Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene85960.t1 | XP_013465598.1 | 98.5 | 545 | 8 | 0 | 1 | 545 | 1 | 545 | 5.30E-294 | 1019.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene85960.t1 | Q9S9N8 | 79.2 | 525 | 96 | 2 | 16 | 538 | 6 | 519 | 1.2e-230 | 800.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene85960.t1 | A0A072VNA9 | 98.5 | 545 | 8 | 0 | 1 | 545 | 26 | 570 | 3.8e-294 | 1019.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene051895 | MS.gene85960 | 0.813804 | 2.13E-51 | -1.69E-46 |
MS.gene059868 | MS.gene85960 | 0.803914 | 2.78E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene85960 | MS.gene44507 | PPI |
MS.gene85960 | MS.gene09558 | PPI |
MS.gene85960 | MS.gene83599 | PPI |
MS.gene85960 | MS.gene015216 | PPI |
MS.gene85960 | MS.gene011751 | PPI |
MS.gene85960 | MS.gene57183 | PPI |
MS.gene85960 | MS.gene067471 | PPI |
MS.gene85960 | MS.gene041914 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene85960.t1 | MTR_2g104990 | 98.532 | 545 | 8 | 0 | 1 | 545 | 26 | 570 | 0.0 | 1091 |
MS.gene85960.t1 | MTR_2g104990 | 98.532 | 545 | 8 | 0 | 1 | 545 | 1 | 545 | 0.0 | 1090 |
MS.gene85960.t1 | MTR_3g088440 | 59.010 | 505 | 196 | 2 | 41 | 537 | 30 | 531 | 0.0 | 617 |
MS.gene85960.t1 | MTR_3g088460 | 58.869 | 513 | 201 | 3 | 30 | 537 | 31 | 538 | 0.0 | 587 |
MS.gene85960.t1 | MTR_3g088440 | 64.266 | 361 | 129 | 0 | 41 | 401 | 30 | 390 | 3.42e-175 | 500 |
MS.gene85960.t1 | MTR_3g088460 | 63.874 | 382 | 133 | 1 | 30 | 411 | 31 | 407 | 1.61e-172 | 494 |
MS.gene85960.t1 | MTR_3g102620 | 41.542 | 467 | 251 | 8 | 32 | 492 | 55 | 505 | 6.12e-107 | 330 |
MS.gene85960.t1 | MTR_5g016270 | 41.667 | 456 | 244 | 8 | 44 | 492 | 51 | 491 | 4.86e-106 | 327 |
MS.gene85960.t1 | MTR_4g095075 | 42.989 | 435 | 230 | 8 | 30 | 456 | 40 | 464 | 5.58e-106 | 327 |
MS.gene85960.t1 | MTR_8g028050 | 37.953 | 469 | 264 | 10 | 33 | 492 | 72 | 522 | 3.67e-96 | 303 |
MS.gene85960.t1 | MTR_4g094602 | 58.042 | 143 | 57 | 1 | 216 | 355 | 1 | 143 | 1.48e-50 | 170 |
MS.gene85960.t1 | MTR_0041s0030 | 27.340 | 406 | 263 | 13 | 54 | 452 | 38 | 418 | 3.86e-33 | 135 |
MS.gene85960.t1 | MTR_2g062640 | 25.789 | 380 | 222 | 13 | 90 | 464 | 3 | 327 | 3.58e-24 | 105 |
MS.gene85960.t1 | MTR_2g062640 | 26.836 | 354 | 232 | 13 | 118 | 464 | 26 | 359 | 1.62e-23 | 103 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene85960.t1 | AT1G15960 | 79.238 | 525 | 96 | 2 | 16 | 538 | 6 | 519 | 0.0 | 857 |
MS.gene85960.t1 | AT1G80830 | 77.289 | 546 | 109 | 4 | 1 | 545 | 1 | 532 | 0.0 | 852 |
MS.gene85960.t1 | AT1G80830 | 77.289 | 546 | 109 | 4 | 1 | 545 | 1 | 532 | 0.0 | 852 |
MS.gene85960.t1 | AT5G67330 | 41.706 | 422 | 232 | 6 | 42 | 456 | 46 | 460 | 6.52e-105 | 325 |
MS.gene85960.t1 | AT1G47240 | 39.958 | 473 | 261 | 9 | 30 | 496 | 53 | 508 | 8.31e-105 | 325 |
MS.gene85960.t1 | AT2G23150 | 39.956 | 458 | 253 | 8 | 44 | 494 | 52 | 494 | 4.39e-101 | 315 |
MS.gene85960.t1 | AT4G18790 | 38.737 | 475 | 257 | 11 | 30 | 492 | 54 | 506 | 9.16e-97 | 304 |
MS.gene85960.t1 | AT5G03280 | 27.865 | 384 | 248 | 9 | 54 | 427 | 24 | 388 | 1.48e-33 | 136 |
Find 128 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTGTCATTTGCTGACTTTC+AGG | 0.118858 | 2.1:-928555 | None:intergenic |
ATTGGTGGCTCTGCTGGGGC+TGG | 0.172769 | 2.1:+927528 | MS.gene85960:CDS |
GATAATCGGTTCTCTTATTA+TGG | 0.190853 | 2.1:+928347 | MS.gene85960:CDS |
TTCAGGCATGGCAGTATATT+TGG | 0.208592 | 2.1:+928467 | MS.gene85960:CDS |
GCGGTCATTGGTGGCTCTGC+TGG | 0.238481 | 2.1:+927522 | MS.gene85960:CDS |
GGGTGTCAAACTTTATTCTT+TGG | 0.241037 | 2.1:+925972 | MS.gene85960:CDS |
GCCCCAGGTTGTTCTAATTC+TGG | 0.243790 | 2.1:+924855 | MS.gene85960:CDS |
GATCTTATCTTACAGTTTCC+TGG | 0.244897 | 2.1:-925508 | None:intergenic |
AGAAAGTGCCTTTGCTCTTA+TGG | 0.256302 | 2.1:+926967 | MS.gene85960:CDS |
CTCTTAGCATTACAGCAATA+TGG | 0.276711 | 2.1:+926343 | MS.gene85960:CDS |
ATGACAAATGAACAAGTAAA+TGG | 0.298259 | 2.1:+928570 | MS.gene85960:CDS |
TTGGTGGCTCTGCTGGGGCT+GGG | 0.303957 | 2.1:+927529 | MS.gene85960:CDS |
AAGGTGTTTCTTGGGATATT+AGG | 0.304324 | 2.1:+928441 | MS.gene85960:CDS |
AAATGGAGTTCAAAATTGTT+TGG | 0.313605 | 2.1:+927239 | MS.gene85960:CDS |
CTTAGAATGTCTTGGGGAAA+TGG | 0.318045 | 2.1:+927222 | MS.gene85960:intron |
TAAAGAGGGTACACACCTTT+TGG | 0.324952 | 2.1:+928521 | MS.gene85960:CDS |
TGATATTCTTCATTTATATT+CGG | 0.332529 | 2.1:-927046 | None:intergenic |
GCCAATCTTGGAGTGGTTAC+TGG | 0.337193 | 2.1:+925820 | MS.gene85960:CDS |
GGTCTTGCAATTTCTCTCCT+TGG | 0.337870 | 2.1:+926610 | MS.gene85960:CDS |
TCCGCCATTACTTGGATAAT+CGG | 0.341900 | 2.1:+928333 | MS.gene85960:CDS |
TGCTCTTCAACGTACCTGTT+TGG | 0.342285 | 2.1:+926284 | MS.gene85960:CDS |
TCAGTTACTTTGGATCATAT+TGG | 0.346866 | 2.1:+925759 | MS.gene85960:intron |
CGGTCATTGGTGGCTCTGCT+GGG | 0.355327 | 2.1:+927523 | MS.gene85960:CDS |
GGAATTGCTTTGCTTGCATC+AGG | 0.359030 | 2.1:+927260 | MS.gene85960:CDS |
ATTTGAGCTTCCCTTTGCTT+TGG | 0.359502 | 2.1:+927977 | MS.gene85960:CDS |
ACTCGGCATTGGTACTTTCC+AGG | 0.364353 | 2.1:+926755 | MS.gene85960:CDS |
ATTGTGGCCAAGGTGTTTCT+TGG | 0.367006 | 2.1:+928432 | MS.gene85960:CDS |
GCCATTACTTAGAATGTCTT+GGG | 0.369772 | 2.1:+927215 | MS.gene85960:intron |
CAATCGATGGCTGCCAATCT+TGG | 0.372875 | 2.1:+925808 | MS.gene85960:CDS |
TGCAGATATCCGCCATTACT+TGG | 0.375632 | 2.1:+928325 | MS.gene85960:intron |
AGTTTGATTGTTGCGGTCAT+TGG | 0.376126 | 2.1:+927510 | MS.gene85960:CDS |
AACAATCAAACTAGGAACTA+TGG | 0.376164 | 2.1:-927499 | None:intergenic |
GGTGTCAAACTTTATTCTTT+GGG | 0.378048 | 2.1:+925973 | MS.gene85960:CDS |
GGTCAAAGTTCTACGATAAC+AGG | 0.379774 | 2.1:+927281 | MS.gene85960:CDS |
GTTTCTGTTATTTCTGTAAG+TGG | 0.391479 | 2.1:+927007 | MS.gene85960:CDS |
AATTTCTCTCCTTGGTGCTA+TGG | 0.403043 | 2.1:+926618 | MS.gene85960:CDS |
TCTTAGCATTACAGCAATAT+GGG | 0.404272 | 2.1:+926344 | MS.gene85960:CDS |
TACGACTGACACCATGGATT+CGG | 0.407918 | 2.1:+927454 | MS.gene85960:CDS |
TTGTGGCCAAGGTGTTTCTT+GGG | 0.420309 | 2.1:+928433 | MS.gene85960:CDS |
TGGGATGTCACAGGCCACTA+TGG | 0.423728 | 2.1:-926011 | None:intergenic |
AATATATACTACTTAATGAA+TGG | 0.424385 | 2.1:+928375 | MS.gene85960:CDS |
CAAAGGGAAGCTCAAATGAT+AGG | 0.430883 | 2.1:-927971 | None:intergenic |
GTTGAGACGGATCTACAATC+TGG | 0.432234 | 2.1:+925623 | MS.gene85960:intron |
AACAATTTGATCAGTATTTG+TGG | 0.441465 | 2.1:-924940 | None:intergenic |
TGCCATTACTTAGAATGTCT+TGG | 0.443971 | 2.1:+927214 | MS.gene85960:intron |
ACCAGTAACCACTCCAAGAT+TGG | 0.444301 | 2.1:-925821 | None:intergenic |
AATTCATCTCAATACCTTCT+GGG | 0.447355 | 2.1:-926030 | None:intergenic |
TTTACAACTTCTTTAGCATC+AGG | 0.449320 | 2.1:-926547 | None:intergenic |
ACGTTCAGTTCGCGGAATCA+AGG | 0.457249 | 2.1:+926786 | MS.gene85960:CDS |
CTAAAAGGGAGTGGTGCTAC+TGG | 0.461708 | 2.1:+926589 | MS.gene85960:CDS |
TTATTTGCATACATGGGGCC+TGG | 0.468558 | 2.1:+925457 | MS.gene85960:CDS |
CACTAGTAGCAAAACCAAGA+TGG | 0.473707 | 2.1:+928016 | MS.gene85960:CDS |
TCCATTGCATACATAGATCC+AGG | 0.477792 | 2.1:+925490 | MS.gene85960:CDS |
ACGATAACAGGAACCTATGC+AGG | 0.487911 | 2.1:+927293 | MS.gene85960:CDS |
CCACAATTCATTTCAAGCAC+TGG | 0.491584 | 2.1:+924882 | MS.gene85960:CDS |
TATTGCTGAAATTGCCATAG+TGG | 0.492449 | 2.1:+925997 | MS.gene85960:CDS |
AAAATACCACGTTCAGTTCG+CGG | 0.494048 | 2.1:+926778 | MS.gene85960:CDS |
GTTACTTTGGATCATATTGG+TGG | 0.496123 | 2.1:+925762 | MS.gene85960:intron |
TCTCTTCCTGCACTCGGCAT+TGG | 0.496228 | 2.1:+926744 | MS.gene85960:CDS |
TTCAACGTACCTGTTTGGAT+TGG | 0.497509 | 2.1:+926289 | MS.gene85960:CDS |
GATGCTAAAGAAGTTGTAAA+GGG | 0.498286 | 2.1:+926550 | MS.gene85960:CDS |
GAGCATCAATGTGCTGAGTC+CGG | 0.509577 | 2.1:-926323 | None:intergenic |
ACTAGTAGCAAAACCAAGAT+GGG | 0.509957 | 2.1:+928017 | MS.gene85960:CDS |
AGTAGCACACCAATCCAAAC+AGG | 0.511891 | 2.1:-926298 | None:intergenic |
AGAATATCAAATGAGCTGTC+AGG | 0.514229 | 2.1:+927060 | MS.gene85960:CDS |
TGATGCTAAAGAAGTTGTAA+AGG | 0.519740 | 2.1:+926549 | MS.gene85960:CDS |
TTGATTGTTGCGGTCATTGG+TGG | 0.523728 | 2.1:+927513 | MS.gene85960:CDS |
AGTTCCTAGTTTGATTGTTG+CGG | 0.526493 | 2.1:+927503 | MS.gene85960:CDS |
GGTGTCAATAAGCGGAGCAT+TGG | 0.534596 | 2.1:-924919 | None:intergenic |
TGACATAGAAATTGTGGCCA+AGG | 0.536322 | 2.1:+928422 | MS.gene85960:CDS |
TCATAGTGACATAGAAATTG+TGG | 0.537613 | 2.1:+928416 | MS.gene85960:CDS |
TGGATTGGTGTGCTACTGAC+CGG | 0.537679 | 2.1:+926304 | MS.gene85960:CDS |
TTGAGACGGATCTACAATCT+GGG | 0.537839 | 2.1:+925624 | MS.gene85960:CDS |
TGGGGCACAATATAAATATG+AGG | 0.538942 | 2.1:+925643 | MS.gene85960:CDS |
GGTACATGTTAACTCTATCA+TGG | 0.540572 | 2.1:+928040 | MS.gene85960:CDS |
TGCAGGGCAGTATGTCATGC+AGG | 0.544266 | 2.1:+927310 | MS.gene85960:CDS |
GCAATGGAAACAAGAAATCC+AGG | 0.544675 | 2.1:-925475 | None:intergenic |
AAAGTACCAATGCCGAGTGC+AGG | 0.550845 | 2.1:-926750 | None:intergenic |
AAGTGCCTTTGCTCTTATGG+TGG | 0.551298 | 2.1:+926970 | MS.gene85960:CDS |
GGCATGGCAGTATATTTGGC+CGG | 0.551698 | 2.1:+928471 | MS.gene85960:CDS |
AGCAATTGTAAACACAAGAA+AGG | 0.554039 | 2.1:-926491 | None:intergenic |
AAGCACAAGATATGCTATAC+CGG | 0.555109 | 2.1:-928490 | None:intergenic |
AAATAACAGAAACATTTATG+AGG | 0.555460 | 2.1:-926997 | None:intergenic |
AGGTTTCACATACTCTAAGT+AGG | 0.556394 | 2.1:-927108 | None:intergenic |
TCCTGGATCTATGTATGCAA+TGG | 0.557782 | 2.1:-925491 | None:intergenic |
AAAATTTATTTGCATACATG+GGG | 0.559327 | 2.1:+925452 | MS.gene85960:CDS |
TGTCCAGAATTAGAACAACC+TGG | 0.566138 | 2.1:-924858 | None:intergenic |
TTGATTCCGCGAACTGAACG+TGG | 0.568877 | 2.1:-926784 | None:intergenic |
AATACCTTCTGGGATGTCAC+AGG | 0.569404 | 2.1:-926020 | None:intergenic |
ATAATCACTTGCAGTTGAGA+CGG | 0.574710 | 2.1:+925610 | MS.gene85960:intron |
AGGAGTGGTACCAAAGCAAA+GGG | 0.575001 | 2.1:-927987 | None:intergenic |
GTGCCGCAACTAAAAGGGAG+TGG | 0.578359 | 2.1:+926580 | MS.gene85960:CDS |
GAGGAGTGGTACCAAAGCAA+AGG | 0.578409 | 2.1:-927988 | None:intergenic |
TGCTCTTGTAATTCAATCGA+TGG | 0.578489 | 2.1:+925795 | MS.gene85960:CDS |
CAGGTGCTGTTAGAGCCAAA+AGG | 0.580978 | 2.1:-928536 | None:intergenic |
AAAGAGAATATGGCTGCCCC+AGG | 0.582222 | 2.1:+924840 | None:intergenic |
GTCCAGAATTAGAACAACCT+GGG | 0.583047 | 2.1:-924857 | None:intergenic |
CATGACATACTGCCCTGCAT+AGG | 0.585306 | 2.1:-927306 | None:intergenic |
ATTGTAGAGCTGAATATTCG+CGG | 0.585585 | 2.1:+925951 | MS.gene85960:CDS |
ATGACCGCAACAATCAAACT+AGG | 0.585887 | 2.1:-927507 | None:intergenic |
CCAGTGCTTGAAATGAATTG+TGG | 0.588224 | 2.1:-924882 | None:intergenic |
CAATAAGCGGAGCATTGGAA+AGG | 0.588722 | 2.1:-924914 | None:intergenic |
GTTAGCATATTCCGAATCCA+TGG | 0.596442 | 2.1:-927465 | None:intergenic |
TTGATTTACGACTGACACCA+TGG | 0.598584 | 2.1:+927448 | MS.gene85960:CDS |
TTCACATACTCTAAGTAGGA+AGG | 0.602936 | 2.1:-927104 | None:intergenic |
TTGTAGAGCTGAATATTCGC+GGG | 0.603523 | 2.1:+925952 | MS.gene85960:CDS |
TATATTCGGAGAATTGCAAA+CGG | 0.605578 | 2.1:-927032 | None:intergenic |
GAAGAGCATATTTAACGCAA+AGG | 0.606833 | 2.1:-926269 | None:intergenic |
CCACAATCTCTTCCTGCACT+CGG | 0.612477 | 2.1:+926738 | MS.gene85960:CDS |
TAATATCCCAAGAAACACCT+TGG | 0.615738 | 2.1:-928439 | None:intergenic |
AGAACCGATTATCCAAGTAA+TGG | 0.617458 | 2.1:-928337 | None:intergenic |
GAAAGCCACCATAAGAGCAA+AGG | 0.627298 | 2.1:-926975 | None:intergenic |
CCGAGTGCAGGAAGAGATTG+TGG | 0.627483 | 2.1:-926738 | None:intergenic |
GGTCATTGGTGGCTCTGCTG+GGG | 0.630348 | 2.1:+927524 | MS.gene85960:CDS |
CCATTACTTAGAATGTCTTG+GGG | 0.636359 | 2.1:+927216 | MS.gene85960:intron |
ACCGATTATCCAAGTAATGG+CGG | 0.641211 | 2.1:-928334 | None:intergenic |
GTATTTGTGGTGTCAATAAG+CGG | 0.647238 | 2.1:-924927 | None:intergenic |
CTAGTAGCAAAACCAAGATG+GGG | 0.648963 | 2.1:+928018 | MS.gene85960:CDS |
CTTAGCATTACAGCAATATG+GGG | 0.651366 | 2.1:+926345 | MS.gene85960:CDS |
CTACTAGTGAACTTGAGGAG+TGG | 0.652111 | 2.1:-928002 | None:intergenic |
GTGGCCTGTGACATCCCAGA+AGG | 0.672235 | 2.1:+926016 | MS.gene85960:CDS |
CGATAACAGGAACCTATGCA+GGG | 0.673315 | 2.1:+927294 | MS.gene85960:CDS |
GATGGCTGCCAATCTTGGAG+TGG | 0.683939 | 2.1:+925813 | MS.gene85960:CDS |
TCCAGAATTAGAACAACCTG+GGG | 0.695837 | 2.1:-924856 | None:intergenic |
TCTGCTGGACTACTTCTCTG+AGG | 0.720336 | 2.1:-928639 | None:intergenic |
TAGTAGCAAAACCAAGATGG+GGG | 0.725300 | 2.1:+928019 | MS.gene85960:CDS |
TGAGACGGATCTACAATCTG+GGG | 0.726732 | 2.1:+925625 | MS.gene85960:CDS |
ACGGCATAACCATAGCACCA+AGG | 0.756062 | 2.1:-926627 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAATTTATTTGCATACAT+GGG | + | chr2.1:925451-925470 | MS.gene85960:CDS | 15.0% |
!! | AACAACTAGAAAAAAAATTA+TGG | - | chr2.1:927590-927609 | None:intergenic | 15.0% |
!! | AATATATACTACTTAATGAA+TGG | + | chr2.1:928375-928394 | MS.gene85960:CDS | 15.0% |
!! | ACTTTATATACAATTGTTAT+TGG | + | chr2.1:927151-927170 | MS.gene85960:intron | 15.0% |
!! | TGATATTCTTCATTTATATT+CGG | - | chr2.1:927049-927068 | None:intergenic | 15.0% |
!!! | AATTTTTTTTCTAGTTGTTT+TGG | + | chr2.1:927591-927610 | MS.gene85960:intron | 15.0% |
!! | AAAATTTATTTGCATACATG+GGG | + | chr2.1:925452-925471 | MS.gene85960:CDS | 20.0% |
!! | AAATAACAGAAACATTTATG+AGG | - | chr2.1:927000-927019 | None:intergenic | 20.0% |
!! | AACAAAAATATTTGTCAACA+TGG | + | chr2.1:927848-927867 | MS.gene85960:intron | 20.0% |
!! | ATAAATGTTGAAAGAGAAAA+AGG | - | chr2.1:926843-926862 | None:intergenic | 20.0% |
!! | ATAGAAAACACATAAATGAA+TGG | - | chr2.1:925412-925431 | None:intergenic | 20.0% |
!! | GAAAAATTTATTTGCATACA+TGG | + | chr2.1:925450-925469 | MS.gene85960:CDS | 20.0% |
!!! | ACTTTTACTAAATAAAGTTG+TGG | + | chr2.1:925866-925885 | MS.gene85960:intron | 20.0% |
!!! | AGAATACATTTTAAGAGAAA+AGG | - | chr2.1:926687-926706 | None:intergenic | 20.0% |
!!! | ATAAACACACTACATTTTAT+AGG | + | chr2.1:926097-926116 | MS.gene85960:intron | 20.0% |
!!! | ATATACAATTGTTATTGGTA+AGG | + | chr2.1:927156-927175 | MS.gene85960:intron | 20.0% |
!!! | ATTTAACAATTTTCTTTGAC+AGG | + | chr2.1:926922-926941 | MS.gene85960:intron | 20.0% |
!!! | CATATTTTCCATTTTTCTTT+CGG | + | chr2.1:926178-926197 | MS.gene85960:intron | 20.0% |
!!! | CTCTTTCAAAACATTTTATT+TGG | + | chr2.1:925262-925281 | MS.gene85960:intron | 20.0% |
!!! | CTTAAGGCTTTATAAAAATT+TGG | - | chr2.1:926149-926168 | None:intergenic | 20.0% |
!!! | TAAACACACTACATTTTATA+GGG | + | chr2.1:926098-926117 | MS.gene85960:intron | 20.0% |
! | AAATATGGTTAGTGTTCTTA+AGG | - | chr2.1:926165-926184 | None:intergenic | 25.0% |
! | AAATGGAGTTCAAAATTGTT+TGG | + | chr2.1:927239-927258 | MS.gene85960:CDS | 25.0% |
! | AACAATTTGATCAGTATTTG+TGG | - | chr2.1:924943-924962 | None:intergenic | 25.0% |
! | AAGAGAAAAGGAAAACAAAA+TGG | - | chr2.1:926675-926694 | None:intergenic | 25.0% |
! | AGACATATTGTCAAGTAAAA+AGG | - | chr2.1:927637-927656 | None:intergenic | 25.0% |
! | AGTTTACTGTATTCATTCTA+TGG | + | chr2.1:926369-926388 | MS.gene85960:intron | 25.0% |
! | ATCCAAAGTAACTGAAAAAA+TGG | - | chr2.1:925754-925773 | None:intergenic | 25.0% |
! | ATGACAAATGAACAAGTAAA+TGG | + | chr2.1:928570-928589 | MS.gene85960:CDS | 25.0% |
! | CGAAAGAAAAATGGAAAATA+TGG | - | chr2.1:926180-926199 | None:intergenic | 25.0% |
! | CTAGAAAAAAAATTATGGCA+AGG | - | chr2.1:927585-927604 | None:intergenic | 25.0% |
! | GAAGAATTAGAAACATCAAA+AGG | - | chr2.1:927395-927414 | None:intergenic | 25.0% |
! | GATCAACAACAAAACAAAAA+TGG | - | chr2.1:926444-926463 | None:intergenic | 25.0% |
! | TATGGTTTGATATCATAAAG+AGG | + | chr2.1:926387-926406 | MS.gene85960:intron | 25.0% |
! | TTACAATATACACAAGTAAC+AGG | - | chr2.1:927131-927150 | None:intergenic | 25.0% |
! | TTATGACATTACTACAATCA+CGG | - | chr2.1:926866-926885 | None:intergenic | 25.0% |
! | TTCCAAAATATTAGTCATAG+AGG | - | chr2.1:928251-928270 | None:intergenic | 25.0% |
!!! | CAATTTTTTTCCCTTCTTTA+GGG | + | chr2.1:927420-927439 | MS.gene85960:intron | 25.0% |
!!! | TTTTTGTTTTGTTGTTGATC+AGG | + | chr2.1:926444-926463 | MS.gene85960:intron | 25.0% |
AAAATATTAGTCATAGAGGC+AGG | - | chr2.1:928247-928266 | None:intergenic | 30.0% | |
AAACAAACAACTCTTGACAT+TGG | - | chr2.1:925381-925400 | None:intergenic | 30.0% | |
AAAGAAGGGAAAAAAATTGC+AGG | - | chr2.1:927419-927438 | None:intergenic | 30.0% | |
AAATATTTGCGACATTCCTT+TGG | - | chr2.1:925131-925150 | None:intergenic | 30.0% | |
AAATGGTGAAAAAGAGATGA+AGG | - | chr2.1:925737-925756 | None:intergenic | 30.0% | |
AAATTCATCTCAATACCTTC+TGG | - | chr2.1:926034-926053 | None:intergenic | 30.0% | |
AACAATCAAACTAGGAACTA+TGG | - | chr2.1:927502-927521 | None:intergenic | 30.0% | |
AAGAAGAGATGAAGAACTAA+CGG | - | chr2.1:926649-926668 | None:intergenic | 30.0% | |
AAGAAGGGAAAAAAATTGCA+GGG | - | chr2.1:927418-927437 | None:intergenic | 30.0% | |
AAGGGATTGAATGAGAATTA+AGG | - | chr2.1:924984-925003 | None:intergenic | 30.0% | |
AATCAAGAAATCCCTAAAGA+AGG | - | chr2.1:927434-927453 | None:intergenic | 30.0% | |
AATTCATCTCAATACCTTCT+GGG | - | chr2.1:926033-926052 | None:intergenic | 30.0% | |
ACTTTATATAACCATGTGCA+CGG | - | chr2.1:927804-927823 | None:intergenic | 30.0% | |
AGCAATTGTAAACACAAGAA+AGG | - | chr2.1:926494-926513 | None:intergenic | 30.0% | |
ATCAAGAAATCCCTAAAGAA+GGG | - | chr2.1:927433-927452 | None:intergenic | 30.0% | |
CAAAGTGGACACAAAAAATA+CGG | - | chr2.1:927360-927379 | None:intergenic | 30.0% | |
CATATAGAACTGAATGAATC+AGG | - | chr2.1:925903-925922 | None:intergenic | 30.0% | |
GAAAACACATAAATGAATGG+TGG | - | chr2.1:925409-925428 | None:intergenic | 30.0% | |
GAATGCATACACAAAGAAAA+GGG | - | chr2.1:927889-927908 | None:intergenic | 30.0% | |
GATGCTAAAGAAGTTGTAAA+GGG | + | chr2.1:926550-926569 | MS.gene85960:CDS | 30.0% | |
GGTGTCAAACTTTATTCTTT+GGG | + | chr2.1:925973-925992 | MS.gene85960:CDS | 30.0% | |
GTTCAAAAAGGATTAAGTAG+AGG | + | chr2.1:927778-927797 | MS.gene85960:intron | 30.0% | |
TAGGGATTTATTTAGTGCTT+AGG | + | chr2.1:926116-926135 | MS.gene85960:intron | 30.0% | |
TATATTCGGAGAATTGCAAA+CGG | - | chr2.1:927035-927054 | None:intergenic | 30.0% | |
TCATAGTGACATAGAAATTG+TGG | + | chr2.1:928416-928435 | MS.gene85960:CDS | 30.0% | |
TCTTAGCATTACAGCAATAT+GGG | + | chr2.1:926344-926363 | MS.gene85960:CDS | 30.0% | |
TGAATGCATACACAAAGAAA+AGG | - | chr2.1:927890-927909 | None:intergenic | 30.0% | |
TGATGCTAAAGAAGTTGTAA+AGG | + | chr2.1:926549-926568 | MS.gene85960:CDS | 30.0% | |
TGTCATAAGTCTGTAAATTG+TGG | + | chr2.1:926878-926897 | MS.gene85960:intron | 30.0% | |
TTACTAAATAAAGTTGTGGC+TGG | + | chr2.1:925870-925889 | MS.gene85960:intron | 30.0% | |
TTATAGTACTTATGATCACG+AGG | + | chr2.1:925688-925707 | MS.gene85960:intron | 30.0% | |
TTATTTAGTGCTTAGGATTG+AGG | + | chr2.1:926123-926142 | MS.gene85960:intron | 30.0% | |
TTGTACATATATGCAGTGAT+TGG | + | chr2.1:926241-926260 | MS.gene85960:intron | 30.0% | |
TTTACAACTTCTTTAGCATC+AGG | - | chr2.1:926550-926569 | None:intergenic | 30.0% | |
! | AAGATAAGCTATGTTTTGCA+AGG | - | chr2.1:928221-928240 | None:intergenic | 30.0% |
! | AGACTTTTAAGCTTCCAAAA+AGG | + | chr2.1:928149-928168 | MS.gene85960:intron | 30.0% |
! | ATGTGTTTTCTATTTTGCAG+AGG | + | chr2.1:925419-925438 | MS.gene85960:intron | 30.0% |
! | GATAATCGGTTCTCTTATTA+TGG | + | chr2.1:928347-928366 | MS.gene85960:CDS | 30.0% |
! | GGAAAGTACATATAGAATCA+TGG | - | chr2.1:926714-926733 | None:intergenic | 30.0% |
! | TAACAATTTTCTTTGACAGG+AGG | + | chr2.1:926925-926944 | MS.gene85960:intron | 30.0% |
! | TCAGTTACTTTGGATCATAT+TGG | + | chr2.1:925759-925778 | MS.gene85960:intron | 30.0% |
! | TGCCTCTATGACTAATATTT+TGG | + | chr2.1:928246-928265 | MS.gene85960:intron | 30.0% |
!! | AAGGCATTCGAAGATATTTT+AGG | - | chr2.1:927618-927637 | None:intergenic | 30.0% |
!! | GTTTCTGTTATTTCTGTAAG+TGG | + | chr2.1:927007-927026 | MS.gene85960:CDS | 30.0% |
!!! | CACCATTTTTTCAGTTACTT+TGG | + | chr2.1:925749-925768 | MS.gene85960:intron | 30.0% |
!!! | GCAATTTTTTTCCCTTCTTT+AGG | + | chr2.1:927419-927438 | MS.gene85960:intron | 30.0% |
AAGAGAAGCCGAAAGAAAAA+TGG | - | chr2.1:926189-926208 | None:intergenic | 35.0% | |
AAGCACAAGATATGCTATAC+CGG | - | chr2.1:928493-928512 | None:intergenic | 35.0% | |
AATTAAGGCAAACTCACATC+AGG | - | chr2.1:924969-924988 | None:intergenic | 35.0% | |
ACTACTCATAACTGCACTAT+TGG | + | chr2.1:927745-927764 | MS.gene85960:intron | 35.0% | |
ACTAGTAGCAAAACCAAGAT+GGG | + | chr2.1:928017-928036 | MS.gene85960:CDS | 35.0% | |
AGAACCGATTATCCAAGTAA+TGG | - | chr2.1:928340-928359 | None:intergenic | 35.0% | |
AGAAGGGAAAAAAATTGCAG+GGG | - | chr2.1:927417-927436 | None:intergenic | 35.0% | |
AGAATATCAAATGAGCTGTC+AGG | + | chr2.1:927060-927079 | MS.gene85960:CDS | 35.0% | |
AGGTTATCAATGCTTCAAAG+TGG | - | chr2.1:927375-927394 | None:intergenic | 35.0% | |
AGGTTTCACATACTCTAAGT+AGG | - | chr2.1:927111-927130 | None:intergenic | 35.0% | |
AGTTCCTAGTTTGATTGTTG+CGG | + | chr2.1:927503-927522 | MS.gene85960:CDS | 35.0% | |
ATAATCACTTGCAGTTGAGA+CGG | + | chr2.1:925610-925629 | MS.gene85960:intron | 35.0% | |
ATTAAGGCAAACTCACATCA+GGG | - | chr2.1:924968-924987 | None:intergenic | 35.0% | |
ATTGTAGAGCTGAATATTCG+CGG | + | chr2.1:925951-925970 | MS.gene85960:CDS | 35.0% | |
CCATTACTTAGAATGTCTTG+GGG | + | chr2.1:927216-927235 | MS.gene85960:intron | 35.0% | |
CTACTATCTGTCATTGTCAT+AGG | - | chr2.1:928186-928205 | None:intergenic | 35.0% | |
CTATGACAATGACAGATAGT+AGG | + | chr2.1:928184-928203 | MS.gene85960:intron | 35.0% | |
CTCTTAGCATTACAGCAATA+TGG | + | chr2.1:926343-926362 | MS.gene85960:CDS | 35.0% | |
CTTAGCATTACAGCAATATG+GGG | + | chr2.1:926345-926364 | MS.gene85960:CDS | 35.0% | |
CTTCCAAAAAGGTCAGAAAT+GGG | + | chr2.1:928160-928179 | MS.gene85960:intron | 35.0% | |
GATCTTATCTTACAGTTTCC+TGG | - | chr2.1:925511-925530 | None:intergenic | 35.0% | |
GCCATTACTTAGAATGTCTT+GGG | + | chr2.1:927215-927234 | MS.gene85960:intron | 35.0% | |
GGCTTCATCTAAGTTCAAAA+AGG | + | chr2.1:927766-927785 | MS.gene85960:intron | 35.0% | |
GGGTGTCAAACTTTATTCTT+TGG | + | chr2.1:925972-925991 | MS.gene85960:CDS | 35.0% | |
GGTACATGTTAACTCTATCA+TGG | + | chr2.1:928040-928059 | MS.gene85960:CDS | 35.0% | |
GTGCTTCGCAAAAATAAAGA+GGG | + | chr2.1:928507-928526 | MS.gene85960:CDS | 35.0% | |
GTTGTATTCTCATGTCATGT+AGG | + | chr2.1:925153-925172 | MS.gene85960:intron | 35.0% | |
TAATATCCCAAGAAACACCT+TGG | - | chr2.1:928442-928461 | None:intergenic | 35.0% | |
TATTGCTGAAATTGCCATAG+TGG | + | chr2.1:925997-926016 | MS.gene85960:CDS | 35.0% | |
TGCCATTACTTAGAATGTCT+TGG | + | chr2.1:927214-927233 | MS.gene85960:intron | 35.0% | |
TGCTCTTGTAATTCAATCGA+TGG | + | chr2.1:925795-925814 | MS.gene85960:CDS | 35.0% | |
TGGAATTTGATCACAATAGC+TGG | - | chr2.1:925051-925070 | None:intergenic | 35.0% | |
TGGGGCACAATATAAATATG+AGG | + | chr2.1:925643-925662 | MS.gene85960:CDS | 35.0% | |
TGTGCTTCGCAAAAATAAAG+AGG | + | chr2.1:928506-928525 | MS.gene85960:CDS | 35.0% | |
TTCACATACTCTAAGTAGGA+AGG | - | chr2.1:927107-927126 | None:intergenic | 35.0% | |
TTTGTAACTGAGCTACATTG+TGG | + | chr2.1:927717-927736 | MS.gene85960:intron | 35.0% | |
! | AAGGTGTTTCTTGGGATATT+AGG | + | chr2.1:928441-928460 | MS.gene85960:CDS | 35.0% |
! | CTTGGGATATTAGGATTTTC+AGG | + | chr2.1:928450-928469 | MS.gene85960:CDS | 35.0% |
! | GAAGAGCATATTTAACGCAA+AGG | - | chr2.1:926272-926291 | None:intergenic | 35.0% |
! | GTATTTGTGGTGTCAATAAG+CGG | - | chr2.1:924930-924949 | None:intergenic | 35.0% |
! | GTTACTTTGGATCATATTGG+TGG | + | chr2.1:925762-925781 | MS.gene85960:intron | 35.0% |
! | TACAATTGCTGCGTGTTTTT+GGG | + | chr2.1:926504-926523 | MS.gene85960:CDS | 35.0% |
! | TTACAATTGCTGCGTGTTTT+TGG | + | chr2.1:926503-926522 | MS.gene85960:CDS | 35.0% |
! | TTTTGCTACTAGTGAACTTG+AGG | - | chr2.1:928010-928029 | None:intergenic | 35.0% |
! | TTTTTGTGCCGCAACTAAAA+GGG | + | chr2.1:926575-926594 | MS.gene85960:CDS | 35.0% |
!! | GATATTAGGATTTTCAGGCA+TGG | + | chr2.1:928455-928474 | MS.gene85960:CDS | 35.0% |
!! | TTTGTCATTTGCTGACTTTC+AGG | - | chr2.1:928558-928577 | None:intergenic | 35.0% |
!!! | GTTTTGTTGTTGATCAGGTT+AGG | + | chr2.1:926449-926468 | MS.gene85960:intron | 35.0% |
AAAATACCACGTTCAGTTCG+CGG | + | chr2.1:926778-926797 | MS.gene85960:CDS | 40.0% | |
AAATTCCACTGTCCACTAAC+GGG | + | chr2.1:925063-925082 | MS.gene85960:intron | 40.0% | |
ACCGATTATCCAAGTAATGG+CGG | - | chr2.1:928337-928356 | None:intergenic | 40.0% | |
AGTTTGATTGTTGCGGTCAT+TGG | + | chr2.1:927510-927529 | MS.gene85960:CDS | 40.0% | |
ATCATAGCTCGTAGATAGCT+AGG | - | chr2.1:925334-925353 | None:intergenic | 40.0% | |
ATCTGATCAGCAGACAAAGA+AGG | - | chr2.1:927948-927967 | None:intergenic | 40.0% | |
ATGACCGCAACAATCAAACT+AGG | - | chr2.1:927510-927529 | None:intergenic | 40.0% | |
ATTTGAGCTTCCCTTTGCTT+TGG | + | chr2.1:927977-927996 | MS.gene85960:CDS | 40.0% | |
ATTTGCGACATTCCTTTGGA+GGG | - | chr2.1:925127-925146 | None:intergenic | 40.0% | |
CAAAGGGAAGCTCAAATGAT+AGG | - | chr2.1:927974-927993 | None:intergenic | 40.0% | |
CAAATTCCACTGTCCACTAA+CGG | + | chr2.1:925062-925081 | MS.gene85960:intron | 40.0% | |
CACTAGTAGCAAAACCAAGA+TGG | + | chr2.1:928016-928035 | MS.gene85960:CDS | 40.0% | |
CATGTCATGTAGGAGTTTCA+GGG | + | chr2.1:925163-925182 | MS.gene85960:intron | 40.0% | |
CCACAATTCATTTCAAGCAC+TGG | + | chr2.1:924882-924901 | MS.gene85960:CDS | 40.0% | |
CCAGTGCTTGAAATGAATTG+TGG | - | chr2.1:924885-924904 | None:intergenic | 40.0% | |
CCCCAAGACATTCTAAGTAA+TGG | - | chr2.1:927219-927238 | None:intergenic | 40.0% | |
CTAGTAGCAAAACCAAGATG+GGG | + | chr2.1:928018-928037 | MS.gene85960:CDS | 40.0% | |
CTTAGAATGTCTTGGGGAAA+TGG | + | chr2.1:927222-927241 | MS.gene85960:intron | 40.0% | |
GCAATGGAAACAAGAAATCC+AGG | - | chr2.1:925478-925497 | None:intergenic | 40.0% | |
GCTTCCAAAAAGGTCAGAAA+TGG | + | chr2.1:928159-928178 | MS.gene85960:intron | 40.0% | |
GGTCAAAGTTCTACGATAAC+AGG | + | chr2.1:927281-927300 | MS.gene85960:CDS | 40.0% | |
GTCCAGAATTAGAACAACCT+GGG | - | chr2.1:924860-924879 | None:intergenic | 40.0% | |
GTTAGCATATTCCGAATCCA+TGG | - | chr2.1:927468-927487 | None:intergenic | 40.0% | |
TAGTAGCAAAACCAAGATGG+GGG | + | chr2.1:928019-928038 | MS.gene85960:CDS | 40.0% | |
TATTTGCGACATTCCTTTGG+AGG | - | chr2.1:925128-925147 | None:intergenic | 40.0% | |
TCATGTCATGTAGGAGTTTC+AGG | + | chr2.1:925162-925181 | MS.gene85960:intron | 40.0% | |
TCCAGAATTAGAACAACCTG+GGG | - | chr2.1:924859-924878 | None:intergenic | 40.0% | |
TCCATTGCATACATAGATCC+AGG | + | chr2.1:925490-925509 | MS.gene85960:CDS | 40.0% | |
TCCGCCATTACTTGGATAAT+CGG | + | chr2.1:928333-928352 | MS.gene85960:CDS | 40.0% | |
TCCTGGATCTATGTATGCAA+TGG | - | chr2.1:925494-925513 | None:intergenic | 40.0% | |
TCTGATCAGCAGACAAAGAA+GGG | - | chr2.1:927947-927966 | None:intergenic | 40.0% | |
TGACATAGAAATTGTGGCCA+AGG | + | chr2.1:928422-928441 | MS.gene85960:CDS | 40.0% | |
TGTCCAGAATTAGAACAACC+TGG | - | chr2.1:924861-924880 | None:intergenic | 40.0% | |
TTCAACGTACCTGTTTGGAT+TGG | + | chr2.1:926289-926308 | MS.gene85960:CDS | 40.0% | |
TTCAGGCATGGCAGTATATT+TGG | + | chr2.1:928467-928486 | MS.gene85960:CDS | 40.0% | |
TTGAGACGGATCTACAATCT+GGG | + | chr2.1:925624-925643 | MS.gene85960:CDS | 40.0% | |
TTGATTTACGACTGACACCA+TGG | + | chr2.1:927448-927467 | MS.gene85960:CDS | 40.0% | |
TTGTAGAGCTGAATATTCGC+GGG | + | chr2.1:925952-925971 | MS.gene85960:CDS | 40.0% | |
TTGTTTGGAAACTCAGTACC+TGG | + | chr2.1:925017-925036 | MS.gene85960:intron | 40.0% | |
! | AAATGAGTTGAGTCGAGGTT+TGG | + | chr2.1:925187-925206 | MS.gene85960:intron | 40.0% |
! | AACTGAACGTGGTATTTTCC+TGG | - | chr2.1:926776-926795 | None:intergenic | 40.0% |
! | CTTTTTGTGCCGCAACTAAA+AGG | + | chr2.1:926574-926593 | MS.gene85960:CDS | 40.0% |
!! | AATTTCTCTCCTTGGTGCTA+TGG | + | chr2.1:926618-926637 | MS.gene85960:CDS | 40.0% |
!! | AGAAAGTGCCTTTGCTCTTA+TGG | + | chr2.1:926967-926986 | MS.gene85960:CDS | 40.0% |
!! | TAAAGAGGGTACACACCTTT+TGG | + | chr2.1:928521-928540 | MS.gene85960:CDS | 40.0% |
AAAGCTGTGGACTCAGTTTG+GGG | - | chr2.1:925090-925109 | None:intergenic | 45.0% | |
AAGTGCCTTTGCTCTTATGG+TGG | + | chr2.1:926970-926989 | MS.gene85960:CDS | 45.0% | |
AATTCCACTGTCCACTAACG+GGG | + | chr2.1:925064-925083 | MS.gene85960:intron | 45.0% | |
ACAAAGCTGTGGACTCAGTT+TGG | - | chr2.1:925092-925111 | None:intergenic | 45.0% | |
ACAGATAGTAGGTCAGACTC+GGG | + | chr2.1:928195-928214 | MS.gene85960:intron | 45.0% | |
ACCAGTAACCACTCCAAGAT+TGG | - | chr2.1:925824-925843 | None:intergenic | 45.0% | |
ACGATAACAGGAACCTATGC+AGG | + | chr2.1:927293-927312 | MS.gene85960:CDS | 45.0% | |
AGGAGTGGTACCAAAGCAAA+GGG | - | chr2.1:927990-928009 | None:intergenic | 45.0% | |
AGTAGCACACCAATCCAAAC+AGG | - | chr2.1:926301-926320 | None:intergenic | 45.0% | |
CAAAGCTGTGGACTCAGTTT+GGG | - | chr2.1:925091-925110 | None:intergenic | 45.0% | |
CGATAACAGGAACCTATGCA+GGG | + | chr2.1:927294-927313 | MS.gene85960:CDS | 45.0% | |
CTACTAGTGAACTTGAGGAG+TGG | - | chr2.1:928005-928024 | None:intergenic | 45.0% | |
GAAAGCCACCATAAGAGCAA+AGG | - | chr2.1:926978-926997 | None:intergenic | 45.0% | |
GACAGATAGTAGGTCAGACT+CGG | + | chr2.1:928194-928213 | MS.gene85960:intron | 45.0% | |
GATCACAATAGCTGGTCGTT+GGG | - | chr2.1:925043-925062 | None:intergenic | 45.0% | |
GGAATTGCTTTGCTTGCATC+AGG | + | chr2.1:927260-927279 | MS.gene85960:CDS | 45.0% | |
GGTCTTGCAATTTCTCTCCT+TGG | + | chr2.1:926610-926629 | MS.gene85960:CDS | 45.0% | |
GTTAACATGTACCCCCATCT+TGG | - | chr2.1:928033-928052 | None:intergenic | 45.0% | |
GTTGAGACGGATCTACAATC+TGG | + | chr2.1:925623-925642 | MS.gene85960:intron | 45.0% | |
TACGACTGACACCATGGATT+CGG | + | chr2.1:927454-927473 | MS.gene85960:CDS | 45.0% | |
TGAGACGGATCTACAATCTG+GGG | + | chr2.1:925625-925644 | MS.gene85960:CDS | 45.0% | |
TGATCACAATAGCTGGTCGT+TGG | - | chr2.1:925044-925063 | None:intergenic | 45.0% | |
TGCAGATATCCGCCATTACT+TGG | + | chr2.1:928325-928344 | MS.gene85960:intron | 45.0% | |
TGCTCTTCAACGTACCTGTT+TGG | + | chr2.1:926284-926303 | MS.gene85960:CDS | 45.0% | |
TTATTTGCATACATGGGGCC+TGG | + | chr2.1:925457-925476 | MS.gene85960:CDS | 45.0% | |
TTGATTGTTGCGGTCATTGG+TGG | + | chr2.1:927513-927532 | MS.gene85960:CDS | 45.0% | |
TTTCCGTCCATACAAAGCTG+TGG | - | chr2.1:925103-925122 | None:intergenic | 45.0% | |
! | ACTGAGTCCACAGCTTTGTA+TGG | + | chr2.1:925093-925112 | MS.gene85960:intron | 45.0% |
! | AGGCCCATTTCTGACCTTTT+TGG | - | chr2.1:928166-928185 | None:intergenic | 45.0% |
! | AGGGTAAATGAGTTGAGTCG+AGG | + | chr2.1:925182-925201 | MS.gene85960:intron | 45.0% |
! | AGTCCACAGCTTTGTATGGA+CGG | + | chr2.1:925097-925116 | MS.gene85960:intron | 45.0% |
! | ATTGTGGCCAAGGTGTTTCT+TGG | + | chr2.1:928432-928451 | MS.gene85960:CDS | 45.0% |
! | CAGTTCTATATGCTGCTTGC+AGG | + | chr2.1:925911-925930 | MS.gene85960:intron | 45.0% |
! | CTATTTTGCAGAGGACAAGC+TGG | + | chr2.1:925428-925447 | MS.gene85960:intron | 45.0% |
! | TTGTGGCCAAGGTGTTTCTT+GGG | + | chr2.1:928433-928452 | MS.gene85960:CDS | 45.0% |
! | TTTGCGACATTCCTTTGGAG+GGG | - | chr2.1:925126-925145 | None:intergenic | 45.0% |
!! | AATACCTTCTGGGATGTCAC+AGG | - | chr2.1:926023-926042 | None:intergenic | 45.0% |
!! | CAATAAGCGGAGCATTGGAA+AGG | - | chr2.1:924917-924936 | None:intergenic | 45.0% |
!! | AAACAAAAATAAAAAAAATA+AGG | - | chr2.1:925003-925022 | None:intergenic | 5.0% |
!! | AACAAAAATAAAAAAAATAA+GGG | - | chr2.1:925002-925021 | None:intergenic | 5.0% |
!!! | TTATTTTTTTTATTTTTGTT+TGG | + | chr2.1:925002-925021 | MS.gene85960:intron | 5.0% |
ACGGCATAACCATAGCACCA+AGG | - | chr2.1:926630-926649 | None:intergenic | 50.0% | |
ACGTTCAGTTCGCGGAATCA+AGG | + | chr2.1:926786-926805 | MS.gene85960:CDS | 50.0% | |
CAATCGATGGCTGCCAATCT+TGG | + | chr2.1:925808-925827 | MS.gene85960:CDS | 50.0% | |
CATGACATACTGCCCTGCAT+AGG | - | chr2.1:927309-927328 | None:intergenic | 50.0% | |
CCACAATCTCTTCCTGCACT+CGG | + | chr2.1:926738-926757 | MS.gene85960:CDS | 50.0% | |
GAAGGCTTGAGCTTGAGCAT+AGG | - | chr2.1:925719-925738 | None:intergenic | 50.0% | |
GAGCATCAATGTGCTGAGTC+CGG | - | chr2.1:926326-926345 | None:intergenic | 50.0% | |
GAGGAGTGGTACCAAAGCAA+AGG | - | chr2.1:927991-928010 | None:intergenic | 50.0% | |
GCCAATCTTGGAGTGGTTAC+TGG | + | chr2.1:925820-925839 | MS.gene85960:CDS | 50.0% | |
GCCCCAGGTTGTTCTAATTC+TGG | + | chr2.1:924855-924874 | MS.gene85960:CDS | 50.0% | |
GGCATGGCAGTATATTTGGC+CGG | + | chr2.1:928471-928490 | MS.gene85960:CDS | 50.0% | |
GGTGTCAATAAGCGGAGCAT+TGG | - | chr2.1:924922-924941 | None:intergenic | 50.0% | |
TCTGCTGGACTACTTCTCTG+AGG | - | chr2.1:928642-928661 | None:intergenic | 50.0% | |
TTAAGTAGAGGCCGTGCACA+TGG | + | chr2.1:927790-927809 | MS.gene85960:intron | 50.0% | |
TTGATTCCGCGAACTGAACG+TGG | - | chr2.1:926787-926806 | None:intergenic | 50.0% | |
! | AAAGTACCAATGCCGAGTGC+AGG | - | chr2.1:926753-926772 | None:intergenic | 50.0% |
!! | ACTCGGCATTGGTACTTTCC+AGG | + | chr2.1:926755-926774 | MS.gene85960:CDS | 50.0% |
!! | CAGGTGCTGTTAGAGCCAAA+AGG | - | chr2.1:928539-928558 | None:intergenic | 50.0% |
!! | CTAAAAGGGAGTGGTGCTAC+TGG | + | chr2.1:926589-926608 | MS.gene85960:CDS | 50.0% |
!! | GCACCACTCCCTTTTAGTTG+CGG | - | chr2.1:926586-926605 | None:intergenic | 50.0% |
!! | TGGATTGGTGTGCTACTGAC+CGG | + | chr2.1:926304-926323 | MS.gene85960:CDS | 50.0% |
ATGGACGGAAACCCCTCCAA+AGG | + | chr2.1:925112-925131 | MS.gene85960:intron | 55.0% | |
CCGAGTGCAGGAAGAGATTG+TGG | - | chr2.1:926741-926760 | None:intergenic | 55.0% | |
GATGGCTGCCAATCTTGGAG+TGG | + | chr2.1:925813-925832 | MS.gene85960:CDS | 55.0% | |
GCAGGAAGAGATTGTGGCTG+AGG | - | chr2.1:926735-926754 | None:intergenic | 55.0% | |
GTGCCGCAACTAAAAGGGAG+TGG | + | chr2.1:926580-926599 | MS.gene85960:CDS | 55.0% | |
TCTCTTCCTGCACTCGGCAT+TGG | + | chr2.1:926744-926763 | MS.gene85960:CDS | 55.0% | |
TGCAGGGCAGTATGTCATGC+AGG | + | chr2.1:927310-927329 | MS.gene85960:CDS | 55.0% | |
TGGGATGTCACAGGCCACTA+TGG | - | chr2.1:926014-926033 | None:intergenic | 55.0% | |
!!! | GCGTGTTTTTGGGCTGAGCT+TGG | + | chr2.1:926514-926533 | MS.gene85960:CDS | 55.0% |
CAATAGCTGGTCGTTGGGCC+AGG | - | chr2.1:925038-925057 | None:intergenic | 60.0% | |
GTGGCCTGTGACATCCCAGA+AGG | + | chr2.1:926016-926035 | MS.gene85960:CDS | 60.0% | |
! | CGGTCATTGGTGGCTCTGCT+GGG | + | chr2.1:927523-927542 | MS.gene85960:CDS | 60.0% |
! | GGTCATTGGTGGCTCTGCTG+GGG | + | chr2.1:927524-927543 | MS.gene85960:CDS | 60.0% |
! | TCAGTTTGGGGCCCCGTTAG+TGG | - | chr2.1:925078-925097 | None:intergenic | 60.0% |
! | ATTGGTGGCTCTGCTGGGGC+TGG | + | chr2.1:927528-927547 | MS.gene85960:CDS | 65.0% |
! | GCGGTCATTGGTGGCTCTGC+TGG | + | chr2.1:927522-927541 | MS.gene85960:CDS | 65.0% |
! | TTGGTGGCTCTGCTGGGGCT+GGG | + | chr2.1:927529-927548 | MS.gene85960:CDS | 65.0% |
! | GGGGCCCCGTTAGTGGACAG+TGG | - | chr2.1:925071-925090 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 924849 | 928671 | 924849 | ID=MS.gene85960 |
chr2.1 | mRNA | 924849 | 928671 | 924849 | ID=MS.gene85960.t1;Parent=MS.gene85960 |
chr2.1 | exon | 924849 | 924971 | 924849 | ID=MS.gene85960.t1.exon1;Parent=MS.gene85960.t1 |
chr2.1 | CDS | 924849 | 924971 | 924849 | ID=cds.MS.gene85960.t1;Parent=MS.gene85960.t1 |
chr2.1 | exon | 925439 | 925517 | 925439 | ID=MS.gene85960.t1.exon2;Parent=MS.gene85960.t1 |
chr2.1 | CDS | 925439 | 925517 | 925439 | ID=cds.MS.gene85960.t1;Parent=MS.gene85960.t1 |
chr2.1 | exon | 925624 | 925664 | 925624 | ID=MS.gene85960.t1.exon3;Parent=MS.gene85960.t1 |
chr2.1 | CDS | 925624 | 925664 | 925624 | ID=cds.MS.gene85960.t1;Parent=MS.gene85960.t1 |
chr2.1 | exon | 925763 | 925841 | 925763 | ID=MS.gene85960.t1.exon4;Parent=MS.gene85960.t1 |
chr2.1 | CDS | 925763 | 925841 | 925763 | ID=cds.MS.gene85960.t1;Parent=MS.gene85960.t1 |
chr2.1 | exon | 925933 | 926037 | 925933 | ID=MS.gene85960.t1.exon5;Parent=MS.gene85960.t1 |
chr2.1 | CDS | 925933 | 926037 | 925933 | ID=cds.MS.gene85960.t1;Parent=MS.gene85960.t1 |
chr2.1 | exon | 926257 | 926366 | 926257 | ID=MS.gene85960.t1.exon6;Parent=MS.gene85960.t1 |
chr2.1 | CDS | 926257 | 926366 | 926257 | ID=cds.MS.gene85960.t1;Parent=MS.gene85960.t1 |
chr2.1 | exon | 926466 | 926647 | 926466 | ID=MS.gene85960.t1.exon7;Parent=MS.gene85960.t1 |
chr2.1 | CDS | 926466 | 926647 | 926466 | ID=cds.MS.gene85960.t1;Parent=MS.gene85960.t1 |
chr2.1 | exon | 926738 | 926807 | 926738 | ID=MS.gene85960.t1.exon8;Parent=MS.gene85960.t1 |
chr2.1 | CDS | 926738 | 926807 | 926738 | ID=cds.MS.gene85960.t1;Parent=MS.gene85960.t1 |
chr2.1 | exon | 926944 | 927117 | 926944 | ID=MS.gene85960.t1.exon9;Parent=MS.gene85960.t1 |
chr2.1 | CDS | 926944 | 927117 | 926944 | ID=cds.MS.gene85960.t1;Parent=MS.gene85960.t1 |
chr2.1 | exon | 927227 | 927331 | 927227 | ID=MS.gene85960.t1.exon10;Parent=MS.gene85960.t1 |
chr2.1 | CDS | 927227 | 927331 | 927227 | ID=cds.MS.gene85960.t1;Parent=MS.gene85960.t1 |
chr2.1 | exon | 927441 | 927572 | 927441 | ID=MS.gene85960.t1.exon11;Parent=MS.gene85960.t1 |
chr2.1 | CDS | 927441 | 927572 | 927441 | ID=cds.MS.gene85960.t1;Parent=MS.gene85960.t1 |
chr2.1 | exon | 927966 | 928061 | 927966 | ID=MS.gene85960.t1.exon12;Parent=MS.gene85960.t1 |
chr2.1 | CDS | 927966 | 928061 | 927966 | ID=cds.MS.gene85960.t1;Parent=MS.gene85960.t1 |
chr2.1 | exon | 928330 | 928671 | 928330 | ID=MS.gene85960.t1.exon13;Parent=MS.gene85960.t1 |
chr2.1 | CDS | 928330 | 928671 | 928330 | ID=cds.MS.gene85960.t1;Parent=MS.gene85960.t1 |
Gene Sequence |
Protein sequence |