Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84543.t1 | XP_003600475.1 | 98.4 | 254 | 4 | 0 | 17 | 270 | 6 | 259 | 6.80E-141 | 510 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84543.t1 | Q8C5Q4 | 34.4 | 224 | 108 | 4 | 69 | 255 | 250 | 471 | 1.5e-24 | 114.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84543.t1 | G7J263 | 98.4 | 254 | 4 | 0 | 17 | 270 | 6 | 259 | 4.9e-141 | 510.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene84543 | MS.gene60814 | PPI |
| MS.gene84543 | MS.gene33973 | PPI |
| MS.gene84543 | MS.gene006028 | PPI |
| MS.gene84543 | MS.gene041727 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84543.t1 | MTR_3g061590 | 98.425 | 254 | 4 | 0 | 17 | 270 | 6 | 259 | 0.0 | 513 |
| MS.gene84543.t1 | MTR_8g073580 | 50.980 | 255 | 113 | 4 | 23 | 270 | 40 | 289 | 6.15e-74 | 228 |
| MS.gene84543.t1 | MTR_8g073580 | 53.110 | 209 | 87 | 3 | 69 | 270 | 38 | 242 | 4.81e-71 | 219 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84543.t1 | AT3G20890 | 60.274 | 292 | 78 | 4 | 15 | 270 | 3 | 292 | 1.41e-109 | 318 |
| MS.gene84543.t1 | AT3G20890 | 58.128 | 203 | 52 | 1 | 101 | 270 | 27 | 229 | 1.83e-78 | 237 |
| MS.gene84543.t1 | AT5G66010 | 49.587 | 242 | 109 | 5 | 21 | 258 | 10 | 242 | 1.22e-73 | 226 |
| MS.gene84543.t1 | AT5G66010 | 48.630 | 146 | 70 | 2 | 117 | 258 | 1 | 145 | 2.03e-43 | 145 |
Find 75 sgRNAs with CRISPR-Local
Find 87 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGCTTATTGACTTCAATTT+TGG | 0.156518 | 3.1:-46261152 | MS.gene84543:CDS |
| CGGTGAAGGCTTCTGTGTTT+TGG | 0.182250 | 3.1:-46260840 | MS.gene84543:CDS |
| ATCCACATTGTAATGAATTC+AGG | 0.251651 | 3.1:-46260524 | MS.gene84543:CDS |
| TCATCCTTATTAGCAGAAAA+TGG | 0.345506 | 3.1:+46260590 | None:intergenic |
| AGATGGATTGTACATATAAC+TGG | 0.382208 | 3.1:+46261018 | None:intergenic |
| ACTTTGCTCTTCAAAGAAAC+AGG | 0.406141 | 3.1:-46260799 | MS.gene84543:CDS |
| TGCTAATAAGGATGACATAA+TGG | 0.410596 | 3.1:-46260582 | MS.gene84543:CDS |
| TCCATCTCACCATGCGTTGA+AGG | 0.422533 | 3.1:+46260392 | None:intergenic |
| CTACAAGGCAGTTGCAAATG+AGG | 0.438613 | 3.1:-46260723 | MS.gene84543:CDS |
| CGCAGTCGAACAACAGGAAA+TGG | 0.442842 | 3.1:+46260962 | None:intergenic |
| AGACCGCGCAGTCGAACAAC+AGG | 0.447152 | 3.1:+46260956 | None:intergenic |
| CTTCATCATATGATTTAGCT+CGG | 0.461470 | 3.1:+46260660 | None:intergenic |
| TCTTCATTCTATGATTCCCC+TGG | 0.465549 | 3.1:-46261043 | MS.gene84543:CDS |
| ACCATCTGGGGAGGCTTATG+TGG | 0.470749 | 3.1:-46260495 | MS.gene84543:CDS |
| ATATGATGAAGGAAAAGATT+CGG | 0.489693 | 3.1:-46260648 | MS.gene84543:CDS |
| CTTCAAGGAGTATGTGTTGT+CGG | 0.500765 | 3.1:-46260555 | MS.gene84543:CDS |
| CACAGGAGTGTTGCGACTGA+GGG | 0.505697 | 3.1:-46260618 | MS.gene84543:CDS |
| ATGTACAATCCATCTCCATA+TGG | 0.508179 | 3.1:-46261010 | MS.gene84543:CDS |
| CTCGGGGAGCACTACGACGA+GGG | 0.508597 | 3.1:+46260678 | None:intergenic |
| ACAGGAAATGGTGGAGGAGG+AGG | 0.509420 | 3.1:+46260974 | None:intergenic |
| TCCACATTGTAATGAATTCA+GGG | 0.513953 | 3.1:-46260523 | MS.gene84543:CDS |
| TTCATCATATGATTTAGCTC+GGG | 0.517226 | 3.1:+46260661 | None:intergenic |
| CGAGCTAAATCATATGATGA+AGG | 0.518042 | 3.1:-46260659 | MS.gene84543:CDS |
| ATCAGTTTCAGTGCAATCAA+AGG | 0.523371 | 3.1:+46260931 | None:intergenic |
| TGGTGGTGATGGGCGTGAAA+TGG | 0.525727 | 3.1:-46261098 | MS.gene84543:CDS |
| AAATTTGCTGATGGTGGTGA+TGG | 0.527499 | 3.1:-46261109 | MS.gene84543:CDS |
| CCATCTCACCATGCGTTGAA+GGG | 0.532489 | 3.1:+46260393 | None:intergenic |
| TGACATAATGGAGTTCTTCA+AGG | 0.535855 | 3.1:-46260570 | MS.gene84543:CDS |
| GATGTGGCCGAGTTCTTCCA+TGG | 0.538399 | 3.1:-46260911 | MS.gene84543:CDS |
| CCCTTCAACGCATGGTGAGA+TGG | 0.538750 | 3.1:-46260393 | MS.gene84543:CDS |
| GCAAAGGATAGAATGACGCT+TGG | 0.544787 | 3.1:-46260437 | MS.gene84543:CDS |
| CGTCATTCTATCCTTTGCCA+TGG | 0.545218 | 3.1:+46260442 | None:intergenic |
| TCAGTTTCAGTGCAATCAAA+GGG | 0.547953 | 3.1:+46260932 | None:intergenic |
| CAAAGGATAGAATGACGCTT+GGG | 0.551160 | 3.1:-46260436 | MS.gene84543:CDS |
| GGTTGGCTGACATATCCATA+TGG | 0.556296 | 3.1:+46260995 | None:intergenic |
| CAAAGAAACAGGCAGAACAT+AGG | 0.560049 | 3.1:-46260788 | MS.gene84543:CDS |
| TTCAGTAAATTTGCTGATGG+TGG | 0.563548 | 3.1:-46261115 | MS.gene84543:CDS |
| CTGACATATCCATATGGAGA+TGG | 0.564910 | 3.1:+46261001 | None:intergenic |
| TGTACATATAACTGGAACCA+GGG | 0.571227 | 3.1:+46261026 | None:intergenic |
| AGAGCAAAGTCAACTTGAAG+AGG | 0.573046 | 3.1:+46260812 | None:intergenic |
| ACAACAGGAAATGGTGGAGG+AGG | 0.573282 | 3.1:+46260971 | None:intergenic |
| TCCACATAAGCCTCCCCAGA+TGG | 0.579302 | 3.1:+46260494 | None:intergenic |
| GTCTAGACCATGGAAGAACT+CGG | 0.581671 | 3.1:+46260904 | None:intergenic |
| GAGCTATTCCCTTCAACGCA+TGG | 0.586026 | 3.1:-46260401 | MS.gene84543:CDS |
| CAAAACACAGAAGCCTTCAC+CGG | 0.588242 | 3.1:+46260841 | None:intergenic |
| TGATGATTCAAAAGCAGCCA+TGG | 0.593984 | 3.1:-46260459 | MS.gene84543:CDS |
| AATTTCAGTAAATTTGCTGA+TGG | 0.594224 | 3.1:-46261118 | MS.gene84543:CDS |
| ACACAGGAGTGTTGCGACTG+AGG | 0.596079 | 3.1:-46260619 | MS.gene84543:CDS |
| TCATCATATGATTTAGCTCG+GGG | 0.596516 | 3.1:+46260662 | None:intergenic |
| TTCAAAAGCAGCCATGGCAA+AGG | 0.597698 | 3.1:-46260453 | MS.gene84543:CDS |
| CGAACAACAGGAAATGGTGG+AGG | 0.604157 | 3.1:+46260968 | None:intergenic |
| GAAATGGTGGAGGAGGAGGT+TGG | 0.608351 | 3.1:+46260978 | None:intergenic |
| ATGGAAGATGCAATTTCAAG+AGG | 0.609038 | 3.1:-46260374 | MS.gene84543:CDS |
| TGATTGCACTGAAACTGATG+TGG | 0.609327 | 3.1:-46260927 | MS.gene84543:CDS |
| AAAGATTCGGCTGAGCACAC+AGG | 0.623512 | 3.1:-46260635 | MS.gene84543:CDS |
| ACGTCAGCGGACAGTTGACG+CGG | 0.625189 | 3.1:-46261068 | MS.gene84543:CDS |
| TCGGGGAGCACTACGACGAG+GGG | 0.629479 | 3.1:+46260679 | None:intergenic |
| AATTTGCTGATGGTGGTGAT+GGG | 0.635503 | 3.1:-46261108 | MS.gene84543:CDS |
| AAGATGCAATTTCAAGAGGA+CGG | 0.635809 | 3.1:-46260370 | MS.gene84543:CDS |
| TTTCCTGTTGTTCGACTGCG+CGG | 0.636494 | 3.1:-46260959 | MS.gene84543:CDS |
| TAAGAGGCAGGAATACTACA+AGG | 0.645116 | 3.1:-46260738 | MS.gene84543:CDS |
| CAAGGAGTATGTGTTGTCGG+AGG | 0.654683 | 3.1:-46260552 | MS.gene84543:CDS |
| CCCCTGAATTCATTACAATG+TGG | 0.658546 | 3.1:+46260522 | None:intergenic |
| CGTCAGCGGACAGTTGACGC+GGG | 0.660169 | 3.1:-46261067 | MS.gene84543:CDS |
| TTGTACATATAACTGGAACC+AGG | 0.660817 | 3.1:+46261025 | None:intergenic |
| CATCAACTATGTCTAGACCA+TGG | 0.660852 | 3.1:+46260894 | None:intergenic |
| CACATTGTAATGAATTCAGG+GGG | 0.663594 | 3.1:-46260521 | MS.gene84543:CDS |
| GCTCGGGGAGCACTACGACG+AGG | 0.665801 | 3.1:+46260677 | None:intergenic |
| AGTCGAACAACAGGAAATGG+TGG | 0.675557 | 3.1:+46260965 | None:intergenic |
| CCACATTGTAATGAATTCAG+GGG | 0.677967 | 3.1:-46260522 | MS.gene84543:CDS |
| ACAGGAGTGTTGCGACTGAG+GGG | 0.684610 | 3.1:-46260617 | MS.gene84543:CDS |
| AATGAGGTTTCAGATGCTCG+AGG | 0.692222 | 3.1:-46260707 | MS.gene84543:CDS |
| AAATGGCTTCAAAACGTCAG+CGG | 0.695070 | 3.1:-46261081 | MS.gene84543:CDS |
| GAGGTTTCAGATGCTCGAGG+CGG | 0.695093 | 3.1:-46260704 | MS.gene84543:CDS |
| GTACATATAACTGGAACCAG+GGG | 0.705619 | 3.1:+46261027 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | ATATGATGAAGGAAAAGATT+CGG | - | chr3.1:46260876-46260895 | MS.gene84543:CDS | 25.0% |
| !! | ATTACCATTTTCTGCTAATA+AGG | - | chr3.1:46260930-46260949 | MS.gene84543:CDS | 25.0% |
| !!! | AAGCTTATTGACTTCAATTT+TGG | - | chr3.1:46260372-46260391 | MS.gene84543:CDS | 25.0% |
| !!! | AATTTCAGTAAATTTGCTGA+TGG | - | chr3.1:46260406-46260425 | MS.gene84543:CDS | 25.0% |
| ATCCACATTGTAATGAATTC+AGG | - | chr3.1:46261000-46261019 | MS.gene84543:CDS | 30.0% | |
| CTTCATCATATGATTTAGCT+CGG | + | chr3.1:46260867-46260886 | None:intergenic | 30.0% | |
| TCATCCTTATTAGCAGAAAA+TGG | + | chr3.1:46260937-46260956 | None:intergenic | 30.0% | |
| TCCACATTGTAATGAATTCA+GGG | - | chr3.1:46261001-46261020 | MS.gene84543:CDS | 30.0% | |
| TGCTAATAAGGATGACATAA+TGG | - | chr3.1:46260942-46260961 | MS.gene84543:CDS | 30.0% | |
| ! | GATGTTCTTTTTGTTCACAA+AGG | - | chr3.1:46260649-46260668 | MS.gene84543:CDS | 30.0% |
| ! | TTCATCATATGATTTAGCTC+GGG | + | chr3.1:46260866-46260885 | None:intergenic | 30.0% |
| ! | TTGAAGTTTTCAGAAGTAAG+AGG | - | chr3.1:46260770-46260789 | MS.gene84543:CDS | 30.0% |
| !! | AGATGGATTGTACATATAAC+TGG | + | chr3.1:46260509-46260528 | None:intergenic | 30.0% |
| AAGATGCAATTTCAAGAGGA+CGG | - | chr3.1:46261154-46261173 | MS.gene84543:CDS | 35.0% | |
| ACTTTGCTCTTCAAAGAAAC+AGG | - | chr3.1:46260725-46260744 | MS.gene84543:CDS | 35.0% | |
| ATCAGTTTCAGTGCAATCAA+AGG | + | chr3.1:46260596-46260615 | None:intergenic | 35.0% | |
| ATGGAAGATGCAATTTCAAG+AGG | - | chr3.1:46261150-46261169 | MS.gene84543:CDS | 35.0% | |
| ATGTACAATCCATCTCCATA+TGG | - | chr3.1:46260514-46260533 | MS.gene84543:CDS | 35.0% | |
| CACATTGTAATGAATTCAGG+GGG | - | chr3.1:46261003-46261022 | MS.gene84543:CDS | 35.0% | |
| CCACATTGTAATGAATTCAG+GGG | - | chr3.1:46261002-46261021 | MS.gene84543:CDS | 35.0% | |
| CGAGCTAAATCATATGATGA+AGG | - | chr3.1:46260865-46260884 | MS.gene84543:CDS | 35.0% | |
| TCAGTTTCAGTGCAATCAAA+GGG | + | chr3.1:46260595-46260614 | None:intergenic | 35.0% | |
| TGTACATATAACTGGAACCA+GGG | + | chr3.1:46260501-46260520 | None:intergenic | 35.0% | |
| TTGTACATATAACTGGAACC+AGG | + | chr3.1:46260502-46260521 | None:intergenic | 35.0% | |
| ! | GTTCTTTTTGTTCACAAAGG+TGG | - | chr3.1:46260652-46260671 | MS.gene84543:CDS | 35.0% |
| ! | TCATCATATGATTTAGCTCG+GGG | + | chr3.1:46260865-46260884 | None:intergenic | 35.0% |
| ! | TGACATAATGGAGTTCTTCA+AGG | - | chr3.1:46260954-46260973 | MS.gene84543:CDS | 35.0% |
| !! | TTCAGTAAATTTGCTGATGG+TGG | - | chr3.1:46260409-46260428 | MS.gene84543:CDS | 35.0% |
| AAATGGCTTCAAAACGTCAG+CGG | - | chr3.1:46260443-46260462 | MS.gene84543:CDS | 40.0% | |
| AGAGCAAAGTCAACTTGAAG+AGG | + | chr3.1:46260715-46260734 | None:intergenic | 40.0% | |
| CAAAGAAACAGGCAGAACAT+AGG | - | chr3.1:46260736-46260755 | MS.gene84543:CDS | 40.0% | |
| CAAAGGATAGAATGACGCTT+GGG | - | chr3.1:46261088-46261107 | MS.gene84543:CDS | 40.0% | |
| CATCAACTATGTCTAGACCA+TGG | + | chr3.1:46260633-46260652 | None:intergenic | 40.0% | |
| CCCCTGAATTCATTACAATG+TGG | + | chr3.1:46261005-46261024 | None:intergenic | 40.0% | |
| CTGACATATCCATATGGAGA+TGG | + | chr3.1:46260526-46260545 | None:intergenic | 40.0% | |
| GTACATATAACTGGAACCAG+GGG | + | chr3.1:46260500-46260519 | None:intergenic | 40.0% | |
| TAAGAGGCAGGAATACTACA+AGG | - | chr3.1:46260786-46260805 | MS.gene84543:CDS | 40.0% | |
| TCTTCATTCTATGATTCCCC+TGG | - | chr3.1:46260481-46260500 | MS.gene84543:CDS | 40.0% | |
| TGATGATTCAAAAGCAGCCA+TGG | - | chr3.1:46261065-46261084 | MS.gene84543:CDS | 40.0% | |
| TGATTGCACTGAAACTGATG+TGG | - | chr3.1:46260597-46260616 | MS.gene84543:CDS | 40.0% | |
| ! | AGTTTTCAGAAGTAAGAGGC+AGG | - | chr3.1:46260774-46260793 | MS.gene84543:CDS | 40.0% |
| ! | CTTCAAGGAGTATGTGTTGT+CGG | - | chr3.1:46260969-46260988 | MS.gene84543:CDS | 40.0% |
| !! | AAATTTGCTGATGGTGGTGA+TGG | - | chr3.1:46260415-46260434 | MS.gene84543:CDS | 40.0% |
| !! | AATTTGCTGATGGTGGTGAT+GGG | - | chr3.1:46260416-46260435 | MS.gene84543:CDS | 40.0% |
| AATGAGGTTTCAGATGCTCG+AGG | - | chr3.1:46260817-46260836 | MS.gene84543:CDS | 45.0% | |
| AGTCGAACAACAGGAAATGG+TGG | + | chr3.1:46260562-46260581 | None:intergenic | 45.0% | |
| CAAAACACAGAAGCCTTCAC+CGG | + | chr3.1:46260686-46260705 | None:intergenic | 45.0% | |
| CGTCATTCTATCCTTTGCCA+TGG | + | chr3.1:46261085-46261104 | None:intergenic | 45.0% | |
| CTACAAGGCAGTTGCAAATG+AGG | - | chr3.1:46260801-46260820 | MS.gene84543:CDS | 45.0% | |
| GCAAAGGATAGAATGACGCT+TGG | - | chr3.1:46261087-46261106 | MS.gene84543:CDS | 45.0% | |
| GTCTAGACCATGGAAGAACT+CGG | + | chr3.1:46260623-46260642 | None:intergenic | 45.0% | |
| TTCAAAAGCAGCCATGGCAA+AGG | - | chr3.1:46261071-46261090 | MS.gene84543:CDS | 45.0% | |
| ! | CACAAAGGTGGCAAGTTTTC+CGG | - | chr3.1:46260664-46260683 | MS.gene84543:CDS | 45.0% |
| ! | GGTGAAGGCTTCTGTGTTTT+GGG | - | chr3.1:46260685-46260704 | MS.gene84543:CDS | 45.0% |
| ! | GGTTGGCTGACATATCCATA+TGG | + | chr3.1:46260532-46260551 | None:intergenic | 45.0% |
| AAAGATTCGGCTGAGCACAC+AGG | - | chr3.1:46260889-46260908 | MS.gene84543:CDS | 50.0% | |
| AATTCAGGGGGAAGACCATC+TGG | - | chr3.1:46261015-46261034 | MS.gene84543:CDS | 50.0% | |
| ATTCAGGGGGAAGACCATCT+GGG | - | chr3.1:46261016-46261035 | MS.gene84543:CDS | 50.0% | |
| CCATCTCACCATGCGTTGAA+GGG | + | chr3.1:46261134-46261153 | None:intergenic | 50.0% | |
| CGAACAACAGGAAATGGTGG+AGG | + | chr3.1:46260559-46260578 | None:intergenic | 50.0% | |
| CGCAGTCGAACAACAGGAAA+TGG | + | chr3.1:46260565-46260584 | None:intergenic | 50.0% | |
| GAGCTATTCCCTTCAACGCA+TGG | - | chr3.1:46261123-46261142 | MS.gene84543:CDS | 50.0% | |
| TCCATCTCACCATGCGTTGA+AGG | + | chr3.1:46261135-46261154 | None:intergenic | 50.0% | |
| TTTCCTGTTGTTCGACTGCG+CGG | - | chr3.1:46260565-46260584 | MS.gene84543:CDS | 50.0% | |
| ! | ACAACAGGAAATGGTGGAGG+AGG | + | chr3.1:46260556-46260575 | None:intergenic | 50.0% |
| ! | CAAGGAGTATGTGTTGTCGG+AGG | - | chr3.1:46260972-46260991 | MS.gene84543:CDS | 50.0% |
| ! | CGGTGAAGGCTTCTGTGTTT+TGG | - | chr3.1:46260684-46260703 | MS.gene84543:CDS | 50.0% |
| ACCATCTGGGGAGGCTTATG+TGG | - | chr3.1:46261029-46261048 | MS.gene84543:CDS | 55.0% | |
| CCCTTCAACGCATGGTGAGA+TGG | - | chr3.1:46261131-46261150 | MS.gene84543:CDS | 55.0% | |
| GAGGTTTCAGATGCTCGAGG+CGG | - | chr3.1:46260820-46260839 | MS.gene84543:CDS | 55.0% | |
| GATGTGGCCGAGTTCTTCCA+TGG | - | chr3.1:46260613-46260632 | MS.gene84543:CDS | 55.0% | |
| TCCACATAAGCCTCCCCAGA+TGG | + | chr3.1:46261033-46261052 | None:intergenic | 55.0% | |
| TTCAGGGGGAAGACCATCTG+GGG | - | chr3.1:46261017-46261036 | MS.gene84543:CDS | 55.0% | |
| ! | ACAGGAAATGGTGGAGGAGG+AGG | + | chr3.1:46260553-46260572 | None:intergenic | 55.0% |
| ! | GAAATGGTGGAGGAGGAGGT+TGG | + | chr3.1:46260549-46260568 | None:intergenic | 55.0% |
| ! | GGTGGCAAGTTTTCCGGTGA+AGG | - | chr3.1:46260670-46260689 | MS.gene84543:CDS | 55.0% |
| !! | ACACAGGAGTGTTGCGACTG+AGG | - | chr3.1:46260905-46260924 | MS.gene84543:CDS | 55.0% |
| !! | ACAGGAGTGTTGCGACTGAG+GGG | - | chr3.1:46260907-46260926 | MS.gene84543:CDS | 55.0% |
| !! | CACAGGAGTGTTGCGACTGA+GGG | - | chr3.1:46260906-46260925 | MS.gene84543:CDS | 55.0% |
| !! | TGGTGGTGATGGGCGTGAAA+TGG | - | chr3.1:46260426-46260445 | MS.gene84543:CDS | 55.0% |
| ACGTCAGCGGACAGTTGACG+CGG | - | chr3.1:46260456-46260475 | MS.gene84543:CDS | 60.0% | |
| AGACCGCGCAGTCGAACAAC+AGG | + | chr3.1:46260571-46260590 | None:intergenic | 60.0% | |
| AGGGGGAAGACCATCTGGGG+AGG | - | chr3.1:46261020-46261039 | MS.gene84543:CDS | 65.0% | |
| CGTCAGCGGACAGTTGACGC+GGG | - | chr3.1:46260457-46260476 | MS.gene84543:CDS | 65.0% | |
| !! | CTCGGGGAGCACTACGACGA+GGG | + | chr3.1:46260849-46260868 | None:intergenic | 65.0% |
| !! | TCGGGGAGCACTACGACGAG+GGG | + | chr3.1:46260848-46260867 | None:intergenic | 65.0% |
| !! | GCTCGGGGAGCACTACGACG+AGG | + | chr3.1:46260850-46260869 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 46260367 | 46261179 | 46260367 | ID=MS.gene84543 |
| chr3.1 | mRNA | 46260367 | 46261179 | 46260367 | ID=MS.gene84543.t1;Parent=MS.gene84543 |
| chr3.1 | exon | 46260367 | 46261179 | 46260367 | ID=MS.gene84543.t1.exon1;Parent=MS.gene84543.t1 |
| chr3.1 | CDS | 46260367 | 46261179 | 46260367 | ID=cds.MS.gene84543.t1;Parent=MS.gene84543.t1 |
| Gene Sequence |
| Protein sequence |
