AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene83592

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene83592.t1 MTR_2g104960 97.368 342 8 1 1 341 1 342 0.0 683
MS.gene83592.t1 MTR_4g006940 80.781 333 61 2 7 336 3 335 0.0 545
MS.gene83592.t1 MTR_4g006940 81.655 278 49 1 7 282 3 280 1.79e-163 457
MS.gene83592.t1 MTR_4g006940 81.655 278 49 1 7 282 3 280 1.79e-163 457
MS.gene83592.t1 MTR_3g005210 46.605 324 164 6 14 330 1 322 2.76e-99 296
MS.gene83592.t1 MTR_3g005170 48.137 322 158 6 11 325 2 321 4.81e-99 296
MS.gene83592.t1 MTR_4g009040 46.708 319 161 3 15 328 9 323 1.67e-95 286
MS.gene83592.t1 MTR_5g072620 45.141 319 168 3 17 329 3 320 3.18e-95 286
MS.gene83592.t1 MTR_4g009040 46.130 323 161 3 15 328 9 327 8.07e-95 285
MS.gene83592.t1 MTR_4g077100 47.319 317 158 6 16 325 8 322 9.53e-93 280
MS.gene83592.t1 MTR_4g077130 46.417 321 163 7 12 325 2 320 2.11e-91 276
MS.gene83592.t1 MTR_8g062440 45.652 322 165 7 16 330 5 323 6.04e-89 270
MS.gene83592.t1 MTR_4g009690 47.022 319 160 3 15 328 9 323 2.91e-88 268
MS.gene83592.t1 MTR_4g009690 47.335 319 158 4 15 328 9 322 1.02e-87 267
MS.gene83592.t1 MTR_8g062440 45.511 323 165 8 16 330 5 324 5.75e-87 265
MS.gene83592.t1 MTR_3g005170 48.746 279 135 5 11 282 2 279 6.74e-87 263
MS.gene83592.t1 MTR_3g031650 43.354 316 172 3 17 326 3 317 9.32e-87 264
MS.gene83592.t1 MTR_8g062110 45.741 317 162 6 16 325 15 328 1.42e-86 264
MS.gene83592.t1 MTR_8g062110 45.741 317 162 6 16 325 6 319 1.48e-86 264
MS.gene83592.t1 MTR_5g056600 43.711 318 169 7 19 328 4 319 3.50e-86 263
MS.gene83592.t1 MTR_3g005170 44.025 318 146 6 11 325 2 290 8.13e-84 256
MS.gene83592.t1 MTR_4g077100 48.540 274 133 5 16 282 8 280 1.52e-81 249
MS.gene83592.t1 MTR_1g022440 41.846 325 171 12 17 328 6 325 6.71e-79 244
MS.gene83592.t1 MTR_3g031650 44.981 269 142 2 17 279 3 271 2.36e-78 241
MS.gene83592.t1 MTR_8g062440 47.826 276 135 6 16 284 5 278 1.55e-77 241
MS.gene83592.t1 MTR_2g028620 41.925 322 174 6 17 328 8 326 2.36e-77 240
MS.gene83592.t1 MTR_8g062110 47.080 274 136 5 16 282 6 277 1.22e-76 237
MS.gene83592.t1 MTR_2g101330 40.439 319 179 5 19 329 5 320 1.28e-76 238
MS.gene83592.t1 MTR_8g062110 47.080 274 136 5 16 282 6 277 1.37e-76 237
MS.gene83592.t1 MTR_1g022445 41.667 324 175 10 16 328 5 325 5.84e-76 237
MS.gene83592.t1 MTR_2g028620 43.223 273 143 5 17 279 8 278 2.71e-67 214
MS.gene83592.t1 MTR_4g092080 36.391 338 194 10 7 326 2 336 9.22e-57 187
MS.gene83592.t1 MTR_7g074730 36.615 325 187 13 19 328 8 328 3.29e-56 186
MS.gene83592.t1 MTR_7g074880 34.769 325 191 11 19 328 8 326 5.55e-56 185
MS.gene83592.t1 MTR_7g074820 36.810 326 186 13 19 328 8 329 4.89e-55 183
MS.gene83592.t1 MTR_4g081440 35.821 335 184 11 20 328 25 354 9.68e-52 175
MS.gene83592.t1 MTR_4g081440 35.329 334 186 10 20 328 21 349 1.10e-51 175
MS.gene83592.t1 MTR_7g074850 34.347 329 190 13 19 328 8 329 3.07e-51 173
MS.gene83592.t1 MTR_8g062110 41.071 224 127 4 104 325 13 233 1.19e-49 166
MS.gene83592.t1 MTR_7g074710 34.056 323 196 13 19 328 8 326 1.86e-46 160
MS.gene83592.t1 MTR_4g023730 33.231 325 201 10 18 328 7 329 8.92e-44 154
MS.gene83592.t1 MTR_5g029990 31.596 307 191 8 9 308 2 296 6.97e-42 147
MS.gene83592.t1 MTR_7g074870 33.216 283 172 10 58 328 11 288 6.84e-40 142
MS.gene83592.t1 MTR_8g062110 41.989 181 101 3 104 282 13 191 7.69e-40 139
MS.gene83592.t1 MTR_6g406250 32.653 294 183 6 19 301 55 344 1.58e-39 143
MS.gene83592.t1 MTR_0685s0030 43.750 160 88 2 166 325 2 159 4.63e-37 131
MS.gene83592.t1 MTR_2g013250 30.117 342 202 11 19 330 7 341 1.67e-33 127
MS.gene83592.t1 MTR_2g013230 28.947 342 206 11 19 330 8 342 9.13e-30 117
MS.gene83592.t1 MTR_7g117190 29.560 318 191 12 19 308 7 319 1.10e-29 116
MS.gene83592.t1 MTR_7g117190 30.450 289 171 11 19 279 7 293 3.72e-29 114
MS.gene83592.t1 MTR_6g406250 33.173 208 126 5 19 215 55 260 3.08e-27 108
MS.gene83592.t1 MTR_0164s0070 43.262 141 61 4 19 140 5 145 4.97e-27 106
MS.gene83592.t1 MTR_0685s0030 45.299 117 63 1 166 282 2 117 4.53e-26 100
MS.gene83592.t1 MTR_2g013260 28.571 322 188 11 19 308 8 319 8.25e-26 106
MS.gene83592.t1 MTR_2g013260 29.054 296 171 10 19 282 8 296 3.37e-25 103
MS.gene83592.t1 MTR_8g062710 46.067 89 34 2 19 103 20 98 7.00e-17 76.3
MS.gene83592.t1 MTR_3g011130 38.889 108 63 3 110 214 35 142 2.63e-16 75.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene83592.t1 AT1G15950 77.358 318 72 0 12 329 6 323 1.53e-179 501
MS.gene83592.t1 AT1G15950 77.358 318 72 0 12 329 6 323 1.53e-179 501
MS.gene83592.t1 AT1G80820 72.393 326 90 0 14 339 3 328 2.10e-174 487
MS.gene83592.t1 AT1G15950 77.524 307 69 0 12 318 6 312 5.49e-172 481
MS.gene83592.t1 AT1G15950 79.336 271 56 0 12 282 6 276 6.34e-152 428
MS.gene83592.t1 AT1G15950 78.545 275 59 0 12 286 6 280 8.23e-152 429
MS.gene83592.t1 AT1G15950 79.259 270 56 0 12 281 6 275 4.40e-151 426
MS.gene83592.t1 AT1G80820 75.093 269 67 0 14 282 3 271 6.27e-145 410
MS.gene83592.t1 AT1G15950 80.444 225 44 0 105 329 1 225 8.04e-124 356
MS.gene83592.t1 AT5G19440 48.916 323 156 6 11 326 2 322 1.40e-103 307
MS.gene83592.t1 AT1G51410 46.319 326 166 6 12 330 2 325 1.08e-94 285
MS.gene83592.t1 AT5G58490 46.082 319 165 3 17 329 7 324 1.84e-93 281
MS.gene83592.t1 AT2G02400 43.614 321 172 4 14 328 1 318 1.42e-90 274
MS.gene83592.t1 AT2G33590 47.910 311 152 5 19 323 9 315 2.69e-88 268
MS.gene83592.t1 AT1G09510 45.768 319 160 7 16 325 5 319 1.64e-86 263
MS.gene83592.t1 AT1G66800 47.205 322 147 10 16 325 5 315 1.02e-84 259
MS.gene83592.t1 AT1G09490 43.925 321 169 7 16 328 5 322 1.06e-82 254
MS.gene83592.t1 AT1G09480 43.827 324 165 8 16 328 5 322 2.23e-82 253
MS.gene83592.t1 AT1G09480 43.827 324 165 8 16 328 52 369 4.86e-82 254
MS.gene83592.t1 AT4G35420 42.767 318 172 7 19 329 8 322 5.69e-82 252
MS.gene83592.t1 AT1G68540 42.271 317 173 5 21 328 6 321 1.36e-81 251
MS.gene83592.t1 AT1G09500 43.034 323 166 8 16 325 5 322 5.79e-77 239
MS.gene83592.t1 AT1G76470 41.875 320 176 3 17 328 5 322 5.79e-75 234
MS.gene83592.t1 AT1G25460 40.317 315 180 4 21 328 6 319 4.02e-74 232
MS.gene83592.t1 AT2G33600 44.695 311 162 5 19 323 9 315 1.34e-72 228
MS.gene83592.t1 AT1G09500 45.290 276 134 7 16 279 5 275 3.77e-72 225
MS.gene83592.t1 AT5G42800 40.923 325 178 11 17 330 6 327 1.26e-70 225
MS.gene83592.t1 AT1G09490 41.404 285 157 6 51 328 10 291 1.07e-64 207
MS.gene83592.t1 AT1G09500 40.767 287 153 7 51 325 7 288 1.24e-58 191
MS.gene83592.t1 AT2G45400 36.086 327 190 10 19 328 40 364 8.43e-54 181
MS.gene83592.t1 AT4G27250 36.164 318 172 10 18 308 12 325 3.20e-53 179
MS.gene83592.t1 AT4G27250 36.452 310 172 10 18 308 12 315 7.17e-52 175
MS.gene83592.t1 AT2G45400 37.050 278 160 7 19 281 40 317 1.70e-49 168
MS.gene83592.t1 AT1G68540 38.389 211 128 2 119 328 5 214 1.84e-48 162
MS.gene83592.t1 AT2G23910 34.448 299 170 8 20 304 11 297 1.87e-48 165
MS.gene83592.t1 AT2G23910 34.783 276 155 7 20 282 11 274 1.92e-47 161
MS.gene83592.t1 AT1G61720 31.385 325 202 10 20 326 14 335 2.23e-47 163
MS.gene83592.t1 AT2G23910 35.636 275 149 7 20 278 11 273 2.35e-47 161
MS.gene83592.t1 AT4G30470 33.333 297 185 6 15 304 6 296 3.90e-43 151
MS.gene83592.t1 AT2G23910 35.000 260 144 7 58 304 16 263 1.66e-40 143
MS.gene83592.t1 AT2G45400 34.084 311 186 10 33 328 1 307 7.12e-40 143
MS.gene83592.t1 AT5G14700 33.333 309 176 11 19 304 55 356 2.63e-37 137
MS.gene83592.t1 AT2G45400 36.574 216 123 6 19 220 40 255 3.22e-33 124
MS.gene83592.t1 AT5G14700 35.455 220 122 7 19 223 55 269 2.12e-28 112
MS.gene83592.t1 AT4G33360 28.455 246 149 8 19 255 15 242 1.09e-18 85.5
MS.gene83592.t1 AT4G33360 28.455 246 149 8 19 255 3 230 1.29e-18 85.9
MS.gene83592.t1 AT4G33360 28.455 246 149 8 19 255 15 242 1.43e-18 85.9

Find 84 sgRNAs with CRISPR-Local

Find 223 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCGGTGGCTTCATCGCTTCT+TGG 0.240471 2.2:+1307728 MS.gene83592:CDS
GCAGAATCTTCCTCAATTTC+CGG 0.262911 2.2:+1307682 MS.gene83592:CDS
CTCAACATCAACACTCCTAT+TGG 0.285572 2.2:-1309450 None:intergenic
TATGAGAAACCTTCTGCTTC+TGG 0.292884 2.2:+1310267 MS.gene83592:CDS
GTGACTTACTTGGTAGGAAT+TGG 0.293032 2.2:-1310366 None:intergenic
ATCAATTGGCGCAGTCTATA+TGG 0.300091 2.2:+1309424 MS.gene83592:CDS
CACAAGCTTATGTTCATGTT+AGG 0.302408 2.2:+1310217 MS.gene83592:CDS
TCTAGAGAATCTTCTTTGTT+TGG 0.306818 2.2:-1311341 None:intergenic
TCCATTAACGGCTTCTTTAA+CGG 0.328595 2.2:-1308234 None:intergenic
TCCGTTAAAGAAGCCGTTAA+TGG 0.331782 2.2:+1308233 MS.gene83592:CDS
TCAACATCAACACTCCTATT+GGG 0.340370 2.2:-1309449 None:intergenic
TTCTTTGCTCCATTCACTGC+TGG 0.349124 2.2:-1309350 None:intergenic
ATTGTGCTTGCATTGATTGT+AGG 0.355496 2.2:-1310144 None:intergenic
AGTTGTAGTGAATCCAGTTT+TGG 0.358005 2.2:+1310101 MS.gene83592:CDS
AAAGGTGACCTTGGTCTTGT+AGG 0.380163 2.2:-1311313 None:intergenic
TTGAGGTTGATGAGTCTTGC+TGG 0.381677 2.2:+1309468 MS.gene83592:CDS
TGAGTCTTGCTGGAGTGATT+TGG 0.392451 2.2:+1309478 MS.gene83592:CDS
GAGAAAGGCTATACTGTTAG+AGG 0.399644 2.2:+1307769 MS.gene83592:CDS
TTGGTCTTGTAGGCTCTTAA+CGG 0.408849 2.2:-1311303 None:intergenic
CACATACTAAAGTACCTAAC+TGG 0.418602 2.2:+1310168 MS.gene83592:CDS
TTTGGACACACAGGAGGAAA+TGG 0.419258 2.2:+1309322 MS.gene83592:intron
TTGGATGGTTAAGCTCCTCT+TGG 0.431425 2.2:+1307747 MS.gene83592:CDS
CTTCTTTGTTTGGAATAGAA+AGG 0.435435 2.2:-1311331 None:intergenic
CAGTCTATATGGACCCCAAT+AGG 0.445142 2.2:+1309435 MS.gene83592:CDS
AATGGTCCAAGAACCAAAAC+TGG 0.452263 2.2:-1310114 None:intergenic
GCGGCGGCGGTGGTAGCAGC+AGG 0.455436 2.2:-1307661 None:intergenic
GGAAGATTCTGCGGCGGCGG+TGG 0.458764 2.2:-1307671 None:intergenic
TGGCTTCATCGCTTCTTGGA+TGG 0.463428 2.2:+1307732 MS.gene83592:CDS
TGACTTACTTGGTAGGAATT+GGG 0.464359 2.2:-1310365 None:intergenic
AAAACTGAAGGATTTGGGAT+TGG 0.468538 2.2:+1311247 MS.gene83592:CDS
TTGTAGAATTGGTACTGCTA+TGG 0.470187 2.2:+1310021 MS.gene83592:intron
ACAAGCTTATGTTCATGTTA+GGG 0.475300 2.2:+1310218 MS.gene83592:CDS
AGGTCTTAGCTGAACCAGTT+AGG 0.475944 2.2:-1310182 None:intergenic
GACACCATGACATCCATTAA+CGG 0.478255 2.2:-1308246 None:intergenic
AAATGGGCACTTGAAAGAGT+TGG 0.499323 2.2:+1308157 MS.gene83592:CDS
ATGGTGGAGCCAGCAGTGAA+TGG 0.499409 2.2:+1309341 MS.gene83592:CDS
CTGACGGGGTTATCTGTAAC+GGG 0.499421 2.2:-1308284 None:intergenic
TTGGTAGGAATTGGGTACTC+AGG 0.501534 2.2:-1310357 None:intergenic
AGCGATGAAGCCACCGGCGC+CGG 0.501975 2.2:-1307722 None:intergenic
TATGGTTTCGCCGGAAATTG+AGG 0.503195 2.2:-1307692 None:intergenic
ACCGGCGCCGGTGACACATA+TGG 0.505863 2.2:-1307710 None:intergenic
AGCAAAGGAAAGGCTAACTT+TGG 0.507447 2.2:+1308184 MS.gene83592:CDS
TGGGATGTGGCAAAAGAGAA+AGG 0.508276 2.2:+1310069 MS.gene83592:CDS
TGTAGAATTGGTACTGCTAT+GGG 0.509990 2.2:+1310022 MS.gene83592:intron
ACCATATGTGTCACCGGCGC+CGG 0.511679 2.2:+1307709 MS.gene83592:CDS
CTTTAACGGAGTTAAGATCA+AGG 0.524956 2.2:-1308220 None:intergenic
TGAGGAAGATTCTGCGGCGG+CGG 0.526567 2.2:-1307674 None:intergenic
TCATATAAACATTCACTCAC+TGG 0.528141 2.2:-1311278 None:intergenic
GTTAAGCTCCTCTTGGAGAA+AGG 0.529443 2.2:+1307754 MS.gene83592:CDS
TTATGTTCATGTTAGGGATG+TGG 0.538028 2.2:+1310224 MS.gene83592:CDS
GGGATGTGGCAAAAGAGAAA+GGG 0.541884 2.2:+1310070 MS.gene83592:CDS
AGTGGCTGAACAAGCAGCAT+GGG 0.546309 2.2:+1310050 MS.gene83592:CDS
ATATGTGTCACCGGCGCCGG+TGG 0.552094 2.2:+1307712 MS.gene83592:CDS
TTAAGAGTGACTTACTTGGT+AGG 0.563350 2.2:-1310372 None:intergenic
TGGTAGGAATTGGGTACTCA+GGG 0.564638 2.2:-1310356 None:intergenic
CAGTGGCTGAACAAGCAGCA+TGG 0.568830 2.2:+1310049 MS.gene83592:CDS
CCAAGAAGCGATGAAGCCAC+CGG 0.571020 2.2:-1307728 None:intergenic
GGCGAAACCATATGTGTCAC+CGG 0.572762 2.2:+1307703 MS.gene83592:CDS
GAAAGAGTTGGAAGGAGCAA+AGG 0.573174 2.2:+1308169 MS.gene83592:CDS
AGCTTGTGTTGCATTTGCAT+AGG 0.575371 2.2:-1310202 None:intergenic
TTGGAATAGAAAGGTGACCT+TGG 0.582400 2.2:-1311322 None:intergenic
GAAGCCGTTAATGGATGTCA+TGG 0.583328 2.2:+1308242 MS.gene83592:CDS
ACTGACGGGGTTATCTGTAA+CGG 0.589424 2.2:-1308285 None:intergenic
CAACATCAACACTCCTATTG+GGG 0.595944 2.2:-1309448 None:intergenic
CAATAGGAGTGTTGATGTTG+AGG 0.599834 2.2:+1309451 MS.gene83592:CDS
GGTGACACATATGGTTTCGC+CGG 0.608771 2.2:-1307701 None:intergenic
AGTTGGAAGGAGCAAAGGAA+AGG 0.610898 2.2:+1308174 MS.gene83592:CDS
AGAGGAACCTTGCGAAACCC+AGG 0.613164 2.2:+1307787 MS.gene83592:CDS
TGAACAAGCAGCATGGGATG+TGG 0.613682 2.2:+1310056 MS.gene83592:CDS
CAGTATAGCCTTTCTCCAAG+AGG 0.617628 2.2:-1307762 None:intergenic
GGACACACAGGAGGAAATGG+TGG 0.629666 2.2:+1309325 MS.gene83592:intron
TTGATTGTAGGTTGTAGCAA+TGG 0.640557 2.2:-1310132 None:intergenic
GAATTTCAACAAGCTCTCCA+CGG 0.644131 2.2:-1310320 None:intergenic
GGGCACTTGAAAGAGTTGGA+AGG 0.662593 2.2:+1308161 MS.gene83592:CDS
AAGTATCTACCAGAAGCAGA+AGG 0.665232 2.2:-1310276 None:intergenic
GGATGTGGCAAAAGAGAAAG+GGG 0.667382 2.2:+1310071 MS.gene83592:CDS
TGTGGCAAAAGAGAAAGGGG+TGG 0.680248 2.2:+1310074 MS.gene83592:CDS
GGAAATTGAGGAAGATTCTG+CGG 0.685599 2.2:-1307680 None:intergenic
AGAAGCAAAAGTGAGGCGCG+TGG 0.702036 2.2:+1309391 MS.gene83592:CDS
AATTGAGGAAGATTCTGCGG+CGG 0.716984 2.2:-1307677 None:intergenic
GTTAAGAGCCTACAAGACCA+AGG 0.728061 2.2:+1311305 MS.gene83592:CDS
CTGCTGCAGAAGCAAAAGTG+AGG 0.741203 2.2:+1309384 MS.gene83592:CDS
GCTGAAAGTTCACTTCACCG+TGG 0.785254 2.2:+1310303 MS.gene83592:CDS
GTACTGCTATGGGAAAGCAG+TGG 0.795137 2.2:+1310032 MS.gene83592:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATAATAATAATAATAATT+TGG + chr2.2:1310739-1310758 MS.gene83592:intron 0.0%
!! ATAAATTTAATAATTCCTTT+AGG - chr2.2:1310961-1310980 None:intergenic 10.0%
!! ATTAAATTTATAAAATCAAG+TGG + chr2.2:1310970-1310989 MS.gene83592:intron 10.0%
!! TATTTATGTGAATTAAATTA+AGG - chr2.2:1307836-1307855 None:intergenic 10.0%
!!! AATACTATTATTTTTCTTTT+TGG - chr2.2:1308403-1308422 None:intergenic 10.0%
!!! ATAACATTTAACTTTTTTAA+AGG - chr2.2:1308524-1308543 None:intergenic 10.0%
!!! ATATTTTTTTAATTCTAGAA+TGG + chr2.2:1311084-1311103 MS.gene83592:intron 10.0%
!!! TAACATTTAACTTTTTTAAA+GGG - chr2.2:1308523-1308542 None:intergenic 10.0%
!!! TATTGATTTTATTCTTTTTT+TGG + chr2.2:1310433-1310452 MS.gene83592:intron 10.0%
!! AAATTTGAATATTGTAGAAT+TGG + chr2.2:1310010-1310029 MS.gene83592:intron 15.0%
!! ATATAATATCTTAGATATGA+TGG - chr2.2:1308594-1308613 None:intergenic 15.0%
!! GAATGAAAAAAATTCAATTA+AGG - chr2.2:1308346-1308365 None:intergenic 15.0%
!! TAATTCAATGTAATTATATG+CGG - chr2.2:1307987-1308006 None:intergenic 15.0%
!! TCAAAAACATTTCATTTAAA+TGG - chr2.2:1310509-1310528 None:intergenic 15.0%
!!! AAATTTTACTATCTATGTAT+AGG + chr2.2:1308019-1308038 MS.gene83592:intron 15.0%
!!! AATTTACCATATTATTTTAG+AGG - chr2.2:1308652-1308671 None:intergenic 15.0%
!!! GTAAATTTTATCAAAAGAAA+TGG + chr2.2:1308665-1308684 MS.gene83592:intron 15.0%
!!! TATTATTTTTCTTTTTGGAT+TGG - chr2.2:1308398-1308417 None:intergenic 15.0%
!!! TTTGATTTGAATTCTTAATT+TGG + chr2.2:1309304-1309323 MS.gene83592:intron 15.0%
!! AAAATTAAATAAATGAAGGG+AGG - chr2.2:1309535-1309554 None:intergenic 20.0%
!! AAATAAAAAACTGAAGGATT+TGG + chr2.2:1311241-1311260 MS.gene83592:CDS 20.0%
!! AAATATGAATCAATCATGAT+TGG - chr2.2:1309654-1309673 None:intergenic 20.0%
!! AAATTAAATAAATGAAGGGA+GGG - chr2.2:1309534-1309553 None:intergenic 20.0%
!! AATAAAAAACTGAAGGATTT+GGG + chr2.2:1311242-1311261 MS.gene83592:CDS 20.0%
!! AATTTAATAATTCCTTTAGG+TGG - chr2.2:1310958-1310977 None:intergenic 20.0%
!! ACATTTCATTTAAATGGAAA+TGG - chr2.2:1310503-1310522 None:intergenic 20.0%
!!! CAAGGATTTTGATAATATTT+TGG + chr2.2:1310664-1310683 MS.gene83592:intron 20.0%
!!! CTCTATTTTTTTTTTTTGAG+AGG - chr2.2:1308722-1308741 None:intergenic 20.0%
!!! GTTTTAGTATTTTGCAATTT+TGG + chr2.2:1310556-1310575 MS.gene83592:intron 20.0%
!!! TCTTTTTAGGATAATAAATG+TGG + chr2.2:1308965-1308984 MS.gene83592:intron 20.0%
!!! TTAGATATGATGGAATTAAA+AGG - chr2.2:1308584-1308603 None:intergenic 20.0%
!!! TTCAAATCGCTTTTATTTTA+GGG - chr2.2:1309992-1310011 None:intergenic 20.0%
!!! TTTCAAATCGCTTTTATTTT+AGG - chr2.2:1309993-1310012 None:intergenic 20.0%
!!! TTTTTATTTGAGAAGATATG+TGG - chr2.2:1311230-1311249 None:intergenic 20.0%
!!! TTTTTTTGGCATATATATCA+TGG + chr2.2:1310447-1310466 MS.gene83592:intron 20.0%
! AAATGAATTAAAAACTGACG+GGG - chr2.2:1308301-1308320 None:intergenic 25.0%
! AATTAAATAAATGAAGGGAG+GGG - chr2.2:1309533-1309552 None:intergenic 25.0%
! ACTTTCGCATAAAATCAAAT+TGG - chr2.2:1309277-1309296 None:intergenic 25.0%
! AGTATTACAAGATTTGGATT+AGG + chr2.2:1309589-1309608 MS.gene83592:intron 25.0%
! ATGTCATGTGATTATTTGAA+CGG + chr2.2:1308900-1308919 MS.gene83592:intron 25.0%
! CCACATAAACAAATCAAATT+TGG - chr2.2:1310921-1310940 None:intergenic 25.0%
! CTTCTCAAATAAAAAACTGA+AGG + chr2.2:1311235-1311254 MS.gene83592:CDS 25.0%
! GAAATGAATTAAAAACTGAC+GGG - chr2.2:1308302-1308321 None:intergenic 25.0%
! GAAGAATAGAATAGAAATAG+AGG - chr2.2:1308324-1308343 None:intergenic 25.0%
! GGAAATGAATTAAAAACTGA+CGG - chr2.2:1308303-1308322 None:intergenic 25.0%
! TAACACGAAAACTAGTAAAA+GGG - chr2.2:1309127-1309146 None:intergenic 25.0%
! TTAACACGAAAACTAGTAAA+AGG - chr2.2:1309128-1309147 None:intergenic 25.0%
! TTGCAAAATACTAAAACTTG+TGG - chr2.2:1310553-1310572 None:intergenic 25.0%
! TTTAGACAACATGTATGATT+AGG - chr2.2:1311111-1311130 None:intergenic 25.0%
! TTTCAGATGATCCAAAAAAT+GGG + chr2.2:1308141-1308160 MS.gene83592:intron 25.0%
!! AAAAAACGAGTCTAAAATCT+AGG + chr2.2:1309703-1309722 MS.gene83592:intron 25.0%
!! AAGAGTATGTTGAAAAGAAT+TGG + chr2.2:1310884-1310903 MS.gene83592:intron 25.0%
!! ACATGAACTAGTTAATTTTG+AGG - chr2.2:1311163-1311182 None:intergenic 25.0%
!! ATAACGTTGTTGATAAGATT+AGG + chr2.2:1308056-1308075 MS.gene83592:intron 25.0%
!! TTTATTTGCTACTGATCAAT+AGG + chr2.2:1309552-1309571 MS.gene83592:intron 25.0%
!! TTTTCAATCTTCTCTTTCAA+AGG + chr2.2:1308370-1308389 MS.gene83592:intron 25.0%
!! TTTTCAGATGATCCAAAAAA+TGG + chr2.2:1308140-1308159 MS.gene83592:intron 25.0%
!!! AATTTTGAGGCTATGATTAA+AGG - chr2.2:1311150-1311169 None:intergenic 25.0%
!!! ACATAGCCTCTAAAATAATA+TGG + chr2.2:1308643-1308662 MS.gene83592:intron 25.0%
!!! AGTAGAATATTTTTTGTACC+TGG - chr2.2:1307808-1307827 None:intergenic 25.0%
!!! ATATTATTTTAGAGGCTATG+TGG - chr2.2:1308644-1308663 None:intergenic 25.0%
!!! CCAAATTTGATTTGTTTATG+TGG + chr2.2:1310918-1310937 MS.gene83592:intron 25.0%
!!! CTGTTATTATATTTTGACGT+GGG + chr2.2:1308086-1308105 MS.gene83592:intron 25.0%
!!! GTAGAATATTTTTTGTACCT+GGG - chr2.2:1307807-1307826 None:intergenic 25.0%
!!! TTTTTTAAGAGTGACTTACT+TGG - chr2.2:1310379-1310398 None:intergenic 25.0%
AATGTAATTATATGCGGCAT+CGG - chr2.2:1307981-1308000 None:intergenic 30.0%
ACAAGCTTATGTTCATGTTA+GGG + chr2.2:1310218-1310237 MS.gene83592:CDS 30.0%
ACGAAATACGTAGTATACTT+TGG - chr2.2:1310473-1310492 None:intergenic 30.0%
AGTATGTTGAAAAGAATTGG+TGG + chr2.2:1310887-1310906 MS.gene83592:intron 30.0%
ATAATTCCTTTAGGTGGAAA+TGG - chr2.2:1310952-1310971 None:intergenic 30.0%
ATCATGAATACCGAATATGT+TGG + chr2.2:1309897-1309916 MS.gene83592:intron 30.0%
ATCTAGATCCATTATAGTTG+GGG + chr2.2:1309799-1309818 MS.gene83592:intron 30.0%
CTTCCAAATAATATGCTCAT+GGG + chr2.2:1309212-1309231 MS.gene83592:intron 30.0%
GATCTAGATCCATTATAGTT+GGG + chr2.2:1309798-1309817 MS.gene83592:intron 30.0%
GTTGTATTACTCTCTATCTT+GGG + chr2.2:1308446-1308465 MS.gene83592:intron 30.0%
TAAAAAGAAGCAAGCAATCA+AGG - chr2.2:1308953-1308972 None:intergenic 30.0%
TCATATAAACATTCACTCAC+TGG - chr2.2:1311281-1311300 None:intergenic 30.0%
TCATGAATACCGAATATGTT+GGG + chr2.2:1309898-1309917 MS.gene83592:intron 30.0%
TCTAGAGAATCTTCTTTGTT+TGG - chr2.2:1311344-1311363 None:intergenic 30.0%
TCTTCCAAATAATATGCTCA+TGG + chr2.2:1309211-1309230 MS.gene83592:intron 30.0%
! AATTCTTAATTTGGACACAC+AGG + chr2.2:1309313-1309332 MS.gene83592:intron 30.0%
! CTTCTTTGTTTGGAATAGAA+AGG - chr2.2:1311334-1311353 None:intergenic 30.0%
! TTGATTGCTTGCTTCTTTTT+AGG + chr2.2:1308952-1308971 MS.gene83592:intron 30.0%
!! CATAGGAGTATTACAAGATT+TGG + chr2.2:1309583-1309602 MS.gene83592:intron 30.0%
!!! GCTGTTATTATATTTTGACG+TGG + chr2.2:1308085-1308104 MS.gene83592:intron 30.0%
!!! GCTTTTATTTTAGGGTTTAG+CGG - chr2.2:1309984-1310003 None:intergenic 30.0%
AATGTCTCTAGTAAGAAGGT+TGG - chr2.2:1309010-1309029 None:intergenic 35.0%
ACCAACTTCTTCCATGAATA+TGG + chr2.2:1311029-1311048 MS.gene83592:intron 35.0%
ACCAATTAGGTAAAGAGTCA+AGG + chr2.2:1310646-1310665 MS.gene83592:intron 35.0%
AGTCCCATGAGCATATTATT+TGG - chr2.2:1309218-1309237 None:intergenic 35.0%
ATCAATAGGACATAGGACAT+AGG + chr2.2:1309566-1309585 MS.gene83592:intron 35.0%
ATTTAGCATGCCCATATTCA+TGG - chr2.2:1311043-1311062 None:intergenic 35.0%
CACAAGCTTATGTTCATGTT+AGG + chr2.2:1310217-1310236 MS.gene83592:CDS 35.0%
CACACAAGTGCAAATATGTA+GGG - chr2.2:1309954-1309973 None:intergenic 35.0%
CATGAATACCGAATATGTTG+GGG + chr2.2:1309899-1309918 MS.gene83592:intron 35.0%
CATGTGATTATTTGAACGGA+TGG + chr2.2:1308904-1308923 MS.gene83592:intron 35.0%
CCAACTTCTTCCATGAATAT+GGG + chr2.2:1311030-1311049 MS.gene83592:intron 35.0%
CGATCTAGATCCATTATAGT+TGG + chr2.2:1309797-1309816 MS.gene83592:intron 35.0%
CGTTGTATTACTCTCTATCT+TGG + chr2.2:1308445-1308464 MS.gene83592:intron 35.0%
CTTTAACGGAGTTAAGATCA+AGG - chr2.2:1308223-1308242 None:intergenic 35.0%
TCAACATCAACACTCCTATT+GGG - chr2.2:1309452-1309471 None:intergenic 35.0%
TCACACAAGTGCAAATATGT+AGG - chr2.2:1309955-1309974 None:intergenic 35.0%
TCCATTAACGGCTTCTTTAA+CGG - chr2.2:1308237-1308256 None:intergenic 35.0%
TCCTTGACTCTTTACCTAAT+TGG - chr2.2:1310650-1310669 None:intergenic 35.0%
TCTAGGTGTCTGATATTGAT+TGG + chr2.2:1309720-1309739 MS.gene83592:intron 35.0%
TGACAATGTCTCTAGTAAGA+AGG - chr2.2:1309014-1309033 None:intergenic 35.0%
TGACTTACTTGGTAGGAATT+GGG - chr2.2:1310368-1310387 None:intergenic 35.0%
TGTAGAATTGGTACTGCTAT+GGG + chr2.2:1310022-1310041 MS.gene83592:intron 35.0%
TGTGATGTGAGTTACCAATT+AGG + chr2.2:1310633-1310652 MS.gene83592:intron 35.0%
TGTTGAAAAGAATTGGTGGA+TGG + chr2.2:1310891-1310910 MS.gene83592:intron 35.0%
TTAAGAGTGACTTACTTGGT+AGG - chr2.2:1310375-1310394 None:intergenic 35.0%
TTATGTTCATGTTAGGGATG+TGG + chr2.2:1310224-1310243 MS.gene83592:CDS 35.0%
TTGATTGTAGGTTGTAGCAA+TGG - chr2.2:1310135-1310154 None:intergenic 35.0%
TTGTAGAATTGGTACTGCTA+TGG + chr2.2:1310021-1310040 MS.gene83592:intron 35.0%
TTTAGTTGCCCCAACTATAA+TGG - chr2.2:1309810-1309829 None:intergenic 35.0%
TTTGGTATCATTACTCACGA+AGG + chr2.2:1310574-1310593 MS.gene83592:intron 35.0%
! AAAACTGAAGGATTTGGGAT+TGG + chr2.2:1311247-1311266 MS.gene83592:CDS 35.0%
! AATTGGTAACTCACATCACA+TGG - chr2.2:1310633-1310652 None:intergenic 35.0%
! AGTTCATGTTTTACACATGC+AGG + chr2.2:1311174-1311193 MS.gene83592:intron 35.0%
! AGTTGTAGTGAATCCAGTTT+TGG + chr2.2:1310101-1310120 MS.gene83592:CDS 35.0%
! CACATACTAAAGTACCTAAC+TGG + chr2.2:1310168-1310187 MS.gene83592:CDS 35.0%
! GTGGTTTTCACATCATCAAT+TGG + chr2.2:1309410-1309429 MS.gene83592:CDS 35.0%
!! AAGATATGTGGTTTTACTCG+AGG - chr2.2:1311218-1311237 None:intergenic 35.0%
!! AAGTTGGTGATAAGGACATT+GGG - chr2.2:1311017-1311036 None:intergenic 35.0%
!! ATTGTGCTTGCATTGATTGT+AGG - chr2.2:1310147-1310166 None:intergenic 35.0%
!!! TCTTTCAAGTGCCCATTTTT+TGG - chr2.2:1308155-1308174 None:intergenic 35.0%
AAATGGGCACTTGAAAGAGT+TGG + chr2.2:1308157-1308176 MS.gene83592:CDS 40.0%
AAGTATCTACCAGAAGCAGA+AGG - chr2.2:1310279-1310298 None:intergenic 40.0%
AATGGTCCAAGAACCAAAAC+TGG - chr2.2:1310117-1310136 None:intergenic 40.0%
ACACTTTGTCTTCGTCTAAG+TGG + chr2.2:1308615-1308634 MS.gene83592:intron 40.0%
AGAAGCAAGCAATCAAGGTT+TGG - chr2.2:1308948-1308967 None:intergenic 40.0%
AGCAAAGGAAAGGCTAACTT+TGG + chr2.2:1308184-1308203 MS.gene83592:CDS 40.0%
AGCTTGTGTTGCATTTGCAT+AGG - chr2.2:1310205-1310224 None:intergenic 40.0%
AGTGATATGTTGTCACTCCT+AGG + chr2.2:1310787-1310806 MS.gene83592:intron 40.0%
ATCAATTGGCGCAGTCTATA+TGG + chr2.2:1309424-1309443 MS.gene83592:CDS 40.0%
CAACATCAACACTCCTATTG+GGG - chr2.2:1309451-1309470 None:intergenic 40.0%
CAGATACACCCCAACATATT+CGG - chr2.2:1309910-1309929 None:intergenic 40.0%
CCCATATTCATGGAAGAAGT+TGG - chr2.2:1311033-1311052 None:intergenic 40.0%
CTCAACATCAACACTCCTAT+TGG - chr2.2:1309453-1309472 None:intergenic 40.0%
GAATTTCAACAAGCTCTCCA+CGG - chr2.2:1310323-1310342 None:intergenic 40.0%
GACACCATGACATCCATTAA+CGG - chr2.2:1308249-1308268 None:intergenic 40.0%
GAGAAAGGCTATACTGTTAG+AGG + chr2.2:1307769-1307788 MS.gene83592:CDS 40.0%
GCAGAATCTTCCTCAATTTC+CGG + chr2.2:1307682-1307701 MS.gene83592:CDS 40.0%
GCTACTGATCAATAGGACAT+AGG + chr2.2:1309559-1309578 MS.gene83592:intron 40.0%
GGAAATTGAGGAAGATTCTG+CGG - chr2.2:1307683-1307702 None:intergenic 40.0%
GTGACTTACTTGGTAGGAAT+TGG - chr2.2:1310369-1310388 None:intergenic 40.0%
TACGTTCCATTTCCACCTAA+AGG + chr2.2:1310943-1310962 MS.gene83592:intron 40.0%
TATGAGAAACCTTCTGCTTC+TGG + chr2.2:1310267-1310286 MS.gene83592:CDS 40.0%
TCATTACTCACGAAGGTTAC+TGG + chr2.2:1310581-1310600 MS.gene83592:intron 40.0%
TCCGTTAAAGAAGCCGTTAA+TGG + chr2.2:1308233-1308252 MS.gene83592:CDS 40.0%
TGATTATTTGAACGGATGGC+AGG + chr2.2:1308908-1308927 MS.gene83592:intron 40.0%
TTGGAATAGAAAGGTGACCT+TGG - chr2.2:1311325-1311344 None:intergenic 40.0%
! GGAATTTTGCAAGAACACCA+AGG + chr2.2:1309499-1309518 MS.gene83592:CDS 40.0%
! TCTTAATTTGGACACACAGG+AGG + chr2.2:1309316-1309335 MS.gene83592:intron 40.0%
!! AGTTGGTGATAAGGACATTG+GGG - chr2.2:1311016-1311035 None:intergenic 40.0%
!! CAATAGGAGTGTTGATGTTG+AGG + chr2.2:1309451-1309470 MS.gene83592:CDS 40.0%
!! CATGGAAGAAGTTGGTGATA+AGG - chr2.2:1311025-1311044 None:intergenic 40.0%
!! GAAGTTGGTGATAAGGACAT+TGG - chr2.2:1311018-1311037 None:intergenic 40.0%
!! TTGGTCTTGTAGGCTCTTAA+CGG - chr2.2:1311306-1311325 None:intergenic 40.0%
!!! GTGAATCCAGTTTTGGTTCT+TGG + chr2.2:1310108-1310127 MS.gene83592:CDS 40.0%
AACCAACCACCAATGTTCCT+AGG - chr2.2:1310807-1310826 None:intergenic 45.0%
AATTGAGGAAGATTCTGCGG+CGG - chr2.2:1307680-1307699 None:intergenic 45.0%
ACTGACGGGGTTATCTGTAA+CGG - chr2.2:1308288-1308307 None:intergenic 45.0%
AGCAAGCAATCAAGGTTTGG+TGG - chr2.2:1308945-1308964 None:intergenic 45.0%
AGGTCTTAGCTGAACCAGTT+AGG - chr2.2:1310185-1310204 None:intergenic 45.0%
AGTTGGAAGGAGCAAAGGAA+AGG + chr2.2:1308174-1308193 MS.gene83592:CDS 45.0%
CAGTATAGCCTTTCTCCAAG+AGG - chr2.2:1307765-1307784 None:intergenic 45.0%
CAGTCTATATGGACCCCAAT+AGG + chr2.2:1309435-1309454 MS.gene83592:CDS 45.0%
GAAAGAGTTGGAAGGAGCAA+AGG + chr2.2:1308169-1308188 MS.gene83592:CDS 45.0%
GGATGTGGCAAAAGAGAAAG+GGG + chr2.2:1310071-1310090 MS.gene83592:CDS 45.0%
GGGATGTGGCAAAAGAGAAA+GGG + chr2.2:1310070-1310089 MS.gene83592:CDS 45.0%
GTTAAGAGCCTACAAGACCA+AGG + chr2.2:1311305-1311324 MS.gene83592:CDS 45.0%
GTTAAGCTCCTCTTGGAGAA+AGG + chr2.2:1307754-1307773 MS.gene83592:CDS 45.0%
GTTGTCACTCCTAGGAACAT+TGG + chr2.2:1310795-1310814 MS.gene83592:intron 45.0%
TATGGTTTCGCCGGAAATTG+AGG - chr2.2:1307695-1307714 None:intergenic 45.0%
TGAGTCTTGCTGGAGTGATT+TGG + chr2.2:1309478-1309497 MS.gene83592:CDS 45.0%
TGGGATGTGGCAAAAGAGAA+AGG + chr2.2:1310069-1310088 MS.gene83592:CDS 45.0%
TGGTAGGAATTGGGTACTCA+GGG - chr2.2:1310359-1310378 None:intergenic 45.0%
TTCTTTGCTCCATTCACTGC+TGG - chr2.2:1309353-1309372 None:intergenic 45.0%
TTGGATGGTTAAGCTCCTCT+TGG + chr2.2:1307747-1307766 MS.gene83592:CDS 45.0%
TTGGTAGGAATTGGGTACTC+AGG - chr2.2:1310360-1310379 None:intergenic 45.0%
TTTGGACACACAGGAGGAAA+TGG + chr2.2:1309322-1309341 MS.gene83592:intron 45.0%
! GAAGCCGTTAATGGATGTCA+TGG + chr2.2:1308242-1308261 MS.gene83592:CDS 45.0%
! TAGGAACATTGGTGGTTGGT+TGG + chr2.2:1310806-1310825 MS.gene83592:intron 45.0%
! TTTTGTACCTGGGTTTCGCA+AGG - chr2.2:1307797-1307816 None:intergenic 45.0%
!! AAAGGTGACCTTGGTCTTGT+AGG - chr2.2:1311316-1311335 None:intergenic 45.0%
!! CAAGGTTTGGTGGTGAGAAT+AGG - chr2.2:1308935-1308954 None:intergenic 45.0%
!! TAAGGACATTGGGGTTGGTA+AGG - chr2.2:1311007-1311026 None:intergenic 45.0%
!! TTGAGGTTGATGAGTCTTGC+TGG + chr2.2:1309468-1309487 MS.gene83592:CDS 45.0%
!! AAATAAAATTAAATAAATGA+AGG - chr2.2:1309539-1309558 None:intergenic 5.0%
!! AATAAAATTAAATAAATGAA+GGG - chr2.2:1309538-1309557 None:intergenic 5.0%
!!! AAAAAAATATAAAGTTTTAT+TGG - chr2.2:1311074-1311093 None:intergenic 5.0%
!!! TTTTTATTTATTTTTATTTG+TGG + chr2.2:1308806-1308825 MS.gene83592:intron 5.0%
AGGGAGGGGAATATTGACCT+TGG - chr2.2:1309519-1309538 None:intergenic 50.0%
AGTGGCTGAACAAGCAGCAT+GGG + chr2.2:1310050-1310069 MS.gene83592:CDS 50.0%
CTGACGGGGTTATCTGTAAC+GGG - chr2.2:1308287-1308306 None:intergenic 50.0%
CTGCTGCAGAAGCAAAAGTG+AGG + chr2.2:1309384-1309403 MS.gene83592:CDS 50.0%
GCTGAAAGTTCACTTCACCG+TGG + chr2.2:1310303-1310322 MS.gene83592:CDS 50.0%
GGCGAAACCATATGTGTCAC+CGG + chr2.2:1307703-1307722 MS.gene83592:CDS 50.0%
GGGCACTTGAAAGAGTTGGA+AGG + chr2.2:1308161-1308180 MS.gene83592:CDS 50.0%
GGTGACACATATGGTTTCGC+CGG - chr2.2:1307704-1307723 None:intergenic 50.0%
GGTGATAAGGACATTGGGGT+TGG - chr2.2:1311012-1311031 None:intergenic 50.0%
GTACTGCTATGGGAAAGCAG+TGG + chr2.2:1310032-1310051 MS.gene83592:CDS 50.0%
GTCACTCCTAGGAACATTGG+TGG + chr2.2:1310798-1310817 MS.gene83592:intron 50.0%
TGAACAAGCAGCATGGGATG+TGG + chr2.2:1310056-1310075 MS.gene83592:CDS 50.0%
TGGCTTCATCGCTTCTTGGA+TGG + chr2.2:1307732-1307751 MS.gene83592:CDS 50.0%
TGTGGCAAAAGAGAAAGGGG+TGG + chr2.2:1310074-1310093 MS.gene83592:CDS 50.0%
! CTCCTAGGAACATTGGTGGT+TGG + chr2.2:1310802-1310821 MS.gene83592:intron 50.0%
AGAAGCAAAAGTGAGGCGCG+TGG + chr2.2:1309391-1309410 MS.gene83592:CDS 55.0%
AGAGGAACCTTGCGAAACCC+AGG + chr2.2:1307787-1307806 MS.gene83592:CDS 55.0%
CAGTGGCTGAACAAGCAGCA+TGG + chr2.2:1310049-1310068 MS.gene83592:CDS 55.0%
CCAAGAAGCGATGAAGCCAC+CGG - chr2.2:1307731-1307750 None:intergenic 55.0%
GGACACACAGGAGGAAATGG+TGG + chr2.2:1309325-1309344 MS.gene83592:intron 55.0%
! ATGGTGGAGCCAGCAGTGAA+TGG + chr2.2:1309341-1309360 MS.gene83592:CDS 55.0%
ACCATATGTGTCACCGGCGC+CGG + chr2.2:1307709-1307728 MS.gene83592:CDS 60.0%
CCGGTGGCTTCATCGCTTCT+TGG + chr2.2:1307728-1307747 MS.gene83592:CDS 60.0%
TGAGGAAGATTCTGCGGCGG+CGG - chr2.2:1307677-1307696 None:intergenic 60.0%
!! GCGGCATCGGTGTCACGTAT+CGG - chr2.2:1307968-1307987 None:intergenic 60.0%
! ATATGTGTCACCGGCGCCGG+TGG + chr2.2:1307712-1307731 MS.gene83592:CDS 65.0%
!! ACCGGCGCCGGTGACACATA+TGG - chr2.2:1307713-1307732 None:intergenic 65.0%
AGCGATGAAGCCACCGGCGC+CGG - chr2.2:1307725-1307744 None:intergenic 70.0%
GGAAGATTCTGCGGCGGCGG+TGG - chr2.2:1307674-1307693 None:intergenic 70.0%
! GCGGCGGCGGTGGTAGCAGC+AGG - chr2.2:1307664-1307683 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 1307658 1311376 1307658 ID=MS.gene83592
chr2.2 mRNA 1307658 1311376 1307658 ID=MS.gene83592.t1;Parent=MS.gene83592
chr2.2 exon 1307658 1307808 1307658 ID=MS.gene83592.t1.exon1;Parent=MS.gene83592.t1
chr2.2 CDS 1307658 1307808 1307658 ID=cds.MS.gene83592.t1;Parent=MS.gene83592.t1
chr2.2 exon 1308147 1308301 1308147 ID=MS.gene83592.t1.exon2;Parent=MS.gene83592.t1
chr2.2 CDS 1308147 1308301 1308147 ID=cds.MS.gene83592.t1;Parent=MS.gene83592.t1
chr2.2 exon 1309335 1309520 1309335 ID=MS.gene83592.t1.exon3;Parent=MS.gene83592.t1
chr2.2 CDS 1309335 1309520 1309335 ID=cds.MS.gene83592.t1;Parent=MS.gene83592.t1
chr2.2 exon 1310027 1310379 1310027 ID=MS.gene83592.t1.exon4;Parent=MS.gene83592.t1
chr2.2 CDS 1310027 1310379 1310027 ID=cds.MS.gene83592.t1;Parent=MS.gene83592.t1
chr2.2 exon 1311196 1311376 1311196 ID=MS.gene83592.t1.exon5;Parent=MS.gene83592.t1
chr2.2 CDS 1311196 1311376 1311196 ID=cds.MS.gene83592.t1;Parent=MS.gene83592.t1
Gene Sequence

>MS.gene83592

ATGCCTGCTGCTACCACCGCCGCCGCAGAATCTTCCTCAATTTCCGGCGAAACCATATGTGTCACCGGCGCCGGTGGCTTCATCGCTTCTTGGATGGTTAAGCTCCTCTTGGAGAAAGGCTATACTGTTAGAGGAACCTTGCGAAACCCAGGTACAAAAAATATTCTACTTAATTCCTTAATTTAATTCACATAAATAATATCTTAATTGTGTTTTAATTTTATGATATCATGAAAAGATCATGTTGAGATCATCATACAAAATATTAGTTAGTTGTATACAACTATAGTCATGATATTTAGAGTGTCCGATACGTGACACCGATGCCGCATATAATTACATTGAATTACGTATTGTCACAAAATTTTACTATCTATGTATAGGTTCATGTTGAAATAATAACGTTGTTGATAAGATTAGGTGAATTGCTGTTATTATATTTTGACGTGGGAATGAATGAAATTTGATATAAATGAATTAATTTTTCAGATGATCCAAAAAATGGGCACTTGAAAGAGTTGGAAGGAGCAAAGGAAAGGCTAACTTTGGTCAAAGTTGATCTCCTTGATCTTAACTCCGTTAAAGAAGCCGTTAATGGATGTCATGGTGTCTTTCACACTGCTTCTCCCGTTACAGATAACCCCGTCAGTTTTTAATTCATTTCCTCTATTTCTATTCTATTCTTCCTTAATTGAATTTTTTTCATTCTTAATTTTCAATCTTCTCTTTCAAAGGATCCAATCCAAAAAGAAAAATAATAGTATTACTCTCTATCTTTTTTTTTTGACGTTGTATTACTCTCTATCTTGGGAGATGAATGTCATATTTGTAAAAAGTACATTTCAAAATAAAACGTCATTTTCCCTTTAAAAAAGTTAAATGTTATTTACTCTTTTTAGTATAAATAATATTGATTATTTTTTCCTTTTAATTCCATCATATCTAAGATATTATATTACACTTTGTCTTCGTCTAAGTGGTGACCACATAGCCTCTAAAATAATATGGTAAATTTTATCAAAAGAAATGGCGAATAGTTAAATACAAATAGAGTAATTTTACCTCTCAAAAAAAAAAAATAGAGTAATTTTAGTTTTTTTTTTGTTTTGAAAGTAGTAATTTTAGTTATTTTTCTTTCGTTTATAATTTTTTTATTTATTTTTATTTGTGGATGATAAGTTACATATATAGTTTGTCAAAAAAAAAAAAAAGTAACATATATAGTAGCATTGACACAAAATCATGTCATGTGATTATTTGAACGGATGGCAGGTCCTATTCTCACCACCAAACCTTGATTGCTTGCTTCTTTTTAGGATAATAAATGTGGCATGTGAATTTCATAATGACCAACCTTCTTACTAGAGACATTGTCAAAAAAAAAAAAAAAATTTGTTAGAGAAATGAATTTTGCACGACGATTTTGTGCAACTCTGTTTTTTATATTCTAATTGTTTTCTTACTGTCCCTTTTACTAGTTTTCGTGTTAATGTCTATATTTTTTTTTATATATTTATAACTTGTCTAAAAAATGATTATTCAAATAAGATAGCTCTTCCAAATAATATGCTCATGGGACTATTATTCTATTTATTTTAAATTTCAATTGCAAACTACCAATTTGATTTTATGCGAAAGTTATTGAATTTGATTTGAATTCTTAATTTGGACACACAGGAGGAAATGGTGGAGCCAGCAGTGAATGGAGCAAAGAATGTGATCATAGCTGCTGCAGAAGCAAAAGTGAGGCGCGTGGTTTTCACATCATCAATTGGCGCAGTCTATATGGACCCCAATAGGAGTGTTGATGTTGAGGTTGATGAGTCTTGCTGGAGTGATTTGGAATTTTGCAAGAACACCAAGGTCAATATTCCCCTCCCTTCATTTATTTAATTTTATTTGCTACTGATCAATAGGACATAGGACATAGGAGTATTACAAGATTTGGATTAGGTACAACGTGACAACATGCAGTTACACACATTTAGATCGTCCAATCATGATTGATTCATATTTAAAGCAAATTTTGATTTTCTTTAAATTTTAAAAAACGAGTCTAAAATCTAGGTGTCTGATATTGATTGGACAACTAAGATACGTGTGACTGCATGCATGCAGTCATATGATTGTGATAGAACACGATCTAGATCCATTATAGTTGGGGCAACTAAATACATTTTAAGTTTTGATAAATGCGATTGATTTTAGTCTCGTAAGTGCAATTCAAATTATAAAATGCATCATGAATACCGAATATGTTGGGGTGTATCTGTGTAAGTTTGAACACATGATACCCTACATATTTGCACTTGTGTGAGTTTTGCCGCTAAACCCTAAAATAAAAGCGATTTGAAATTTGAATATTGTAGAATTGGTACTGCTATGGGAAAGCAGTGGCTGAACAAGCAGCATGGGATGTGGCAAAAGAGAAAGGGGTGGATTTAGTTGTAGTGAATCCAGTTTTGGTTCTTGGACCATTGCTACAACCTACAATCAATGCAAGCACAATTCACATACTAAAGTACCTAACTGGTTCAGCTAAGACCTATGCAAATGCAACACAAGCTTATGTTCATGTTAGGGATGTGGCATTAGCTCACATACTTGTTTATGAGAAACCTTCTGCTTCTGGTAGATACTTATGTGCTGAAAGTTCACTTCACCGTGGAGAGCTTGTTGAAATTCTTGCTAAGTATTTCCCTGAGTACCCAATTCCTACCAAGTAAGTCACTCTTAAAAAAAAGTCACTTTTAAATTATTCTTGTACATTAAACTTATTGATTTTATTCTTTTTTTGGCATATATATCATGGCCAAAGTATACTACGTATTTCGTTATTTTTCCATTTCCATTTAAATGAAATGTTTTTGACATTCGTAATAGATACACTAACCACAAGTTTTAGTATTTTGCAATTTTGGTATCATTACTCACGAAGGTTACTGGAAAATGACATCTGTTAGTACTAGTAGCCATGTGATGTGAGTTACCAATTAGGTAAAGAGTCAAGGATTTTGATAATATTTTGGTCTCATTCATTGCTTAATAATAATAATAATATTATAATAATAATAATAATAATAATAATAATAATAATAATTTGGCTATTTTTCAATATAATAATCATGCAGTGATATGTTGTCACTCCTAGGAACATTGGTGGTTGGTTGGTTAAACACTTTATTTTGTAAGATGTAGAATAAAATGAAAATATGTAAAATGTTGAAAGAGTATGTTGAAAAGAATTGGTGGATGGTATACCAAATTTGATTTGTTTATGTGGTCTACGTTCCATTTCCACCTAAAGGAATTATTAAATTTATAAAATCAAGTGGAGCATATGAGTCCTTACCAACCCCAATGTCCTTATCACCAACTTCTTCCATGAATATGGGCATGCTAAATCATTAATGCCAATAAAACTTTATATTTTTTTAATTCTAGAATGGTCCTAATCATACATGTTGTCTAAATGTAATAATATTTTGACCTTTAATCATAGCCTCAAAATTAACTAGTTCATGTTTTACACATGCAGGTGTTCAGATGAAAAGAATCCTCGAGTAAAACCACATATCTTCTCAAATAAAAAACTGAAGGATTTGGGATTGGAGTTCACTCCAGTGAGTGAATGTTTATATGAAACCGTTAAGAGCCTACAAGACCAAGGTCACCTTTCTATTCCAAACAAAGAAGATTCTCTAGAAGTCAAATCCTAA
Protein sequence

>MS.gene83592.t1

MPAATTAAAESSSISGETICVTGAGGFIASWMVKLLLEKGYTVRGTLRNPDDPKNGHLKELEGAKERLTLVKVDLLDLNSVKEAVNGCHGVFHTASPVTDNPEEMVEPAVNGAKNVIIAAAEAKVRRVVFTSSIGAVYMDPNRSVDVEVDESCWSDLEFCKNTKNWYCYGKAVAEQAAWDVAKEKGVDLVVVNPVLVLGPLLQPTINASTIHILKYLTGSAKTYANATQAYVHVRDVALAHILVYEKPSASGRYLCAESSLHRGELVEILAKYFPEYPIPTKCSDEKNPRVKPHIFSNKKLKDLGLEFTPVSECLYETVKSLQDQGHLSIPNKEDSLEVKS