Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83724.t1 | XP_013442399.1 | 97.1 | 441 | 13 | 0 | 3 | 443 | 31 | 471 | 9.40E-265 | 922.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83724.t1 | Q09131 | 83.0 | 441 | 75 | 0 | 3 | 443 | 24 | 464 | 9.0e-232 | 803.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83724.t1 | A0A072TFW4 | 97.1 | 441 | 13 | 0 | 3 | 443 | 31 | 471 | 6.8e-265 | 922.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene83724 | MS.gene036701 | PPI |
| MS.gene83724 | MS.gene58017 | PPI |
| MS.gene83724 | MS.gene58016 | PPI |
| MS.gene83724 | MS.gene58198 | PPI |
| MS.gene83724 | MS.gene58221 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83724.t1 | MTR_0188s0020 | 97.052 | 441 | 13 | 0 | 3 | 443 | 31 | 471 | 0.0 | 898 |
| MS.gene83724.t1 | MTR_4g037105 | 87.045 | 440 | 57 | 0 | 4 | 443 | 26 | 465 | 0.0 | 816 |
| MS.gene83724.t1 | MTR_1g112630 | 83.484 | 442 | 72 | 1 | 3 | 443 | 26 | 467 | 0.0 | 786 |
| MS.gene83724.t1 | MTR_4g115670 | 61.072 | 429 | 164 | 2 | 4 | 431 | 26 | 452 | 0.0 | 551 |
| MS.gene83724.t1 | MTR_3g051240 | 45.063 | 395 | 189 | 10 | 33 | 426 | 43 | 410 | 3.63e-103 | 314 |
| MS.gene83724.t1 | MTR_5g092360 | 41.809 | 409 | 210 | 9 | 33 | 440 | 49 | 430 | 7.78e-101 | 308 |
| MS.gene83724.t1 | MTR_1g060360 | 42.025 | 395 | 202 | 8 | 33 | 426 | 46 | 414 | 9.86e-97 | 297 |
| MS.gene83724.t1 | MTR_7g104360 | 42.118 | 406 | 205 | 11 | 31 | 433 | 45 | 423 | 3.60e-96 | 296 |
| MS.gene83724.t1 | MTR_7g104330 | 41.266 | 395 | 205 | 8 | 33 | 426 | 54 | 422 | 9.12e-95 | 293 |
| MS.gene83724.t1 | MTR_3g083810 | 37.562 | 402 | 176 | 9 | 87 | 429 | 143 | 528 | 5.22e-76 | 247 |
| MS.gene83724.t1 | MTR_3g083820 | 37.065 | 402 | 178 | 8 | 87 | 429 | 143 | 528 | 3.61e-75 | 244 |
| MS.gene83724.t1 | MTR_7g056403 | 35.092 | 436 | 201 | 10 | 60 | 429 | 108 | 527 | 2.30e-74 | 243 |
| MS.gene83724.t1 | MTR_6g013050 | 31.579 | 513 | 249 | 14 | 16 | 442 | 54 | 550 | 9.65e-73 | 239 |
| MS.gene83724.t1 | MTR_6g013050 | 31.453 | 461 | 224 | 12 | 16 | 400 | 54 | 498 | 2.49e-65 | 219 |
| MS.gene83724.t1 | MTR_4g037670 | 27.494 | 411 | 228 | 18 | 33 | 395 | 216 | 604 | 6.99e-27 | 114 |
| MS.gene83724.t1 | MTR_1g052505 | 26.142 | 394 | 213 | 16 | 31 | 369 | 192 | 562 | 7.09e-26 | 110 |
| MS.gene83724.t1 | MTR_4g082930 | 26.126 | 444 | 259 | 15 | 32 | 418 | 143 | 574 | 2.17e-23 | 103 |
| MS.gene83724.t1 | MTR_3g074930 | 26.923 | 364 | 219 | 15 | 91 | 421 | 256 | 605 | 9.02e-23 | 101 |
| MS.gene83724.t1 | MTR_3g074930 | 26.374 | 364 | 221 | 14 | 91 | 421 | 249 | 598 | 9.32e-23 | 101 |
| MS.gene83724.t1 | MTR_4g103520 | 27.224 | 371 | 209 | 17 | 91 | 421 | 176 | 525 | 3.46e-22 | 99.4 |
| MS.gene83724.t1 | MTR_4g103520 | 27.224 | 371 | 209 | 17 | 91 | 421 | 253 | 602 | 4.07e-22 | 99.8 |
| MS.gene83724.t1 | MTR_5g045600 | 26.400 | 375 | 207 | 15 | 91 | 421 | 245 | 594 | 2.54e-21 | 97.1 |
| MS.gene83724.t1 | MTR_8g063080 | 25.683 | 366 | 221 | 14 | 91 | 421 | 238 | 587 | 8.53e-21 | 95.5 |
| MS.gene83724.t1 | MTR_4g082940 | 23.611 | 432 | 269 | 17 | 33 | 418 | 144 | 560 | 1.63e-12 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83724.t1 | AT2G16430 | 78.341 | 434 | 94 | 0 | 4 | 437 | 30 | 463 | 0.0 | 727 |
| MS.gene83724.t1 | AT2G27190 | 71.729 | 428 | 121 | 0 | 4 | 431 | 31 | 458 | 0.0 | 664 |
| MS.gene83724.t1 | AT1G56360 | 64.920 | 439 | 145 | 4 | 4 | 436 | 23 | 458 | 0.0 | 597 |
| MS.gene83724.t1 | AT2G16430 | 81.602 | 337 | 62 | 0 | 101 | 437 | 7 | 343 | 0.0 | 590 |
| MS.gene83724.t1 | AT4G36350 | 63.098 | 439 | 154 | 4 | 3 | 436 | 23 | 458 | 0.0 | 586 |
| MS.gene83724.t1 | AT5G34850 | 60.000 | 430 | 169 | 2 | 4 | 432 | 25 | 452 | 0.0 | 550 |
| MS.gene83724.t1 | AT2G18130 | 57.666 | 437 | 159 | 5 | 4 | 437 | 27 | 440 | 0.0 | 516 |
| MS.gene83724.t1 | AT3G46120 | 49.083 | 436 | 135 | 9 | 3 | 431 | 26 | 381 | 3.13e-135 | 394 |
| MS.gene83724.t1 | AT1G52940 | 60.905 | 243 | 90 | 4 | 19 | 258 | 1 | 241 | 1.79e-104 | 310 |
| MS.gene83724.t1 | AT3G20500 | 43.577 | 397 | 196 | 9 | 31 | 426 | 45 | 414 | 1.00e-99 | 305 |
| MS.gene83724.t1 | AT3G52820 | 41.919 | 396 | 201 | 8 | 33 | 426 | 47 | 415 | 2.94e-97 | 299 |
| MS.gene83724.t1 | AT3G52780 | 41.960 | 398 | 202 | 10 | 33 | 426 | 44 | 416 | 2.34e-91 | 283 |
| MS.gene83724.t1 | AT3G52810 | 41.667 | 396 | 202 | 8 | 33 | 426 | 51 | 419 | 2.02e-90 | 281 |
| MS.gene83724.t1 | AT3G07130 | 35.476 | 420 | 198 | 11 | 67 | 429 | 115 | 518 | 1.53e-72 | 238 |
| MS.gene83724.t1 | AT2G32770 | 35.354 | 396 | 176 | 9 | 85 | 415 | 143 | 523 | 2.82e-66 | 221 |
| MS.gene83724.t1 | AT3G07130 | 32.892 | 453 | 198 | 12 | 67 | 429 | 115 | 551 | 8.44e-66 | 221 |
| MS.gene83724.t1 | AT4G13700 | 33.967 | 421 | 211 | 14 | 7 | 378 | 33 | 435 | 3.98e-63 | 211 |
| MS.gene83724.t1 | AT3G52780 | 39.414 | 307 | 168 | 9 | 33 | 335 | 44 | 336 | 1.71e-58 | 196 |
| MS.gene83724.t1 | AT2G32770 | 33.770 | 382 | 173 | 9 | 85 | 401 | 62 | 428 | 2.29e-58 | 197 |
| MS.gene83724.t1 | AT2G32770 | 32.071 | 396 | 160 | 10 | 85 | 415 | 143 | 494 | 1.73e-52 | 184 |
| MS.gene83724.t1 | AT4G13700 | 33.518 | 361 | 189 | 12 | 16 | 332 | 47 | 400 | 2.05e-51 | 179 |
| MS.gene83724.t1 | AT5G50400 | 26.124 | 356 | 222 | 15 | 91 | 416 | 165 | 509 | 1.00e-21 | 98.2 |
| MS.gene83724.t1 | AT5G50400 | 26.124 | 356 | 222 | 15 | 91 | 416 | 237 | 581 | 1.02e-21 | 98.2 |
| MS.gene83724.t1 | AT1G13750 | 27.671 | 365 | 205 | 15 | 91 | 416 | 239 | 583 | 3.24e-21 | 97.1 |
| MS.gene83724.t1 | AT2G03450 | 25.597 | 461 | 240 | 17 | 31 | 418 | 141 | 571 | 7.33e-21 | 95.9 |
| MS.gene83724.t1 | AT1G13900 | 24.078 | 461 | 267 | 15 | 20 | 418 | 132 | 571 | 2.00e-20 | 94.4 |
| MS.gene83724.t1 | AT4G24890 | 25.275 | 364 | 225 | 15 | 91 | 421 | 241 | 590 | 5.34e-19 | 90.1 |
Find 101 sgRNAs with CRISPR-Local
Find 238 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCAGAAGCTTACGATTTC+TGG | 0.090901 | 4.3:-62629716 | None:intergenic |
| TCCAACCTCATAATAATATT+TGG | 0.245668 | 4.3:-62628695 | None:intergenic |
| TTGCTTATCAACCTTGGATA+TGG | 0.251792 | 4.3:+62629663 | MS.gene83724:CDS |
| GGTCGGATGCAGTGCGTTAC+TGG | 0.268473 | 4.3:+62628469 | MS.gene83724:CDS |
| GTACTTTGTGATGCTTTATA+AGG | 0.272518 | 4.3:-62629918 | None:intergenic |
| ATTGCATATAATATCGTAAA+TGG | 0.292313 | 4.3:+62630766 | MS.gene83724:CDS |
| AGAACACAACAAGGCAGTTT+TGG | 0.305509 | 4.3:+62628722 | MS.gene83724:CDS |
| CTGGAGCAAAATCAAGTTCA+TGG | 0.316555 | 4.3:-62629697 | None:intergenic |
| TTATTCATCACGCCACTATA+AGG | 0.317273 | 4.3:+62628568 | MS.gene83724:CDS |
| GTGATGCTTTATAAGGAGTA+TGG | 0.325433 | 4.3:-62629911 | None:intergenic |
| AAAGTTGATGTTGTGTTTGC+TGG | 0.344435 | 4.3:+62630619 | MS.gene83724:CDS |
| CACAAAGTACCTCACCCTTT+TGG | 0.352815 | 4.3:+62629931 | MS.gene83724:CDS |
| CACCTAACATTGTCATGATT+CGG | 0.364435 | 4.3:-62629608 | None:intergenic |
| ACAATGTTAGGTGGGATACT+TGG | 0.374862 | 4.3:+62629618 | MS.gene83724:CDS |
| TCAATGGGAACCATGAGGTT+TGG | 0.378926 | 4.3:-62631206 | None:intergenic |
| AAGAGCTACCAAGAGTTAAC+AGG | 0.379038 | 4.3:+62630479 | MS.gene83724:CDS |
| TACCTTCAAATTCCTTATAG+TGG | 0.384082 | 4.3:-62628580 | None:intergenic |
| GGACAAACAGTTCTGTTTGT+TGG | 0.384350 | 4.3:+62629560 | MS.gene83724:CDS |
| GTATGGTATCGGTGCGAAAA+AGG | 0.385639 | 4.3:-62629894 | None:intergenic |
| AGATACTTCAATTACTCATC+TGG | 0.391362 | 4.3:+62628543 | MS.gene83724:CDS |
| CCATACACATTTGGTCTCAT+AGG | 0.391563 | 4.3:+62628778 | MS.gene83724:CDS |
| TTTACAACTCCTCCTGCAAT+TGG | 0.394407 | 4.3:+62628745 | MS.gene83724:CDS |
| CTGTTAAGAGTGATTCCCTT+TGG | 0.403017 | 4.3:+62631149 | MS.gene83724:CDS |
| GCATTTAGAGAAGCCAGCTT+TGG | 0.403959 | 4.3:+62631055 | MS.gene83724:CDS |
| CCAAATGTGTATGGCACATC+AGG | 0.405903 | 4.3:-62628769 | None:intergenic |
| CACATTCAGTATTCTTCAAT+GGG | 0.419089 | 4.3:-62631221 | None:intergenic |
| CCTGATGTGCCATACACATT+TGG | 0.422920 | 4.3:+62628769 | MS.gene83724:CDS |
| GGCACATCAGGACCAATTGC+AGG | 0.425315 | 4.3:-62628757 | None:intergenic |
| TGGTTATAATGCTCCTCAAC+AGG | 0.425812 | 4.3:+62627630 | MS.gene83724:CDS |
| GTCAGACTTATGATTCAAAC+AGG | 0.429494 | 4.3:+62629504 | MS.gene83724:CDS |
| TGAGGTTTGGAATCATCAAC+CGG | 0.433017 | 4.3:-62631193 | None:intergenic |
| CAATGTTAGGTGGGATACTT+GGG | 0.445086 | 4.3:+62629619 | MS.gene83724:CDS |
| ACCCGAATCATGACAATGTT+AGG | 0.449055 | 4.3:+62629606 | MS.gene83724:CDS |
| TTGGCCTCATATTCAGCATA+TGG | 0.449605 | 4.3:+62629990 | MS.gene83724:CDS |
| ACCAAATATTATTATGAGGT+TGG | 0.454862 | 4.3:+62628694 | MS.gene83724:CDS |
| GGAGATGGAGGGAATATTGA+AGG | 0.475816 | 4.3:+62630838 | MS.gene83724:CDS |
| TGGAGGGAATATTGAAGGCT+TGG | 0.478696 | 4.3:+62630843 | MS.gene83724:CDS |
| TTCAGCACACATCATTGTCT+TGG | 0.481429 | 4.3:+62629971 | MS.gene83724:CDS |
| AATACCATATGCTGAATATG+AGG | 0.494395 | 4.3:-62629994 | None:intergenic |
| ACCTAACATTGTCATGATTC+GGG | 0.496093 | 4.3:-62629607 | None:intergenic |
| TCTCCAATGTTTATGTATAC+CGG | 0.496808 | 4.3:-62630820 | None:intergenic |
| AGCACAAGAAGCTAGCTAAA+GGG | 0.498611 | 4.3:+62628505 | MS.gene83724:CDS |
| CAATACCAAATATTATTATG+AGG | 0.502409 | 4.3:+62628690 | MS.gene83724:CDS |
| CCTATGAGACCAAATGTGTA+TGG | 0.507863 | 4.3:-62628778 | None:intergenic |
| GGACACATGCTTACTATAGC+TGG | 0.509099 | 4.3:+62631104 | MS.gene83724:CDS |
| TCTCTAAATGCCGAGTACTC+TGG | 0.513274 | 4.3:-62631043 | None:intergenic |
| TATCAATTGAATTCAACAAA+AGG | 0.519489 | 4.3:+62629539 | MS.gene83724:CDS |
| TCTTCAAGCCATGTGTATTG+TGG | 0.521338 | 4.3:-62630457 | None:intergenic |
| AAGCACAAGAAGCTAGCTAA+AGG | 0.523147 | 4.3:+62628504 | MS.gene83724:CDS |
| TGAGAGTAATGTTTGAGTCA+TGG | 0.529431 | 4.3:+62630584 | MS.gene83724:CDS |
| GCTATCAAGTGGCATATCAA+TGG | 0.530810 | 4.3:-62627587 | None:intergenic |
| CGCCACTATAAGGAATTTGA+AGG | 0.534447 | 4.3:+62628578 | MS.gene83724:CDS |
| GGAGTGTTGCTTATCAACCT+TGG | 0.535303 | 4.3:+62629657 | MS.gene83724:CDS |
| CAACCTTGGATATGGACCAT+TGG | 0.535416 | 4.3:+62629671 | MS.gene83724:CDS |
| TGTAAAAGATCTATCAGCTC+CGG | 0.538281 | 4.3:+62630801 | MS.gene83724:CDS |
| TACATAAACATTGGAGATGG+AGG | 0.548402 | 4.3:+62630826 | MS.gene83724:CDS |
| ATCTTTCGTAGGCATGTACA+TGG | 0.549448 | 4.3:-62630642 | None:intergenic |
| ATCAAGTTCATGGTTTCCAA+TGG | 0.557475 | 4.3:-62629687 | None:intergenic |
| ACAGCTATCATTACATGGAA+GGG | 0.559696 | 4.3:+62630554 | MS.gene83724:CDS |
| AACAGCTATCATTACATGGA+AGG | 0.564929 | 4.3:+62630553 | MS.gene83724:CDS |
| TGGGTGACAGAGGATGAACC+AGG | 0.567319 | 4.3:+62628447 | MS.gene83724:CDS |
| CTTTATAAGGAGTATGGTAT+CGG | 0.573117 | 4.3:-62629905 | None:intergenic |
| ACAACCACAACCAGAGTACT+CGG | 0.573517 | 4.3:+62631033 | MS.gene83724:CDS |
| CAGCTATCATTACATGGAAG+GGG | 0.582038 | 4.3:+62630555 | MS.gene83724:CDS |
| TTGTTCTCATGCATTCACCT+TGG | 0.582761 | 4.3:+62630521 | MS.gene83724:CDS |
| GTTGATGATTCCAAACCTCA+TGG | 0.582800 | 4.3:+62631196 | MS.gene83724:CDS |
| TTTCCAATGGTCCATATCCA+AGG | 0.583661 | 4.3:-62629674 | None:intergenic |
| CGAATCATGACAATGTTAGG+TGG | 0.590318 | 4.3:+62629609 | MS.gene83724:CDS |
| GTATACATAAACATTGGAGA+TGG | 0.590351 | 4.3:+62630823 | MS.gene83724:CDS |
| TAGCAACAGCTATCATTACA+TGG | 0.590375 | 4.3:+62630549 | MS.gene83724:CDS |
| AATGCCGAGTACTCTGGTTG+TGG | 0.591969 | 4.3:-62631037 | None:intergenic |
| TAACGCACTGCATCCGACCC+TGG | 0.593203 | 4.3:-62628465 | None:intergenic |
| TTAGGTGGGATACTTGGGGA+AGG | 0.593341 | 4.3:+62629624 | MS.gene83724:CDS |
| GCTCCGGTATACATAAACAT+TGG | 0.596986 | 4.3:+62630817 | MS.gene83724:CDS |
| GAAAGCATTGATCGTATCGT+GGG | 0.598017 | 4.3:+62628428 | MS.gene83724:CDS |
| GATAGAATACCAAAAGGGTG+AGG | 0.602138 | 4.3:-62629940 | None:intergenic |
| GGTACTTACAGATCTTTCGT+AGG | 0.602509 | 4.3:-62630653 | None:intergenic |
| GACAGAGGATGAACCAGGGT+CGG | 0.603361 | 4.3:+62628452 | MS.gene83724:CDS |
| GATCGTATCGTGGGTGACAG+AGG | 0.610705 | 4.3:+62628437 | MS.gene83724:CDS |
| CTTGGGGAAGGTTTGCAGAG+AGG | 0.615319 | 4.3:+62629636 | MS.gene83724:CDS |
| TAACACAAGGGGATCATGTG+GGG | 0.620282 | 4.3:+62628406 | MS.gene83724:CDS |
| TATAACACAAGGGGATCATG+TGG | 0.626607 | 4.3:+62628404 | MS.gene83724:CDS |
| ATAACACAAGGGGATCATGT+GGG | 0.628273 | 4.3:+62628405 | MS.gene83724:CDS |
| ACATAAACATTGGAGATGGA+GGG | 0.632691 | 4.3:+62630827 | MS.gene83724:CDS |
| GAATCATGACAATGTTAGGT+GGG | 0.633810 | 4.3:+62629610 | MS.gene83724:CDS |
| GGAAAGCATTGATCGTATCG+TGG | 0.634091 | 4.3:+62628427 | MS.gene83724:CDS |
| AGCTGGCATAGAAATCAAGA+TGG | 0.638512 | 4.3:+62631121 | MS.gene83724:CDS |
| ATGAAGGTTCATATAACACA+AGG | 0.647690 | 4.3:+62628393 | MS.gene83724:intron |
| GAAGGTTCATATAACACAAG+GGG | 0.659194 | 4.3:+62628395 | MS.gene83724:intron |
| TGTTGAGGAGCATTATAACC+AGG | 0.661090 | 4.3:-62627628 | None:intergenic |
| GAGGTTTGGAATCATCAACC+GGG | 0.673172 | 4.3:-62631192 | None:intergenic |
| AATATACACCACAATACACA+TGG | 0.674739 | 4.3:+62630449 | MS.gene83724:CDS |
| TGAAGGTTCATATAACACAA+GGG | 0.678515 | 4.3:+62628394 | MS.gene83724:intron |
| ATTCTTCAATGGGAACCATG+AGG | 0.678851 | 4.3:-62631211 | None:intergenic |
| TGCATGAGAACAATCAACCA+AGG | 0.682000 | 4.3:-62630511 | None:intergenic |
| ACATCAGGACCAATTGCAGG+AGG | 0.687083 | 4.3:-62628754 | None:intergenic |
| TAGCTGTTGCTATTATACCA+AGG | 0.710700 | 4.3:-62630538 | None:intergenic |
| GGGTGACAGAGGATGAACCA+GGG | 0.727268 | 4.3:+62628448 | MS.gene83724:CDS |
| AATGTTAGGTGGGATACTTG+GGG | 0.732363 | 4.3:+62629620 | MS.gene83724:CDS |
| TTGGACTTAAGAACACAACA+AGG | 0.748770 | 4.3:+62628713 | MS.gene83724:CDS |
| TGAGGAGCATTATAACCAGG+AGG | 0.752719 | 4.3:-62627625 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAATTGTAATAAAAATTTA+GGG | + | chr4.3:62627943-62627962 | MS.gene83724:intron | 10.0% |
| !! | TATAAAACAATACTTAATAT+TGG | + | chr4.3:62630908-62630927 | MS.gene83724:intron | 10.0% |
| !!! | TAAATTTTTATTACAATTCT+CGG | - | chr4.3:62627943-62627962 | None:intergenic | 10.0% |
| !!! | TAATTTTCTCAAATTATTAA+CGG | - | chr4.3:62628945-62628964 | None:intergenic | 10.0% |
| !! | AAATTATTACAAGGATTTAA+AGG | - | chr4.3:62630221-62630240 | None:intergenic | 15.0% |
| !! | AACAGAAATTCAATATAAAA+TGG | - | chr4.3:62627807-62627826 | None:intergenic | 15.0% |
| !! | AATAGTAAATAAGGATAATT+TGG | + | chr4.3:62628327-62628346 | MS.gene83724:intron | 15.0% |
| !! | ATTCTTGATATTATAAAGAA+TGG | + | chr4.3:62627986-62628005 | MS.gene83724:intron | 15.0% |
| !! | GAGAATTGTAATAAAAATTT+AGG | + | chr4.3:62627942-62627961 | MS.gene83724:intron | 15.0% |
| !! | TTCAGTGTAATTATATATAT+CGG | + | chr4.3:62628970-62628989 | MS.gene83724:intron | 15.0% |
| !!! | AAATTATCCTTATTTACTAT+TGG | - | chr4.3:62628328-62628347 | None:intergenic | 15.0% |
| !!! | AATTTTCTCAAATTATTAAC+GGG | - | chr4.3:62628944-62628963 | None:intergenic | 15.0% |
| !!! | ATATAAATATTTCATTTTGC+AGG | + | chr4.3:62629165-62629184 | MS.gene83724:intron | 15.0% |
| !!! | ATTTTATTTTTTACTTCAGT+AGG | - | chr4.3:62630250-62630269 | None:intergenic | 15.0% |
| !!! | CAATTTTTGACATAAAAAAT+AGG | + | chr4.3:62631083-62631102 | MS.gene83724:CDS | 15.0% |
| !!! | CATTTTGAAACAAATTTTTT+TGG | - | chr4.3:62628201-62628220 | None:intergenic | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | - | chr4.3:62628304-62628323 | None:intergenic | 15.0% |
| !!! | TGATATATATCGATTTAATT+TGG | + | chr4.3:62629734-62629753 | MS.gene83724:intron | 15.0% |
| !!! | TGTTTTTTATTATTATCACT+AGG | + | chr4.3:62627493-62627512 | MS.gene83724:intron | 15.0% |
| !!! | TTTTATTTTTTACTTCAGTA+GGG | - | chr4.3:62630249-62630268 | None:intergenic | 15.0% |
| !! | AAAATCTATTGAAAAACCAA+AGG | - | chr4.3:62631168-62631187 | None:intergenic | 20.0% |
| !! | AAACTAACCAATAGTAAATA+AGG | + | chr4.3:62628318-62628337 | MS.gene83724:intron | 20.0% |
| !! | AAATCTATTGAAAAACCAAA+GGG | - | chr4.3:62631167-62631186 | None:intergenic | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | - | chr4.3:62628241-62628260 | None:intergenic | 20.0% |
| !! | ATCGTTTATGATAAGTATAT+TGG | - | chr4.3:62630677-62630696 | None:intergenic | 20.0% |
| !! | ATTGCATATAATATCGTAAA+TGG | + | chr4.3:62630766-62630785 | MS.gene83724:CDS | 20.0% |
| !! | ATTTCTGTAAATGATTAACA+TGG | + | chr4.3:62629832-62629851 | MS.gene83724:intron | 20.0% |
| !! | CAATACCAAATATTATTATG+AGG | + | chr4.3:62628690-62628709 | MS.gene83724:CDS | 20.0% |
| !! | TATCAATTGAATTCAACAAA+AGG | + | chr4.3:62629539-62629558 | MS.gene83724:CDS | 20.0% |
| !! | TGGAAGTAAATATACAAAAT+AGG | + | chr4.3:62628006-62628025 | MS.gene83724:intron | 20.0% |
| !! | TTATTGTGTAAACTTGTAAA+GGG | + | chr4.3:62630347-62630366 | MS.gene83724:intron | 20.0% |
| !! | TTTATTATTATCACTAGGTT+TGG | + | chr4.3:62627498-62627517 | MS.gene83724:intron | 20.0% |
| !! | TTTCTGTTAAAATATACTCT+TGG | + | chr4.3:62627819-62627838 | MS.gene83724:intron | 20.0% |
| !!! | AATAAATCTTCATTTTTCTC+AGG | + | chr4.3:62630424-62630443 | MS.gene83724:intron | 20.0% |
| !!! | GGATATATGTTTTTAAATCA+CGG | + | chr4.3:62627696-62627715 | MS.gene83724:intron | 20.0% |
| !!! | TTTGGTTTTTCAATAGATTT+TGG | + | chr4.3:62631167-62631186 | MS.gene83724:CDS | 20.0% |
| !!! | TTTTAAGATATCCTTCAATT+GGG | + | chr4.3:62629097-62629116 | MS.gene83724:intron | 20.0% |
| !!! | TTTTTAAGATATCCTTCAAT+TGG | + | chr4.3:62629096-62629115 | MS.gene83724:intron | 20.0% |
| ! | AAAAATCCACTATTAGATGT+TGG | - | chr4.3:62630155-62630174 | None:intergenic | 25.0% |
| ! | AAATAGAAAAATACCTGTTG+AGG | - | chr4.3:62627646-62627665 | None:intergenic | 25.0% |
| ! | AAATATCAAAACTTTGCATC+TGG | - | chr4.3:62628650-62628669 | None:intergenic | 25.0% |
| ! | AACTTATGATGATACATGTT+TGG | + | chr4.3:62628075-62628094 | MS.gene83724:intron | 25.0% |
| ! | AATGATTAAGAGAAAGAGAA+TGG | - | chr4.3:62628361-62628380 | None:intergenic | 25.0% |
| ! | ACCAAATATTATTATGAGGT+TGG | + | chr4.3:62628694-62628713 | MS.gene83724:CDS | 25.0% |
| ! | ATGAATATGATTTGAATTGC+AGG | + | chr4.3:62631005-62631024 | MS.gene83724:intron | 25.0% |
| ! | CATTGCATTTCTTAATATGA+AGG | + | chr4.3:62628377-62628396 | MS.gene83724:intron | 25.0% |
| ! | CTTATTGTGTAAACTTGTAA+AGG | + | chr4.3:62630346-62630365 | MS.gene83724:intron | 25.0% |
| ! | GAAAATTGAAGTTAAAATGC+AGG | + | chr4.3:62627744-62627763 | MS.gene83724:intron | 25.0% |
| ! | GAGTCATTAAGTTTCATATA+TGG | - | chr4.3:62630883-62630902 | None:intergenic | 25.0% |
| ! | TCCAACCTCATAATAATATT+TGG | - | chr4.3:62628698-62628717 | None:intergenic | 25.0% |
| !! | CTTTTGATAGAATACCAAAA+GGG | - | chr4.3:62629948-62629967 | None:intergenic | 25.0% |
| !! | TATTTTACAATAACAGTGTG+TGG | - | chr4.3:62630124-62630143 | None:intergenic | 25.0% |
| !! | TCAAATAGAATTGATTCCAT+TGG | - | chr4.3:62630085-62630104 | None:intergenic | 25.0% |
| !! | TCTTTTGATAGAATACCAAA+AGG | - | chr4.3:62629949-62629968 | None:intergenic | 25.0% |
| !! | TTGATATTTGTGCTTCTTTT+TGG | + | chr4.3:62628661-62628680 | MS.gene83724:intron | 25.0% |
| !!! | AACAAGTATTTTTGTTAGGA+AGG | + | chr4.3:62627555-62627574 | MS.gene83724:CDS | 25.0% |
| !!! | ATAATTACTTCTAAAGTCAC+CGG | - | chr4.3:62629276-62629295 | None:intergenic | 25.0% |
| AATACCATATGCTGAATATG+AGG | - | chr4.3:62629997-62630016 | None:intergenic | 30.0% | |
| AATATACACCACAATACACA+TGG | + | chr4.3:62630449-62630468 | MS.gene83724:CDS | 30.0% | |
| AATTTGACCTTGTAACATGA+AGG | - | chr4.3:62630287-62630306 | None:intergenic | 30.0% | |
| ACATACATGCATTTCACATA+TGG | + | chr4.3:62630040-62630059 | MS.gene83724:intron | 30.0% | |
| ACCACAATGATATCTCATAA+AGG | - | chr4.3:62628832-62628851 | None:intergenic | 30.0% | |
| AGAAACAACATACATGAGAA+GGG | - | chr4.3:62628624-62628643 | None:intergenic | 30.0% | |
| AGAAAGAAATGTTTCTCGAA+TGG | - | chr4.3:62629766-62629785 | None:intergenic | 30.0% | |
| AGATACTTCAATTACTCATC+TGG | + | chr4.3:62628543-62628562 | MS.gene83724:CDS | 30.0% | |
| AGGGACGTTAAATTATTACA+AGG | - | chr4.3:62630230-62630249 | None:intergenic | 30.0% | |
| ATGAAGGTTCATATAACACA+AGG | + | chr4.3:62628393-62628412 | MS.gene83724:intron | 30.0% | |
| ATTTGACCTTGTAACATGAA+GGG | - | chr4.3:62630286-62630305 | None:intergenic | 30.0% | |
| CATTTACAGAAATTTCGACT+TGG | - | chr4.3:62629825-62629844 | None:intergenic | 30.0% | |
| CTTTCAGTTCTCTTACAAAT+TGG | + | chr4.3:62629060-62629079 | MS.gene83724:intron | 30.0% | |
| GTACTTTGTGATGCTTTATA+AGG | - | chr4.3:62629921-62629940 | None:intergenic | 30.0% | |
| GTATACATAAACATTGGAGA+TGG | + | chr4.3:62630823-62630842 | MS.gene83724:CDS | 30.0% | |
| TAAATACGTATGAACAACGA+TGG | + | chr4.3:62630949-62630968 | MS.gene83724:intron | 30.0% | |
| TACCTTCAAATTCCTTATAG+TGG | - | chr4.3:62628583-62628602 | None:intergenic | 30.0% | |
| TCCATGGATCAATTCAAAAT+TGG | - | chr4.3:62627671-62627690 | None:intergenic | 30.0% | |
| TCTCCAATGTTTATGTATAC+CGG | - | chr4.3:62630823-62630842 | None:intergenic | 30.0% | |
| TGAAGGTTCATATAACACAA+GGG | + | chr4.3:62628394-62628413 | MS.gene83724:intron | 30.0% | |
| TTAAAAACATCGCTATCAAG+TGG | - | chr4.3:62627601-62627620 | None:intergenic | 30.0% | |
| TTAAAATGCAGGTTTAATCG+TGG | + | chr4.3:62627755-62627774 | MS.gene83724:intron | 30.0% | |
| TTAACAGGAAAAAAACTCCT+TGG | + | chr4.3:62630494-62630513 | MS.gene83724:CDS | 30.0% | |
| TTTACACCAACATCTAATAG+TGG | + | chr4.3:62630146-62630165 | MS.gene83724:intron | 30.0% | |
| TTTCATATATGGAGCTTACT+TGG | - | chr4.3:62630872-62630891 | None:intergenic | 30.0% | |
| ! | CTTTATAAGGAGTATGGTAT+CGG | - | chr4.3:62629908-62629927 | None:intergenic | 30.0% |
| ! | TAAAACTCTGAGTTGAAAGA+TGG | - | chr4.3:62629390-62629409 | None:intergenic | 30.0% |
| ! | TATTTGAAGCAAGAGTTTAG+TGG | + | chr4.3:62630098-62630117 | MS.gene83724:intron | 30.0% |
| ! | TCCAATTTTGAATTGATCCA+TGG | + | chr4.3:62627667-62627686 | MS.gene83724:intron | 30.0% |
| !! | AATTTGGTGTTTGTGTGTAA+TGG | + | chr4.3:62627526-62627545 | MS.gene83724:intron | 30.0% |
| !! | GCACAACAAGTATTTTTGTT+AGG | + | chr4.3:62627551-62627570 | MS.gene83724:CDS | 30.0% |
| !! | TATATATATCGGTGTCGTAT+CGG | + | chr4.3:62628981-62629000 | MS.gene83724:intron | 30.0% |
| !!! | ACTAGGTTTGGTTTTGAATT+TGG | + | chr4.3:62627510-62627529 | MS.gene83724:intron | 30.0% |
| !!! | ACTTGATAGCGATGTTTTTA+AGG | + | chr4.3:62627600-62627619 | MS.gene83724:CDS | 30.0% |
| !!! | GTTTTTTTCCTGTTAACTCT+TGG | - | chr4.3:62630490-62630509 | None:intergenic | 30.0% |
| !!! | TTTCAATAGATTTTGGAACC+CGG | + | chr4.3:62631174-62631193 | MS.gene83724:CDS | 30.0% |
| AAAAATTGCATGTCCAAAGC+TGG | - | chr4.3:62631071-62631090 | None:intergenic | 35.0% | |
| AACAGCTATCATTACATGGA+AGG | + | chr4.3:62630553-62630572 | MS.gene83724:CDS | 35.0% | |
| AACATATATCCCTTCTTCCA+TGG | - | chr4.3:62627687-62627706 | None:intergenic | 35.0% | |
| AACGATGGAGACAGTTAAAA+AGG | + | chr4.3:62630964-62630983 | MS.gene83724:intron | 35.0% | |
| AATTCCACAACAATGCATGT+AGG | - | chr4.3:62628116-62628135 | None:intergenic | 35.0% | |
| ACAAACCATAACCAATCATC+CGG | + | chr4.3:62629254-62629273 | MS.gene83724:intron | 35.0% | |
| ACAGCTATCATTACATGGAA+GGG | + | chr4.3:62630554-62630573 | MS.gene83724:CDS | 35.0% | |
| ACATAAACATTGGAGATGGA+GGG | + | chr4.3:62630827-62630846 | MS.gene83724:CDS | 35.0% | |
| ACCTAACATTGTCATGATTC+GGG | - | chr4.3:62629610-62629629 | None:intergenic | 35.0% | |
| AGGGAGTAAAACTTAAAGCA+AGG | - | chr4.3:62628152-62628171 | None:intergenic | 35.0% | |
| AGGTAAAGTGTGATCTTTCA+TGG | + | chr4.3:62628798-62628817 | MS.gene83724:intron | 35.0% | |
| ATCAAGTTCATGGTTTCCAA+TGG | - | chr4.3:62629690-62629709 | None:intergenic | 35.0% | |
| ATGGATCGATGATTATTTGC+AGG | + | chr4.3:62629851-62629870 | MS.gene83724:intron | 35.0% | |
| CACCTAACATTGTCATGATT+CGG | - | chr4.3:62629611-62629630 | None:intergenic | 35.0% | |
| CTAAGAGATATGTTTGTGTC+AGG | + | chr4.3:62630729-62630748 | MS.gene83724:intron | 35.0% | |
| GAAGGTTCATATAACACAAG+GGG | + | chr4.3:62628395-62628414 | MS.gene83724:intron | 35.0% | |
| GAATCATGACAATGTTAGGT+GGG | + | chr4.3:62629610-62629629 | MS.gene83724:CDS | 35.0% | |
| GAGAAACAACATACATGAGA+AGG | - | chr4.3:62628625-62628644 | None:intergenic | 35.0% | |
| GCCTTTATGAGATATCATTG+TGG | + | chr4.3:62628828-62628847 | MS.gene83724:intron | 35.0% | |
| GTCAGACTTATGATTCAAAC+AGG | + | chr4.3:62629504-62629523 | MS.gene83724:CDS | 35.0% | |
| GTGATGCTTTATAAGGAGTA+TGG | - | chr4.3:62629914-62629933 | None:intergenic | 35.0% | |
| TAACATCCCTTCATGTTACA+AGG | + | chr4.3:62630277-62630296 | MS.gene83724:intron | 35.0% | |
| TAAGATATCCTTCAATTGGG+TGG | + | chr4.3:62629100-62629119 | MS.gene83724:intron | 35.0% | |
| TACATAAACATTGGAGATGG+AGG | + | chr4.3:62630826-62630845 | MS.gene83724:CDS | 35.0% | |
| TAGCAACAGCTATCATTACA+TGG | + | chr4.3:62630549-62630568 | MS.gene83724:CDS | 35.0% | |
| TATCAGAAGCTTACGATTTC+TGG | - | chr4.3:62629719-62629738 | None:intergenic | 35.0% | |
| TCTCATATGCCAACATACAT+AGG | - | chr4.3:62629135-62629154 | None:intergenic | 35.0% | |
| TGAATTGATCCATGGAAGAA+GGG | + | chr4.3:62627675-62627694 | MS.gene83724:intron | 35.0% | |
| TGAGAGTAATGTTTGAGTCA+TGG | + | chr4.3:62630584-62630603 | MS.gene83724:CDS | 35.0% | |
| TGGATCGATGATTATTTGCA+GGG | + | chr4.3:62629852-62629871 | MS.gene83724:intron | 35.0% | |
| TGTAAAAGATCTATCAGCTC+CGG | + | chr4.3:62630801-62630820 | MS.gene83724:CDS | 35.0% | |
| TTATTCATCACGCCACTATA+AGG | + | chr4.3:62628568-62628587 | MS.gene83724:CDS | 35.0% | |
| TTGAATTGATCCATGGAAGA+AGG | + | chr4.3:62627674-62627693 | MS.gene83724:intron | 35.0% | |
| TTGCTTATCAACCTTGGATA+TGG | + | chr4.3:62629663-62629682 | MS.gene83724:CDS | 35.0% | |
| TTGGACTTAAGAACACAACA+AGG | + | chr4.3:62628713-62628732 | MS.gene83724:CDS | 35.0% | |
| ! | GATGATACATGTTTGGTCTT+TGG | + | chr4.3:62628082-62628101 | MS.gene83724:intron | 35.0% |
| ! | GCTGATTCTATGATTTCCAA+TGG | + | chr4.3:62630066-62630085 | MS.gene83724:intron | 35.0% |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | - | chr4.3:62628279-62628298 | None:intergenic | 35.0% |
| ! | TAGCTGTTGCTATTATACCA+AGG | - | chr4.3:62630541-62630560 | None:intergenic | 35.0% |
| ! | TGTGCAGAGTATTAATTGGA+GGG | - | chr4.3:62628275-62628294 | None:intergenic | 35.0% |
| ! | TTTTGTTAGGAAGGTTGAGA+AGG | + | chr4.3:62627564-62627583 | MS.gene83724:CDS | 35.0% |
| !! | AAAGTTGATGTTGTGTTTGC+TGG | + | chr4.3:62630619-62630638 | MS.gene83724:CDS | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | - | chr4.3:62628175-62628194 | None:intergenic | 35.0% |
| AAGAGCTACCAAGAGTTAAC+AGG | + | chr4.3:62630479-62630498 | MS.gene83724:CDS | 40.0% | |
| AAGCACAAGAAGCTAGCTAA+AGG | + | chr4.3:62628504-62628523 | MS.gene83724:CDS | 40.0% | |
| AAGGATGCTACATCAGTTTG+TGG | - | chr4.3:62629470-62629489 | None:intergenic | 40.0% | |
| AATGTTAGGTGGGATACTTG+GGG | + | chr4.3:62629620-62629639 | MS.gene83724:CDS | 40.0% | |
| ACAATGTTAGGTGGGATACT+TGG | + | chr4.3:62629618-62629637 | MS.gene83724:CDS | 40.0% | |
| ACCCGAATCATGACAATGTT+AGG | + | chr4.3:62629606-62629625 | MS.gene83724:CDS | 40.0% | |
| AGAGAGATCATTTGTCCATG+AGG | - | chr4.3:62630328-62630347 | None:intergenic | 40.0% | |
| AGCACAAGAAGCTAGCTAAA+GGG | + | chr4.3:62628505-62628524 | MS.gene83724:CDS | 40.0% | |
| AGCTGGCATAGAAATCAAGA+TGG | + | chr4.3:62631121-62631140 | MS.gene83724:CDS | 40.0% | |
| ATAACACAAGGGGATCATGT+GGG | + | chr4.3:62628405-62628424 | MS.gene83724:CDS | 40.0% | |
| ATATCCTTCAATTGGGTGGA+TGG | + | chr4.3:62629104-62629123 | MS.gene83724:intron | 40.0% | |
| ATCTTTCGTAGGCATGTACA+TGG | - | chr4.3:62630645-62630664 | None:intergenic | 40.0% | |
| ATGAAGCACGGATATGGAAA+AGG | + | chr4.3:62628880-62628899 | MS.gene83724:intron | 40.0% | |
| ATGGAGTCTCCTATGTATGT+TGG | + | chr4.3:62629123-62629142 | MS.gene83724:intron | 40.0% | |
| CAATGTTAGGTGGGATACTT+GGG | + | chr4.3:62629619-62629638 | MS.gene83724:CDS | 40.0% | |
| CAGCTATCATTACATGGAAG+GGG | + | chr4.3:62630555-62630574 | MS.gene83724:CDS | 40.0% | |
| CATACATGAGAAGGGAGTAA+TGG | - | chr4.3:62628616-62628635 | None:intergenic | 40.0% | |
| CATTCCTACATGCATTGTTG+TGG | + | chr4.3:62628109-62628128 | MS.gene83724:intron | 40.0% | |
| CCATACACATTTGGTCTCAT+AGG | + | chr4.3:62628778-62628797 | MS.gene83724:CDS | 40.0% | |
| CCTATGAGACCAAATGTGTA+TGG | - | chr4.3:62628781-62628800 | None:intergenic | 40.0% | |
| CGAATCATGACAATGTTAGG+TGG | + | chr4.3:62629609-62629628 | MS.gene83724:CDS | 40.0% | |
| CGCCACTATAAGGAATTTGA+AGG | + | chr4.3:62628578-62628597 | MS.gene83724:CDS | 40.0% | |
| CTGGAGCAAAATCAAGTTCA+TGG | - | chr4.3:62629700-62629719 | None:intergenic | 40.0% | |
| CTGTTAAGAGTGATTCCCTT+TGG | + | chr4.3:62631149-62631168 | MS.gene83724:CDS | 40.0% | |
| GATAGAATACCAAAAGGGTG+AGG | - | chr4.3:62629943-62629962 | None:intergenic | 40.0% | |
| GCTATCAAGTGGCATATCAA+TGG | - | chr4.3:62627590-62627609 | None:intergenic | 40.0% | |
| GCTCCGGTATACATAAACAT+TGG | + | chr4.3:62630817-62630836 | MS.gene83724:CDS | 40.0% | |
| GGACAAACAGTTCTGTTTGT+TGG | + | chr4.3:62629560-62629579 | MS.gene83724:CDS | 40.0% | |
| GGTACTTACAGATCTTTCGT+AGG | - | chr4.3:62630656-62630675 | None:intergenic | 40.0% | |
| TATAACACAAGGGGATCATG+TGG | + | chr4.3:62628404-62628423 | MS.gene83724:CDS | 40.0% | |
| TCTTCAAGCCATGTGTATTG+TGG | - | chr4.3:62630460-62630479 | None:intergenic | 40.0% | |
| TGATCAGTTCCTATGAAGCA+CGG | + | chr4.3:62628868-62628887 | MS.gene83724:intron | 40.0% | |
| TGCATGAGAACAATCAACCA+AGG | - | chr4.3:62630514-62630533 | None:intergenic | 40.0% | |
| TGGTTATAATGCTCCTCAAC+AGG | + | chr4.3:62627630-62627649 | MS.gene83724:CDS | 40.0% | |
| TTCAGCACACATCATTGTCT+TGG | + | chr4.3:62629971-62629990 | MS.gene83724:CDS | 40.0% | |
| TTGGCCTCATATTCAGCATA+TGG | + | chr4.3:62629990-62630009 | MS.gene83724:CDS | 40.0% | |
| TTGTTCTCATGCATTCACCT+TGG | + | chr4.3:62630521-62630540 | MS.gene83724:CDS | 40.0% | |
| TTTACAACTCCTCCTGCAAT+TGG | + | chr4.3:62628745-62628764 | MS.gene83724:CDS | 40.0% | |
| TTTCCAATGGTCCATATCCA+AGG | - | chr4.3:62629677-62629696 | None:intergenic | 40.0% | |
| TTTCCATATCCGTGCTTCAT+AGG | - | chr4.3:62628880-62628899 | None:intergenic | 40.0% | |
| ! | ACTGATGTAGCATCCTTTTC+AGG | + | chr4.3:62629473-62629492 | MS.gene83724:intron | 40.0% |
| ! | AGAACACAACAAGGCAGTTT+TGG | + | chr4.3:62628722-62628741 | MS.gene83724:CDS | 40.0% |
| ! | GGAGCTGATAGATCTTTTAC+AGG | - | chr4.3:62630802-62630821 | None:intergenic | 40.0% |
| ! | GTGTGCAGAGTATTAATTGG+AGG | - | chr4.3:62628276-62628295 | None:intergenic | 40.0% |
| ! | TGAGGTTTGGAATCATCAAC+CGG | - | chr4.3:62631196-62631215 | None:intergenic | 40.0% |
| ! | TTGGTGTTTGTGTGTAATGG+AGG | + | chr4.3:62627529-62627548 | MS.gene83724:intron | 40.0% |
| !! | GAAAGCATTGATCGTATCGT+GGG | + | chr4.3:62628428-62628447 | MS.gene83724:CDS | 40.0% |
| !! | GTTGATGATTCCAAACCTCA+TGG | + | chr4.3:62631196-62631215 | MS.gene83724:CDS | 40.0% |
| !! | TGTTGAGGAGCATTATAACC+AGG | - | chr4.3:62627631-62627650 | None:intergenic | 40.0% |
| !! | TTCTAAAGTCACCGGATGAT+TGG | - | chr4.3:62629268-62629287 | None:intergenic | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr4.3:62628171-62628190 | None:intergenic | 40.0% |
| !!! | GATGTTTTTAAGGTTCCTCC+TGG | + | chr4.3:62627610-62627629 | MS.gene83724:CDS | 40.0% |
| ATTAGACGTGTCCTAGTGTC+GGG | - | chr4.3:62629025-62629044 | None:intergenic | 45.0% | |
| ATTGTTGAGCTGACACCTCA+TGG | + | chr4.3:62630310-62630329 | MS.gene83724:intron | 45.0% | |
| CAACCTTGGATATGGACCAT+TGG | + | chr4.3:62629671-62629690 | MS.gene83724:CDS | 45.0% | |
| CATAGACACAGTCAGCGTAA+AGG | - | chr4.3:62629359-62629378 | None:intergenic | 45.0% | |
| CCAAATGTGTATGGCACATC+AGG | - | chr4.3:62628772-62628791 | None:intergenic | 45.0% | |
| CCTGATGTGCCATACACATT+TGG | + | chr4.3:62628769-62628788 | MS.gene83724:CDS | 45.0% | |
| CTGACCAAGATCACCTGAAA+AGG | - | chr4.3:62629489-62629508 | None:intergenic | 45.0% | |
| CTGCGATGAAAATACACTCG+TGG | + | chr4.3:62627882-62627901 | MS.gene83724:intron | 45.0% | |
| GATTAGACGTGTCCTAGTGT+CGG | - | chr4.3:62629026-62629045 | None:intergenic | 45.0% | |
| GCATTTAGAGAAGCCAGCTT+TGG | + | chr4.3:62631055-62631074 | MS.gene83724:CDS | 45.0% | |
| GGACACATGCTTACTATAGC+TGG | + | chr4.3:62631104-62631123 | MS.gene83724:CDS | 45.0% | |
| GGAGATGGAGGGAATATTGA+AGG | + | chr4.3:62630838-62630857 | MS.gene83724:CDS | 45.0% | |
| GTTCCTATGAAGCACGGATA+TGG | + | chr4.3:62628874-62628893 | MS.gene83724:intron | 45.0% | |
| TAACACAAGGGGATCATGTG+GGG | + | chr4.3:62628406-62628425 | MS.gene83724:CDS | 45.0% | |
| TCAATGGGAACCATGAGGTT+TGG | - | chr4.3:62631209-62631228 | None:intergenic | 45.0% | |
| TCTCTAAATGCCGAGTACTC+TGG | - | chr4.3:62631046-62631065 | None:intergenic | 45.0% | |
| TGGAGGGAATATTGAAGGCT+TGG | + | chr4.3:62630843-62630862 | MS.gene83724:CDS | 45.0% | |
| ! | ACAACCACAACCAGAGTACT+CGG | + | chr4.3:62631033-62631052 | MS.gene83724:CDS | 45.0% |
| ! | AGTCACCGGATGATTGGTTA+TGG | - | chr4.3:62629262-62629281 | None:intergenic | 45.0% |
| ! | GAGGTTTGGAATCATCAACC+GGG | - | chr4.3:62631195-62631214 | None:intergenic | 45.0% |
| !! | CACAAAGTACCTCACCCTTT+TGG | + | chr4.3:62629931-62629950 | MS.gene83724:CDS | 45.0% |
| !! | GGAAAGCATTGATCGTATCG+TGG | + | chr4.3:62628427-62628446 | MS.gene83724:CDS | 45.0% |
| !! | GGAGTGTTGCTTATCAACCT+TGG | + | chr4.3:62629657-62629676 | MS.gene83724:CDS | 45.0% |
| !! | GTATGGTATCGGTGCGAAAA+AGG | - | chr4.3:62629897-62629916 | None:intergenic | 45.0% |
| !! | TGAGGAGCATTATAACCAGG+AGG | - | chr4.3:62627628-62627647 | None:intergenic | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr4.3:62628172-62628191 | None:intergenic | 45.0% |
| !!! | GCATCCTTTTCAGGTGATCT+TGG | + | chr4.3:62629482-62629501 | MS.gene83724:intron | 45.0% |
| !! | AAATGAAATATTTATATTAT+TGG | - | chr4.3:62629162-62629181 | None:intergenic | 5.0% |
| !!! | TTTTTTTTCATAAATTATTT+CGG | + | chr4.3:62630696-62630715 | MS.gene83724:intron | 5.0% |
| AATGCCGAGTACTCTGGTTG+TGG | - | chr4.3:62631040-62631059 | None:intergenic | 50.0% | |
| ACATCAGGACCAATTGCAGG+AGG | - | chr4.3:62628757-62628776 | None:intergenic | 50.0% | |
| ACTAGGACACGTCTAATCCG+AGG | + | chr4.3:62629028-62629047 | MS.gene83724:intron | 50.0% | |
| CGGTGCGAAAAAGGCTTGAA+TGG | - | chr4.3:62629888-62629907 | None:intergenic | 50.0% | |
| GACTCCATCCACCCAATTGA+AGG | - | chr4.3:62629111-62629130 | None:intergenic | 50.0% | |
| TTAGGTGGGATACTTGGGGA+AGG | + | chr4.3:62629624-62629643 | MS.gene83724:CDS | 50.0% | |
| ! | ACTGAAAGCACGACACTCCT+CGG | - | chr4.3:62629048-62629067 | None:intergenic | 50.0% |
| !! | TATCGGTGTCGTATCGGTGT+CGG | + | chr4.3:62628987-62629006 | MS.gene83724:intron | 50.0% |
| CTTGGGGAAGGTTTGCAGAG+AGG | + | chr4.3:62629636-62629655 | MS.gene83724:CDS | 55.0% | |
| GACAGAGGATGAACCAGGGT+CGG | + | chr4.3:62628452-62628471 | MS.gene83724:CDS | 55.0% | |
| GATCGTATCGTGGGTGACAG+AGG | + | chr4.3:62628437-62628456 | MS.gene83724:CDS | 55.0% | |
| GGCACATCAGGACCAATTGC+AGG | - | chr4.3:62628760-62628779 | None:intergenic | 55.0% | |
| GGGTGACAGAGGATGAACCA+GGG | + | chr4.3:62628448-62628467 | MS.gene83724:CDS | 55.0% | |
| TGGGTGACAGAGGATGAACC+AGG | + | chr4.3:62628447-62628466 | MS.gene83724:CDS | 55.0% | |
| !! | ATCGGTGTCGTATCGGTGTC+GGG | + | chr4.3:62628988-62629007 | MS.gene83724:intron | 55.0% |
| AGTGTCCGTGTCGTCGTGTC+TGG | - | chr4.3:62628909-62628928 | None:intergenic | 60.0% | |
| CGACACGGACACTGACATGC+TGG | + | chr4.3:62628916-62628935 | MS.gene83724:intron | 60.0% | |
| GGACACCAGACACGACGACA+CGG | + | chr4.3:62628901-62628920 | MS.gene83724:intron | 60.0% | |
| GGTCGGATGCAGTGCGTTAC+TGG | + | chr4.3:62628469-62628488 | MS.gene83724:CDS | 60.0% | |
| TAACGCACTGCATCCGACCC+TGG | - | chr4.3:62628468-62628487 | None:intergenic | 60.0% | |
| CACGTGTCGTGCCCGACACT+AGG | + | chr4.3:62629011-62629030 | MS.gene83724:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 62627463 | 62631228 | 62627463 | ID=MS.gene83724 |
| chr4.3 | mRNA | 62627463 | 62631228 | 62627463 | ID=MS.gene83724.t1;Parent=MS.gene83724 |
| chr4.3 | exon | 62627463 | 62627466 | 62627463 | ID=MS.gene83724.t1.exon1;Parent=MS.gene83724.t1 |
| chr4.3 | CDS | 62627463 | 62627466 | 62627463 | ID=cds.MS.gene83724.t1;Parent=MS.gene83724.t1 |
| chr4.3 | exon | 62627551 | 62627651 | 62627551 | ID=MS.gene83724.t1.exon2;Parent=MS.gene83724.t1 |
| chr4.3 | CDS | 62627551 | 62627651 | 62627551 | ID=cds.MS.gene83724.t1;Parent=MS.gene83724.t1 |
| chr4.3 | exon | 62628399 | 62628599 | 62628399 | ID=MS.gene83724.t1.exon3;Parent=MS.gene83724.t1 |
| chr4.3 | CDS | 62628399 | 62628599 | 62628399 | ID=cds.MS.gene83724.t1;Parent=MS.gene83724.t1 |
| chr4.3 | exon | 62628688 | 62628799 | 62628688 | ID=MS.gene83724.t1.exon4;Parent=MS.gene83724.t1 |
| chr4.3 | CDS | 62628688 | 62628799 | 62628688 | ID=cds.MS.gene83724.t1;Parent=MS.gene83724.t1 |
| chr4.3 | exon | 62629495 | 62629724 | 62629495 | ID=MS.gene83724.t1.exon5;Parent=MS.gene83724.t1 |
| chr4.3 | CDS | 62629495 | 62629724 | 62629495 | ID=cds.MS.gene83724.t1;Parent=MS.gene83724.t1 |
| chr4.3 | exon | 62629873 | 62630011 | 62629873 | ID=MS.gene83724.t1.exon6;Parent=MS.gene83724.t1 |
| chr4.3 | CDS | 62629873 | 62630011 | 62629873 | ID=cds.MS.gene83724.t1;Parent=MS.gene83724.t1 |
| chr4.3 | exon | 62630446 | 62630666 | 62630446 | ID=MS.gene83724.t1.exon7;Parent=MS.gene83724.t1 |
| chr4.3 | CDS | 62630446 | 62630666 | 62630446 | ID=cds.MS.gene83724.t1;Parent=MS.gene83724.t1 |
| chr4.3 | exon | 62630751 | 62630872 | 62630751 | ID=MS.gene83724.t1.exon8;Parent=MS.gene83724.t1 |
| chr4.3 | CDS | 62630751 | 62630872 | 62630751 | ID=cds.MS.gene83724.t1;Parent=MS.gene83724.t1 |
| chr4.3 | exon | 62631027 | 62631228 | 62631027 | ID=MS.gene83724.t1.exon9;Parent=MS.gene83724.t1 |
| chr4.3 | CDS | 62631027 | 62631228 | 62631027 | ID=cds.MS.gene83724.t1;Parent=MS.gene83724.t1 |
| Gene Sequence |
| Protein sequence |
