | chr4.2:31800237-31800256 | MS.gene83173:CDS | 45.0% | |
| ACGGTCCTAATGACCCAAAA+AGG | + | chr4.2:31802189-31802208 | MS.gene83173:CDS | 45.0% | |
| AGAGAACTCCACCTACAGAA+GGG | + | chr4.2:31802555-31802574 | MS.gene83173:intron | 45.0% | |
| AGGTGAAATGCTCAAAGCTG+GGG | + | chr4.2:31800161-31800180 | MS.gene83173:CDS | 45.0% | |
| AGTCAATCCCTTGTTGACCT+TGG | - | chr4.2:31803119-31803138 | None:intergenic | 45.0% | |
| CAGAAAACCTTCCCTTCTGT+AGG | - | chr4.2:31802569-31802588 | None:intergenic | 45.0% | |
| CAGACTAACCAAGGTCAACA+AGG | + | chr4.2:31803108-31803127 | MS.gene83173:CDS | 45.0% | |
| CGATGTGTCAGTGTATTGTC+CGG | - | chr4.2:31802404-31802423 | None:intergenic | 45.0% | |
| CGGTGTTTAACTGATCCTTC+TGG | + | chr4.2:31801893-31801912 | MS.gene83173:CDS | 45.0% | |
| CTCAAAGCTGGGGCTAAAAT+GGG | + | chr4.2:31800171-31800190 | MS.gene83173:CDS | 45.0% | |
| CTGGTCACTATTGGACTTGA+AGG | + | chr4.2:31802161-31802180 | MS.gene83173:CDS | 45.0% | |
| GAAGGATCAGTTAAACACCG+AGG | - | chr4.2:31801893-31801912 | None:intergenic | 45.0% | |
| GCAACAACACTTCAGATGGA+AGG | - | chr4.2:31802516-31802535 | None:intergenic | 45.0% | |
| GCTTATACAAGACCTAGGGT+AGG | + | chr4.2:31800141-31800160 | MS.gene83173:CDS | 45.0% | |
| GGGAACTGATCAATGAACCT+CGG | + | chr4.2:31801873-31801892 | MS.gene83173:CDS | 45.0% | |
| GTAGGTGAAATGCTCAAAGC+TGG | + | chr4.2:31800159-31800178 | MS.gene83173:CDS | 45.0% | |
| GTCAATGTACGCATCAGACA+CGG | + | chr4.2:31802484-31802503 | MS.gene83173:intron | 45.0% | |
| GTCAGGATAGATATGGACAG+AGG | - | chr4.2:31802300-31802319 | None:intergenic | 45.0% | |
| GTGACTCAACATGAAGATGC+AGG | + | chr4.2:31800887-31800906 | MS.gene83173:intron | 45.0% | |
| GTTCTTAGTTGGCGGAATGT+CGG | + | chr4.2:31803012-31803031 | MS.gene83173:CDS | 45.0% | |
| GTTTGGCAGTTCTTAGTTGG+CGG | + | chr4.2:31803004-31803023 | MS.gene83173:CDS | 45.0% | |
| TCTGCTAAGAAAAACCGGTC+CGG | + | chr4.2:31802968-31802987 | MS.gene83173:CDS | 45.0% | |
| TGCAAAGTTCAAATCCCCTC+CGG | - | chr4.2:31801131-31801150 | None:intergenic | 45.0% | |
| TGGTGAGATTCATTCGGGAA+GGG | + | chr4.2:31800595-31800614 | MS.gene83173:intron | 45.0% | |
| TTGAGCATTTCACCTACCCT+AGG | - | chr4.2:31800156-31800175 | None:intergenic | 45.0% | |
| TTGCCATAGAACTGCAGGAT+TGG | + | chr4.2:31802093-31802112 | MS.gene83173:intron | 45.0% | |
| TTGGTGAGATTCATTCGGGA+AGG | + | chr4.2:31800594-31800613 | MS.gene83173:intron | 45.0% | |
| TTTGAAGGGGGTTAAAGGAC+AGG | - | chr4.2:31801944-31801963 | None:intergenic | 45.0% | |
| ! | AGAAGCGCAAACACCATTTC+AGG | - | chr4.2:31800976-31800995 | None:intergenic | 45.0% |
| ! | ATTTTACAACTACCCCGGAG+GGG | + | chr4.2:31801114-31801133 | MS.gene83173:intron | 45.0% |
| ! | CATGTCATTTGGGGTAAGGA+TGG | + | chr4.2:31799996-31800015 | MS.gene83173:CDS | 45.0% |
| ! | CATTTTACAACTACCCCGGA+GGG | + | chr4.2:31801113-31801132 | MS.gene83173:intron | 45.0% |
| ! | GGGTTGACAGTCAACCTTTT+TGG | - | chr4.2:31802206-31802225 | None:intergenic | 45.0% |
| ! | TACATTGATGGCCTTTCCCA+TGG | - | chr4.2:31803064-31803083 | None:intergenic | 45.0% |
| ! | TCATTTTACAACTACCCCGG+AGG | + | chr4.2:31801112-31801131 | MS.gene83173:intron | 45.0% |
| !! | TGAAGCATTGACACAGACAC+CGG | + | chr4.2:31802382-31802401 | MS.gene83173:intron | 45.0% |
| !! | TTGAGGGTTTTATGGGTGAC+AGG | + | chr4.2:31801395-31801414 | MS.gene83173:intron | 45.0% |
| !! | TTTCGTGTCGGTAGCTCTTT+TGG | + | chr4.2:31801312-31801331 | MS.gene83173:intron | 45.0% |
| !!! | TTGCTTTTTGTTTTGCCGGC+CGG | + | chr4.2:31801701-31801720 | MS.gene83173:intron | 45.0% |
| !! | TTTAAATAAATATATTTGAA+GGG | - | chr4.2:31801958-31801977 | None:intergenic | 5.0% |
| AACTCCACCTACAGAAGGGA+AGG | + | chr4.2:31802559-31802578 | MS.gene83173:intron | 50.0% | |
| ATCAGTATGTTCAGTGGGCG+TGG | + | chr4.2:31801508-31801527 | MS.gene83173:CDS | 50.0% | |
| ATGTTTGCAGTCGTCGAGTC+TGG | + | chr4.2:31801743-31801762 | MS.gene83173:intron | 50.0% | |
| CAAAGTTCAAATCCCCTCCG+GGG | - | chr4.2:31801129-31801148 | None:intergenic | 50.0% | |
| CAGAGAACTCCACCTACAGA+AGG | + | chr4.2:31802554-31802573 | MS.gene83173:intron | 50.0% | |
| CTTCTGTAGGTGGAGTTCTC+TGG | - | chr4.2:31802556-31802575 | None:intergenic | 50.0% | |
| GCAAAGTTCAAATCCCCTCC+GGG | - | chr4.2:31801130-31801149 | None:intergenic | 50.0% | |
| GCTCAAAGCTGGGGCTAAAA+TGG | + | chr4.2:31800170-31800189 | MS.gene83173:CDS | 50.0% | |
| GGACAGGTGCATGACTTACT+TGG | - | chr4.2:31801928-31801947 | None:intergenic | 50.0% | |
| GGGTCTCAGTTTGTGTTGGA+TGG | + | chr4.2:31800060-31800079 | MS.gene83173:CDS | 50.0% | |
| TGACTGTCAACCCACCAGAA+GGG | + | chr4.2:31802213-31802232 | MS.gene83173:CDS | 50.0% | |
| TGTCGCAGACTATTCTGACC+AGG | + | chr4.2:31801798-31801817 | MS.gene83173:intron | 50.0% | |
| TTGACTGTCAACCCACCAGA+AGG | + | chr4.2:31802212-31802231 | MS.gene83173:CDS | 50.0% | |
| TTGGGATGGTACCATGGGAA+AGG | + | chr4.2:31803050-31803069 | MS.gene83173:CDS | 50.0% | |
| ! | GTTTTATGGGTGACAGGCCT+TGG | + | chr4.2:31801401-31801420 | MS.gene83173:intron | 50.0% |
| ! | TCGGTAGCTCTTTTGGTCCA+TGG | + | chr4.2:31801319-31801338 | MS.gene83173:intron | 50.0% |
| !! | ACTTGGAGAGTGTCACCAGA+AGG | - | chr4.2:31801911-31801930 | None:intergenic | 50.0% |
| !! | GAGAAAGCATCCACTTGGAG+AGG | - | chr4.2:31802814-31802833 | None:intergenic | 50.0% |
| AAGAAAAACCGGTCCGGAGC+AGG | + | chr4.2:31802974-31802993 | MS.gene83173:CDS | 55.0% | |
| TGACGCGACACTGACACATG+TGG | - | chr4.2:31802468-31802487 | None:intergenic | 55.0% | |
| TGTCAACCCACCAGAAGGGT+GGG | + | chr4.2:31802217-31802236 | MS.gene83173:CDS | 55.0% | |
| TTCAGTGGGCGTGGCAAGAA+GGG | + | chr4.2:31801517-31801536 | MS.gene83173:CDS | 55.0% | |
| ! | CCAAACCAAAGCACCTGCTC+CGG | - | chr4.2:31802990-31803009 | None:intergenic | 55.0% |
| !! | CACTTGAGGTGCTGGCTTAG+TGG | - | chr4.2:31801181-31801200 | None:intergenic | 55.0% |
| CCGGAGCAGGTGCTTTGGTT+TGG | + | chr4.2:31802987-31803006 | MS.gene83173:CDS | 60.0% | |
| CTGTCAACCCACCAGAAGGG+TGG | + | chr4.2:31802216-31802235 | MS.gene83173:CDS | 60.0% | |
| GTTCAGTGGGCGTGGCAAGA+AGG | + | chr4.2:31801516-31801535 | MS.gene83173:CDS | 60.0% | |
| TGGATGCCCACCCTTCTGGT+GGG | - | chr4.2:31802226-31802245 | None:intergenic | 60.0% | |
| AGCCTGGATGCCCACCCTTC+TGG | - | chr4.2:31802230-31802249 | None:intergenic | 65.0% | |
| CACCAGAAGGGTGGGCATCC+AGG | + | chr4.2:31802225-31802244 | MS.gene83173:CDS | 65.0% | |
| CTGGATGCCCACCCTTCTGG+TGG | - | chr4.2:31802227-31802246 | None:intergenic | 65.0% | |
| GAAGGGTGGGCATCCAGGCT+TGG | + | chr4.2:31802230-31802249 | MS.gene83173:CDS | 65.0% | |
| GGGCGTGGCAAGAAGGGCTA+GGG | + | chr4.2:31801523-31801542 | MS.gene83173:CDS | 65.0% | |
| TGGGCGTGGCAAGAAGGGCT+AGG | + | chr4.2:31801522-31801541 | MS.gene83173:CDS | 65.0% | |
| ! | CCAAAGCACCTGCTCCGGAC+CGG | - | chr4.2:31802985-31803004 | None:intergenic | 65.0% |
| CCGGTCCGGAGCAGGTGCTT+TGG | + | chr4.2:31802982-31803001 | MS.gene83173:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 31799931 | 31803171 | 31799931 | ID=MS.gene83173 |
| chr4.2 | mRNA | 31799931 | 31803171 | 31799931 | ID=MS.gene83173.t1;Parent=MS.gene83173 |
| chr4.2 | exon | 31799931 | 31800284 | 31799931 | ID=MS.gene83173.t1.exon1;Parent=MS.gene83173.t1 |
| chr4.2 | CDS | 31799931 | 31800284 | 31799931 | ID=cds.MS.gene83173.t1;Parent=MS.gene83173.t1 |
| chr4.2 | exon | 31801417 | 31801614 | 31801417 | ID=MS.gene83173.t1.exon2;Parent=MS.gene83173.t1 |
| chr4.2 | CDS | 31801417 | 31801614 | 31801417 | ID=cds.MS.gene83173.t1;Parent=MS.gene83173.t1 |
| chr4.2 | exon | 31801806 | 31801928 | 31801806 | ID=MS.gene83173.t1.exon3;Parent=MS.gene83173.t1 |
| chr4.2 | CDS | 31801806 | 31801928 | 31801806 | ID=cds.MS.gene83173.t1;Parent=MS.gene83173.t1 |
| chr4.2 | exon | 31802110 | 31802324 | 31802110 | ID=MS.gene83173.t1.exon4;Parent=MS.gene83173.t1 |
| chr4.2 | CDS | 31802110 | 31802324 | 31802110 | ID=cds.MS.gene83173.t1;Parent=MS.gene83173.t1 |
| chr4.2 | exon | 31802775 | 31803171 | 31802775 | ID=MS.gene83173.t1.exon5;Parent=MS.gene83173.t1 |
| chr4.2 | CDS | 31802775 | 31803171 | 31802775 | ID=cds.MS.gene83173.t1;Parent=MS.gene83173.t1 |
| Gene Sequence |
| Protein sequence |
