AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene84039

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene84039.t1 MTR_1g050740 98.848 781 8 1 1 780 1 781 0.0 1601
MS.gene84039.t1 MTR_7g089950 70.690 812 186 12 1 780 1 792 0.0 1126
MS.gene84039.t1 MTR_3g014650 61.857 797 225 17 8 780 33 774 0.0 942
MS.gene84039.t1 MTR_8g039100 60.914 788 253 13 6 780 6 751 0.0 932
MS.gene84039.t1 MTR_3g073100 49.663 741 296 12 55 779 52 731 0.0 661
MS.gene84039.t1 MTR_3g073100 36.842 114 68 1 47 160 137 246 2.21e-14 77.4
MS.gene84039.t1 MTR_1g062740 43.567 785 363 17 56 776 47 815 0.0 604
MS.gene84039.t1 MTR_5g459450 49.120 682 296 15 130 779 70 732 0.0 575
MS.gene84039.t1 MTR_5g459450 62.424 165 62 0 55 219 64 228 8.54e-66 234
MS.gene84039.t1 MTR_8g088930 39.719 783 376 16 56 774 9 759 0.0 546
MS.gene84039.t1 MTR_8g088930 38.655 119 73 0 54 172 76 194 7.53e-18 89.0
MS.gene84039.t1 MTR_8g088930 39.668 784 376 16 56 774 9 760 0.0 545
MS.gene84039.t1 MTR_8g088930 38.655 119 73 0 54 172 76 194 7.48e-18 89.0
MS.gene84039.t1 MTR_3g097260 46.796 671 314 13 130 779 56 704 1.03e-180 534
MS.gene84039.t1 MTR_3g097260 59.218 179 73 0 55 233 50 228 1.80e-60 217
MS.gene84039.t1 MTR_8g095170 45.333 675 319 13 123 779 24 666 2.26e-176 522
MS.gene84039.t1 MTR_8g095170 51.415 212 101 2 58 268 28 238 2.73e-63 224
MS.gene84039.t1 MTR_8g095170 40.000 85 50 1 55 139 118 201 5.38e-11 66.6
MS.gene84039.t1 MTR_8g088930 41.653 617 304 12 56 647 9 594 6.60e-157 472
MS.gene84039.t1 MTR_8g088930 38.655 119 73 0 54 172 76 194 7.31e-18 88.6
MS.gene84039.t1 MTR_8g088930 41.653 617 304 12 56 647 9 594 7.28e-157 472
MS.gene84039.t1 MTR_8g088930 38.655 119 73 0 54 172 76 194 7.11e-18 88.6
MS.gene84039.t1 MTR_8g095170 45.640 539 255 11 123 643 24 542 3.61e-139 423
MS.gene84039.t1 MTR_8g095170 51.415 212 101 2 58 268 28 238 5.20e-63 222
MS.gene84039.t1 MTR_8g095170 40.000 85 50 1 55 139 118 201 7.13e-11 66.2
MS.gene84039.t1 MTR_8g080860 39.674 184 111 0 56 239 16 199 1.03e-34 134
MS.gene84039.t1 MTR_8g080860 35.758 165 104 1 54 216 104 268 4.97e-24 103
MS.gene84039.t1 MTR_8g080860 35.507 138 89 0 59 196 134 271 3.29e-17 83.2
MS.gene84039.t1 MTR_8g080860 39.674 184 111 0 56 239 12 195 1.47e-34 134
MS.gene84039.t1 MTR_8g080860 35.758 165 104 1 54 216 100 264 6.46e-24 102
MS.gene84039.t1 MTR_8g080860 35.507 138 89 0 59 196 130 267 4.21e-17 82.8
MS.gene84039.t1 MTR_4g107460 34.434 212 137 1 35 244 29 240 2.11e-32 129
MS.gene84039.t1 MTR_4g107460 37.778 180 111 1 62 240 11 190 5.12e-30 122
MS.gene84039.t1 MTR_4g107460 34.722 144 94 0 62 205 104 247 3.31e-20 93.2
MS.gene84039.t1 MTR_4g107460 39.000 100 60 1 148 246 5 104 3.88e-11 65.9
MS.gene84039.t1 MTR_8g092090 32.692 208 130 2 50 247 20 227 2.48e-29 117
MS.gene84039.t1 MTR_8g092090 30.726 179 113 1 38 205 53 231 2.63e-20 91.7
MS.gene84039.t1 MTR_8g092090 27.222 180 100 2 98 246 1 180 6.83e-15 75.5
MS.gene84039.t1 MTR_6g043150 38.021 192 118 1 57 247 7 198 4.19e-28 116
MS.gene84039.t1 MTR_6g043150 36.239 218 114 2 54 246 71 288 1.71e-27 114
MS.gene84039.t1 MTR_6g043150 36.813 182 115 0 54 235 142 323 2.99e-23 102
MS.gene84039.t1 MTR_6g043150 30.645 248 157 4 21 257 75 318 1.61e-21 97.1
MS.gene84039.t1 MTR_6g043150 43.103 116 66 0 54 169 211 326 7.85e-19 89.0
MS.gene84039.t1 MTR_7g451440 33.161 193 125 1 57 245 189 381 6.85e-27 115
MS.gene84039.t1 MTR_7g451440 33.163 196 124 2 81 273 190 381 5.18e-21 97.4
MS.gene84039.t1 MTR_8g007500 33.161 193 125 1 57 245 194 386 7.19e-27 115
MS.gene84039.t1 MTR_5g010840 34.071 226 111 2 59 246 111 336 5.68e-26 111
MS.gene84039.t1 MTR_5g010840 33.511 188 117 1 54 241 175 354 1.31e-24 107
MS.gene84039.t1 MTR_5g010840 38.793 116 71 0 45 160 250 365 7.08e-17 84.0
MS.gene84039.t1 MTR_5g010840 30.323 155 108 0 55 209 214 368 2.69e-13 72.8
MS.gene84039.t1 MTR_4g099180 33.846 195 124 1 47 236 154 348 7.68e-26 111
MS.gene84039.t1 MTR_4g099180 32.961 179 117 1 81 256 170 348 2.16e-19 92.0
MS.gene84039.t1 MTR_8g080350 32.314 229 116 3 59 249 125 352 1.39e-25 110
MS.gene84039.t1 MTR_8g080350 31.544 149 87 2 54 187 189 337 1.43e-13 73.9
MS.gene84039.t1 MTR_8g080350 24.082 245 137 6 87 284 86 328 1.28e-11 67.8
MS.gene84039.t1 MTR_3g005910 64.865 74 24 1 502 575 1 72 1.31e-24 98.2
MS.gene84039.t1 MTR_2g078470 32.018 228 109 2 60 241 79 306 1.39e-24 107
MS.gene84039.t1 MTR_2g078470 30.901 233 160 1 54 285 142 374 5.17e-23 102
MS.gene84039.t1 MTR_2g078470 34.579 214 117 1 56 246 6 219 1.21e-21 98.2
MS.gene84039.t1 MTR_2g078470 33.152 184 123 0 58 241 54 237 2.30e-21 97.4
MS.gene84039.t1 MTR_2g078470 31.500 200 135 1 49 246 158 357 3.26e-20 94.0
MS.gene84039.t1 MTR_2g078470 33.133 166 111 0 82 247 9 174 3.03e-14 75.9
MS.gene84039.t1 MTR_8g080340 38.298 141 86 1 56 196 16 155 6.77e-24 99.8
MS.gene84039.t1 MTR_8g080340 39.695 131 77 2 87 216 23 152 1.45e-20 90.1
MS.gene84039.t1 MTR_8g080340 35.507 138 89 0 107 244 20 157 3.62e-17 80.1
MS.gene84039.t1 MTR_8g080340 30.128 156 102 3 133 288 23 171 9.36e-16 76.3
MS.gene84039.t1 MTR_5g058920 30.131 229 153 2 6 230 142 367 2.19e-23 104
MS.gene84039.t1 MTR_5g058920 38.281 128 79 0 62 189 245 372 6.85e-19 90.5
MS.gene84039.t1 MTR_5g058920 32.558 172 116 0 81 252 195 366 4.56e-18 88.2
MS.gene84039.t1 MTR_8g095240 34.673 199 97 2 65 230 9 207 3.24e-23 103
MS.gene84039.t1 MTR_8g095240 29.437 231 125 4 59 251 118 348 3.60e-17 85.1
MS.gene84039.t1 MTR_3g072650 29.060 234 159 3 1 230 125 355 6.28e-23 102
MS.gene84039.t1 MTR_3g072650 31.126 151 104 0 96 246 175 325 1.45e-14 77.0
MS.gene84039.t1 MTR_3g072650 29.060 234 159 3 1 230 125 355 1.06e-22 102
MS.gene84039.t1 MTR_3g072650 31.126 151 104 0 96 246 175 325 1.80e-14 77.0
MS.gene84039.t1 MTR_8g080310 33.557 149 99 0 82 230 9 157 2.71e-19 85.9
MS.gene84039.t1 MTR_8g080310 33.566 143 95 0 65 207 15 157 9.07e-17 78.6
MS.gene84039.t1 MTR_8g080310 33.099 142 95 0 99 240 3 144 2.23e-16 77.4
MS.gene84039.t1 MTR_4g099180 34.286 140 87 1 47 181 154 293 6.44e-17 82.8
MS.gene84039.t1 MTR_4g099180 33.333 129 77 1 67 195 165 284 1.90e-13 72.4
MS.gene84039.t1 MTR_4g099180 31.452 124 85 0 104 227 170 293 5.39e-13 71.2
MS.gene84039.t1 MTR_4g099180 35.000 140 86 1 47 181 154 293 9.48e-17 82.8
MS.gene84039.t1 MTR_4g099180 34.783 115 75 0 81 195 170 284 4.72e-13 71.6
MS.gene84039.t1 MTR_4g099180 30.645 124 86 0 104 227 170 293 2.66e-12 69.3
MS.gene84039.t1 MTR_3g023310 35.433 127 69 2 73 199 9 122 1.48e-13 70.1
MS.gene84039.t1 MTR_8g092410 32.331 133 86 3 96 224 145 277 4.51e-13 72.0
MS.gene84039.t1 MTR_8g092410 37.190 121 71 3 60 176 156 275 1.47e-11 67.4
MS.gene84039.t1 MTR_8g092410 29.747 158 92 4 98 248 133 278 4.42e-11 65.9
MS.gene84039.t1 MTR_1g112280 26.977 215 112 5 17 211 552 741 5.06e-13 73.2
MS.gene84039.t1 MTR_1g097110 33.831 201 105 11 456 639 1314 1503 1.60e-11 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene84039.t1 AT3G56960 68.125 800 214 10 1 780 1 779 0.0 1124
MS.gene84039.t1 AT3G56960 68.125 800 214 10 1 780 1 779 0.0 1124
MS.gene84039.t1 AT2G41210 68.262 794 215 9 2 780 1 772 0.0 1122
MS.gene84039.t1 AT3G07960 66.532 744 189 12 51 780 18 715 0.0 1006
MS.gene84039.t1 AT3G07960 64.561 649 170 12 51 685 18 620 0.0 839
MS.gene84039.t1 AT3G07960 65.434 622 160 10 51 658 18 598 0.0 823
MS.gene84039.t1 AT3G07960 65.434 622 160 10 51 658 18 598 0.0 823
MS.gene84039.t1 AT1G77740 53.887 746 259 14 55 779 72 753 0.0 734
MS.gene84039.t1 AT1G77740 40.000 90 54 0 49 138 158 247 9.88e-16 82.0
MS.gene84039.t1 AT1G77740 53.887 746 259 14 55 779 72 753 0.0 734
MS.gene84039.t1 AT1G77740 40.000 90 54 0 49 138 158 247 9.88e-16 82.0
MS.gene84039.t1 AT1G21980 53.012 747 263 14 55 779 71 751 0.0 731
MS.gene84039.t1 AT1G21980 40.000 85 51 0 54 138 162 246 2.66e-14 77.4
MS.gene84039.t1 AT3G09920 41.268 836 412 18 1 780 1 813 0.0 592
MS.gene84039.t1 AT3G09920 41.268 836 412 18 1 780 1 813 0.0 592
MS.gene84039.t1 AT3G09920 41.268 836 412 18 1 780 1 813 0.0 592
MS.gene84039.t1 AT3G09920 41.268 836 412 18 1 780 1 813 0.0 592
MS.gene84039.t1 AT1G60890 40.308 779 397 13 55 780 18 781 0.0 570
MS.gene84039.t1 AT1G60890 40.230 783 400 13 51 780 2 769 0.0 570
MS.gene84039.t1 AT1G10900 39.457 773 395 13 55 779 6 753 0.0 545
MS.gene84039.t1 AT1G10900 35.664 143 92 0 98 240 3 145 2.02e-18 90.5
MS.gene84039.t1 AT1G10900 39.457 773 395 13 55 779 6 753 0.0 545
MS.gene84039.t1 AT1G10900 35.664 143 92 0 98 240 3 145 2.02e-18 90.5
MS.gene84039.t1 AT1G10900 39.457 773 395 13 55 779 6 753 0.0 545
MS.gene84039.t1 AT1G10900 35.664 143 92 0 98 240 3 145 2.02e-18 90.5
MS.gene84039.t1 AT2G26420 45.495 677 316 13 130 779 54 704 1.23e-175 521
MS.gene84039.t1 AT2G26420 54.054 185 85 0 51 235 44 228 2.01e-63 226
MS.gene84039.t1 AT2G26420 45.723 678 327 14 130 779 54 718 3.31e-175 521
MS.gene84039.t1 AT2G26420 54.054 185 85 0 51 235 44 228 1.61e-63 226
MS.gene84039.t1 AT2G26420 45.723 678 327 14 130 779 54 718 3.31e-175 521
MS.gene84039.t1 AT2G26420 54.054 185 85 0 51 235 44 228 1.61e-63 226
MS.gene84039.t1 AT4G01190 35.878 393 193 7 429 776 12 390 4.44e-69 233
MS.gene84039.t1 AT4G01190 36.041 394 191 8 429 776 22 400 7.33e-69 233
MS.gene84039.t1 AT4G01190 36.041 394 191 8 429 776 22 400 7.33e-69 233
MS.gene84039.t1 AT1G01460 41.629 221 124 3 422 642 13 228 1.56e-50 183
MS.gene84039.t1 AT1G01460 42.574 101 44 2 687 779 328 422 3.41e-16 82.4
MS.gene84039.t1 AT1G77660 32.086 187 127 0 44 230 162 348 1.43e-25 110
MS.gene84039.t1 AT1G77660 38.281 128 79 0 62 189 226 353 2.14e-19 92.0
MS.gene84039.t1 AT1G77660 32.727 165 111 0 77 241 172 336 7.07e-19 90.5
MS.gene84039.t1 AT2G35170 33.333 186 124 0 63 248 229 414 5.16e-25 110
MS.gene84039.t1 AT2G35170 33.193 238 143 7 58 294 210 432 3.26e-21 98.2
MS.gene84039.t1 AT1G21920 34.706 170 111 0 61 230 175 344 1.32e-24 107
MS.gene84039.t1 AT1G21920 35.294 136 88 0 54 189 214 349 5.27e-18 87.8
MS.gene84039.t1 AT1G21920 32.105 190 125 1 77 266 168 353 7.29e-18 87.4
MS.gene84039.t1 AT1G21920 34.706 170 111 0 61 230 175 344 1.34e-24 107
MS.gene84039.t1 AT1G21920 35.294 136 88 0 54 189 214 349 4.08e-18 87.4
MS.gene84039.t1 AT1G21920 32.105 190 125 1 77 266 168 353 5.94e-18 87.0
MS.gene84039.t1 AT4G17080 32.941 170 114 0 61 230 258 427 2.99e-24 107
MS.gene84039.t1 AT4G17080 29.018 224 147 2 67 287 250 464 1.79e-21 99.4
MS.gene84039.t1 AT4G17080 34.014 147 97 0 65 211 285 431 2.39e-20 95.9
MS.gene84039.t1 AT1G75010 32.061 131 80 3 88 211 602 730 4.54e-13 73.6

Find 230 sgRNAs with CRISPR-Local

Find 282 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCTGCCTCTTTGATTTCTT+TGG 0.110171 1.3:+32483676 None:intergenic
AATGGAGGAATGGGAGTATT+TGG 0.173763 1.3:-32484245 MS.gene84039:CDS
CAAAGTTTGTCTTGGATTAT+TGG 0.179468 1.3:+32483705 None:intergenic
TTACATTGTGTCAAGTTAAA+TGG 0.204066 1.3:-32482910 MS.gene84039:CDS
AAGCGTGCAAATAGCATATT+TGG 0.241003 1.3:-32484720 MS.gene84039:CDS
TACTAATGGGGATACTTATA+AGG 0.245430 1.3:-32484409 MS.gene84039:CDS
TCAATTTACAATTAGGAATA+AGG 0.246714 1.3:-32483612 MS.gene84039:intron
CGACAGGGACTGCGAGCTTC+TGG 0.264890 1.3:-32482398 MS.gene84039:CDS
CAAGTGATAGAATGCATTTA+TGG 0.272504 1.3:-32483840 MS.gene84039:CDS
ATGGAGGAATGGGAGTATTT+GGG 0.273175 1.3:-32484244 MS.gene84039:CDS
GTTCATTTGTTTGGAGTAAT+GGG 0.280218 1.3:-32484215 MS.gene84039:CDS
CGGATGTGGAGGCGTATATT+TGG 0.281881 1.3:+32483400 None:intergenic
GGAAGGTTCACTTGGCCTTC+AGG 0.290540 1.3:-32484492 MS.gene84039:CDS
AAAGATGAAAACTATTATAT+TGG 0.292496 1.3:-32484270 MS.gene84039:CDS
AAAATTCCCTCAGAACTCTT+AGG 0.292562 1.3:-32483256 MS.gene84039:intron
AGAATGGAGAAGGGGTTTGC+AGG 0.293211 1.3:-32484316 MS.gene84039:CDS
AAATGGACCTTCTCAGAAAA+AGG 0.301997 1.3:-32482893 MS.gene84039:intron
CAGGTACGATTTATCATAAT+GGG 0.302975 1.3:-32482736 MS.gene84039:CDS
TCAGGTACGATTTATCATAA+TGG 0.305456 1.3:-32482737 MS.gene84039:intron
GGGAAGATGGTTTGCCTAAA+GGG 0.309677 1.3:-32484173 MS.gene84039:CDS
GAAGGAGATCTTATTCCTTC+AGG 0.311223 1.3:-32482313 MS.gene84039:CDS
CTCATGCTCAATTTACAATT+AGG 0.312912 1.3:-32483619 MS.gene84039:CDS
AAGATGAAAACTATTATATT+GGG 0.317037 1.3:-32484269 MS.gene84039:CDS
TTGAAAGTTCCATTCCCTTT+AGG 0.322935 1.3:+32484159 None:intergenic
GGAGTTCAAGAGTGGTTATA+TGG 0.324022 1.3:-32484454 MS.gene84039:CDS
TATGTTCCACTTTGATCTCT+TGG 0.324052 1.3:+32484093 None:intergenic
CCTAATGGAGATTACTATAA+AGG 0.342048 1.3:-32484615 MS.gene84039:CDS
GGGGTAAAGGTTCATTTGTT+TGG 0.347168 1.3:-32484224 MS.gene84039:CDS
AACTTCTGCTAGATCCTTCC+AGG 0.357718 1.3:-32482125 MS.gene84039:intron
TTGTTTGGAGTAATGGGAAT+AGG 0.360376 1.3:-32484209 MS.gene84039:CDS
TGCAAGAGGGTCATCTTGAT+TGG 0.360489 1.3:-32484044 MS.gene84039:CDS
TCTGGAACAAGAGGGAATTA+TGG 0.365136 1.3:-32482380 MS.gene84039:CDS
ATTCTTGTGTCCTTTGCATA+TGG 0.366334 1.3:+32483648 None:intergenic
AGGCGTATATTTGGATCCTT+CGG 0.367813 1.3:+32483409 None:intergenic
AGATGGGCAAGTATCAAATT+AGG 0.373698 1.3:-32482021 MS.gene84039:CDS
GTGCATACACTGCTACTAAT+GGG 0.376993 1.3:-32484422 MS.gene84039:CDS
GGTTCATTTGTTTGGAGTAA+TGG 0.378193 1.3:-32484216 MS.gene84039:CDS
CCTTTATAGTAATCTCCATT+AGG 0.378650 1.3:+32484615 None:intergenic
GGTGCATACACTGCTACTAA+TGG 0.379224 1.3:-32484423 MS.gene84039:CDS
GCATCCACTGACATTCTTCT+CGG 0.385623 1.3:+32483892 None:intergenic
GATTTGAAGGGTTCTTCACT+TGG 0.386077 1.3:-32482673 MS.gene84039:CDS
GGAATAGGTATGATGGGTAT+TGG 0.386784 1.3:-32484194 MS.gene84039:CDS
GAATAGGTATGATGGGTATT+GGG 0.389660 1.3:-32484193 MS.gene84039:CDS
CAGGGCATCATTTCCACATA+TGG 0.394680 1.3:+32483196 None:intergenic
GAGATAAGTATGAGGGAGAA+TGG 0.398925 1.3:-32484332 MS.gene84039:CDS
GGCGTATATTTGGATCCTTC+GGG 0.400723 1.3:+32483410 None:intergenic
GGTGCTTTCAAAGTTTGTCT+TGG 0.403471 1.3:+32483697 None:intergenic
GTCATATTGAATGGACTTGT+AGG 0.409501 1.3:+32481840 None:intergenic
CATGTCTTCTCGTGAAATAC+GGG 0.411112 1.3:+32482152 None:intergenic
CCATGTCTTCTCGTGAAATA+CGG 0.420600 1.3:+32482151 None:intergenic
TATGATGGGTATTGGGAAGA+TGG 0.420991 1.3:-32484186 MS.gene84039:CDS
GTTTCAGTAATCTCTGACTC+AGG 0.427126 1.3:+32482634 None:intergenic
CTGCGCGAACTTTCTTCGCC+AGG 0.428848 1.3:-32483176 MS.gene84039:CDS
TATTTCGACTACAACGATCT+TGG 0.431632 1.3:-32482579 MS.gene84039:CDS
ATCCGTCCAGTGAGTTCAAA+TGG 0.435350 1.3:-32483382 MS.gene84039:CDS
GAATGCATTTATGGGGCGGC+GGG 0.442405 1.3:-32483831 MS.gene84039:CDS
TTATGTAGGTAATTGGAGTA+AGG 0.442669 1.3:-32484118 MS.gene84039:CDS
TTCAAATTTAGGTGATTCAG+AGG 0.443051 1.3:-32482187 MS.gene84039:intron
GCAGAGAGGGTTCTACCTAA+TGG 0.444056 1.3:-32484630 MS.gene84039:CDS
CTCTTGCAATTGCGATGACC+CGG 0.444749 1.3:+32484059 None:intergenic
ACGGGAAAGGGAAGTACTTA+TGG 0.445335 1.3:-32484569 MS.gene84039:CDS
AAGTGATAGAATGCATTTAT+GGG 0.445755 1.3:-32483839 MS.gene84039:CDS
ACCAAAGAAATCAAAGAGGC+AGG 0.446584 1.3:-32483677 MS.gene84039:CDS
GAGATTACTATAAAGGAGAA+TGG 0.447048 1.3:-32484608 MS.gene84039:CDS
ACATAGACGCTTTGATTTGA+AGG 0.448858 1.3:-32482686 MS.gene84039:CDS
ACCTCATAGTACTCTCCAAT+TGG 0.449728 1.3:+32481928 None:intergenic
CAAATCAAAGCGTCTATGTA+TGG 0.450308 1.3:+32482690 None:intergenic
CATTTATGGGGCGGCGGGGA+AGG 0.451650 1.3:-32483826 MS.gene84039:CDS
AGTAATGGGAATAGGTATGA+TGG 0.451717 1.3:-32484201 MS.gene84039:CDS
AAGGGAATGGAACTTTCAAA+TGG 0.453903 1.3:-32484155 MS.gene84039:CDS
GAAGGTTCACTTGGCCTTCA+GGG 0.454967 1.3:-32484491 MS.gene84039:CDS
ATATTGGGGAATGGAGGAAT+GGG 0.458059 1.3:-32484254 MS.gene84039:CDS
TATATTGGGGAATGGAGGAA+TGG 0.460284 1.3:-32484255 MS.gene84039:CDS
AGGGAATGGAACTTTCAAAT+GGG 0.460804 1.3:-32484154 MS.gene84039:CDS
AGTGGTTATATGGATGGAAT+AGG 0.464894 1.3:-32484444 MS.gene84039:CDS
CATAAATGCATTCTATCACT+TGG 0.466407 1.3:+32483841 None:intergenic
AGAAGAATGTCAGTGGATGC+AGG 0.469195 1.3:-32483889 MS.gene84039:CDS
CGAGGTTGGGTCATATTGAA+TGG 0.469231 1.3:+32481831 None:intergenic
GAAGGAATAAGATCTCCTTC+TGG 0.470635 1.3:+32482316 None:intergenic
GGATCTCATACTCCACTTGA+TGG 0.471875 1.3:-32482292 MS.gene84039:intron
AACTCATGATCATCTTTAGT+TGG 0.472630 1.3:+32483751 None:intergenic
TCATTGTCTTAATCATATAA+CGG 0.474615 1.3:+32483117 None:intergenic
AATCATATAACGGTCATCAT+TGG 0.476059 1.3:+32483127 None:intergenic
TGGGAAGATGGTTTGCCTAA+AGG 0.476184 1.3:-32484174 MS.gene84039:CDS
GCAAGAGGGTCATCTTGATT+GGG 0.476944 1.3:-32484043 MS.gene84039:CDS
CCTTCAGGGCCAGCTTATGA+AGG 0.476989 1.3:-32484477 MS.gene84039:CDS
CCGTATTTCACGAGAAGACA+TGG 0.478125 1.3:-32482151 MS.gene84039:CDS
AACTCTTAGGAAGCTATTCA+AGG 0.480921 1.3:-32483243 MS.gene84039:CDS
AAAGATGATCATGAGTTGCT+TGG 0.483527 1.3:-32483745 MS.gene84039:CDS
ATAACTTCCCGCACGGGAAA+GGG 0.484725 1.3:-32484581 MS.gene84039:CDS
GTCCTTCCATTTGAACTCAC+TGG 0.484867 1.3:+32483376 None:intergenic
GTATGAGGGAGAATGGAGAA+GGG 0.485541 1.3:-32484325 MS.gene84039:CDS
CGAAAATGATTGTAATAAGC+GGG 0.486540 1.3:+32482970 None:intergenic
ACTGTCCTTTCAACCCGTGC+TGG 0.490246 1.3:+32481988 None:intergenic
AGTACTTCCCTTTCCCGTGC+GGG 0.493055 1.3:+32484574 None:intergenic
GATAACTTCCCGCACGGGAA+AGG 0.493289 1.3:-32484582 MS.gene84039:CDS
ATGATCTCAGGCAAATCGAC+AGG 0.493715 1.3:-32482414 MS.gene84039:intron
AAACGCCTTGAGTATTGCCT+TGG 0.495418 1.3:+32481793 None:intergenic
GATGGTAATAGAACTCCAAC+TGG 0.495992 1.3:-32483802 MS.gene84039:CDS
ACTAATGGGGATACTTATAA+GGG 0.499615 1.3:-32484408 MS.gene84039:CDS
AGTATGAGGGAGAATGGAGA+AGG 0.501294 1.3:-32484326 MS.gene84039:CDS
CCTTCATAAGCTGGCCCTGA+AGG 0.503732 1.3:+32484477 None:intergenic
TCAACGGCTGAAATCGAGGT+TGG 0.505835 1.3:+32481817 None:intergenic
TTCGAATGGAGATAAGTATG+AGG 0.509090 1.3:-32484340 MS.gene84039:CDS
AGTGAGTATCAAGTTAGTCC+TGG 0.511916 1.3:-32483994 MS.gene84039:CDS
ACTGGTAATAGAACTCCAAC+TGG 0.513152 1.3:-32483784 MS.gene84039:CDS
GGAACATATTATCCTTCTCC+CGG 0.513156 1.3:-32484078 MS.gene84039:CDS
AATGGGAGTATTTGGGGTAA+AGG 0.513194 1.3:-32484237 MS.gene84039:CDS
GATGTATATATGTCGGAGAA+TGG 0.513464 1.3:-32484539 MS.gene84039:CDS
TCGAAAATGATTGTAATAAG+CGG 0.514277 1.3:+32482969 None:intergenic
TGAGTATTGCCTTGGATCAA+CGG 0.514920 1.3:+32481801 None:intergenic
TTGAACTCCCCTTCATAAGC+TGG 0.515591 1.3:+32484468 None:intergenic
TCAAGTTAGTCCTGGGGAGA+AGG 0.516462 1.3:-32483986 MS.gene84039:CDS
TAGTAGTATGATGAAGGCAT+GGG 0.520768 1.3:-32484778 MS.gene84039:CDS
CAAAGATAGTAGTATGATGA+AGG 0.524765 1.3:-32484784 MS.gene84039:CDS
AGATTACTATAAAGGAGAAT+GGG 0.528597 1.3:-32484607 MS.gene84039:CDS
CATAGACGCTTTGATTTGAA+GGG 0.529755 1.3:-32482685 MS.gene84039:CDS
AAAACTATTATATTGGGGAA+TGG 0.529848 1.3:-32484263 MS.gene84039:CDS
TTCAAGAGTGGTTATATGGA+TGG 0.530449 1.3:-32484450 MS.gene84039:CDS
CAACGGCTGAAATCGAGGTT+GGG 0.531000 1.3:+32481818 None:intergenic
TCTAAAGATGCTGAAGGGGC+AGG 0.531472 1.3:+32483485 None:intergenic
GATGCAGGGAGGGCAAGTGT+AGG 0.531839 1.3:-32483874 MS.gene84039:CDS
CGATTTCAGCCGTTGATCCA+AGG 0.531996 1.3:-32481810 MS.gene84039:CDS
ATAGTAGTATGATGAAGGCA+TGG 0.535192 1.3:-32484779 MS.gene84039:CDS
TGGGGCGGCGGGGAAGGTGA+TGG 0.539051 1.3:-32483820 MS.gene84039:CDS
AGGGGTTTGCAGGATGGACA+AGG 0.539233 1.3:-32484306 MS.gene84039:CDS
GATTACATGTTATCCATATG+TGG 0.540637 1.3:-32483209 MS.gene84039:CDS
ATGTAAAATAACAAAATGAT+GGG 0.540916 1.3:-32484807 None:intergenic
GTGAGTATCAAGTTAGTCCT+GGG 0.541149 1.3:-32483993 MS.gene84039:CDS
ATGGACTATAGTCTACTAGT+TGG 0.542989 1.3:-32482361 MS.gene84039:CDS
GCATATAATAGGCATTCTGT+TGG 0.543355 1.3:-32483512 MS.gene84039:intron
TCTTTGGAATCAAAAGCTGA+AGG 0.544617 1.3:+32483455 None:intergenic
TTGAACTCACTGGACGGATG+TGG 0.545333 1.3:+32483386 None:intergenic
TATGAGGGAGAATGGAGAAG+GGG 0.546679 1.3:-32484324 MS.gene84039:CDS
GGATACTTATAAGGGACAAT+GGG 0.546935 1.3:-32484400 MS.gene84039:CDS
GTAATGGGAATAGGTATGAT+GGG 0.547115 1.3:-32484200 MS.gene84039:CDS
TGGAGAAGGGGTTTGCAGGA+TGG 0.547536 1.3:-32484312 MS.gene84039:CDS
GATGAAGGCATGGGAGGCCA+CGG 0.548146 1.3:-32484769 MS.gene84039:CDS
ACTATTATATTGGGGAATGG+AGG 0.550145 1.3:-32484260 MS.gene84039:CDS
CAACTCGTAGGAGAACCAAT+TGG 0.552371 1.3:-32481943 MS.gene84039:CDS
TGGGAAAGGGAAGGTTCACT+TGG 0.554254 1.3:-32484500 MS.gene84039:CDS
ATGCAGGGAGGGCAAGTGTA+GGG 0.554397 1.3:-32483873 MS.gene84039:CDS
GGAACTTTCAAATGGGGTGA+TGG 0.556817 1.3:-32484147 MS.gene84039:CDS
ATTTGAAGGGTTCTTCACTT+GGG 0.558907 1.3:-32482672 MS.gene84039:CDS
GTTGGAGTTCTACTACCAGT+TGG 0.560041 1.3:+32483769 None:intergenic
ATATGCCAGCACGGGTTGAA+AGG 0.562062 1.3:-32481993 MS.gene84039:CDS
CTGCGAGCTTCTGGAACAAG+AGG 0.563308 1.3:-32482389 MS.gene84039:CDS
AATTGCGATGACCCGGGAGA+AGG 0.563695 1.3:+32484066 None:intergenic
CCAAAGAAATCAAAGAGGCA+GGG 0.564458 1.3:-32483676 MS.gene84039:CDS
TGGAGGAATGGGAGTATTTG+GGG 0.565397 1.3:-32484243 MS.gene84039:CDS
AATGTCAGTGGATGCAGGGA+GGG 0.565624 1.3:-32483884 MS.gene84039:CDS
AACTCAGTATACACTTGTTG+TGG 0.565787 1.3:+32484018 None:intergenic
GATGGTTTGCCTAAAGGGAA+TGG 0.567377 1.3:-32484168 MS.gene84039:CDS
AGATGAAAACTATTATATTG+GGG 0.568993 1.3:-32484268 MS.gene84039:CDS
TATGTCGGAGAATGGTTCAA+AGG 0.568996 1.3:-32484531 MS.gene84039:CDS
GGGAAGTACTTATGGACAGA+TGG 0.569579 1.3:-32484561 MS.gene84039:CDS
AGAATGCATTTATGGGGCGG+CGG 0.572872 1.3:-32483832 MS.gene84039:CDS
CTTCAGGGCCAGCTTATGAA+GGG 0.574351 1.3:-32484476 MS.gene84039:CDS
AAAACTGAAACCTTCTCCCC+AGG 0.574665 1.3:+32483976 None:intergenic
TCGAATGGAGATAAGTATGA+GGG 0.575640 1.3:-32484339 MS.gene84039:CDS
CAGATCTAAAGATGCTGAAG+GGG 0.578645 1.3:+32483481 None:intergenic
CTGGCGAAGAAAGTTCGCGC+AGG 0.581257 1.3:+32483177 None:intergenic
AGATCATGAAGAAGAAAGCA+AGG 0.581465 1.3:-32484670 MS.gene84039:CDS
TTCCATTTGAACTCACTGGA+CGG 0.581661 1.3:+32483380 None:intergenic
CGAAAGACGTGTGACCTGGA+AGG 0.583241 1.3:+32482111 None:intergenic
ACTGCAAGTCTCTTCTGTGA+TGG 0.584436 1.3:+32483952 None:intergenic
GAAGAATGTCAGTGGATGCA+GGG 0.586181 1.3:-32483888 MS.gene84039:CDS
AGGAGTGAATATGCCAGCAC+GGG 0.590690 1.3:-32482001 MS.gene84039:CDS
GTTGGAGTTCTATTACCAGT+TGG 0.592917 1.3:+32483787 None:intergenic
GGGATACTTATAAGGGACAA+TGG 0.593729 1.3:-32484401 MS.gene84039:CDS
TTAGGTGATTCAGAGGGTGA+AGG 0.596229 1.3:-32482180 MS.gene84039:intron
TGCAGTGTGGAGGTCTACCA+AGG 0.596941 1.3:-32483935 MS.gene84039:CDS
GTCCAGTGAGTTCAAATGGA+AGG 0.597571 1.3:-32483378 MS.gene84039:CDS
AACTCACTGGACGGATGTGG+AGG 0.600098 1.3:+32483389 None:intergenic
TCAGATCTAAAGATGCTGAA+GGG 0.600262 1.3:+32483480 None:intergenic
ACCAATTGGAGAGTACTATG+AGG 0.601964 1.3:-32481929 MS.gene84039:CDS
TTGATCCAAGGCAATACTCA+AGG 0.602133 1.3:-32481798 MS.gene84039:CDS
AAGAAGTATACCATGCAGAG+AGG 0.602501 1.3:-32484644 MS.gene84039:CDS
GCAGTGTGGAGGTCTACCAA+GGG 0.603480 1.3:-32483934 MS.gene84039:CDS
TGGATCAACGGCTGAAATCG+AGG 0.606222 1.3:+32481813 None:intergenic
ATGAATTTGAAACATGGTCA+TGG 0.607160 1.3:-32484375 MS.gene84039:CDS
CGGGTCATCGCAATTGCAAG+AGG 0.607724 1.3:-32484058 MS.gene84039:CDS
TTCAGATCTAAAGATGCTGA+AGG 0.608250 1.3:+32483479 None:intergenic
TAGGAGTGAATATGCCAGCA+CGG 0.611357 1.3:-32482002 MS.gene84039:CDS
TTCAAAGATATATCACCAGA+AGG 0.612199 1.3:-32482331 MS.gene84039:CDS
AATGCATTTATGGGGCGGCG+GGG 0.616007 1.3:-32483830 MS.gene84039:CDS
GAACATATTATCCTTCTCCC+GGG 0.616837 1.3:-32484077 MS.gene84039:CDS
TCTTGCAATTGCGATGACCC+GGG 0.617180 1.3:+32484060 None:intergenic
ACATATGTAGCTTCACAACA+TGG 0.618739 1.3:-32484693 MS.gene84039:CDS
TGGCGAAGAAAGTTCGCGCA+GGG 0.619391 1.3:+32483178 None:intergenic
ACAGATGGATGTATATATGT+CGG 0.620518 1.3:-32484546 MS.gene84039:CDS
TAGGTAGAACCCTCTCTGCA+TGG 0.622199 1.3:+32484634 None:intergenic
TAGTATGATGAAGGCATGGG+AGG 0.625060 1.3:-32484775 MS.gene84039:CDS
TGGACTAGATTTCCTCCCGA+AGG 0.625505 1.3:-32483425 MS.gene84039:CDS
GGGAATGGAACTTTCAAATG+GGG 0.627882 1.3:-32484153 MS.gene84039:CDS
AGAAGTATACCATGCAGAGA+GGG 0.629096 1.3:-32484643 MS.gene84039:CDS
AGAAGAGACTTGCAGTGTGG+AGG 0.631008 1.3:-32483945 MS.gene84039:CDS
GGGTTGATAACTTCCCGCAC+GGG 0.633125 1.3:-32484587 MS.gene84039:CDS
TGGGTTGATAACTTCCCGCA+CGG 0.634421 1.3:-32484588 MS.gene84039:CDS
GGTGAGACGAGTTATTCGAA+TGG 0.634490 1.3:-32484354 MS.gene84039:CDS
TGATCTCAGGCAAATCGACA+GGG 0.634606 1.3:-32482413 MS.gene84039:intron
ATGGACAAGGGAGATATGAG+TGG 0.639995 1.3:-32484293 MS.gene84039:CDS
GGGGTTTGCAGGATGGACAA+GGG 0.643828 1.3:-32484305 MS.gene84039:CDS
TATGAAGGGGAGTTCAAGAG+TGG 0.648354 1.3:-32484462 MS.gene84039:CDS
TTCAGGGCCAGCTTATGAAG+GGG 0.648838 1.3:-32484475 MS.gene84039:CDS
GTATATTTGGATCCTTCGGG+AGG 0.651164 1.3:+32483413 None:intergenic
GATAGAATGCATTTATGGGG+CGG 0.654237 1.3:-32483835 MS.gene84039:CDS
TCAAATTTAGGTGATTCAGA+GGG 0.654588 1.3:-32482186 MS.gene84039:intron
TGCATACACTGCTACTAATG+GGG 0.655254 1.3:-32484421 MS.gene84039:CDS
CAGGGAGAGACCATATGCAA+AGG 0.660979 1.3:-32483658 MS.gene84039:CDS
AGTGATAGAATGCATTTATG+GGG 0.661374 1.3:-32483838 MS.gene84039:CDS
AAGTACTTCCCTTTCCCGTG+CGG 0.662542 1.3:+32484573 None:intergenic
GATTGTGAATTGCAACTCGT+AGG 0.664829 1.3:-32481955 MS.gene84039:CDS
TAAGACAATGAAGAAAGCTG+AGG 0.665400 1.3:-32483105 MS.gene84039:CDS
CACAGAAGAGACTTGCAGTG+TGG 0.670218 1.3:-32483948 MS.gene84039:CDS
GGGTCATCGCAATTGCAAGA+GGG 0.673348 1.3:-32484057 MS.gene84039:CDS
TGCGAGCTTCTGGAACAAGA+GGG 0.678958 1.3:-32482388 MS.gene84039:CDS
AGTGGAGTATGAGATCCTGA+AGG 0.680944 1.3:+32482298 None:intergenic
TGGGTAATGAATTTGAAACA+TGG 0.687560 1.3:-32484381 MS.gene84039:CDS
AAGGATCCAAGAGATCAAAG+TGG 0.687806 1.3:-32484099 MS.gene84039:CDS
GAATGTCAGTGGATGCAGGG+AGG 0.688706 1.3:-32483885 MS.gene84039:CDS
TCTTAGGAAGCTATTCAAGG+TGG 0.689065 1.3:-32483240 MS.gene84039:CDS
GGCCACGGTGAAGAAGACAC+AGG 0.692992 1.3:-32484754 MS.gene84039:CDS
AAGCACCAAAGAAATCAAAG+AGG 0.693395 1.3:-32483681 MS.gene84039:CDS
CAGTGTGGAGGTCTACCAAG+GGG 0.694503 1.3:-32483933 MS.gene84039:CDS
ATGTCTTCTCGTGAAATACG+GGG 0.697359 1.3:+32482153 None:intergenic
TGAGTATCAAGTTAGTCCTG+GGG 0.698062 1.3:-32483992 MS.gene84039:CDS
TAAGCCGAGAAGAATGTCAG+TGG 0.727725 1.3:-32483896 MS.gene84039:CDS
AGTGTGGAGGTCTACCAAGG+GGG 0.727979 1.3:-32483932 MS.gene84039:CDS
TGCCTGTGTCTTCTTCACCG+TGG 0.733834 1.3:+32484752 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGATGAAAACTATTATAT+TGG - chr1.3:32482275-32482294 MS.gene84039:intron 15.0%
!! AAGATGAAAACTATTATATT+GGG - chr1.3:32482276-32482295 MS.gene84039:intron 15.0%
!! AGATAAGATATATACTATTA+TGG + chr1.3:32484291-32484310 None:intergenic 15.0%
!! ATCAATTATAATATGCAAAA+GGG + chr1.3:32483249-32483268 None:intergenic 15.0%
!! TTATAAAATTTATGGATTTC+AGG - chr1.3:32483790-32483809 MS.gene84039:CDS 15.0%
!!! TTATTAGCATAATATTGATT+TGG - chr1.3:32483512-32483531 MS.gene84039:intron 15.0%
!! AGATGAAAACTATTATATTG+GGG - chr1.3:32482277-32482296 MS.gene84039:intron 20.0%
!! ATTGTATATTTGTTTGTAGA+TGG - chr1.3:32484507-32484526 MS.gene84039:CDS 20.0%
!! GATCAATTATAATATGCAAA+AGG + chr1.3:32483250-32483269 None:intergenic 20.0%
!! TCAATTTACAATTAGGAATA+AGG - chr1.3:32482933-32482952 MS.gene84039:CDS 20.0%
!! TCATTGTCTTAATCATATAA+CGG + chr1.3:32483431-32483450 None:intergenic 20.0%
!! TTACTAGTATCTATTCTTAT+AGG - chr1.3:32483725-32483744 MS.gene84039:CDS 20.0%
!! TTGTATATTTGTTTGTAGAT+GGG - chr1.3:32484508-32484527 MS.gene84039:CDS 20.0%
!!! AAATTCCTAGAAAAACATTT+TGG - chr1.3:32484332-32484351 MS.gene84039:CDS 20.0%
!!! AATTTAGATCAAGATCTTTT+AGG + chr1.3:32483943-32483962 None:intergenic 20.0%
! AAAAATCGTCTACAACATTT+AGG + chr1.3:32483682-32483701 None:intergenic 25.0%
! AAAACTATTATATTGGGGAA+TGG - chr1.3:32482282-32482301 MS.gene84039:intron 25.0%
! AAGTGATAGAATGCATTTAT+GGG - chr1.3:32482706-32482725 MS.gene84039:CDS 25.0%
! AGATTACTATAAAGGAGAAT+GGG - chr1.3:32481938-32481957 MS.gene84039:CDS 25.0%
! ATAAGAAAAATACCATCAAG+TGG + chr1.3:32484268-32484287 None:intergenic 25.0%
! ATTAACTACCTAAAAACTAC+TGG + chr1.3:32483201-32483220 None:intergenic 25.0%
! TATATAACAAACACATGACA+TGG + chr1.3:32484112-32484131 None:intergenic 25.0%
! TCGAAAATGATTGTAATAAG+CGG + chr1.3:32483579-32483598 None:intergenic 25.0%
! TTAACTACCTAAAAACTACT+GGG + chr1.3:32483200-32483219 None:intergenic 25.0%
! TTACATTGTGTCAAGTTAAA+TGG - chr1.3:32483635-32483654 MS.gene84039:CDS 25.0%
! TTGATTCCAAAGAAAAAGTA+TGG - chr1.3:32483100-32483119 MS.gene84039:CDS 25.0%
!! AACATCCAAAATGTTTTTCT+AGG + chr1.3:32484340-32484359 None:intergenic 25.0%
!! CATTTTGGATGTTCAAATTT+AGG - chr1.3:32484347-32484366 MS.gene84039:CDS 25.0%
!! GAAGTTTTTATGTAGGTAAT+TGG - chr1.3:32482420-32482439 MS.gene84039:intron 25.0%
!!! GTTTTTCTAGGAATTTAATG+AGG + chr1.3:32484328-32484347 None:intergenic 25.0%
!!! TGTTTGTTATATATGATCTC+AGG - chr1.3:32484119-32484138 MS.gene84039:CDS 25.0%
!!! TTTGAGTTGTTGCATATAAT+AGG - chr1.3:32483022-32483041 MS.gene84039:intron 25.0%
AAAGGAAAAACTATGGGAAA+GGG - chr1.3:32482032-32482051 MS.gene84039:intron 30.0%
AACTCATGATCATCTTTAGT+TGG + chr1.3:32482797-32482816 None:intergenic 30.0%
AATCATATAACGGTCATCAT+TGG + chr1.3:32483421-32483440 None:intergenic 30.0%
ACAGATGGATGTATATATGT+CGG - chr1.3:32481999-32482018 MS.gene84039:CDS 30.0%
ACTAATGGGGATACTTATAA+GGG - chr1.3:32482137-32482156 MS.gene84039:CDS 30.0%
AGTGATAGAATGCATTTATG+GGG - chr1.3:32482707-32482726 MS.gene84039:CDS 30.0%
ATGATATATGATAGCTAGCT+AGG + chr1.3:32484049-32484068 None:intergenic 30.0%
ATGGTTCAAAGGAAAAACTA+TGG - chr1.3:32482025-32482044 MS.gene84039:intron 30.0%
CAAAGATAGTAGTATGATGA+AGG - chr1.3:32481761-32481780 MS.gene84039:CDS 30.0%
CAAAGTTTGTCTTGGATTAT+TGG + chr1.3:32482843-32482862 None:intergenic 30.0%
CAAGTGATAGAATGCATTTA+TGG - chr1.3:32482705-32482724 MS.gene84039:CDS 30.0%
CAGGTACGATTTATCATAAT+GGG - chr1.3:32483809-32483828 MS.gene84039:CDS 30.0%
CATAAATGCATTCTATCACT+TGG + chr1.3:32482707-32482726 None:intergenic 30.0%
CCTAATGGAGATTACTATAA+AGG - chr1.3:32481930-32481949 MS.gene84039:CDS 30.0%
CCTTTATAGTAATCTCCATT+AGG + chr1.3:32481933-32481952 None:intergenic 30.0%
CGAAAATGATTGTAATAAGC+GGG + chr1.3:32483578-32483597 None:intergenic 30.0%
CTCATGCTCAATTTACAATT+AGG - chr1.3:32482926-32482945 MS.gene84039:CDS 30.0%
GAGATTACTATAAAGGAGAA+TGG - chr1.3:32481937-32481956 MS.gene84039:CDS 30.0%
GATTACATGTTATCCATATG+TGG - chr1.3:32483336-32483355 MS.gene84039:intron 30.0%
TAATTCTCTTATCGAAACCA+AGG - chr1.3:32483481-32483500 MS.gene84039:CDS 30.0%
TACTAATGGGGATACTTATA+AGG - chr1.3:32482136-32482155 MS.gene84039:CDS 30.0%
TCAAATTTAGGTGATTCAGA+GGG - chr1.3:32484359-32484378 MS.gene84039:CDS 30.0%
TCAGGTACGATTTATCATAA+TGG - chr1.3:32483808-32483827 MS.gene84039:CDS 30.0%
TGGTATACTCAGAACAAAAA+AGG + chr1.3:32483838-32483857 None:intergenic 30.0%
TGGTTCAAAGGAAAAACTAT+GGG - chr1.3:32482026-32482045 MS.gene84039:intron 30.0%
TTATGTAGGTAATTGGAGTA+AGG - chr1.3:32482427-32482446 MS.gene84039:intron 30.0%
TTCAAAGATATATCACCAGA+AGG - chr1.3:32484214-32484233 MS.gene84039:CDS 30.0%
TTCAAATTTAGGTGATTCAG+AGG - chr1.3:32484358-32484377 MS.gene84039:CDS 30.0%
! ATGAATTTGAAACATGGTCA+TGG - chr1.3:32482170-32482189 MS.gene84039:CDS 30.0%
! GTTCATTTGTTTGGAGTAAT+GGG - chr1.3:32482330-32482349 MS.gene84039:CDS 30.0%
! TGGGTAATGAATTTGAAACA+TGG - chr1.3:32482164-32482183 MS.gene84039:CDS 30.0%
!! ATTGCTTATTCTTTTCGAGA+AGG + chr1.3:32484085-32484104 None:intergenic 30.0%
!! TAGATCAAGATCTTTTAGGA+TGG + chr1.3:32483939-32483958 None:intergenic 30.0%
!!! ACATGCTGATTTTATTTTGC+AGG - chr1.3:32483535-32483554 MS.gene84039:intron 30.0%
!!! CTTGGTTTTTAGAATTTTGC+AGG - chr1.3:32483984-32484003 MS.gene84039:CDS 30.0%
!!! TATGAGGTTGTCTTGTTTTT+CGG - chr1.3:32484632-32484651 MS.gene84039:CDS 30.0%
!!! TCTAGTCCATACTTTTTCTT+TGG + chr1.3:32483109-32483128 None:intergenic 30.0%
AAAATTCCCTCAGAACTCTT+AGG - chr1.3:32483289-32483308 MS.gene84039:intron 35.0%
AAAGATGATCATGAGTTGCT+TGG - chr1.3:32482800-32482819 MS.gene84039:intron 35.0%
AAATGGACCTTCTCAGAAAA+AGG - chr1.3:32483652-32483671 MS.gene84039:CDS 35.0%
AACTCTTAGGAAGCTATTCA+AGG - chr1.3:32483302-32483321 MS.gene84039:intron 35.0%
AAGCACCAAAGAAATCAAAG+AGG - chr1.3:32482864-32482883 MS.gene84039:intron 35.0%
AAGCGTGCAAATAGCATATT+TGG - chr1.3:32481825-32481844 MS.gene84039:CDS 35.0%
AAGGGAATGGAACTTTCAAA+TGG - chr1.3:32482390-32482409 MS.gene84039:CDS 35.0%
ACATATGTAGCTTCACAACA+TGG - chr1.3:32481852-32481871 MS.gene84039:CDS 35.0%
ACTATTATATTGGGGAATGG+AGG - chr1.3:32482285-32482304 MS.gene84039:intron 35.0%
AGATCATGAAGAAGAAAGCA+AGG - chr1.3:32481875-32481894 MS.gene84039:CDS 35.0%
AGATGGGCAAGTATCAAATT+AGG - chr1.3:32484524-32484543 MS.gene84039:CDS 35.0%
AGGGAATGGAACTTTCAAAT+GGG - chr1.3:32482391-32482410 MS.gene84039:CDS 35.0%
AGTGGTTATATGGATGGAAT+AGG - chr1.3:32482101-32482120 MS.gene84039:intron 35.0%
ATAGTAGTATGATGAAGGCA+TGG - chr1.3:32481766-32481785 MS.gene84039:CDS 35.0%
ATTCTTGTGTCCTTTGCATA+TGG + chr1.3:32482900-32482919 None:intergenic 35.0%
ATTTGAAGGGTTCTTCACTT+GGG - chr1.3:32483873-32483892 MS.gene84039:CDS 35.0%
CAAAGGAAAAACTATGGGAA+AGG - chr1.3:32482031-32482050 MS.gene84039:intron 35.0%
GATGTATATATGTCGGAGAA+TGG - chr1.3:32482006-32482025 MS.gene84039:CDS 35.0%
GCATATAATAGGCATTCTGT+TGG - chr1.3:32483033-32483052 MS.gene84039:intron 35.0%
GGATACTTATAAGGGACAAT+GGG - chr1.3:32482145-32482164 MS.gene84039:CDS 35.0%
TAAGACAATGAAGAAAGCTG+AGG - chr1.3:32483440-32483459 MS.gene84039:CDS 35.0%
TATGTTCCACTTTGATCTCT+TGG + chr1.3:32482455-32482474 None:intergenic 35.0%
TATTTCGACTACAACGATCT+TGG - chr1.3:32483966-32483985 MS.gene84039:CDS 35.0%
TCAGATCTAAAGATGCTGAA+GGG + chr1.3:32483068-32483087 None:intergenic 35.0%
TCGAATGGAGATAAGTATGA+GGG - chr1.3:32482206-32482225 MS.gene84039:intron 35.0%
TTCAAGAGTGGTTATATGGA+TGG - chr1.3:32482095-32482114 MS.gene84039:intron 35.0%
TTCAGATCTAAAGATGCTGA+AGG + chr1.3:32483069-32483088 None:intergenic 35.0%
TTCGAATGGAGATAAGTATG+AGG - chr1.3:32482205-32482224 MS.gene84039:intron 35.0%
TTGAAAGTTCCATTCCCTTT+AGG + chr1.3:32482389-32482408 None:intergenic 35.0%
! AACTCAGTATACACTTGTTG+TGG + chr1.3:32482530-32482549 None:intergenic 35.0%
! ACTATTGCCCAGTAGTTTTT+AGG - chr1.3:32483190-32483209 MS.gene84039:CDS 35.0%
! AGTAATGGGAATAGGTATGA+TGG - chr1.3:32482344-32482363 MS.gene84039:CDS 35.0%
! ATGGACTATAGTCTACTAGT+TGG - chr1.3:32484184-32484203 MS.gene84039:CDS 35.0%
! CAAATCAAAGCGTCTATGTA+TGG + chr1.3:32483858-32483877 None:intergenic 35.0%
! GCTCTAGTGACAAAGTTTTA+TGG - chr1.3:32483611-32483630 MS.gene84039:intron 35.0%
! GGTTCATTTGTTTGGAGTAA+TGG - chr1.3:32482329-32482348 MS.gene84039:CDS 35.0%
! GTAATGGGAATAGGTATGAT+GGG - chr1.3:32482345-32482364 MS.gene84039:CDS 35.0%
! GTCATATTGAATGGACTTGT+AGG + chr1.3:32484708-32484727 None:intergenic 35.0%
! TAGTAGTATGATGAAGGCAT+GGG - chr1.3:32481767-32481786 MS.gene84039:CDS 35.0%
! TTGTTTGGAGTAATGGGAAT+AGG - chr1.3:32482336-32482355 MS.gene84039:CDS 35.0%
!! ACATAGACGCTTTGATTTGA+AGG - chr1.3:32483859-32483878 MS.gene84039:CDS 35.0%
!! CATAGACGCTTTGATTTGAA+GGG - chr1.3:32483860-32483879 MS.gene84039:CDS 35.0%
!! GAATAGGTATGATGGGTATT+GGG - chr1.3:32482352-32482371 MS.gene84039:CDS 35.0%
!! TCTTTGGAATCAAAAGCTGA+AGG + chr1.3:32483093-32483112 None:intergenic 35.0%
!!! ATCAAGATCTTTTAGGATGG+TGG + chr1.3:32483936-32483955 None:intergenic 35.0%
!!! GGTGATGGAAGTTTTTATGT+AGG - chr1.3:32482413-32482432 MS.gene84039:intron 35.0%
!!! GTTCTGAGGGAATTTTTAAG+AGG + chr1.3:32483285-32483304 None:intergenic 35.0%
AAGGATCCAAGAGATCAAAG+TGG - chr1.3:32482446-32482465 MS.gene84039:intron 40.0%
ACCAAAGAAATCAAAGAGGC+AGG - chr1.3:32482868-32482887 MS.gene84039:intron 40.0%
ACCTCATAGTACTCTCCAAT+TGG + chr1.3:32484620-32484639 None:intergenic 40.0%
ACTGGTAATAGAACTCCAAC+TGG - chr1.3:32482761-32482780 MS.gene84039:intron 40.0%
AGGCGTATATTTGGATCCTT+CGG + chr1.3:32483139-32483158 None:intergenic 40.0%
AGTGAGTATCAAGTTAGTCC+TGG - chr1.3:32482551-32482570 MS.gene84039:intron 40.0%
ATAGCTTCCTAAGAGTTCTG+AGG + chr1.3:32483299-32483318 None:intergenic 40.0%
ATATTGGGGAATGGAGGAAT+GGG - chr1.3:32482291-32482310 MS.gene84039:intron 40.0%
ATGTCTTCTCGTGAAATACG+GGG + chr1.3:32484395-32484414 None:intergenic 40.0%
CAGATCTAAAGATGCTGAAG+GGG + chr1.3:32483067-32483086 None:intergenic 40.0%
CATGTCTTCTCGTGAAATAC+GGG + chr1.3:32484396-32484415 None:intergenic 40.0%
CCAAAGAAATCAAAGAGGCA+GGG - chr1.3:32482869-32482888 MS.gene84039:intron 40.0%
CCATGTCTTCTCGTGAAATA+CGG + chr1.3:32484397-32484416 None:intergenic 40.0%
GAAAAACTATGGGAAAGGGA+AGG - chr1.3:32482036-32482055 MS.gene84039:intron 40.0%
GAACATATTATCCTTCTCCC+GGG - chr1.3:32482468-32482487 MS.gene84039:intron 40.0%
GAAGGAATAAGATCTCCTTC+TGG + chr1.3:32484232-32484251 None:intergenic 40.0%
GAAGGAGATCTTATTCCTTC+AGG - chr1.3:32484232-32484251 MS.gene84039:CDS 40.0%
GAGATAAGTATGAGGGAGAA+TGG - chr1.3:32482213-32482232 MS.gene84039:intron 40.0%
GATAGAATGCATTTATGGGG+CGG - chr1.3:32482710-32482729 MS.gene84039:CDS 40.0%
GATGGTAATAGAACTCCAAC+TGG - chr1.3:32482743-32482762 MS.gene84039:intron 40.0%
GATTGTGAATTGCAACTCGT+AGG - chr1.3:32484590-32484609 MS.gene84039:CDS 40.0%
GATTTGAAGGGTTCTTCACT+TGG - chr1.3:32483872-32483891 MS.gene84039:CDS 40.0%
GGAACATATTATCCTTCTCC+CGG - chr1.3:32482467-32482486 MS.gene84039:intron 40.0%
GGAGTTCAAGAGTGGTTATA+TGG - chr1.3:32482091-32482110 MS.gene84039:intron 40.0%
GGGAATGGAACTTTCAAATG+GGG - chr1.3:32482392-32482411 MS.gene84039:CDS 40.0%
GGGATACTTATAAGGGACAA+TGG - chr1.3:32482144-32482163 MS.gene84039:CDS 40.0%
GGGGTAAAGGTTCATTTGTT+TGG - chr1.3:32482321-32482340 MS.gene84039:CDS 40.0%
GGTGCTTTCAAAGTTTGTCT+TGG + chr1.3:32482851-32482870 None:intergenic 40.0%
GTGAGTATCAAGTTAGTCCT+GGG - chr1.3:32482552-32482571 MS.gene84039:intron 40.0%
GTGCATACACTGCTACTAAT+GGG - chr1.3:32482123-32482142 MS.gene84039:intron 40.0%
GTTGGAGTTCTATTACCAGT+TGG + chr1.3:32482761-32482780 None:intergenic 40.0%
GTTTCAGTAATCTCTGACTC+AGG + chr1.3:32483914-32483933 None:intergenic 40.0%
TATATTGGGGAATGGAGGAA+TGG - chr1.3:32482290-32482309 MS.gene84039:intron 40.0%
TATGTCGGAGAATGGTTCAA+AGG - chr1.3:32482014-32482033 MS.gene84039:CDS 40.0%
TCTTAGGAAGCTATTCAAGG+TGG - chr1.3:32483305-32483324 MS.gene84039:intron 40.0%
TGAGTATCAAGTTAGTCCTG+GGG - chr1.3:32482553-32482572 MS.gene84039:intron 40.0%
TGCATACACTGCTACTAATG+GGG - chr1.3:32482124-32482143 MS.gene84039:intron 40.0%
TGCTAATAATGTGTGTGCCT+TGG + chr1.3:32483501-32483520 None:intergenic 40.0%
TTCCATTTGAACTCACTGGA+CGG + chr1.3:32483168-32483187 None:intergenic 40.0%
TTGATCCAAGGCAATACTCA+AGG - chr1.3:32484747-32484766 MS.gene84039:CDS 40.0%
! AAGAAGTATACCATGCAGAG+AGG - chr1.3:32481901-32481920 MS.gene84039:CDS 40.0%
! AGAAGTATACCATGCAGAGA+GGG - chr1.3:32481902-32481921 MS.gene84039:CDS 40.0%
! TAGCTTCCTAAGAGTTCTGA+GGG + chr1.3:32483298-32483317 None:intergenic 40.0%
! TCTGGAACAAGAGGGAATTA+TGG - chr1.3:32484165-32484184 MS.gene84039:CDS 40.0%
! TGAGTATTGCCTTGGATCAA+CGG + chr1.3:32484747-32484766 None:intergenic 40.0%
!! AATGGAGGAATGGGAGTATT+TGG - chr1.3:32482300-32482319 MS.gene84039:CDS 40.0%
!! AATGGGAGTATTTGGGGTAA+AGG - chr1.3:32482308-32482327 MS.gene84039:CDS 40.0%
!! ACCAATTGGAGAGTACTATG+AGG - chr1.3:32484616-32484635 MS.gene84039:CDS 40.0%
!! AGGTACACCTTTTTCTGAGA+AGG + chr1.3:32483662-32483681 None:intergenic 40.0%
!! ATGGAGGAATGGGAGTATTT+GGG - chr1.3:32482301-32482320 MS.gene84039:CDS 40.0%
!! GGAATAGGTATGATGGGTAT+TGG - chr1.3:32482351-32482370 MS.gene84039:CDS 40.0%
!! TATGATGGGTATTGGGAAGA+TGG - chr1.3:32482359-32482378 MS.gene84039:CDS 40.0%
!!! AAGAAGCTTCCACTTTTTCC+TGG + chr1.3:32483390-32483409 None:intergenic 40.0%
AAAACTGAAACCTTCTCCCC+AGG + chr1.3:32482572-32482591 None:intergenic 45.0%
AACTTCTGCTAGATCCTTCC+AGG - chr1.3:32484420-32484439 MS.gene84039:CDS 45.0%
ACTGCAAGTCTCTTCTGTGA+TGG + chr1.3:32482596-32482615 None:intergenic 45.0%
AGAAGAATGTCAGTGGATGC+AGG - chr1.3:32482656-32482675 MS.gene84039:CDS 45.0%
AGTATGAGGGAGAATGGAGA+AGG - chr1.3:32482219-32482238 MS.gene84039:intron 45.0%
AGTGGAGTATGAGATCCTGA+AGG + chr1.3:32484250-32484269 None:intergenic 45.0%
ATCCGTCCAGTGAGTTCAAA+TGG - chr1.3:32483163-32483182 MS.gene84039:CDS 45.0%
ATGATCTCAGGCAAATCGAC+AGG - chr1.3:32484131-32484150 MS.gene84039:CDS 45.0%
ATGGACAAGGGAGATATGAG+TGG - chr1.3:32482252-32482271 MS.gene84039:intron 45.0%
CAACTCGTAGGAGAACCAAT+TGG - chr1.3:32484602-32484621 MS.gene84039:CDS 45.0%
CCGTATTTCACGAGAAGACA+TGG - chr1.3:32484394-32484413 MS.gene84039:CDS 45.0%
CGAGGTTGGGTCATATTGAA+TGG + chr1.3:32484717-32484736 None:intergenic 45.0%
CTTTCTTCGCCAGGAAAAAG+TGG - chr1.3:32483378-32483397 MS.gene84039:CDS 45.0%
GAAGAATGTCAGTGGATGCA+GGG - chr1.3:32482657-32482676 MS.gene84039:CDS 45.0%
GCAAGAGGGTCATCTTGATT+GGG - chr1.3:32482502-32482521 MS.gene84039:intron 45.0%
GCATCCACTGACATTCTTCT+CGG + chr1.3:32482656-32482675 None:intergenic 45.0%
GGAACTTTCAAATGGGGTGA+TGG - chr1.3:32482398-32482417 MS.gene84039:CDS 45.0%
GGATCTCATACTCCACTTGA+TGG - chr1.3:32484253-32484272 MS.gene84039:CDS 45.0%
GGCGTATATTTGGATCCTTC+GGG + chr1.3:32483138-32483157 None:intergenic 45.0%
GGTGAGACGAGTTATTCGAA+TGG - chr1.3:32482191-32482210 MS.gene84039:intron 45.0%
GGTGCATACACTGCTACTAA+TGG - chr1.3:32482122-32482141 MS.gene84039:intron 45.0%
GTATATTTGGATCCTTCGGG+AGG + chr1.3:32483135-32483154 None:intergenic 45.0%
GTATGAGGGAGAATGGAGAA+GGG - chr1.3:32482220-32482239 MS.gene84039:intron 45.0%
GTCCAGTGAGTTCAAATGGA+AGG - chr1.3:32483167-32483186 MS.gene84039:CDS 45.0%
GTCCTTCCATTTGAACTCAC+TGG + chr1.3:32483172-32483191 None:intergenic 45.0%
GTTGGAGTTCTACTACCAGT+TGG + chr1.3:32482779-32482798 None:intergenic 45.0%
TAAGCCGAGAAGAATGTCAG+TGG - chr1.3:32482649-32482668 MS.gene84039:CDS 45.0%
TAGGAGTGAATATGCCAGCA+CGG - chr1.3:32484543-32484562 MS.gene84039:CDS 45.0%
TATGAAGGGGAGTTCAAGAG+TGG - chr1.3:32482083-32482102 MS.gene84039:intron 45.0%
TATGAGGGAGAATGGAGAAG+GGG - chr1.3:32482221-32482240 MS.gene84039:intron 45.0%
TGATCTCAGGCAAATCGACA+GGG - chr1.3:32484132-32484151 MS.gene84039:CDS 45.0%
TGCAAGAGGGTCATCTTGAT+TGG - chr1.3:32482501-32482520 MS.gene84039:intron 45.0%
TTAGGTGATTCAGAGGGTGA+AGG - chr1.3:32484365-32484384 MS.gene84039:CDS 45.0%
TTGAACTCCCCTTCATAAGC+TGG + chr1.3:32482080-32482099 None:intergenic 45.0%
! AAACGCCTTGAGTATTGCCT+TGG + chr1.3:32484755-32484774 None:intergenic 45.0%
! CAGGGCATCATTTCCACATA+TGG + chr1.3:32483352-32483371 None:intergenic 45.0%
! CCCTGCCTCTTTGATTTCTT+TGG + chr1.3:32482872-32482891 None:intergenic 45.0%
! GATGGTTTGCCTAAAGGGAA+TGG - chr1.3:32482377-32482396 MS.gene84039:CDS 45.0%
! GGGAAGATGGTTTGCCTAAA+GGG - chr1.3:32482372-32482391 MS.gene84039:CDS 45.0%
! TAGTATGATGAAGGCATGGG+AGG - chr1.3:32481770-32481789 MS.gene84039:CDS 45.0%
! TGGGAAGATGGTTTGCCTAA+AGG - chr1.3:32482371-32482390 MS.gene84039:CDS 45.0%
! TTTTCGAAAGACGTGTGACC+TGG + chr1.3:32484441-32484460 None:intergenic 45.0%
!! ACGGGAAAGGGAAGTACTTA+TGG - chr1.3:32481976-32481995 MS.gene84039:CDS 45.0%
!! GGGAAGTACTTATGGACAGA+TGG - chr1.3:32481984-32482003 MS.gene84039:CDS 45.0%
!! TGGAGGAATGGGAGTATTTG+GGG - chr1.3:32482302-32482321 MS.gene84039:CDS 45.0%
!! ATTCATATTTATAAAATTTA+TGG - chr1.3:32483782-32483801 MS.gene84039:CDS 5.0%
!! CTTAATAATAAAAATTAATA+AGG + chr1.3:32483224-32483243 None:intergenic 5.0%
AAGTACTTCCCTTTCCCGTG+CGG + chr1.3:32481975-32481994 None:intergenic 50.0%
AATGTCAGTGGATGCAGGGA+GGG - chr1.3:32482661-32482680 MS.gene84039:CDS 50.0%
AGAAGAGACTTGCAGTGTGG+AGG - chr1.3:32482600-32482619 MS.gene84039:CDS 50.0%
AGAATGCATTTATGGGGCGG+CGG - chr1.3:32482713-32482732 MS.gene84039:CDS 50.0%
AGAATGGAGAAGGGGTTTGC+AGG - chr1.3:32482229-32482248 MS.gene84039:intron 50.0%
AGGAGTGAATATGCCAGCAC+GGG - chr1.3:32484544-32484563 MS.gene84039:CDS 50.0%
ATAACTTCCCGCACGGGAAA+GGG - chr1.3:32481964-32481983 MS.gene84039:CDS 50.0%
CAACGGCTGAAATCGAGGTT+GGG + chr1.3:32484730-32484749 None:intergenic 50.0%
CACAGAAGAGACTTGCAGTG+TGG - chr1.3:32482597-32482616 MS.gene84039:CDS 50.0%
CAGGGAGAGACCATATGCAA+AGG - chr1.3:32482887-32482906 MS.gene84039:intron 50.0%
CGATTTCAGCCGTTGATCCA+AGG - chr1.3:32484735-32484754 MS.gene84039:CDS 50.0%
CTCTTGCAATTGCGATGACC+CGG + chr1.3:32482489-32482508 None:intergenic 50.0%
CTTCAGGGCCAGCTTATGAA+GGG - chr1.3:32482069-32482088 MS.gene84039:intron 50.0%
GCAGAGAGGGTTCTACCTAA+TGG - chr1.3:32481915-32481934 MS.gene84039:CDS 50.0%
GGGTCATCGCAATTGCAAGA+GGG - chr1.3:32482488-32482507 MS.gene84039:intron 50.0%
TAGGTAGAACCCTCTCTGCA+TGG + chr1.3:32481914-32481933 None:intergenic 50.0%
TCAACGGCTGAAATCGAGGT+TGG + chr1.3:32484731-32484750 None:intergenic 50.0%
TCAAGTTAGTCCTGGGGAGA+AGG - chr1.3:32482559-32482578 MS.gene84039:intron 50.0%
TCTAAAGATGCTGAAGGGGC+AGG + chr1.3:32483063-32483082 None:intergenic 50.0%
TCTTGCAATTGCGATGACCC+GGG + chr1.3:32482488-32482507 None:intergenic 50.0%
TGGATCAACGGCTGAAATCG+AGG + chr1.3:32484735-32484754 None:intergenic 50.0%
TGGGAAAGGGAAGGTTCACT+TGG - chr1.3:32482045-32482064 MS.gene84039:intron 50.0%
TTCAGGGCCAGCTTATGAAG+GGG - chr1.3:32482070-32482089 MS.gene84039:intron 50.0%
TTGAACTCACTGGACGGATG+TGG + chr1.3:32483162-32483181 None:intergenic 50.0%
! ATATGCCAGCACGGGTTGAA+AGG - chr1.3:32484552-32484571 MS.gene84039:CDS 50.0%
! CGGATGTGGAGGCGTATATT+TGG + chr1.3:32483148-32483167 None:intergenic 50.0%
! GAAGGTTCACTTGGCCTTCA+GGG - chr1.3:32482054-32482073 MS.gene84039:intron 50.0%
! TGGACTAGATTTCCTCCCGA+AGG - chr1.3:32483120-32483139 MS.gene84039:CDS 50.0%
!! TGCGAGCTTCTGGAACAAGA+GGG - chr1.3:32484157-32484176 MS.gene84039:CDS 50.0%
!! TGGGTTGATAACTTCCCGCA+CGG - chr1.3:32481957-32481976 MS.gene84039:CDS 50.0%
AACTCACTGGACGGATGTGG+AGG + chr1.3:32483159-32483178 None:intergenic 55.0%
AATGCATTTATGGGGCGGCG+GGG - chr1.3:32482715-32482734 MS.gene84039:CDS 55.0%
AATTGCGATGACCCGGGAGA+AGG + chr1.3:32482482-32482501 None:intergenic 55.0%
ACTGTCCTTTCAACCCGTGC+TGG + chr1.3:32484560-32484579 None:intergenic 55.0%
AGGGGTTTGCAGGATGGACA+AGG - chr1.3:32482239-32482258 MS.gene84039:intron 55.0%
AGTACTTCCCTTTCCCGTGC+GGG + chr1.3:32481974-32481993 None:intergenic 55.0%
AGTGTGGAGGTCTACCAAGG+GGG - chr1.3:32482613-32482632 MS.gene84039:CDS 55.0%
ATGCAGGGAGGGCAAGTGTA+GGG - chr1.3:32482672-32482691 MS.gene84039:CDS 55.0%
CAGTGTGGAGGTCTACCAAG+GGG - chr1.3:32482612-32482631 MS.gene84039:CDS 55.0%
CCTTCAGGGCCAGCTTATGA+AGG - chr1.3:32482068-32482087 MS.gene84039:intron 55.0%
CCTTCATAAGCTGGCCCTGA+AGG + chr1.3:32482071-32482090 None:intergenic 55.0%
CGAAAGACGTGTGACCTGGA+AGG + chr1.3:32484437-32484456 None:intergenic 55.0%
CGGGTCATCGCAATTGCAAG+AGG - chr1.3:32482487-32482506 MS.gene84039:intron 55.0%
GAATGCATTTATGGGGCGGC+GGG - chr1.3:32482714-32482733 MS.gene84039:CDS 55.0%
GAATGTCAGTGGATGCAGGG+AGG - chr1.3:32482660-32482679 MS.gene84039:CDS 55.0%
GATAACTTCCCGCACGGGAA+AGG - chr1.3:32481963-32481982 MS.gene84039:CDS 55.0%
GCAGTGTGGAGGTCTACCAA+GGG - chr1.3:32482611-32482630 MS.gene84039:CDS 55.0%
GGGGTTTGCAGGATGGACAA+GGG - chr1.3:32482240-32482259 MS.gene84039:intron 55.0%
TGCAGTGTGGAGGTCTACCA+AGG - chr1.3:32482610-32482629 MS.gene84039:CDS 55.0%
TGCCTGTGTCTTCTTCACCG+TGG + chr1.3:32481796-32481815 None:intergenic 55.0%
TGGAGAAGGGGTTTGCAGGA+TGG - chr1.3:32482233-32482252 MS.gene84039:intron 55.0%
TGGCGAAGAAAGTTCGCGCA+GGG + chr1.3:32483370-32483389 None:intergenic 55.0%
! GGAAGGTTCACTTGGCCTTC+AGG - chr1.3:32482053-32482072 MS.gene84039:intron 55.0%
!! CTGCGAGCTTCTGGAACAAG+AGG - chr1.3:32484156-32484175 MS.gene84039:CDS 55.0%
!! GGGTTGATAACTTCCCGCAC+GGG - chr1.3:32481958-32481977 MS.gene84039:CDS 55.0%
AGCACTACCACCATCCCCCT+TGG + chr1.3:32482630-32482649 None:intergenic 60.0%
AGGTCTACCAAGGGGGATGG+TGG - chr1.3:32482620-32482639 MS.gene84039:CDS 60.0%
CTGCGCGAACTTTCTTCGCC+AGG - chr1.3:32483369-32483388 MS.gene84039:CDS 60.0%
CTGGCGAAGAAAGTTCGCGC+AGG + chr1.3:32483371-32483390 None:intergenic 60.0%
GATGCAGGGAGGGCAAGTGT+AGG - chr1.3:32482671-32482690 MS.gene84039:CDS 60.0%
GGCCACGGTGAAGAAGACAC+AGG - chr1.3:32481791-32481810 MS.gene84039:CDS 60.0%
TGGAGGTCTACCAAGGGGGA+TGG - chr1.3:32482617-32482636 MS.gene84039:CDS 60.0%
! GATGAAGGCATGGGAGGCCA+CGG - chr1.3:32481776-32481795 MS.gene84039:CDS 60.0%
CATTTATGGGGCGGCGGGGA+AGG - chr1.3:32482719-32482738 MS.gene84039:CDS 65.0%
CGACAGGGACTGCGAGCTTC+TGG - chr1.3:32484147-32484166 MS.gene84039:CDS 65.0%
TGGGGCGGCGGGGAAGGTGA+TGG - chr1.3:32482725-32482744 MS.gene84039:CDS 75.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 32481753 32484814 32481753 ID=MS.gene84039
chr1.3 mRNA 32481753 32484814 32481753 ID=MS.gene84039.t1;Parent=MS.gene84039
chr1.3 exon 32483613 32484814 32483613 ID=MS.gene84039.t1.exon1;Parent=MS.gene84039.t1
chr1.3 CDS 32483613 32484814 32483613 ID=cds.MS.gene84039.t1;Parent=MS.gene84039.t1
chr1.3 exon 32483356 32483523 32483356 ID=MS.gene84039.t1.exon2;Parent=MS.gene84039.t1
chr1.3 CDS 32483356 32483523 32483356 ID=cds.MS.gene84039.t1;Parent=MS.gene84039.t1
chr1.3 exon 32483100 32483265 32483100 ID=MS.gene84039.t1.exon3;Parent=MS.gene84039.t1
chr1.3 CDS 32483100 32483265 32483100 ID=cds.MS.gene84039.t1;Parent=MS.gene84039.t1
chr1.3 exon 32482894 32483010 32482894 ID=MS.gene84039.t1.exon4;Parent=MS.gene84039.t1
chr1.3 CDS 32482894 32483010 32482894 ID=cds.MS.gene84039.t1;Parent=MS.gene84039.t1
chr1.3 exon 32482562 32482755 32482562 ID=MS.gene84039.t1.exon5;Parent=MS.gene84039.t1
chr1.3 CDS 32482562 32482755 32482562 ID=cds.MS.gene84039.t1;Parent=MS.gene84039.t1
chr1.3 exon 32482293 32482426 32482293 ID=MS.gene84039.t1.exon6;Parent=MS.gene84039.t1
chr1.3 CDS 32482293 32482426 32482293 ID=cds.MS.gene84039.t1;Parent=MS.gene84039.t1
chr1.3 exon 32482126 32482198 32482126 ID=MS.gene84039.t1.exon7;Parent=MS.gene84039.t1
chr1.3 CDS 32482126 32482198 32482126 ID=cds.MS.gene84039.t1;Parent=MS.gene84039.t1
chr1.3 exon 32481753 32482041 32481753 ID=MS.gene84039.t1.exon8;Parent=MS.gene84039.t1
chr1.3 CDS 32481753 32482041 32481753 ID=cds.MS.gene84039.t1;Parent=MS.gene84039.t1
Gene Sequence

>MS.gene84039

ATGATGGGCAAAGATAGTAGTATGATGAAGGCATGGGAGGCCACGGTGAAGAAGACACAGGCAGTTGCGAAGAAGCGTGCAAATAGCATATTTGGATCAACATATGTAGCTTCACAACATGGAGATCATGAAGAAGAAAGCAAGGATGAAGAAGTATACCATGCAGAGAGGGTTCTACCTAATGGAGATTACTATAAAGGAGAATGGGTTGATAACTTCCCGCACGGGAAAGGGAAGTACTTATGGACAGATGGATGTATATATGTCGGAGAATGGTTCAAAGGAAAAACTATGGGAAAGGGAAGGTTCACTTGGCCTTCAGGGCCAGCTTATGAAGGGGAGTTCAAGAGTGGTTATATGGATGGAATAGGTGCATACACTGCTACTAATGGGGATACTTATAAGGGACAATGGGTAATGAATTTGAAACATGGTCATGGTGAGACGAGTTATTCGAATGGAGATAAGTATGAGGGAGAATGGAGAAGGGGTTTGCAGGATGGACAAGGGAGATATGAGTGGAAAGATGAAAACTATTATATTGGGGAATGGAGGAATGGGAGTATTTGGGGTAAAGGTTCATTTGTTTGGAGTAATGGGAATAGGTATGATGGGTATTGGGAAGATGGTTTGCCTAAAGGGAATGGAACTTTCAAATGGGGTGATGGAAGTTTTTATGTAGGTAATTGGAGTAAGGATCCAAGAGATCAAAGTGGAACATATTATCCTTCTCCCGGGTCATCGCAATTGCAAGAGGGTCATCTTGATTGGGAACCACAACAAGTGTATACTGAGTTGAGTGAGTATCAAGTTAGTCCTGGGGAGAAGGTTTCAGTTTTGCCATCACAGAAGAGACTTGCAGTGTGGAGGTCTACCAAGGGGGATGGTGGTAGTGCTAAGCCGAGAAGAATGTCAGTGGATGCAGGGAGGGCAAGTGTAGGGCTTGAAAAACCAAGTGATAGAATGCATTTATGGGGCGGCGGGGAAGGTGATGGTAATAGAACTCCAACTGGTAATAGAACTCCAACTGGTAGTAGAACTCCAACTAAAGATGATCATGAGTTGCTTGGTTTACATTTACATGCTTCCAATAATCCAAGACAAACTTTGAAAGCACCAAAGAAATCAAAGAGGCAGGGAGAGACCATATGCAAAGGACACAAGAATTATGAGCTCATGCTCAATTTACAATTAGGAATAAGGTAACGTATTTTTTTTTTTTTTAAGAAACAAAAACTAACAATGTAGCATTATTATTCATGATAATTGTTTGAGTTGTTGCATATAATAGGCATTCTGTTGGAAGACCTGCCCCTTCAGCATCTTTAGATCTGAAGCCTTCAGCTTTTGATTCCAAAGAAAAAGTATGGACTAGATTTCCTCCCGAAGGATCCAAATATACGCCTCCACATCCGTCCAGTGAGTTCAAATGGAAGGACTATTGCCCAGTAGTTTTTAGGTAGTTAATCCTTATTAATTTTTATTATTAAGTTCCCTTTTGCATATTATAATTGATCAACATATAACTACCTCTTAAAAATTCCCTCAGAACTCTTAGGAAGCTATTCAAGGTGGATGCAGCTGATTACATGTTATCCATATGTGGAAATGATGCCCTGCGCGAACTTTCTTCGCCAGGAAAAAGTGGAAGCTTCTTTTACTTGACCAATGATGACCGTTATATGATTAAGACAATGAAGAAAGCTGAGGCTAAAGTGAGTTTCATACTAATTCTCTTATCGAAACCAAGGCACACACATTATTAGCATAATATTGATTTGGACATGCTGATTTTATTTTGCAGGCTCTCTTGAGAATGCTTCCCGCTTATTACAATCATTTTCGAGCATTTGAAAATGCTCTAGTGACAAAGTTTTATGGTTTACATTGTGTCAAGTTAAATGGACCTTCTCAGAAAAAGGTGTACCTAAATGTTGTAGACGATTTTTATTGTTTAAAAAAATTTAAGCATTTACTAGTATCTATTCTTATAGGAAAGCATACATTTCTAGTAAGAGAGAACTAAGAAATTCATATTTATAAAATTTATGGATTTCAGGTACGATTTATCATAATGGGCAACCTTTTTTGTTCTGAGTATACCATACATAGACGCTTTGATTTGAAGGGTTCTTCACTTGGGCGCATAACGACTAAGCCTGAGTCAGAGATTACTGAAACCACCATCCTAAAAGATCTTGATCTAAATTTTATATTTCGACTACAACGATCTTGGTTTTTAGAATTTTGCAGGTGATAAAAGTTAAATGTATTATAGCAAATTTTAATGTGACCTAGCTAGCTATCATATATCATATTTCTATTTTTACCTTCTCGAAAAGAATAAGCAATTGAACCATGTCATGTGTTTGTTATATATGATCTCAGGCAAATCGACAGGGACTGCGAGCTTCTGGAACAAGAGGGAATTATGGACTATAGTCTACTAGTTGGCATTCATTTCAAAGATATATCACCAGAAGGAGATCTTATTCCTTCAGGATCTCATACTCCACTTGATGGTATTTTTCTTATCCATAATAGTATATATCTTATCTTAATTTTTGTTCATCCTCATTAAATTCCTAGAAAAACATTTTGGATGTTCAAATTTAGGTGATTCAGAGGGTGAAGGAACGCCCCGTATTTCACGAGAAGACATGGATCAACTTCTGCTAGATCCTTCCAGGTCACACGTCTTTCGAAAATTTTAATATAGAATCAATGTCTATGAGATAAATTCTTAAAACAATTATTGTATATTTGTTTGTAGATGGGCAAGTATCAAATTAGGAGTGAATATGCCAGCACGGGTTGAAAGGACAGTGAGAACAAGTGATTGTGAATTGCAACTCGTAGGAGAACCAATTGGAGAGTACTATGAGGTTGTCTTGTTTTTCGGTATCATTGACATACTTCAAGACTATGATATCAGCAAGAAGCTTGAGCATGCCTACAAGTCCATTCAATATGACCCAACCTCGATTTCAGCCGTTGATCCAAGGCAATACTCAAGGCGTTTTCGTGACTTCATATTCAAAATATTTTCACAAGATTCTTGA
Protein sequence

>MS.gene84039.t1

MMGKDSSMMKAWEATVKKTQAVAKKRANSIFGSTYVASQHGDHEEESKDEEVYHAERVLPNGDYYKGEWVDNFPHGKGKYLWTDGCIYVGEWFKGKTMGKGRFTWPSGPAYEGEFKSGYMDGIGAYTATNGDTYKGQWVMNLKHGHGETSYSNGDKYEGEWRRGLQDGQGRYEWKDENYYIGEWRNGSIWGKGSFVWSNGNRYDGYWEDGLPKGNGTFKWGDGSFYVGNWSKDPRDQSGTYYPSPGSSQLQEGHLDWEPQQVYTELSEYQVSPGEKVSVLPSQKRLAVWRSTKGDGGSAKPRRMSVDAGRASVGLEKPSDRMHLWGGGEGDGNRTPTGNRTPTGSRTPTKDDHELLGLHLHASNNPRQTLKAPKKSKRQGETICKGHKNYELMLNLQLGIRHSVGRPAPSASLDLKPSAFDSKEKVWTRFPPEGSKYTPPHPSSEFKWKDYCPVVFRTLRKLFKVDAADYMLSICGNDALRELSSPGKSGSFFYLTNDDRYMIKTMKKAEAKALLRMLPAYYNHFRAFENALVTKFYGLHCVKLNGPSQKKVRFIIMGNLFCSEYTIHRRFDLKGSSLGRITTKPESEITETTILKDLDLNFIFRLQRSWFLEFCRQIDRDCELLEQEGIMDYSLLVGIHFKDISPEGDLIPSGSHTPLDGDSEGEGTPRISREDMDQLLLDPSRWASIKLGVNMPARVERTVRTSDCELQLVGEPIGEYYEVVLFFGIIDILQDYDISKKLEHAYKSIQYDPTSISAVDPRQYSRRFRDFIFKIFSQDS