Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene85016.t1 | XP_013455351.1 | 96 | 202 | 8 | 0 | 1 | 202 | 1 | 202 | 1.00E-101 | 379.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene85016.t1 | Q38841 | 60.0 | 210 | 75 | 3 | 1 | 201 | 1 | 210 | 2.6e-61 | 236.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene85016.t1 | A0A072UIB8 | 96.0 | 202 | 8 | 0 | 1 | 202 | 1 | 202 | 7.5e-102 | 379.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene85016.t1 | TF | MADS-MIKC |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene04932 | MS.gene85016 | 0.821144 | 4.72E-53 | -1.69E-46 |
MS.gene052211 | MS.gene85016 | 0.813696 | 2.25E-51 | -1.69E-46 |
MS.gene05240 | MS.gene85016 | 0.808897 | 2.47E-50 | -1.69E-46 |
MS.gene056688 | MS.gene85016 | 0.802994 | 4.31E-49 | -1.69E-46 |
MS.gene056748 | MS.gene85016 | 0.816546 | 5.23E-52 | -1.69E-46 |
MS.gene056856 | MS.gene85016 | 0.81398 | 1.95E-51 | -1.69E-46 |
MS.gene056920 | MS.gene85016 | 0.811828 | 5.76E-51 | -1.69E-46 |
MS.gene057261 | MS.gene85016 | 0.801227 | 9.95E-49 | -1.69E-46 |
MS.gene057547 | MS.gene85016 | 0.803338 | 3.66E-49 | -1.69E-46 |
MS.gene058603 | MS.gene85016 | 0.820438 | 6.86E-53 | -1.69E-46 |
MS.gene059955 | MS.gene85016 | 0.808119 | 3.62E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene85016.t1 | MTR_4g036050 | 96.040 | 202 | 8 | 0 | 1 | 202 | 1 | 202 | 7.93e-144 | 399 |
MS.gene85016.t1 | MTR_4g036050 | 89.604 | 202 | 7 | 1 | 1 | 202 | 1 | 188 | 9.59e-130 | 362 |
MS.gene85016.t1 | MTR_4g036050 | 89.109 | 202 | 8 | 1 | 1 | 202 | 1 | 188 | 8.23e-129 | 360 |
MS.gene85016.t1 | MTR_4g036050 | 82.673 | 202 | 7 | 1 | 1 | 202 | 1 | 174 | 2.07e-116 | 328 |
MS.gene85016.t1 | MTR_7g075870 | 47.337 | 169 | 88 | 1 | 1 | 169 | 1 | 168 | 2.73e-45 | 149 |
MS.gene85016.t1 | MTR_7g075870 | 47.337 | 169 | 87 | 2 | 1 | 169 | 1 | 167 | 1.25e-43 | 145 |
MS.gene85016.t1 | MTR_8g033220 | 43.860 | 171 | 95 | 1 | 1 | 171 | 1 | 170 | 2.59e-43 | 144 |
MS.gene85016.t1 | MTR_8g033220 | 43.860 | 171 | 95 | 1 | 1 | 171 | 1 | 170 | 3.48e-43 | 144 |
MS.gene85016.t1 | MTR_8g066260 | 42.614 | 176 | 86 | 2 | 1 | 169 | 1 | 168 | 2.88e-41 | 140 |
MS.gene85016.t1 | MTR_3g452380 | 40.201 | 199 | 109 | 5 | 1 | 192 | 16 | 211 | 1.67e-40 | 138 |
MS.gene85016.t1 | MTR_8g097090 | 43.750 | 176 | 97 | 2 | 1 | 175 | 1 | 175 | 5.63e-40 | 137 |
MS.gene85016.t1 | MTR_7g016600 | 44.970 | 169 | 91 | 2 | 1 | 169 | 1 | 167 | 2.46e-39 | 135 |
MS.gene85016.t1 | MTR_7g075850 | 46.471 | 170 | 88 | 2 | 1 | 169 | 1 | 168 | 9.77e-39 | 134 |
MS.gene85016.t1 | MTR_5g046790 | 39.785 | 186 | 97 | 3 | 1 | 179 | 1 | 178 | 6.01e-38 | 130 |
MS.gene85016.t1 | MTR_3g084980 | 42.353 | 170 | 96 | 2 | 1 | 169 | 1 | 169 | 1.45e-37 | 130 |
MS.gene85016.t1 | MTR_6g015975 | 44.379 | 169 | 92 | 2 | 1 | 169 | 1 | 167 | 1.45e-37 | 130 |
MS.gene85016.t1 | MTR_8g033270 | 44.509 | 173 | 88 | 3 | 1 | 170 | 1 | 168 | 2.30e-37 | 130 |
MS.gene85016.t1 | MTR_4g109830 | 40.462 | 173 | 94 | 2 | 1 | 169 | 1 | 168 | 2.62e-37 | 129 |
MS.gene85016.t1 | MTR_5g031000 | 39.623 | 212 | 111 | 5 | 1 | 202 | 1 | 205 | 1.92e-36 | 127 |
MS.gene85016.t1 | MTR_4g102530 | 43.750 | 176 | 83 | 5 | 1 | 169 | 1 | 167 | 2.48e-36 | 126 |
MS.gene85016.t1 | MTR_5g031000 | 39.320 | 206 | 117 | 3 | 1 | 202 | 1 | 202 | 3.33e-36 | 127 |
MS.gene85016.t1 | MTR_2g009890 | 43.182 | 176 | 94 | 3 | 1 | 173 | 1 | 173 | 5.46e-36 | 127 |
MS.gene85016.t1 | MTR_2g017865 | 40.341 | 176 | 101 | 3 | 1 | 175 | 16 | 188 | 5.89e-35 | 124 |
MS.gene85016.t1 | MTR_3g005530 | 40.964 | 166 | 96 | 2 | 1 | 166 | 1 | 164 | 7.35e-35 | 123 |
MS.gene85016.t1 | MTR_4g109810 | 42.012 | 169 | 95 | 1 | 1 | 169 | 1 | 166 | 1.19e-34 | 123 |
MS.gene85016.t1 | MTR_8g087860 | 38.122 | 181 | 110 | 2 | 1 | 181 | 17 | 195 | 3.37e-34 | 122 |
MS.gene85016.t1 | MTR_7g016630 | 38.462 | 169 | 101 | 1 | 1 | 169 | 1 | 166 | 2.28e-33 | 120 |
MS.gene85016.t1 | MTR_1g038300 | 35.961 | 203 | 123 | 3 | 1 | 196 | 1 | 203 | 2.00e-32 | 117 |
MS.gene85016.t1 | MTR_6g464720 | 38.674 | 181 | 101 | 3 | 1 | 176 | 1 | 176 | 2.01e-31 | 115 |
MS.gene85016.t1 | MTR_5g066180 | 42.690 | 171 | 90 | 4 | 1 | 169 | 1 | 165 | 4.46e-31 | 113 |
MS.gene85016.t1 | MTR_3g088615 | 39.189 | 148 | 83 | 2 | 1 | 147 | 1 | 142 | 3.42e-30 | 109 |
MS.gene85016.t1 | MTR_1g053070 | 35.602 | 191 | 115 | 4 | 1 | 185 | 1 | 189 | 1.55e-28 | 107 |
MS.gene85016.t1 | MTR_1g101970 | 37.278 | 169 | 105 | 1 | 1 | 169 | 1 | 168 | 1.67e-28 | 105 |
MS.gene85016.t1 | MTR_5g046870 | 55.056 | 89 | 35 | 1 | 1 | 84 | 1 | 89 | 2.51e-27 | 100 |
MS.gene85016.t1 | MTR_4g093970 | 37.500 | 176 | 104 | 3 | 1 | 173 | 27 | 199 | 4.20e-27 | 103 |
MS.gene85016.t1 | MTR_0003s0590 | 38.286 | 175 | 96 | 4 | 1 | 169 | 1 | 169 | 1.99e-26 | 102 |
MS.gene85016.t1 | MTR_1g029670 | 37.838 | 148 | 85 | 2 | 1 | 147 | 1 | 142 | 3.70e-26 | 99.4 |
MS.gene85016.t1 | MTR_3g113030 | 34.483 | 174 | 106 | 4 | 1 | 172 | 1 | 168 | 1.07e-25 | 99.8 |
MS.gene85016.t1 | MTR_5g032520 | 39.181 | 171 | 98 | 3 | 1 | 169 | 1 | 167 | 4.10e-25 | 97.8 |
MS.gene85016.t1 | MTR_5g032150 | 38.596 | 171 | 99 | 3 | 1 | 169 | 1 | 167 | 1.04e-23 | 94.4 |
MS.gene85016.t1 | MTR_5g021270 | 32.941 | 170 | 105 | 4 | 1 | 166 | 1 | 165 | 4.74e-23 | 92.8 |
MS.gene85016.t1 | MTR_5g021270 | 32.941 | 170 | 105 | 4 | 1 | 166 | 1 | 165 | 5.10e-23 | 92.8 |
MS.gene85016.t1 | MTR_2g461710 | 66.102 | 59 | 20 | 0 | 1 | 59 | 1 | 59 | 6.35e-23 | 87.4 |
MS.gene85016.t1 | MTR_5g066960 | 66.102 | 59 | 20 | 0 | 1 | 59 | 1 | 59 | 4.02e-22 | 85.5 |
MS.gene85016.t1 | MTR_4g093030 | 50.575 | 87 | 28 | 1 | 1 | 72 | 1 | 87 | 3.18e-21 | 86.3 |
MS.gene85016.t1 | MTR_1g041615 | 42.268 | 97 | 53 | 1 | 16 | 109 | 20 | 116 | 6.92e-18 | 76.6 |
MS.gene85016.t1 | MTR_3g102570 | 46.575 | 73 | 39 | 0 | 1 | 73 | 1 | 73 | 2.66e-17 | 78.6 |
MS.gene85016.t1 | MTR_4g084740 | 42.169 | 83 | 48 | 0 | 1 | 83 | 1 | 83 | 3.31e-17 | 78.6 |
MS.gene85016.t1 | MTR_2g093190 | 27.189 | 217 | 126 | 6 | 2 | 202 | 9 | 209 | 3.00e-15 | 72.0 |
MS.gene85016.t1 | MTR_8g051580 | 56.364 | 55 | 24 | 0 | 1 | 55 | 1 | 55 | 6.75e-15 | 70.1 |
MS.gene85016.t1 | MTR_8g079502 | 41.667 | 84 | 46 | 2 | 1 | 84 | 1 | 81 | 1.94e-14 | 68.6 |
MS.gene85016.t1 | MTR_1g063160 | 39.796 | 98 | 54 | 3 | 1 | 98 | 1 | 93 | 2.08e-14 | 68.6 |
MS.gene85016.t1 | MTR_4g131030 | 32.584 | 178 | 97 | 7 | 1 | 173 | 1 | 160 | 3.12e-14 | 68.9 |
MS.gene85016.t1 | MTR_1g047550 | 44.444 | 72 | 39 | 1 | 1 | 72 | 1 | 71 | 9.89e-14 | 66.6 |
MS.gene85016.t1 | MTR_1g054265 | 43.836 | 73 | 40 | 1 | 1 | 73 | 1 | 72 | 2.81e-13 | 65.5 |
MS.gene85016.t1 | MTR_2g105290 | 31.818 | 110 | 74 | 1 | 1 | 110 | 11 | 119 | 3.37e-13 | 65.5 |
MS.gene85016.t1 | MTR_4g094632 | 33.333 | 111 | 71 | 3 | 1 | 109 | 1 | 110 | 6.87e-13 | 63.9 |
MS.gene85016.t1 | MTR_1g108510 | 28.649 | 185 | 109 | 6 | 2 | 170 | 9 | 186 | 9.10e-13 | 65.1 |
MS.gene85016.t1 | MTR_3g030770 | 41.429 | 70 | 40 | 1 | 2 | 71 | 9 | 77 | 1.15e-12 | 64.7 |
MS.gene85016.t1 | MTR_4g094638 | 40.845 | 71 | 41 | 1 | 1 | 71 | 1 | 70 | 1.29e-12 | 63.9 |
MS.gene85016.t1 | MTR_5g045560 | 28.477 | 151 | 91 | 4 | 1 | 135 | 8 | 157 | 1.41e-12 | 64.7 |
MS.gene85016.t1 | MTR_2g030740 | 28.378 | 148 | 89 | 4 | 3 | 134 | 10 | 156 | 1.53e-12 | 64.7 |
MS.gene85016.t1 | MTR_4g108720 | 41.333 | 75 | 43 | 1 | 1 | 74 | 1 | 75 | 2.79e-12 | 64.7 |
MS.gene85016.t1 | MTR_8g086290 | 38.356 | 73 | 44 | 1 | 2 | 74 | 12 | 83 | 3.79e-12 | 62.4 |
MS.gene85016.t1 | MTR_3g052920 | 40.000 | 70 | 41 | 1 | 2 | 71 | 9 | 77 | 4.12e-12 | 63.2 |
MS.gene85016.t1 | MTR_1g106070 | 40.000 | 70 | 41 | 1 | 2 | 71 | 9 | 77 | 4.41e-12 | 62.4 |
MS.gene85016.t1 | MTR_8g043650 | 28.188 | 149 | 90 | 4 | 2 | 134 | 9 | 156 | 6.75e-12 | 62.8 |
MS.gene85016.t1 | MTR_1g105910 | 40.000 | 70 | 41 | 1 | 2 | 71 | 9 | 77 | 7.77e-12 | 62.8 |
MS.gene85016.t1 | MTR_1g108580 | 26.267 | 217 | 128 | 8 | 2 | 202 | 9 | 209 | 8.92e-12 | 62.4 |
MS.gene85016.t1 | MTR_7g028448 | 29.545 | 132 | 89 | 3 | 16 | 147 | 26 | 153 | 1.13e-11 | 60.8 |
MS.gene85016.t1 | MTR_4g036915 | 29.545 | 132 | 89 | 3 | 16 | 147 | 26 | 153 | 1.13e-11 | 60.8 |
MS.gene85016.t1 | MTR_2g085250 | 41.429 | 70 | 40 | 1 | 2 | 71 | 9 | 77 | 1.18e-11 | 62.0 |
MS.gene85016.t1 | MTR_2g085280 | 41.429 | 70 | 40 | 1 | 2 | 71 | 9 | 77 | 1.19e-11 | 62.0 |
MS.gene85016.t1 | MTR_3g080940 | 40.845 | 71 | 41 | 1 | 1 | 71 | 8 | 77 | 1.29e-11 | 61.6 |
MS.gene85016.t1 | MTR_8g046350 | 40.278 | 72 | 42 | 1 | 1 | 72 | 1 | 71 | 1.53e-11 | 60.5 |
MS.gene85016.t1 | MTR_1g012570 | 29.412 | 153 | 83 | 4 | 2 | 134 | 9 | 156 | 1.64e-11 | 61.6 |
MS.gene85016.t1 | MTR_3g052870 | 40.000 | 70 | 41 | 1 | 2 | 71 | 9 | 77 | 1.64e-11 | 61.6 |
MS.gene85016.t1 | MTR_1g077360 | 40.000 | 70 | 41 | 1 | 2 | 71 | 9 | 77 | 1.71e-11 | 61.6 |
MS.gene85016.t1 | MTR_1g105920 | 40.000 | 70 | 41 | 1 | 2 | 71 | 9 | 77 | 2.30e-11 | 61.2 |
MS.gene85016.t1 | MTR_5g053390 | 28.667 | 150 | 90 | 4 | 2 | 135 | 9 | 157 | 2.33e-11 | 61.2 |
MS.gene85016.t1 | MTR_8g033250 | 29.167 | 144 | 92 | 2 | 67 | 200 | 8 | 151 | 2.55e-11 | 60.1 |
MS.gene85016.t1 | MTR_5g041650 | 42.105 | 76 | 41 | 2 | 1 | 74 | 38 | 112 | 2.88e-11 | 62.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene85016.t1 | AT1G71692 | 59.716 | 211 | 76 | 3 | 1 | 202 | 1 | 211 | 6.35e-77 | 230 |
MS.gene85016.t1 | AT2G45660 | 44.828 | 174 | 88 | 4 | 1 | 171 | 1 | 169 | 3.23e-41 | 139 |
MS.gene85016.t1 | AT3G58780 | 43.750 | 176 | 95 | 3 | 1 | 175 | 16 | 188 | 1.06e-40 | 139 |
MS.gene85016.t1 | AT2G42830 | 43.258 | 178 | 97 | 3 | 1 | 177 | 16 | 190 | 1.12e-40 | 139 |
MS.gene85016.t1 | AT3G58780 | 43.750 | 176 | 95 | 3 | 1 | 175 | 22 | 194 | 1.35e-40 | 139 |
MS.gene85016.t1 | AT1G69120 | 39.665 | 179 | 107 | 1 | 1 | 179 | 1 | 178 | 4.93e-40 | 136 |
MS.gene85016.t1 | AT1G24260 | 43.023 | 172 | 95 | 2 | 1 | 170 | 1 | 171 | 8.27e-40 | 136 |
MS.gene85016.t1 | AT1G69120 | 39.665 | 179 | 107 | 1 | 1 | 179 | 1 | 178 | 1.29e-39 | 136 |
MS.gene85016.t1 | AT2G42830 | 43.889 | 180 | 95 | 4 | 1 | 177 | 16 | 192 | 2.11e-39 | 135 |
MS.gene85016.t1 | AT1G24260 | 42.775 | 173 | 95 | 2 | 1 | 170 | 1 | 172 | 2.18e-39 | 135 |
MS.gene85016.t1 | AT2G45660 | 45.342 | 161 | 80 | 4 | 1 | 158 | 1 | 156 | 3.04e-39 | 132 |
MS.gene85016.t1 | AT4G09960 | 42.045 | 176 | 98 | 3 | 1 | 175 | 2 | 174 | 4.34e-38 | 131 |
MS.gene85016.t1 | AT4G09960 | 42.045 | 176 | 98 | 3 | 1 | 175 | 1 | 173 | 4.56e-38 | 131 |
MS.gene85016.t1 | AT4G09960 | 42.045 | 176 | 98 | 3 | 1 | 175 | 11 | 183 | 5.03e-38 | 132 |
MS.gene85016.t1 | AT1G26310 | 37.158 | 183 | 108 | 2 | 1 | 179 | 1 | 180 | 8.28e-38 | 131 |
MS.gene85016.t1 | AT4G09960 | 42.045 | 176 | 98 | 3 | 1 | 175 | 27 | 199 | 1.24e-37 | 131 |
MS.gene85016.t1 | AT1G24260 | 42.857 | 161 | 88 | 2 | 1 | 158 | 1 | 160 | 3.40e-37 | 129 |
MS.gene85016.t1 | AT2G45650 | 43.931 | 173 | 86 | 3 | 1 | 169 | 1 | 166 | 4.19e-37 | 129 |
MS.gene85016.t1 | AT3G58780 | 42.045 | 176 | 91 | 3 | 1 | 175 | 16 | 181 | 5.86e-37 | 129 |
MS.gene85016.t1 | AT4G18960 | 40.909 | 176 | 100 | 3 | 2 | 176 | 18 | 190 | 7.24e-37 | 129 |
MS.gene85016.t1 | AT5G60910 | 40.698 | 172 | 95 | 2 | 1 | 169 | 1 | 168 | 8.20e-37 | 129 |
MS.gene85016.t1 | AT3G58780 | 38.500 | 200 | 96 | 3 | 1 | 175 | 16 | 213 | 1.37e-36 | 129 |
MS.gene85016.t1 | AT3G58780 | 47.260 | 146 | 73 | 3 | 1 | 145 | 16 | 158 | 2.13e-36 | 129 |
MS.gene85016.t1 | AT4G09960 | 40.805 | 174 | 99 | 3 | 1 | 173 | 1 | 171 | 2.21e-36 | 127 |
MS.gene85016.t1 | AT3G02310 | 43.195 | 169 | 95 | 1 | 1 | 169 | 1 | 168 | 5.98e-36 | 125 |
MS.gene85016.t1 | AT5G15800 | 43.195 | 169 | 95 | 1 | 1 | 169 | 1 | 168 | 6.56e-36 | 126 |
MS.gene85016.t1 | AT5G15800 | 43.195 | 169 | 95 | 1 | 1 | 169 | 1 | 168 | 9.74e-36 | 126 |
MS.gene85016.t1 | AT2G03710 | 43.529 | 170 | 93 | 3 | 1 | 169 | 1 | 168 | 2.18e-35 | 123 |
MS.gene85016.t1 | AT4G22950 | 40.571 | 175 | 97 | 3 | 1 | 173 | 1 | 170 | 2.69e-35 | 122 |
MS.gene85016.t1 | AT4G37940 | 40.116 | 172 | 88 | 3 | 1 | 166 | 1 | 163 | 3.87e-35 | 124 |
MS.gene85016.t1 | AT3G02310 | 43.195 | 169 | 95 | 1 | 1 | 169 | 1 | 168 | 3.87e-35 | 124 |
MS.gene85016.t1 | AT5G62165 | 38.824 | 170 | 102 | 2 | 1 | 170 | 1 | 168 | 7.19e-35 | 122 |
MS.gene85016.t1 | AT5G62165 | 38.824 | 170 | 102 | 2 | 1 | 170 | 1 | 168 | 7.19e-35 | 122 |
MS.gene85016.t1 | AT5G62165 | 38.824 | 170 | 102 | 2 | 1 | 170 | 1 | 168 | 7.19e-35 | 122 |
MS.gene85016.t1 | AT5G13790 | 37.441 | 211 | 117 | 5 | 1 | 202 | 1 | 205 | 1.56e-34 | 123 |
MS.gene85016.t1 | AT4G11880 | 42.138 | 159 | 88 | 2 | 1 | 158 | 1 | 156 | 1.84e-34 | 120 |
MS.gene85016.t1 | AT4G11880 | 42.138 | 159 | 88 | 2 | 1 | 158 | 1 | 156 | 1.84e-34 | 120 |
MS.gene85016.t1 | AT2G03710 | 43.529 | 170 | 93 | 3 | 1 | 169 | 1 | 168 | 1.95e-34 | 123 |
MS.gene85016.t1 | AT2G03710 | 43.529 | 170 | 93 | 3 | 1 | 169 | 1 | 168 | 2.19e-34 | 122 |
MS.gene85016.t1 | AT4G09960 | 41.111 | 180 | 98 | 4 | 1 | 175 | 96 | 272 | 2.42e-34 | 124 |
MS.gene85016.t1 | AT4G22950 | 40.110 | 182 | 102 | 3 | 1 | 180 | 1 | 177 | 2.90e-34 | 121 |
MS.gene85016.t1 | AT4G22950 | 40.110 | 182 | 102 | 3 | 1 | 180 | 1 | 177 | 2.90e-34 | 121 |
MS.gene85016.t1 | AT5G62165 | 38.608 | 158 | 95 | 2 | 1 | 158 | 1 | 156 | 1.44e-33 | 117 |
MS.gene85016.t1 | AT5G62165 | 38.608 | 158 | 95 | 2 | 1 | 158 | 1 | 156 | 1.44e-33 | 117 |
MS.gene85016.t1 | AT5G62165 | 38.608 | 158 | 95 | 2 | 1 | 158 | 1 | 156 | 1.44e-33 | 117 |
MS.gene85016.t1 | AT3G57230 | 40.854 | 164 | 89 | 4 | 1 | 162 | 1 | 158 | 1.72e-33 | 120 |
MS.gene85016.t1 | AT3G57230 | 40.854 | 164 | 89 | 4 | 1 | 162 | 1 | 158 | 1.72e-33 | 120 |
MS.gene85016.t1 | AT3G61120 | 42.045 | 176 | 84 | 3 | 1 | 169 | 1 | 165 | 2.04e-33 | 120 |
MS.gene85016.t1 | AT4G37940 | 41.401 | 157 | 77 | 3 | 1 | 151 | 1 | 148 | 2.65e-33 | 119 |
MS.gene85016.t1 | AT5G13790 | 36.019 | 211 | 117 | 4 | 1 | 202 | 1 | 202 | 4.02e-33 | 120 |
MS.gene85016.t1 | AT5G62165 | 40.541 | 148 | 86 | 2 | 1 | 148 | 1 | 146 | 5.55e-33 | 116 |
MS.gene85016.t1 | AT5G62165 | 40.541 | 148 | 86 | 2 | 1 | 148 | 1 | 146 | 5.55e-33 | 116 |
MS.gene85016.t1 | AT5G62165 | 40.541 | 148 | 86 | 2 | 1 | 148 | 1 | 146 | 5.55e-33 | 116 |
MS.gene85016.t1 | AT5G62165 | 40.541 | 148 | 86 | 2 | 1 | 148 | 1 | 146 | 5.55e-33 | 116 |
MS.gene85016.t1 | AT5G62165 | 40.541 | 148 | 86 | 2 | 1 | 148 | 1 | 146 | 5.55e-33 | 116 |
MS.gene85016.t1 | AT5G23260 | 36.842 | 190 | 115 | 2 | 1 | 189 | 1 | 186 | 1.42e-32 | 118 |
MS.gene85016.t1 | AT5G23260 | 36.946 | 203 | 122 | 3 | 1 | 202 | 17 | 214 | 2.59e-32 | 117 |
MS.gene85016.t1 | AT3G30260 | 40.789 | 152 | 89 | 1 | 1 | 152 | 1 | 151 | 2.63e-32 | 117 |
MS.gene85016.t1 | AT4G11880 | 41.520 | 171 | 94 | 2 | 1 | 169 | 1 | 167 | 3.04e-32 | 116 |
MS.gene85016.t1 | AT4G11880 | 41.520 | 171 | 94 | 2 | 1 | 169 | 1 | 167 | 3.04e-32 | 116 |
MS.gene85016.t1 | AT5G51870 | 36.686 | 169 | 106 | 1 | 1 | 169 | 1 | 168 | 5.15e-32 | 115 |
MS.gene85016.t1 | AT5G51870 | 36.686 | 169 | 106 | 1 | 1 | 169 | 1 | 168 | 8.54e-32 | 115 |
MS.gene85016.t1 | AT5G51870 | 36.686 | 169 | 106 | 1 | 1 | 169 | 11 | 178 | 1.22e-31 | 115 |
MS.gene85016.t1 | AT2G14210 | 40.000 | 180 | 92 | 2 | 1 | 173 | 1 | 171 | 1.33e-31 | 115 |
MS.gene85016.t1 | AT2G14210 | 41.341 | 179 | 91 | 2 | 1 | 173 | 1 | 171 | 1.56e-31 | 115 |
MS.gene85016.t1 | AT4G37940 | 40.645 | 155 | 77 | 3 | 1 | 149 | 1 | 146 | 1.92e-31 | 113 |
MS.gene85016.t1 | AT3G57230 | 40.816 | 147 | 80 | 3 | 1 | 145 | 1 | 142 | 4.50e-31 | 111 |
MS.gene85016.t1 | AT5G62165 | 40.972 | 144 | 83 | 2 | 1 | 144 | 1 | 142 | 5.73e-31 | 112 |
MS.gene85016.t1 | AT5G62165 | 40.972 | 144 | 83 | 2 | 1 | 144 | 1 | 142 | 5.73e-31 | 112 |
MS.gene85016.t1 | AT5G51870 | 37.838 | 148 | 91 | 1 | 1 | 148 | 1 | 147 | 5.31e-30 | 109 |
MS.gene85016.t1 | AT5G51870 | 37.838 | 148 | 91 | 1 | 1 | 148 | 24 | 170 | 1.38e-29 | 108 |
MS.gene85016.t1 | AT5G51860 | 37.952 | 166 | 96 | 3 | 1 | 163 | 1 | 162 | 1.77e-29 | 108 |
MS.gene85016.t1 | AT5G51860 | 37.952 | 166 | 96 | 3 | 1 | 163 | 1 | 162 | 1.80e-29 | 108 |
MS.gene85016.t1 | AT5G23260 | 36.453 | 203 | 118 | 4 | 1 | 202 | 17 | 209 | 2.26e-29 | 110 |
MS.gene85016.t1 | AT2G22630 | 37.209 | 172 | 93 | 3 | 1 | 166 | 1 | 163 | 1.25e-28 | 107 |
MS.gene85016.t1 | AT2G22630 | 37.209 | 172 | 93 | 3 | 1 | 166 | 1 | 163 | 1.25e-28 | 107 |
MS.gene85016.t1 | AT5G23260 | 39.474 | 152 | 87 | 2 | 1 | 151 | 1 | 148 | 2.91e-28 | 106 |
MS.gene85016.t1 | AT3G57390 | 35.754 | 179 | 108 | 2 | 1 | 173 | 1 | 178 | 5.27e-27 | 102 |
MS.gene85016.t1 | AT3G57390 | 35.754 | 179 | 108 | 2 | 1 | 173 | 1 | 178 | 8.94e-27 | 103 |
MS.gene85016.t1 | AT5G62165 | 58.667 | 75 | 30 | 1 | 1 | 75 | 1 | 74 | 1.31e-25 | 95.9 |
MS.gene85016.t1 | AT4G24540 | 36.620 | 213 | 106 | 7 | 1 | 193 | 1 | 204 | 1.93e-25 | 98.6 |
MS.gene85016.t1 | AT2G22540 | 38.728 | 173 | 96 | 4 | 1 | 169 | 1 | 167 | 3.75e-25 | 98.6 |
MS.gene85016.t1 | AT2G22540 | 38.728 | 173 | 96 | 4 | 1 | 169 | 1 | 167 | 3.75e-25 | 98.6 |
MS.gene85016.t1 | AT5G20240 | 36.242 | 149 | 88 | 2 | 1 | 148 | 1 | 143 | 1.05e-24 | 96.7 |
MS.gene85016.t1 | AT5G20240 | 35.811 | 148 | 88 | 2 | 1 | 147 | 1 | 142 | 2.71e-24 | 94.0 |
MS.gene85016.t1 | AT2G22540 | 39.645 | 169 | 95 | 3 | 1 | 169 | 1 | 162 | 6.98e-24 | 95.1 |
MS.gene85016.t1 | AT1G31140 | 36.913 | 149 | 93 | 1 | 1 | 148 | 1 | 149 | 1.40e-23 | 93.6 |
MS.gene85016.t1 | AT5G65050 | 33.721 | 172 | 99 | 4 | 1 | 169 | 1 | 160 | 4.38e-23 | 91.7 |
MS.gene85016.t1 | AT5G65060 | 30.769 | 195 | 118 | 5 | 1 | 193 | 1 | 180 | 7.84e-23 | 91.3 |
MS.gene85016.t1 | AT1G31140 | 38.000 | 150 | 88 | 3 | 1 | 148 | 1 | 147 | 7.85e-23 | 91.7 |
MS.gene85016.t1 | AT5G65070 | 33.140 | 172 | 100 | 5 | 1 | 169 | 1 | 160 | 1.02e-22 | 91.3 |
MS.gene85016.t1 | AT3G54340 | 35.359 | 181 | 99 | 6 | 1 | 174 | 1 | 170 | 1.02e-22 | 92.0 |
MS.gene85016.t1 | AT5G65050 | 33.523 | 176 | 102 | 4 | 1 | 173 | 1 | 164 | 1.92e-22 | 90.1 |
MS.gene85016.t1 | AT5G65080 | 31.288 | 163 | 103 | 3 | 1 | 163 | 8 | 161 | 2.01e-22 | 90.1 |
MS.gene85016.t1 | AT5G65060 | 32.164 | 171 | 103 | 4 | 1 | 169 | 1 | 160 | 7.53e-22 | 88.6 |
MS.gene85016.t1 | AT5G10140 | 31.737 | 167 | 87 | 3 | 1 | 158 | 1 | 149 | 1.63e-21 | 87.4 |
MS.gene85016.t1 | AT5G65050 | 32.955 | 176 | 92 | 4 | 1 | 173 | 1 | 153 | 3.07e-21 | 87.0 |
MS.gene85016.t1 | AT5G65070 | 31.122 | 196 | 103 | 5 | 1 | 169 | 1 | 191 | 4.44e-21 | 87.4 |
MS.gene85016.t1 | AT5G65070 | 48.571 | 70 | 36 | 0 | 1 | 70 | 1 | 70 | 7.74e-21 | 84.7 |
MS.gene85016.t1 | AT5G10140 | 32.484 | 157 | 79 | 3 | 1 | 148 | 1 | 139 | 1.21e-20 | 84.7 |
MS.gene85016.t1 | AT5G65050 | 33.742 | 163 | 93 | 4 | 1 | 160 | 1 | 151 | 1.30e-20 | 85.1 |
MS.gene85016.t1 | AT5G65060 | 31.844 | 179 | 98 | 3 | 1 | 177 | 1 | 157 | 1.50e-20 | 85.1 |
MS.gene85016.t1 | AT5G10140 | 32.484 | 157 | 79 | 3 | 1 | 148 | 1 | 139 | 1.70e-20 | 85.1 |
MS.gene85016.t1 | AT5G10140 | 32.484 | 157 | 79 | 3 | 1 | 148 | 1 | 139 | 2.56e-20 | 84.7 |
MS.gene85016.t1 | AT5G65070 | 48.571 | 70 | 36 | 0 | 1 | 70 | 1 | 70 | 4.35e-20 | 84.3 |
MS.gene85016.t1 | AT1G77080 | 32.941 | 170 | 103 | 3 | 1 | 169 | 1 | 160 | 5.77e-19 | 80.5 |
MS.gene85016.t1 | AT1G77080 | 32.584 | 178 | 109 | 3 | 1 | 177 | 1 | 168 | 6.12e-19 | 81.3 |
MS.gene85016.t1 | AT5G65070 | 31.282 | 195 | 105 | 6 | 1 | 169 | 1 | 192 | 6.21e-19 | 82.0 |
MS.gene85016.t1 | AT1G77080 | 32.941 | 170 | 103 | 3 | 1 | 169 | 1 | 160 | 1.13e-18 | 79.7 |
MS.gene85016.t1 | AT1G77080 | 29.208 | 202 | 111 | 4 | 1 | 177 | 1 | 195 | 3.81e-17 | 77.0 |
MS.gene85016.t1 | AT1G77080 | 31.319 | 182 | 102 | 4 | 1 | 177 | 1 | 164 | 2.07e-16 | 74.3 |
MS.gene85016.t1 | AT5G65080 | 52.542 | 59 | 28 | 0 | 1 | 59 | 8 | 66 | 4.87e-16 | 73.6 |
MS.gene85016.t1 | AT1G22130 | 25.714 | 210 | 119 | 2 | 1 | 173 | 1 | 210 | 5.05e-16 | 75.5 |
MS.gene85016.t1 | AT1G77980 | 44.595 | 74 | 41 | 0 | 1 | 74 | 1 | 74 | 5.09e-16 | 75.5 |
MS.gene85016.t1 | AT4G37435 | 33.333 | 141 | 87 | 2 | 1 | 137 | 1 | 138 | 2.64e-15 | 71.2 |
MS.gene85016.t1 | AT1G72350 | 47.887 | 71 | 34 | 1 | 2 | 72 | 43 | 110 | 1.36e-14 | 70.1 |
MS.gene85016.t1 | AT1G77950 | 23.318 | 223 | 123 | 3 | 1 | 184 | 1 | 214 | 1.49e-14 | 70.5 |
MS.gene85016.t1 | AT1G77950 | 23.318 | 223 | 123 | 3 | 1 | 184 | 1 | 214 | 1.49e-14 | 70.5 |
MS.gene85016.t1 | AT1G77950 | 23.318 | 223 | 123 | 3 | 1 | 184 | 1 | 214 | 1.49e-14 | 70.5 |
MS.gene85016.t1 | AT1G77950 | 23.318 | 223 | 123 | 3 | 1 | 184 | 1 | 214 | 1.49e-14 | 70.5 |
MS.gene85016.t1 | AT2G34440 | 34.259 | 108 | 67 | 2 | 1 | 105 | 1 | 107 | 2.62e-14 | 68.2 |
MS.gene85016.t1 | AT1G77080 | 32.298 | 161 | 90 | 5 | 1 | 158 | 1 | 145 | 3.09e-14 | 67.4 |
MS.gene85016.t1 | AT2G24840 | 42.254 | 71 | 40 | 1 | 1 | 71 | 62 | 131 | 3.02e-13 | 67.0 |
MS.gene85016.t1 | AT2G03060 | 44.000 | 75 | 41 | 1 | 1 | 74 | 1 | 75 | 1.21e-12 | 65.9 |
MS.gene85016.t1 | AT2G03060 | 44.000 | 75 | 41 | 1 | 1 | 74 | 1 | 75 | 1.21e-12 | 65.9 |
MS.gene85016.t1 | AT2G03060 | 44.000 | 75 | 41 | 1 | 1 | 74 | 1 | 75 | 1.21e-12 | 65.9 |
MS.gene85016.t1 | AT1G01530 | 48.276 | 58 | 30 | 0 | 1 | 58 | 6 | 63 | 1.24e-12 | 65.1 |
MS.gene85016.t1 | AT2G03060 | 44.000 | 75 | 41 | 1 | 1 | 74 | 1 | 75 | 1.30e-12 | 65.9 |
MS.gene85016.t1 | AT3G66656 | 46.552 | 58 | 31 | 0 | 1 | 58 | 1 | 58 | 1.82e-12 | 63.5 |
MS.gene85016.t1 | AT4G36590 | 30.539 | 167 | 93 | 6 | 2 | 157 | 7 | 161 | 2.50e-12 | 64.3 |
MS.gene85016.t1 | AT1G18750 | 41.333 | 75 | 43 | 1 | 1 | 74 | 1 | 75 | 5.38e-12 | 64.3 |
MS.gene85016.t1 | AT1G18750 | 41.333 | 75 | 43 | 1 | 1 | 74 | 1 | 75 | 5.59e-12 | 64.3 |
MS.gene85016.t1 | AT1G18750 | 41.333 | 75 | 43 | 1 | 1 | 74 | 1 | 75 | 5.75e-12 | 63.9 |
MS.gene85016.t1 | AT1G69540 | 39.189 | 74 | 45 | 0 | 1 | 74 | 1 | 74 | 1.59e-11 | 62.8 |
MS.gene85016.t1 | AT1G69540 | 39.189 | 74 | 45 | 0 | 1 | 74 | 1 | 74 | 2.13e-11 | 62.4 |
Find 50 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TATTTGTTTGGAGGAGGATT+AGG | 0.243362 | 4.2:+68280489 | MS.gene85016:CDS |
CGTGCTTCAGTGACAGCTTC+AGG | 0.306266 | 4.2:-68277644 | None:intergenic |
GTGCTTTGCGATGCTGAAAT+TGG | 0.317759 | 4.2:+68277020 | MS.gene85016:CDS |
TTGAAAAGAACCTCGAAAAC+TGG | 0.326345 | 4.2:+68280541 | MS.gene85016:CDS |
ATTTGTTTGGAGGAGGATTA+GGG | 0.367328 | 4.2:+68280490 | MS.gene85016:CDS |
AAATAAGTATCTCCATGATT+TGG | 0.377590 | 4.2:+68285649 | MS.gene85016:CDS |
ATTATTGGCAGGTATTTGTT+TGG | 0.401347 | 4.2:+68280477 | MS.gene85016:intron |
TGAAGCACGTCCTCTTGTTT+CGG | 0.410298 | 4.2:+68277658 | MS.gene85016:CDS |
TGGAGGAGGATTAGGGACTA+TGG | 0.415641 | 4.2:+68280497 | MS.gene85016:CDS |
AATCCAAGCTTTGAGGGATA+AGG | 0.421397 | 4.2:+68280724 | MS.gene85016:CDS |
ATTTAAGGAGGGAACACTTA+AGG | 0.425708 | 4.2:+68285622 | MS.gene85016:intron |
GGCAGGTATTTGTTTGGAGG+AGG | 0.434879 | 4.2:+68280483 | MS.gene85016:intron |
TTCCCACTAATTATACAAGA+TGG | 0.434963 | 4.2:+68285834 | MS.gene85016:CDS |
AAAGTCACTTGCCTGTGCAC+TGG | 0.436750 | 4.2:-68276951 | None:intergenic |
AGAGATCGATACCTTGCAAA+AGG | 0.454575 | 4.2:+68279499 | MS.gene85016:CDS |
ATCCCATCTTGTATAATTAG+TGG | 0.454812 | 4.2:-68285837 | None:intergenic |
CCGAGCGGGGCTTCTGAAGA+AGG | 0.465308 | 4.2:+68276983 | MS.gene85016:CDS |
AAGTCACTTGCCTGTGCACT+GGG | 0.471642 | 4.2:-68276950 | None:intergenic |
ATGAATATATTACCAAATCA+TGG | 0.474738 | 4.2:-68285661 | None:intergenic |
ACTTTCTGTAAGCGCCGAGC+GGG | 0.485647 | 4.2:+68276969 | MS.gene85016:CDS |
ATTGGCAGGTATTTGTTTGG+AGG | 0.487880 | 4.2:+68280480 | MS.gene85016:intron |
CTCTATGAACTCGCCACCAA+AGG | 0.491747 | 4.2:+68277071 | MS.gene85016:CDS |
CTTCTCTATTAGCCCTTGCA+TGG | 0.492434 | 4.2:-68277594 | None:intergenic |
TAACCTTATCCCTCAAAGCT+TGG | 0.494227 | 4.2:-68280727 | None:intergenic |
CACAAGAAATCCAAGCTTTG+AGG | 0.501811 | 4.2:+68280717 | MS.gene85016:CDS |
AACGAAGTATCAGTAGCAAA+TGG | 0.506323 | 4.2:-68285813 | None:intergenic |
TCCCACTAATTATACAAGAT+GGG | 0.527346 | 4.2:+68285835 | MS.gene85016:CDS |
CCTTCTTCAGAAGCCCCGCT+CGG | 0.527878 | 4.2:-68276983 | None:intergenic |
TTCATAGAGCTTTCCATGAG+CGG | 0.532053 | 4.2:-68277057 | None:intergenic |
ACAAGAAATCCAAGCTTTGA+GGG | 0.536329 | 4.2:+68280718 | MS.gene85016:CDS |
ATGAAATGAAGAACCATGCA+AGG | 0.539615 | 4.2:+68277581 | MS.gene85016:intron |
ATACCTTGCAAAAGGGTCTC+CGG | 0.540964 | 4.2:+68279507 | MS.gene85016:CDS |
GTATAATGTTCGCTCAATGA+AGG | 0.550286 | 4.2:+68280566 | MS.gene85016:CDS |
TCTATGAACTCGCCACCAAA+GGG | 0.554348 | 4.2:+68277072 | MS.gene85016:CDS |
TCCCATCTTGTATAATTAGT+GGG | 0.555246 | 4.2:-68285836 | None:intergenic |
AATCGACATGGCTCGAGGGA+AGG | 0.556037 | 4.2:+68276905 | None:intergenic |
GAATTGAGAACCCAGTGCAC+AGG | 0.556607 | 4.2:+68276940 | MS.gene85016:CDS |
TCATATCTAGGATGCTAAAG+AGG | 0.576504 | 4.2:+68279457 | MS.gene85016:intron |
GAGATCGATACCTTGCAAAA+GGG | 0.585390 | 4.2:+68279500 | MS.gene85016:CDS |
AGGATTAGGGACTATGGCAA+TGG | 0.589394 | 4.2:+68280503 | MS.gene85016:CDS |
AAATAAGACATACCCTTTGG+TGG | 0.590074 | 4.2:-68277084 | None:intergenic |
GGGGCTTCTGAAGAAGGCTA+AGG | 0.602676 | 4.2:+68276989 | MS.gene85016:CDS |
GATCTCTTGCTTGAGCACAT+TGG | 0.611486 | 4.2:-68279483 | None:intergenic |
TGAAATGAAGAACCATGCAA+GGG | 0.614636 | 4.2:+68277582 | MS.gene85016:intron |
CTTTCTGTAAGCGCCGAGCG+GGG | 0.616522 | 4.2:+68276970 | MS.gene85016:CDS |
GAGAAACATACCGAAACAAG+AGG | 0.646849 | 4.2:-68277668 | None:intergenic |
GACTTTCTGTAAGCGCCGAG+CGG | 0.650769 | 4.2:+68276968 | MS.gene85016:CDS |
TAAGGAGGGAACACTTAAGG+CGG | 0.674035 | 4.2:+68285625 | MS.gene85016:intron |
AAGTACTTGAAGTTCACACG+AGG | 0.730119 | 4.2:+68277614 | MS.gene85016:CDS |
AGTACTTGAAGTTCACACGA+GGG | 0.748606 | 4.2:+68277615 | MS.gene85016:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 68276912 | 68285872 | 68276912 | ID=MS.gene85016 |
chr4.2 | mRNA | 68276912 | 68285872 | 68276912 | ID=MS.gene85016.t1;Parent=MS.gene85016 |
chr4.2 | exon | 68276912 | 68277093 | 68276912 | ID=MS.gene85016.t1.exon1;Parent=MS.gene85016.t1 |
chr4.2 | CDS | 68276912 | 68277093 | 68276912 | ID=cds.MS.gene85016.t1;Parent=MS.gene85016.t1 |
chr4.2 | exon | 68277592 | 68277679 | 68277592 | ID=MS.gene85016.t1.exon2;Parent=MS.gene85016.t1 |
chr4.2 | CDS | 68277592 | 68277679 | 68277592 | ID=cds.MS.gene85016.t1;Parent=MS.gene85016.t1 |
chr4.2 | exon | 68279467 | 68279528 | 68279467 | ID=MS.gene85016.t1.exon3;Parent=MS.gene85016.t1 |
chr4.2 | CDS | 68279467 | 68279528 | 68279467 | ID=cds.MS.gene85016.t1;Parent=MS.gene85016.t1 |
chr4.2 | exon | 68280488 | 68280587 | 68280488 | ID=MS.gene85016.t1.exon4;Parent=MS.gene85016.t1 |
chr4.2 | CDS | 68280488 | 68280587 | 68280488 | ID=cds.MS.gene85016.t1;Parent=MS.gene85016.t1 |
chr4.2 | exon | 68280704 | 68280745 | 68280704 | ID=MS.gene85016.t1.exon5;Parent=MS.gene85016.t1 |
chr4.2 | CDS | 68280704 | 68280745 | 68280704 | ID=cds.MS.gene85016.t1;Parent=MS.gene85016.t1 |
chr4.2 | exon | 68285629 | 68285670 | 68285629 | ID=MS.gene85016.t1.exon6;Parent=MS.gene85016.t1 |
chr4.2 | CDS | 68285629 | 68285670 | 68285629 | ID=cds.MS.gene85016.t1;Parent=MS.gene85016.t1 |
chr4.2 | exon | 68285780 | 68285872 | 68285780 | ID=MS.gene85016.t1.exon7;Parent=MS.gene85016.t1 |
chr4.2 | CDS | 68285780 | 68285872 | 68285780 | ID=cds.MS.gene85016.t1;Parent=MS.gene85016.t1 |
Gene Sequence |
Protein sequence |