Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57183.t1 | XP_003611648.1 | 98.8 | 514 | 6 | 0 | 1 | 514 | 1 | 514 | 1.50E-261 | 911.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57183.t1 | Q9SNV9 | 82.8 | 466 | 77 | 1 | 38 | 500 | 36 | 501 | 3.7e-221 | 768.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57183.t1 | G7K3Y6 | 98.8 | 514 | 6 | 0 | 1 | 514 | 1 | 514 | 1.1e-261 | 911.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene57183 | 0.809429 | 1.90E-50 | -1.69E-46 |
| MS.gene049151 | MS.gene57183 | 0.80991 | 1.50E-50 | -1.69E-46 |
| MS.gene049153 | MS.gene57183 | 0.803667 | 3.12E-49 | -1.69E-46 |
| MS.gene049230 | MS.gene57183 | 0.824539 | 7.64E-54 | -1.69E-46 |
| MS.gene049378 | MS.gene57183 | 0.824226 | 9.05E-54 | -1.69E-46 |
| MS.gene049424 | MS.gene57183 | 0.817112 | 3.90E-52 | -1.69E-46 |
| MS.gene050105 | MS.gene57183 | 0.833203 | 6.10E-56 | -1.69E-46 |
| MS.gene050226 | MS.gene57183 | 0.844141 | 9.08E-59 | -1.69E-46 |
| MS.gene050227 | MS.gene57183 | 0.82776 | 1.31E-54 | -1.69E-46 |
| MS.gene050228 | MS.gene57183 | 0.843416 | 1.42E-58 | -1.69E-46 |
| MS.gene050508 | MS.gene57183 | 0.804609 | 1.99E-49 | -1.69E-46 |
| MS.gene050605 | MS.gene57183 | 0.817005 | 4.13E-52 | -1.69E-46 |
| MS.gene050623 | MS.gene57183 | -0.838198 | 3.32E-57 | -1.69E-46 |
| MS.gene050642 | MS.gene57183 | 0.854786 | 9.76E-62 | -1.69E-46 |
| MS.gene050680 | MS.gene57183 | 0.838736 | 2.41E-57 | -1.69E-46 |
| MS.gene050750 | MS.gene57183 | 0.8057 | 1.18E-49 | -1.69E-46 |
| MS.gene050953 | MS.gene57183 | 0.804949 | 1.69E-49 | -1.69E-46 |
| MS.gene050987 | MS.gene57183 | 0.857279 | 1.82E-62 | -1.69E-46 |
| MS.gene051368 | MS.gene57183 | 0.818301 | 2.11E-52 | -1.69E-46 |
| MS.gene051370 | MS.gene57183 | 0.837786 | 4.23E-57 | -1.69E-46 |
| MS.gene051373 | MS.gene57183 | 0.832772 | 7.81E-56 | -1.69E-46 |
| MS.gene051535 | MS.gene57183 | 0.81915 | 1.35E-52 | -1.69E-46 |
| MS.gene051983 | MS.gene57183 | 0.868407 | 6.68E-66 | -1.69E-46 |
| MS.gene052176 | MS.gene57183 | 0.847291 | 1.27E-59 | -1.69E-46 |
| MS.gene052309 | MS.gene57183 | -0.830451 | 2.92E-55 | -1.69E-46 |
| MS.gene052333 | MS.gene57183 | 0.818945 | 1.50E-52 | -1.69E-46 |
| MS.gene052389 | MS.gene57183 | 0.800151 | 1.65E-48 | -1.69E-46 |
| MS.gene052426 | MS.gene57183 | 0.828145 | 1.06E-54 | -1.69E-46 |
| MS.gene052954 | MS.gene57183 | 0.805766 | 1.14E-49 | -1.69E-46 |
| MS.gene053166 | MS.gene57183 | 0.802133 | 6.48E-49 | -1.69E-46 |
| MS.gene053188 | MS.gene57183 | 0.842351 | 2.73E-58 | -1.69E-46 |
| MS.gene053216 | MS.gene57183 | 0.817768 | 2.78E-52 | -1.69E-46 |
| MS.gene053494 | MS.gene57183 | 0.810383 | 1.18E-50 | -1.69E-46 |
| MS.gene054537 | MS.gene57183 | 0.845546 | 3.80E-59 | -1.69E-46 |
| MS.gene054657 | MS.gene57183 | 0.807258 | 5.52E-50 | -1.69E-46 |
| MS.gene054930 | MS.gene57183 | 0.834875 | 2.33E-56 | -1.69E-46 |
| MS.gene05510 | MS.gene57183 | 0.84521 | 4.68E-59 | -1.69E-46 |
| MS.gene055225 | MS.gene57183 | 0.811722 | 6.07E-51 | -1.69E-46 |
| MS.gene055367 | MS.gene57183 | 0.813941 | 1.98E-51 | -1.69E-46 |
| MS.gene05553 | MS.gene57183 | 0.808375 | 3.19E-50 | -1.69E-46 |
| MS.gene055701 | MS.gene57183 | 0.872242 | 3.70E-67 | -1.69E-46 |
| MS.gene05595 | MS.gene57183 | 0.806762 | 7.03E-50 | -1.69E-46 |
| MS.gene056506 | MS.gene57183 | 0.834323 | 3.20E-56 | -1.69E-46 |
| MS.gene056979 | MS.gene57183 | 0.86784 | 1.02E-65 | -1.69E-46 |
| MS.gene057079 | MS.gene57183 | 0.800031 | 1.74E-48 | -1.69E-46 |
| MS.gene057156 | MS.gene57183 | -0.805134 | 1.55E-49 | -1.69E-46 |
| MS.gene05761 | MS.gene57183 | 0.810799 | 9.63E-51 | -1.69E-46 |
| MS.gene058142 | MS.gene57183 | 0.840501 | 8.37E-58 | -1.69E-46 |
| MS.gene058146 | MS.gene57183 | 0.812107 | 5.01E-51 | -1.69E-46 |
| MS.gene058399 | MS.gene57183 | 0.809682 | 1.68E-50 | -1.69E-46 |
| MS.gene058435 | MS.gene57183 | 0.812945 | 3.28E-51 | -1.69E-46 |
| MS.gene058833 | MS.gene57183 | 0.820969 | 5.18E-53 | -1.69E-46 |
| MS.gene059128 | MS.gene57183 | 0.820578 | 6.37E-53 | -1.69E-46 |
| MS.gene059161 | MS.gene57183 | 0.814383 | 1.58E-51 | -1.69E-46 |
| MS.gene059710 | MS.gene57183 | 0.865885 | 4.27E-65 | -1.69E-46 |
| MS.gene059899 | MS.gene57183 | 0.807796 | 4.24E-50 | -1.69E-46 |
| MS.gene060084 | MS.gene57183 | 0.80071 | 1.27E-48 | -1.69E-46 |
| MS.gene060297 | MS.gene57183 | 0.842808 | 2.06E-58 | -1.69E-46 |
| MS.gene060683 | MS.gene57183 | 0.809536 | 1.80E-50 | -1.69E-46 |
| MS.gene060685 | MS.gene57183 | 0.80572 | 1.16E-49 | -1.69E-46 |
| MS.gene061114 | MS.gene57183 | -0.803861 | 2.85E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene57183 | MS.gene83599 | PPI |
| MS.gene85960 | MS.gene57183 | PPI |
| MS.gene57183 | MS.gene067471 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57183.t1 | MTR_5g016270 | 98.638 | 514 | 7 | 0 | 1 | 514 | 1 | 514 | 0.0 | 1023 |
| MS.gene57183.t1 | MTR_4g095075 | 84.708 | 497 | 70 | 1 | 18 | 514 | 25 | 515 | 0.0 | 848 |
| MS.gene57183.t1 | MTR_3g102620 | 77.282 | 471 | 101 | 1 | 24 | 494 | 44 | 508 | 0.0 | 753 |
| MS.gene57183.t1 | MTR_8g028050 | 67.223 | 479 | 153 | 1 | 16 | 494 | 51 | 525 | 0.0 | 679 |
| MS.gene57183.t1 | MTR_3g088440 | 43.077 | 455 | 235 | 8 | 52 | 490 | 34 | 480 | 1.86e-107 | 330 |
| MS.gene57183.t1 | MTR_2g104990 | 41.667 | 456 | 244 | 8 | 51 | 491 | 44 | 492 | 5.56e-106 | 327 |
| MS.gene57183.t1 | MTR_2g104990 | 41.667 | 456 | 244 | 8 | 51 | 491 | 69 | 517 | 9.17e-106 | 327 |
| MS.gene57183.t1 | MTR_3g088460 | 40.162 | 493 | 268 | 9 | 16 | 490 | 4 | 487 | 3.28e-100 | 312 |
| MS.gene57183.t1 | MTR_3g088440 | 46.479 | 355 | 176 | 6 | 52 | 398 | 34 | 382 | 1.62e-96 | 298 |
| MS.gene57183.t1 | MTR_3g088460 | 41.889 | 413 | 221 | 8 | 16 | 418 | 4 | 407 | 1.29e-95 | 296 |
| MS.gene57183.t1 | MTR_4g028490 | 77.215 | 79 | 17 | 1 | 1 | 79 | 1 | 78 | 1.92e-29 | 110 |
| MS.gene57183.t1 | MTR_0041s0030 | 26.824 | 425 | 257 | 14 | 61 | 466 | 38 | 427 | 2.19e-26 | 114 |
| MS.gene57183.t1 | MTR_2g062640 | 25.424 | 354 | 205 | 10 | 97 | 444 | 3 | 303 | 2.42e-21 | 96.3 |
| MS.gene57183.t1 | MTR_4g094602 | 39.726 | 146 | 75 | 4 | 225 | 360 | 1 | 143 | 5.28e-20 | 87.0 |
| MS.gene57183.t1 | MTR_2g062640 | 25.076 | 331 | 225 | 10 | 120 | 444 | 22 | 335 | 2.96e-16 | 81.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57183.t1 | AT2G23150 | 81.933 | 476 | 85 | 1 | 25 | 500 | 27 | 501 | 0.0 | 805 |
| MS.gene57183.t1 | AT5G67330 | 76.087 | 506 | 115 | 2 | 2 | 507 | 5 | 504 | 0.0 | 778 |
| MS.gene57183.t1 | AT1G47240 | 78.243 | 478 | 100 | 1 | 17 | 494 | 34 | 507 | 0.0 | 777 |
| MS.gene57183.t1 | AT4G18790 | 67.775 | 481 | 148 | 1 | 11 | 491 | 33 | 506 | 0.0 | 665 |
| MS.gene57183.t1 | AT1G15960 | 42.619 | 420 | 227 | 7 | 51 | 463 | 34 | 446 | 8.36e-105 | 323 |
| MS.gene57183.t1 | AT1G80830 | 42.619 | 420 | 227 | 7 | 51 | 463 | 42 | 454 | 1.90e-101 | 315 |
| MS.gene57183.t1 | AT1G80830 | 42.619 | 420 | 227 | 7 | 51 | 463 | 42 | 454 | 1.90e-101 | 315 |
| MS.gene57183.t1 | AT5G03280 | 25.389 | 386 | 265 | 9 | 61 | 439 | 24 | 393 | 3.47e-29 | 122 |
Find 122 sgRNAs with CRISPR-Local
Find 283 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTCCCAATCCTGTATATA+TGG | 0.228743 | 5.3:-9066870 | MS.gene57183:CDS |
| CTCTCATTTGCATGGATGTT+TGG | 0.230544 | 5.3:-9067376 | MS.gene57183:CDS |
| TTCCTCTTTCTTGAGAATTA+TGG | 0.232223 | 5.3:-9067448 | MS.gene57183:CDS |
| GTAATGGCCTTGTTCCTCTT+TGG | 0.242402 | 5.3:-9068649 | MS.gene57183:CDS |
| CTTGGGCAAGGATTGTTCTT+TGG | 0.245807 | 5.3:-9068748 | MS.gene57183:CDS |
| TGCCGTTCTTATTGCTATAA+TGG | 0.260123 | 5.3:-9067401 | MS.gene57183:CDS |
| GGTTTCAAAGGAACAAATAA+TGG | 0.283702 | 5.3:-9066587 | MS.gene57183:CDS |
| TAATGGCCTTGTTCCTCTTT+GGG | 0.305235 | 5.3:-9068648 | MS.gene57183:CDS |
| CGCTGTTATGGCTTCTTATG+TGG | 0.313493 | 5.3:-9068868 | MS.gene57183:CDS |
| TCTGATATTCAAGAGGTTAT+AGG | 0.318147 | 5.3:-9068698 | MS.gene57183:CDS |
| CTGATATTCAAGAGGTTATA+GGG | 0.327415 | 5.3:-9068697 | MS.gene57183:CDS |
| TAGGGAGTGCTATTGCTATT+AGG | 0.333861 | 5.3:-9068679 | MS.gene57183:CDS |
| AGATCTCCTTCCAAGTTTCC+AGG | 0.335579 | 5.3:+9068917 | None:intergenic |
| CTTCAATCTGGTGCAATTGC+TGG | 0.345914 | 5.3:-9068896 | MS.gene57183:CDS |
| TTGCTGGGTATTCGCTGTTA+TGG | 0.347044 | 5.3:-9068880 | MS.gene57183:CDS |
| ATTGATTCCCTTGCTTTGTT+TGG | 0.349044 | 5.3:-9066608 | MS.gene57183:CDS |
| GAATTATGGTGTGAGGAAAT+TGG | 0.350066 | 5.3:-9067434 | MS.gene57183:CDS |
| TTCCTGGCTTGTGGCTGCTC+TGG | 0.351790 | 5.3:-9065715 | MS.gene57183:CDS |
| GACAAATATATTAATAATAA+AGG | 0.352339 | 5.3:+9066993 | None:intergenic |
| TCCTGTATATATGGGGTATT+GGG | 0.357893 | 5.3:-9066861 | MS.gene57183:CDS |
| AACAGCTTGTTGTATAGTTC+TGG | 0.368091 | 5.3:+9067164 | None:intergenic |
| GTTTCAAAGGAACAAATAAT+GGG | 0.368092 | 5.3:-9066586 | MS.gene57183:CDS |
| TCTGAAAAGGTTGTCGTTGT+TGG | 0.368268 | 5.3:-9069064 | MS.gene57183:CDS |
| GCTCTGGTGATAGTGATAAA+TGG | 0.371973 | 5.3:-9065699 | MS.gene57183:CDS |
| ACGTAACGGAGCTTGAAATA+AGG | 0.375796 | 5.3:+9065577 | None:intergenic |
| TAGCGCAATGGTGGACTCTA+TGG | 0.377756 | 5.3:+9067023 | None:intergenic |
| CAGTACCTTCAGGAGAAGTA+TGG | 0.378008 | 5.3:-9066901 | MS.gene57183:CDS |
| ATCCTGTATATATGGGGTAT+TGG | 0.391603 | 5.3:-9066862 | MS.gene57183:CDS |
| CTTGCTTTGTTTGGTTTCAA+AGG | 0.392387 | 5.3:-9066599 | MS.gene57183:CDS |
| CTTATGTGGGCTACAGCTAT+GGG | 0.394453 | 5.3:-9068854 | MS.gene57183:CDS |
| TGTTGCTACGGGGAGACATT+TGG | 0.399325 | 5.3:-9068798 | MS.gene57183:CDS |
| ATGACTGAAGTTGCTTTGAT+TGG | 0.400536 | 5.3:-9068722 | MS.gene57183:CDS |
| CGCTTACGATTCATCTGAAA+AGG | 0.410529 | 5.3:-9069077 | MS.gene57183:CDS |
| TTTCAATACAGACCATTTCC+TGG | 0.412146 | 5.3:-9065731 | MS.gene57183:intron |
| TCTTATGTGGGCTACAGCTA+TGG | 0.412271 | 5.3:-9068855 | MS.gene57183:CDS |
| CAACAAGCTGTTGGAGTTGT+TGG | 0.415507 | 5.3:-9067153 | MS.gene57183:CDS |
| GGCCTTGTTCCTCTTTGGGC+TGG | 0.416642 | 5.3:-9068644 | MS.gene57183:CDS |
| ATGGTACTGAAATAGCAAAT+AGG | 0.419910 | 5.3:-9066945 | MS.gene57183:CDS |
| ATAATGGGCACTTTCAAGAT+TGG | 0.421189 | 5.3:-9066571 | MS.gene57183:CDS |
| AGCAAGGGAATCAATGCAAA+AGG | 0.422846 | 5.3:+9066616 | None:intergenic |
| ATTCCCAATCCTGTATATAT+GGG | 0.424368 | 5.3:-9066869 | MS.gene57183:CDS |
| ATAGTTCTGGAGCTAAGTTT+AGG | 0.430966 | 5.3:+9067177 | None:intergenic |
| GATGGTGTTGATGTTCTTGT+TGG | 0.436854 | 5.3:-9067340 | MS.gene57183:intron |
| TTCGTAGGCTTCTTCTTCGT+CGG | 0.440294 | 5.3:+9069039 | None:intergenic |
| TGCTCTTGTTCAATCCAGGC+AGG | 0.441118 | 5.3:-9067094 | MS.gene57183:CDS |
| TACCCCATATATACAGGATT+GGG | 0.442489 | 5.3:+9066866 | None:intergenic |
| AAATGCAGGGCAGTACCTTC+AGG | 0.445908 | 5.3:-9066911 | MS.gene57183:CDS |
| CATAGTTTCTTCCATGAAAA+CGG | 0.452161 | 5.3:+9068986 | None:intergenic |
| TTGTCATTACTGCTTTAGAT+TGG | 0.452490 | 5.3:-9068619 | MS.gene57183:intron |
| AGCAGCCACAAGCCAGGAAA+TGG | 0.465152 | 5.3:+9065719 | None:intergenic |
| GGTCAGAGTAGCACTATTAC+TGG | 0.465242 | 5.3:-9066826 | MS.gene57183:CDS |
| GCAAGGTTAGGTGTTGCTAC+GGG | 0.467938 | 5.3:-9068809 | MS.gene57183:CDS |
| GGATGAGGGCGTTGATTACT+CGG | 0.472145 | 5.3:-9066747 | MS.gene57183:CDS |
| GCTGTTATGGCTTCTTATGT+GGG | 0.476897 | 5.3:-9068867 | MS.gene57183:CDS |
| CACCATAATTCTCAAGAAAG+AGG | 0.481932 | 5.3:+9067446 | None:intergenic |
| ATTCTGCTCTTGTTCAATCC+AGG | 0.482576 | 5.3:-9067098 | MS.gene57183:CDS |
| CTATGGTTATTCAGTGGACC+AGG | 0.490109 | 5.3:-9068968 | MS.gene57183:CDS |
| TGTCACAACTGTGTTTGCTA+AGG | 0.491481 | 5.3:-9066974 | MS.gene57183:CDS |
| ACCCAATACCCCATATATAC+AGG | 0.494023 | 5.3:+9066860 | None:intergenic |
| TACGAAGCTGACGTGGACTC+TGG | 0.498286 | 5.3:-9069022 | MS.gene57183:CDS |
| ACAAGAACATCAACACCATC+TGG | 0.500462 | 5.3:+9067343 | None:intergenic |
| GTCACAACTGTGTTTGCTAA+GGG | 0.500490 | 5.3:-9066973 | MS.gene57183:CDS |
| TTGGAAGGAGATCTTCAATC+TGG | 0.500957 | 5.3:-9068908 | MS.gene57183:CDS |
| AGCAAGGTTAGGTGTTGCTA+CGG | 0.506542 | 5.3:-9068810 | MS.gene57183:CDS |
| TTCAATCTGGTGCAATTGCT+GGG | 0.512314 | 5.3:-9068895 | MS.gene57183:CDS |
| ATACCCCATATATACAGGAT+TGG | 0.515369 | 5.3:+9066865 | None:intergenic |
| GTTGTTCTAACAGAGGTTGT+TGG | 0.516654 | 5.3:+9069122 | None:intergenic |
| TTGGATCCTGGAAACTTGGA+AGG | 0.517550 | 5.3:-9068923 | MS.gene57183:CDS |
| AGGATCGGTCTTGTAAATGC+AGG | 0.518450 | 5.3:-9066925 | MS.gene57183:CDS |
| ACTATTACTGGTACATATGC+TGG | 0.527712 | 5.3:-9066814 | MS.gene57183:CDS |
| GTAGAGATGAGTATCCTACT+TGG | 0.535483 | 5.3:-9068766 | MS.gene57183:CDS |
| CAAGATTGGCTCTGTCCTCA+AGG | 0.536538 | 5.3:-9066557 | MS.gene57183:intron |
| ATAAGTGCAACTATCATAGT+CGG | 0.536590 | 5.3:+9066709 | None:intergenic |
| AGAGTCCACGTCAGCTTCGT+AGG | 0.542462 | 5.3:+9069024 | None:intergenic |
| TAATGGCTCTCTCATTTGCA+TGG | 0.545987 | 5.3:-9067384 | MS.gene57183:CDS |
| TAAGTGCAACTATCATAGTC+GGG | 0.551179 | 5.3:+9066710 | None:intergenic |
| GATCGAGTTAATCTTTGCCA+AGG | 0.551708 | 5.3:+9065549 | None:intergenic |
| ACAGACCATTTCCTGGCTTG+TGG | 0.551762 | 5.3:-9065724 | MS.gene57183:intron |
| GCTATACTCATCAGAAAACC+TGG | 0.552760 | 5.3:+9068950 | None:intergenic |
| TCTTGTTGTTGTTCTAACAG+AGG | 0.555158 | 5.3:+9069115 | None:intergenic |
| CTTTGAAACCAAACAAAGCA+AGG | 0.557493 | 5.3:+9066600 | None:intergenic |
| TTAGAACAACAACAAGAAGA+AGG | 0.558025 | 5.3:-9069109 | MS.gene57183:CDS |
| GGTATTGGGTTACTAGCAGC+TGG | 0.560371 | 5.3:-9066847 | MS.gene57183:CDS |
| CACCAGAGCAGCCACAAGCC+AGG | 0.561920 | 5.3:+9065713 | None:intergenic |
| AGAACTATACAACAAGCTGT+TGG | 0.566192 | 5.3:-9067162 | MS.gene57183:CDS |
| CACTGCTCCACTCACTTCAG+AGG | 0.566376 | 5.3:+9065653 | None:intergenic |
| GCAAGGGAATCAATGCAAAA+GGG | 0.569154 | 5.3:+9066617 | None:intergenic |
| TTCTTGAGAATTATGGTGTG+AGG | 0.571214 | 5.3:-9067441 | MS.gene57183:CDS |
| TAGAGATGAGTATCCTACTT+GGG | 0.572208 | 5.3:-9068765 | MS.gene57183:CDS |
| AGAACAATCCTTGCCCAAGT+AGG | 0.575207 | 5.3:+9068752 | None:intergenic |
| TTTGAAACCAAACAAAGCAA+GGG | 0.595987 | 5.3:+9066601 | None:intergenic |
| GGAGACAACTAGCGCAATGG+TGG | 0.598232 | 5.3:+9067014 | None:intergenic |
| CGCCTCCATACTTCTCCTGA+AGG | 0.601191 | 5.3:+9066896 | None:intergenic |
| CACCAGCCCAAAGAGGAACA+AGG | 0.602260 | 5.3:+9068642 | None:intergenic |
| ACTTATATTTGATTCTTCAG+AGG | 0.602962 | 5.3:-9066692 | MS.gene57183:CDS |
| ATGAGTATCCTACTTGGGCA+AGG | 0.603524 | 5.3:-9068760 | MS.gene57183:CDS |
| ATATGCTGGACAATTCATCA+TGG | 0.605595 | 5.3:-9066800 | MS.gene57183:CDS |
| GATTGGTTCTGATATTCAAG+AGG | 0.612261 | 5.3:-9068705 | MS.gene57183:CDS |
| TTATGTGGGCTACAGCTATG+GGG | 0.620688 | 5.3:-9068853 | MS.gene57183:CDS |
| CAGAGGTTGTTGGTGAGACA+TGG | 0.620954 | 5.3:+9069132 | None:intergenic |
| AGAAGCCTACGAAGCTGACG+TGG | 0.623584 | 5.3:-9069029 | MS.gene57183:CDS |
| GGATCGGTCTTGTAAATGCA+GGG | 0.624462 | 5.3:-9066924 | MS.gene57183:CDS |
| AGCCATTATAGCAATAAGAA+CGG | 0.624673 | 5.3:+9067399 | None:intergenic |
| CTTCAGGAGAAGTATGGAGG+CGG | 0.626449 | 5.3:-9066895 | MS.gene57183:CDS |
| GCTGGACAATTCATCATGGG+TGG | 0.626939 | 5.3:-9066796 | MS.gene57183:CDS |
| TATGCTGGACAATTCATCAT+GGG | 0.627133 | 5.3:-9066799 | MS.gene57183:CDS |
| ATGACAACACCAGCCCAAAG+AGG | 0.629953 | 5.3:+9068635 | None:intergenic |
| AATTGAGAGCTTCTTGAACG+CGG | 0.634426 | 5.3:+9067052 | None:intergenic |
| ACTGAAATAGCAAATAGGAT+CGG | 0.636009 | 5.3:-9066940 | MS.gene57183:CDS |
| AAAGGAGACAACTAGCGCAA+TGG | 0.641305 | 5.3:+9067011 | None:intergenic |
| AAGAAACTATGGTTATTCAG+TGG | 0.641832 | 5.3:-9068974 | MS.gene57183:CDS |
| TTCCCAATCCTGTATATATG+GGG | 0.642639 | 5.3:-9066868 | MS.gene57183:CDS |
| TACCTTCAGGAGAAGTATGG+AGG | 0.648168 | 5.3:-9066898 | MS.gene57183:CDS |
| AGTTTCTTCCATGAAAACGG+TGG | 0.652794 | 5.3:+9068989 | None:intergenic |
| TTGCCAAGGTGAAAACGTAA+CGG | 0.654921 | 5.3:+9065563 | None:intergenic |
| GAATGCAAGAATACATTGTG+AGG | 0.660682 | 5.3:+9067117 | None:intergenic |
| CAAGGTTAGGTGTTGCTACG+GGG | 0.666495 | 5.3:-9068808 | MS.gene57183:CDS |
| TTTGGTGAAGCAAAGCCAGA+TGG | 0.673749 | 5.3:-9067358 | MS.gene57183:CDS |
| GGCTGCTCAACTCTCCGTGG+TGG | 0.674172 | 5.3:+9065515 | None:intergenic |
| TGTGGCTGCTCAACTCTCCG+TGG | 0.704473 | 5.3:+9065512 | None:intergenic |
| ATCAAAGACAGTTACCACCA+CGG | 0.705378 | 5.3:-9065529 | MS.gene57183:CDS |
| TGTTGTGTGCGTAATAACAG+CGG | 0.729452 | 5.3:-9065622 | MS.gene57183:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GACAAATATATTAATAATAA+AGG | + | chr5.3:9067661-9067680 | None:intergenic | 10.0% |
| !! | TAAATTTCATTTACTTTAAA+TGG | - | chr5.3:9066055-9066074 | MS.gene57183:intron | 10.0% |
| !!! | AAATTATCTTATTATTGTTT+TGG | - | chr5.3:9066320-9066339 | MS.gene57183:intron | 10.0% |
| !!! | ATTTGAAATTCAAATTAATA+TGG | + | chr5.3:9066903-9066922 | None:intergenic | 10.0% |
| !!! | TTAAATATTTAACTTTTATG+TGG | - | chr5.3:9067159-9067178 | MS.gene57183:CDS | 10.0% |
| !!! | TTTTTTACAAATTTCAGTTT+CGG | - | chr5.3:9066086-9066105 | MS.gene57183:intron | 15.0% |
| !! | AACCAAAAAAAAAAGAAACT+CGG | + | chr5.3:9066183-9066202 | None:intergenic | 20.0% |
| !! | TTAATTGAATCAATTCATGA+AGG | + | chr5.3:9066830-9066849 | None:intergenic | 20.0% |
| !! | TTGATAAAAATATTAACGAG+GGG | + | chr5.3:9068776-9068795 | None:intergenic | 20.0% |
| !! | TTTCTTGATATTATTACAGT+GGG | - | chr5.3:9066351-9066370 | MS.gene57183:intron | 20.0% |
| !!! | AGTTTCTTTTTTTTTTGGTT+TGG | - | chr5.3:9066183-9066202 | MS.gene57183:intron | 20.0% |
| !!! | GTTGATAAAAATATTAACGA+GGG | + | chr5.3:9068777-9068796 | None:intergenic | 20.0% |
| !!! | TCTTATTATTGTTTTGGAAT+TGG | - | chr5.3:9066326-9066345 | MS.gene57183:intron | 20.0% |
| !!! | TGAATTTGAAGTTGAAAAAA+TGG | - | chr5.3:9067883-9067902 | MS.gene57183:intron | 20.0% |
| !!! | TTTTCTTGATATTATTACAG+TGG | - | chr5.3:9066350-9066369 | MS.gene57183:intron | 20.0% |
| ! | ACCAAAAAAAAAAGAAACTC+GGG | + | chr5.3:9066182-9066201 | None:intergenic | 25.0% |
| ! | ACTTATATTTGATTCTTCAG+AGG | - | chr5.3:9067959-9067978 | MS.gene57183:intron | 25.0% |
| ! | CATTATTAAGTCAATTTCCT+AGG | - | chr5.3:9067384-9067403 | MS.gene57183:CDS | 25.0% |
| ! | CTTTCTTAGATTCATTTCTT+TGG | - | chr5.3:9066950-9066969 | MS.gene57183:CDS | 25.0% |
| ! | GACATATATGAATATGCAAA+TGG | + | chr5.3:9068195-9068214 | None:intergenic | 25.0% |
| ! | GTCTCATATTGAATGATATA+AGG | + | chr5.3:9068328-9068347 | None:intergenic | 25.0% |
| ! | GTTTCAAAGGAACAAATAAT+GGG | - | chr5.3:9068065-9068084 | MS.gene57183:intron | 25.0% |
| ! | TAACTTCAATTTGTGCATAT+GGG | - | chr5.3:9066647-9066666 | MS.gene57183:CDS | 25.0% |
| ! | TGATAAAAATATTAACGAGG+GGG | + | chr5.3:9068775-9068794 | None:intergenic | 25.0% |
| !! | ATGAAGGAATGTAACTTTTT+GGG | + | chr5.3:9066814-9066833 | None:intergenic | 25.0% |
| !! | CGTTGATAAAAATATTAACG+AGG | + | chr5.3:9068778-9068797 | None:intergenic | 25.0% |
| !! | TATATGATTCCTTTGCATTT+TGG | - | chr5.3:9068117-9068136 | MS.gene57183:intron | 25.0% |
| !! | TCTGAAATTGTGTTTATGAA+TGG | + | chr5.3:9068305-9068324 | None:intergenic | 25.0% |
| !!! | AGTGTTTTTTAGTTGTACTA+TGG | - | chr5.3:9066378-9066397 | MS.gene57183:intron | 25.0% |
| !!! | AGTTTGATGCTTTGATTTTT+TGG | - | chr5.3:9068859-9068878 | MS.gene57183:CDS | 25.0% |
| !!! | CATTAGATGTTTTGAATGAA+TGG | - | chr5.3:9067985-9068004 | MS.gene57183:intron | 25.0% |
| !!! | CGTTAATATTTTTATCAACG+TGG | - | chr5.3:9068778-9068797 | MS.gene57183:CDS | 25.0% |
| AAAAGCAAGACAATTGATCA+TGG | + | chr5.3:9067070-9067089 | None:intergenic | 30.0% | |
| AAGAAACTATGGTTATTCAG+TGG | - | chr5.3:9065677-9065696 | MS.gene57183:CDS | 30.0% | |
| AAGAAAGAGGAAAATGAAAC+TGG | + | chr5.3:9067195-9067214 | None:intergenic | 30.0% | |
| AAGATGGAATAGGTCTATAT+TGG | + | chr5.3:9068592-9068611 | None:intergenic | 30.0% | |
| ACTCGTATATTACTTGATGA+AGG | - | chr5.3:9066778-9066797 | MS.gene57183:CDS | 30.0% | |
| ACTGAAATAGCAAATAGGAT+CGG | - | chr5.3:9067711-9067730 | MS.gene57183:intron | 30.0% | |
| AGAACAACTCTACATTCAAA+AGG | + | chr5.3:9066746-9066765 | None:intergenic | 30.0% | |
| AGATGGAATAGGTCTATATT+GGG | + | chr5.3:9068591-9068610 | None:intergenic | 30.0% | |
| AGCCATTATAGCAATAAGAA+CGG | + | chr5.3:9067255-9067274 | None:intergenic | 30.0% | |
| ATAAGTGCAACTATCATAGT+CGG | + | chr5.3:9067945-9067964 | None:intergenic | 30.0% | |
| ATGTAAAGAGTCGTAACATT+TGG | - | chr5.3:9068226-9068245 | MS.gene57183:intron | 30.0% | |
| ATTCCCAATCCTGTATATAT+GGG | - | chr5.3:9067782-9067801 | MS.gene57183:intron | 30.0% | |
| CATAGTTTCTTCCATGAAAA+CGG | + | chr5.3:9065668-9065687 | None:intergenic | 30.0% | |
| CATATGCACAAATTGAAGTT+AGG | + | chr5.3:9066648-9066667 | None:intergenic | 30.0% | |
| CATGGTTTCATCAATATTTC+TGG | + | chr5.3:9067052-9067071 | None:intergenic | 30.0% | |
| CCAAAAAAAAAAGAAACTCG+GGG | + | chr5.3:9066181-9066200 | None:intergenic | 30.0% | |
| CCACTACCATGTTAAAATTT+GGG | - | chr5.3:9068446-9068465 | MS.gene57183:intron | 30.0% | |
| CGATGTATCTTCTTTGATTA+AGG | - | chr5.3:9066283-9066302 | MS.gene57183:intron | 30.0% | |
| CTAACTTCAATTTGTGCATA+TGG | - | chr5.3:9066646-9066665 | MS.gene57183:CDS | 30.0% | |
| CTCGTATATTACTTGATGAA+GGG | - | chr5.3:9066779-9066798 | MS.gene57183:CDS | 30.0% | |
| CTGATATTCAAGAGGTTATA+GGG | - | chr5.3:9065954-9065973 | MS.gene57183:intron | 30.0% | |
| GAAATTGTGTTTATGAATGG+TGG | + | chr5.3:9068302-9068321 | None:intergenic | 30.0% | |
| GAAGTTGAAAAAATGGATGA+GGG | - | chr5.3:9067890-9067909 | MS.gene57183:intron | 30.0% | |
| GATAATTTCTCTTACCTAAG+TGG | - | chr5.3:9068680-9068699 | MS.gene57183:CDS | 30.0% | |
| GGTTTCAAAGGAACAAATAA+TGG | - | chr5.3:9068064-9068083 | MS.gene57183:intron | 30.0% | |
| GTCCCACATTTGATTAAATA+AGG | + | chr5.3:9068540-9068559 | None:intergenic | 30.0% | |
| GTTATCCATTGTCAGTTTAT+TGG | - | chr5.3:9068157-9068176 | MS.gene57183:intron | 30.0% | |
| TATTCCCAATCCTGTATATA+TGG | - | chr5.3:9067781-9067800 | MS.gene57183:intron | 30.0% | |
| TCCACTACCATGTTAAAATT+TGG | - | chr5.3:9068445-9068464 | MS.gene57183:intron | 30.0% | |
| TCTGATATTCAAGAGGTTAT+AGG | - | chr5.3:9065953-9065972 | MS.gene57183:intron | 30.0% | |
| TGAAGTTGAAAAAATGGATG+AGG | - | chr5.3:9067889-9067908 | MS.gene57183:intron | 30.0% | |
| TGGTCTGTATTGAAATCATA+AGG | + | chr5.3:9068915-9068934 | None:intergenic | 30.0% | |
| TGTAAAGAGTCGTAACATTT+GGG | - | chr5.3:9068227-9068246 | MS.gene57183:intron | 30.0% | |
| TTAGAACAACAACAAGAAGA+AGG | - | chr5.3:9065542-9065561 | MS.gene57183:CDS | 30.0% | |
| TTCCTCTTTCTTGAGAATTA+TGG | - | chr5.3:9067203-9067222 | MS.gene57183:intron | 30.0% | |
| TTTGGCATTTAAGAAGCTAT+TGG | - | chr5.3:9067094-9067113 | MS.gene57183:CDS | 30.0% | |
| ! | ACCATGTTAAAATTTGGGTT+TGG | - | chr5.3:9068451-9068470 | MS.gene57183:intron | 30.0% |
| ! | ATCAAGTTTAGAACCTAAAC+TGG | + | chr5.3:9066511-9066530 | None:intergenic | 30.0% |
| ! | ATGGTACTGAAATAGCAAAT+AGG | - | chr5.3:9067706-9067725 | MS.gene57183:intron | 30.0% |
| ! | CATGAAGGAATGTAACTTTT+TGG | + | chr5.3:9066815-9066834 | None:intergenic | 30.0% |
| ! | CGGTAAGTTTCATTTAAAGT+AGG | - | chr5.3:9066106-9066125 | MS.gene57183:intron | 30.0% |
| ! | TAGAGTTTCTTGTTATGGAT+TGG | - | chr5.3:9066559-9066578 | MS.gene57183:CDS | 30.0% |
| ! | TCTGATGAGTATAGCATTTT+TGG | - | chr5.3:9065709-9065728 | MS.gene57183:CDS | 30.0% |
| ! | TTGTCATTACTGCTTTAGAT+TGG | - | chr5.3:9066032-9066051 | MS.gene57183:intron | 30.0% |
| ! | TTTGAAACCAAACAAAGCAA+GGG | + | chr5.3:9068053-9068072 | None:intergenic | 30.0% |
| ! | TTTTGCCTTTGTAGGTATTT+TGG | - | chr5.3:9067449-9067468 | MS.gene57183:CDS | 30.0% |
| !! | ATCTAAGAAAGCACTCTAAA+AGG | + | chr5.3:9066941-9066960 | None:intergenic | 30.0% |
| !! | ATTTTTATCAACGTGGATTG+AGG | - | chr5.3:9068785-9068804 | MS.gene57183:CDS | 30.0% |
| !! | GCTATTAGGATTTTGAGTAA+TGG | - | chr5.3:9065986-9066005 | MS.gene57183:intron | 30.0% |
| !! | GGCCTTATTTAATCAAATGT+GGG | - | chr5.3:9068535-9068554 | MS.gene57183:intron | 30.0% |
| !! | GTCTTTAGAGTTTCTTGTTA+TGG | - | chr5.3:9066554-9066573 | MS.gene57183:intron | 30.0% |
| !! | TTTTAGTTGTACTATGGAGA+TGG | - | chr5.3:9066384-9066403 | MS.gene57183:intron | 30.0% |
| !!! | ACTGAACCATATGTTTTGAT+AGG | + | chr5.3:9066596-9066615 | None:intergenic | 30.0% |
| !!! | ATTGTCTTGCTTTTTCGTTT+TGG | - | chr5.3:9067076-9067095 | MS.gene57183:CDS | 30.0% |
| !!! | CTGAACCATATGTTTTGATA+GGG | + | chr5.3:9066595-9066614 | None:intergenic | 30.0% |
| !!! | TGAACCATATGTTTTGATAG+GGG | + | chr5.3:9066594-9066613 | None:intergenic | 30.0% |
| AAAAATATTAACGAGGGGGT+AGG | + | chr5.3:9068771-9068790 | None:intergenic | 35.0% | |
| AAAATATTAACGAGGGGGTA+GGG | + | chr5.3:9068770-9068789 | None:intergenic | 35.0% | |
| ACATCCCCTATCAAAACATA+TGG | - | chr5.3:9066587-9066606 | MS.gene57183:CDS | 35.0% | |
| ACTATTACTGGTACATATGC+TGG | - | chr5.3:9067837-9067856 | MS.gene57183:intron | 35.0% | |
| AGAACTATACAACAAGCTGT+TGG | - | chr5.3:9067489-9067508 | MS.gene57183:intron | 35.0% | |
| AGGAAAATGAAACTGGAACA+AGG | + | chr5.3:9067188-9067207 | None:intergenic | 35.0% | |
| AGGAACCAAAATACCTACAA+AGG | + | chr5.3:9067457-9067476 | None:intergenic | 35.0% | |
| ATACCCCATATATACAGGAT+TGG | + | chr5.3:9067789-9067808 | None:intergenic | 35.0% | |
| ATATGCTGGACAATTCATCA+TGG | - | chr5.3:9067851-9067870 | MS.gene57183:intron | 35.0% | |
| ATCCTGTATATATGGGGTAT+TGG | - | chr5.3:9067789-9067808 | MS.gene57183:intron | 35.0% | |
| CAAAGGAATCATATACCTTG+AGG | + | chr5.3:9068112-9068131 | None:intergenic | 35.0% | |
| CACCATAATTCTCAAGAAAG+AGG | + | chr5.3:9067208-9067227 | None:intergenic | 35.0% | |
| CATGTCCAATAAACTGACAA+TGG | + | chr5.3:9068165-9068184 | None:intergenic | 35.0% | |
| CTAAACTTGATGTAAGAGGA+GGG | - | chr5.3:9066520-9066539 | MS.gene57183:intron | 35.0% | |
| GAATGCAAGAATACATTGTG+AGG | + | chr5.3:9067537-9067556 | None:intergenic | 35.0% | |
| GAATTATGGTGTGAGGAAAT+TGG | - | chr5.3:9067217-9067236 | MS.gene57183:intron | 35.0% | |
| TAAGTGCAACTATCATAGTC+GGG | + | chr5.3:9067944-9067963 | None:intergenic | 35.0% | |
| TACCCCATATATACAGGATT+GGG | + | chr5.3:9067788-9067807 | None:intergenic | 35.0% | |
| TAGAGATGAGTATCCTACTT+GGG | - | chr5.3:9065886-9065905 | MS.gene57183:intron | 35.0% | |
| TATGCTGGACAATTCATCAT+GGG | - | chr5.3:9067852-9067871 | MS.gene57183:intron | 35.0% | |
| TCTAAACTTGATGTAAGAGG+AGG | - | chr5.3:9066519-9066538 | MS.gene57183:intron | 35.0% | |
| TGCCGTTCTTATTGCTATAA+TGG | - | chr5.3:9067250-9067269 | MS.gene57183:intron | 35.0% | |
| TTCCCAATCCTGTATATATG+GGG | - | chr5.3:9067783-9067802 | MS.gene57183:intron | 35.0% | |
| TTCTTGAGAATTATGGTGTG+AGG | - | chr5.3:9067210-9067229 | MS.gene57183:intron | 35.0% | |
| TTTCAATACAGACCATTTCC+TGG | - | chr5.3:9068920-9068939 | MS.gene57183:CDS | 35.0% | |
| ! | AGTTTAGAACCTAAACTGGT+AGG | + | chr5.3:9066507-9066526 | None:intergenic | 35.0% |
| ! | ATGACTGAAGTTGCTTTGAT+TGG | - | chr5.3:9065929-9065948 | MS.gene57183:intron | 35.0% |
| ! | ATTGATTCCCTTGCTTTGTT+TGG | - | chr5.3:9068043-9068062 | MS.gene57183:intron | 35.0% |
| ! | CGTTTTCATGGAAGAAACTA+TGG | - | chr5.3:9065666-9065685 | MS.gene57183:CDS | 35.0% |
| ! | CTAAAAGGTGTGTTTCTTCA+TGG | + | chr5.3:9066926-9066945 | None:intergenic | 35.0% |
| ! | CTTTTCAGATGAATCGTAAG+CGG | + | chr5.3:9065576-9065595 | None:intergenic | 35.0% |
| ! | GATAAATGGCTATCTTTTGC+TGG | - | chr5.3:9068966-9068985 | MS.gene57183:CDS | 35.0% |
| ! | GTGTAGAGACACTAAGTTTT+AGG | - | chr5.3:9066470-9066489 | MS.gene57183:intron | 35.0% |
| ! | GTTTAGAACCTAAACTGGTA+GGG | + | chr5.3:9066506-9066525 | None:intergenic | 35.0% |
| ! | TAAGAATTCCACCGTTTTCA+TGG | - | chr5.3:9065654-9065673 | MS.gene57183:CDS | 35.0% |
| ! | TCCTGTATATATGGGGTATT+GGG | - | chr5.3:9067790-9067809 | MS.gene57183:intron | 35.0% |
| ! | TGCTTTCATTTTGCCTTTGT+AGG | - | chr5.3:9067441-9067460 | MS.gene57183:CDS | 35.0% |
| !! | AACAGCTTGTTGTATAGTTC+TGG | + | chr5.3:9067490-9067509 | None:intergenic | 35.0% |
| !! | AGTATAGCATTTTTGGATCC+TGG | - | chr5.3:9065716-9065735 | MS.gene57183:CDS | 35.0% |
| !! | ATAATGGGCACTTTCAAGAT+TGG | - | chr5.3:9068080-9068099 | MS.gene57183:intron | 35.0% |
| !! | ATAGTTCTGGAGCTAAGTTT+AGG | + | chr5.3:9067477-9067496 | None:intergenic | 35.0% |
| !! | ATTTTTGGATCCTGGAAACT+TGG | - | chr5.3:9065724-9065743 | MS.gene57183:intron | 35.0% |
| !! | CCCAAATTTTAACATGGTAG+TGG | + | chr5.3:9068449-9068468 | None:intergenic | 35.0% |
| !! | CTTGCTTTGTTTGGTTTCAA+AGG | - | chr5.3:9068052-9068071 | MS.gene57183:intron | 35.0% |
| !! | CTTTGAAACCAAACAAAGCA+AGG | + | chr5.3:9068054-9068073 | None:intergenic | 35.0% |
| !! | GATTGGTTCTGATATTCAAG+AGG | - | chr5.3:9065946-9065965 | MS.gene57183:intron | 35.0% |
| !! | GCCAAACCCAAATTTTAACA+TGG | + | chr5.3:9068455-9068474 | None:intergenic | 35.0% |
| !! | GGGCCTTATTTAATCAAATG+TGG | - | chr5.3:9068534-9068553 | MS.gene57183:intron | 35.0% |
| !! | GGTTCTAAACTTGATGTAAG+AGG | - | chr5.3:9066516-9066535 | MS.gene57183:intron | 35.0% |
| !! | TACCAAAGAGACTAGTTTCA+AGG | - | chr5.3:9068730-9068749 | MS.gene57183:CDS | 35.0% |
| !! | TCTTGTTGTTGTTCTAACAG+AGG | + | chr5.3:9065539-9065558 | None:intergenic | 35.0% |
| !!! | ACTAAGTTTTAGGTTCCACA+TGG | - | chr5.3:9066480-9066499 | MS.gene57183:intron | 35.0% |
| !!! | CCCCGAGTTTCTTTTTTTTT+TGG | - | chr5.3:9066178-9066197 | MS.gene57183:intron | 35.0% |
| !!! | CTTACAAGCCACTTTTGTAA+GGG | + | chr5.3:9068268-9068287 | None:intergenic | 35.0% |
| !!! | TAACCGTTTTTGAGTTTGCA+GGG | + | chr5.3:9066216-9066235 | None:intergenic | 35.0% |
| AATGTCCACCACTCACATTT+CGG | - | chr5.3:9068513-9068532 | MS.gene57183:intron | 40.0% | |
| AATTGAGAGCTTCTTGAACG+CGG | + | chr5.3:9067602-9067621 | None:intergenic | 40.0% | |
| ACAAGAACATCAACACCATC+TGG | + | chr5.3:9067311-9067330 | None:intergenic | 40.0% | |
| ACCCAATACCCCATATATAC+AGG | + | chr5.3:9067794-9067813 | None:intergenic | 40.0% | |
| AGATGTCACGTAAACCTGTT+GGG | - | chr5.3:9066986-9067005 | MS.gene57183:CDS | 40.0% | |
| AGCAAGGGAATCAATGCAAA+AGG | + | chr5.3:9068038-9068057 | None:intergenic | 40.0% | |
| AGTTTCTTCCATGAAAACGG+TGG | + | chr5.3:9065665-9065684 | None:intergenic | 40.0% | |
| AGTTTGGTAGGGGTTGAATT+GGG | + | chr5.3:9068477-9068496 | None:intergenic | 40.0% | |
| ATCAAAGACAGTTACCACCA+CGG | - | chr5.3:9069122-9069141 | MS.gene57183:CDS | 40.0% | |
| ATCAAGCTTGAGAAGCAAGA+TGG | + | chr5.3:9068608-9068627 | None:intergenic | 40.0% | |
| ATCCAAGATCCATTGGAGAT+TGG | + | chr5.3:9068421-9068440 | None:intergenic | 40.0% | |
| ATTCTGCTCTTGTTCAATCC+AGG | - | chr5.3:9067553-9067572 | MS.gene57183:intron | 40.0% | |
| CAAATGTGGGACTCTTAACT+AGG | - | chr5.3:9068548-9068567 | MS.gene57183:intron | 40.0% | |
| CATAAGGATATCATGAGCTG+TGG | + | chr5.3:9068899-9068918 | None:intergenic | 40.0% | |
| CATCGAAATAACGCCATAAG+TGG | + | chr5.3:9066268-9066287 | None:intergenic | 40.0% | |
| CGCTTACGATTCATCTGAAA+AGG | - | chr5.3:9065574-9065593 | MS.gene57183:CDS | 40.0% | |
| CTCTCATTTGCATGGATGTT+TGG | - | chr5.3:9067275-9067294 | MS.gene57183:intron | 40.0% | |
| CTTGAGAAGCAAGATGGAAT+AGG | + | chr5.3:9068602-9068621 | None:intergenic | 40.0% | |
| GATCGAGTTAATCTTTGCCA+AGG | + | chr5.3:9069105-9069124 | None:intergenic | 40.0% | |
| GCAAGGGAATCAATGCAAAA+GGG | + | chr5.3:9068037-9068056 | None:intergenic | 40.0% | |
| GCAGTTCAACCAAAATGCAA+AGG | + | chr5.3:9068129-9068148 | None:intergenic | 40.0% | |
| GCTATACTCATCAGAAAACC+TGG | + | chr5.3:9065704-9065723 | None:intergenic | 40.0% | |
| GCTGTTATGGCTTCTTATGT+GGG | - | chr5.3:9065784-9065803 | MS.gene57183:intron | 40.0% | |
| GGAATCTATCCAAGATCCAT+TGG | + | chr5.3:9068428-9068447 | None:intergenic | 40.0% | |
| GTAGAGATGAGTATCCTACT+TGG | - | chr5.3:9065885-9065904 | MS.gene57183:intron | 40.0% | |
| GTTGTTCTAACAGAGGTTGT+TGG | + | chr5.3:9065532-9065551 | None:intergenic | 40.0% | |
| GTTGTTGAACTTAGCCACTT+AGG | + | chr5.3:9068697-9068716 | None:intergenic | 40.0% | |
| TAATGGCTCTCTCATTTGCA+TGG | - | chr5.3:9067267-9067286 | MS.gene57183:intron | 40.0% | |
| TAGATGTCACGTAAACCTGT+TGG | - | chr5.3:9066985-9067004 | MS.gene57183:CDS | 40.0% | |
| TAGCTCAACCCTTACAAAAG+TGG | - | chr5.3:9068257-9068276 | MS.gene57183:intron | 40.0% | |
| TCTGAAAAGGTTGTCGTTGT+TGG | - | chr5.3:9065587-9065606 | MS.gene57183:CDS | 40.0% | |
| TGACCCTGCAAACTCAAAAA+CGG | - | chr5.3:9066210-9066229 | MS.gene57183:intron | 40.0% | |
| TGGGAAGAGAAGACAACAAA+TGG | - | chr5.3:9066666-9066685 | MS.gene57183:CDS | 40.0% | |
| TGTTGTGTGCGTAATAACAG+CGG | - | chr5.3:9069029-9069048 | MS.gene57183:CDS | 40.0% | |
| TTACCCGAATAGCTTGATAG+CGG | - | chr5.3:9068390-9068409 | MS.gene57183:intron | 40.0% | |
| TTCAATCTGGTGCAATTGCT+GGG | - | chr5.3:9065756-9065775 | MS.gene57183:intron | 40.0% | |
| TTGCCAAGGTGAAAACGTAA+CGG | + | chr5.3:9069091-9069110 | None:intergenic | 40.0% | |
| TTGGAAGGAGATCTTCAATC+TGG | - | chr5.3:9065743-9065762 | MS.gene57183:intron | 40.0% | |
| ! | ACGTAACGGAGCTTGAAATA+AGG | + | chr5.3:9069077-9069096 | None:intergenic | 40.0% |
| ! | ACTTTTGTAAGGGTTGAGCT+AGG | + | chr5.3:9068258-9068277 | None:intergenic | 40.0% |
| ! | CCTTACAAAAGTGGCTTGTA+AGG | - | chr5.3:9068266-9068285 | MS.gene57183:intron | 40.0% |
| ! | GCTCTGGTGATAGTGATAAA+TGG | - | chr5.3:9068952-9068971 | MS.gene57183:CDS | 40.0% |
| ! | GTCACAACTGTGTTTGCTAA+GGG | - | chr5.3:9067678-9067697 | MS.gene57183:intron | 40.0% |
| ! | TGATTCAGCTTTTGTCAGCA+AGG | - | chr5.3:9065825-9065844 | MS.gene57183:intron | 40.0% |
| ! | TGTCACAACTGTGTTTGCTA+AGG | - | chr5.3:9067677-9067696 | MS.gene57183:intron | 40.0% |
| !! | GATGGTGTTGATGTTCTTGT+TGG | - | chr5.3:9067311-9067330 | MS.gene57183:intron | 40.0% |
| !! | GTGTTTGCTAAGGGCTTTTA+TGG | - | chr5.3:9067687-9067706 | MS.gene57183:intron | 40.0% |
| !! | TAATGGCCTTGTTCCTCTTT+GGG | - | chr5.3:9066003-9066022 | MS.gene57183:intron | 40.0% |
| !! | TAGGGAGTGCTATTGCTATT+AGG | - | chr5.3:9065972-9065991 | MS.gene57183:intron | 40.0% |
| !!! | CCTTACAAGCCACTTTTGTA+AGG | + | chr5.3:9068269-9068288 | None:intergenic | 40.0% |
| !!! | GTAACCGTTTTTGAGTTTGC+AGG | + | chr5.3:9066217-9066236 | None:intergenic | 40.0% |
| !!! | TTCTTTTCCTCTGAAGTGAG+TGG | - | chr5.3:9068991-9069010 | MS.gene57183:CDS | 40.0% |
| AAAGGAGACAACTAGCGCAA+TGG | + | chr5.3:9067643-9067662 | None:intergenic | 45.0% | |
| AATAAGGCCCGAAATGTGAG+TGG | + | chr5.3:9068524-9068543 | None:intergenic | 45.0% | |
| ACACCTCTCATGCTTAGTGT+TGG | - | chr5.3:9068355-9068374 | MS.gene57183:intron | 45.0% | |
| ACCTTACAAGCCAGTTTGGT+AGG | + | chr5.3:9068489-9068508 | None:intergenic | 45.0% | |
| AGAACAATCCTTGCCCAAGT+AGG | + | chr5.3:9065902-9065921 | None:intergenic | 45.0% | |
| AGATCTCCTTCCAAGTTTCC+AGG | + | chr5.3:9065737-9065756 | None:intergenic | 45.0% | |
| AGCCTCTGATGTCAGCTTAT+TGG | - | chr5.3:9066241-9066260 | MS.gene57183:intron | 45.0% | |
| ATGAGTATCCTACTTGGGCA+AGG | - | chr5.3:9065891-9065910 | MS.gene57183:intron | 45.0% | |
| ATGTCCACCACTCACATTTC+GGG | - | chr5.3:9068514-9068533 | MS.gene57183:intron | 45.0% | |
| CAACAAGCTGTTGGAGTTGT+TGG | - | chr5.3:9067498-9067517 | MS.gene57183:intron | 45.0% | |
| CAATTCAACCCCTACCAAAC+TGG | - | chr5.3:9068476-9068495 | MS.gene57183:intron | 45.0% | |
| CACGTAAACCTGTTGGGATT+GGG | - | chr5.3:9066992-9067011 | MS.gene57183:CDS | 45.0% | |
| CAGTACCTTCAGGAGAAGTA+TGG | - | chr5.3:9067750-9067769 | MS.gene57183:intron | 45.0% | |
| CAGTTTGGTAGGGGTTGAAT+TGG | + | chr5.3:9068478-9068497 | None:intergenic | 45.0% | |
| CCTTACAAGCCAGTTTGGTA+GGG | + | chr5.3:9068488-9068507 | None:intergenic | 45.0% | |
| CGCTGTTATGGCTTCTTATG+TGG | - | chr5.3:9065783-9065802 | MS.gene57183:intron | 45.0% | |
| CTATGGTTATTCAGTGGACC+AGG | - | chr5.3:9065683-9065702 | MS.gene57183:CDS | 45.0% | |
| CTTACAAGCCAGTTTGGTAG+GGG | + | chr5.3:9068487-9068506 | None:intergenic | 45.0% | |
| CTTCAATCTGGTGCAATTGC+TGG | - | chr5.3:9065755-9065774 | MS.gene57183:intron | 45.0% | |
| CTTGGGCAAGGATTGTTCTT+TGG | - | chr5.3:9065903-9065922 | MS.gene57183:intron | 45.0% | |
| GCCTCTGATGTCAGCTTATT+GGG | - | chr5.3:9066242-9066261 | MS.gene57183:intron | 45.0% | |
| GGGGTAGGGAACATAAAAAG+AGG | + | chr5.3:9068756-9068775 | None:intergenic | 45.0% | |
| GGTCAGAGTAGCACTATTAC+TGG | - | chr5.3:9067825-9067844 | MS.gene57183:intron | 45.0% | |
| GTATTCTTCCCAATCCCAAC+AGG | + | chr5.3:9067003-9067022 | None:intergenic | 45.0% | |
| GTCCAATCTCCAATGGATCT+TGG | - | chr5.3:9068416-9068435 | MS.gene57183:intron | 45.0% | |
| TATGAAGCATGAGCACACCT+AGG | + | chr5.3:9067404-9067423 | None:intergenic | 45.0% | |
| TCACGTAAACCTGTTGGGAT+TGG | - | chr5.3:9066991-9067010 | MS.gene57183:CDS | 45.0% | |
| TCAGCTTATTGGGCCACTTA+TGG | - | chr5.3:9066252-9066271 | MS.gene57183:intron | 45.0% | |
| TGTCCAACACTAAGCATGAG+AGG | + | chr5.3:9068361-9068380 | None:intergenic | 45.0% | |
| TTCGTAGGCTTCTTCTTCGT+CGG | + | chr5.3:9065615-9065634 | None:intergenic | 45.0% | |
| TTGCTGGGTATTCGCTGTTA+TGG | - | chr5.3:9065771-9065790 | MS.gene57183:intron | 45.0% | |
| TTGGATCCTGGAAACTTGGA+AGG | - | chr5.3:9065728-9065747 | MS.gene57183:intron | 45.0% | |
| TTGTACTATGGAGATGGACG+AGG | - | chr5.3:9066390-9066409 | MS.gene57183:intron | 45.0% | |
| TTTGGTGAAGCAAAGCCAGA+TGG | - | chr5.3:9067293-9067312 | MS.gene57183:intron | 45.0% | |
| ! | AGGATCGGTCTTGTAAATGC+AGG | - | chr5.3:9067726-9067745 | MS.gene57183:intron | 45.0% |
| ! | CAGCTTTTGTCAGCAAGGTT+AGG | - | chr5.3:9065830-9065849 | MS.gene57183:intron | 45.0% |
| ! | CAGGTTGACCCCAAAAAGAA+AGG | - | chr5.3:9067576-9067595 | MS.gene57183:intron | 45.0% |
| ! | CATGCTTAGTGTTGGACATC+TGG | - | chr5.3:9068363-9068382 | MS.gene57183:intron | 45.0% |
| ! | CTTATGTGGGCTACAGCTAT+GGG | - | chr5.3:9065797-9065816 | MS.gene57183:intron | 45.0% |
| ! | GGATCGGTCTTGTAAATGCA+GGG | - | chr5.3:9067727-9067746 | MS.gene57183:intron | 45.0% |
| ! | GGCCTTGAAACTAGTCTCTT+TGG | + | chr5.3:9068735-9068754 | None:intergenic | 45.0% |
| ! | TACCCGAATAGCTTGATAGC+GGG | - | chr5.3:9068391-9068410 | MS.gene57183:intron | 45.0% |
| ! | TACCTTCAGGAGAAGTATGG+AGG | - | chr5.3:9067753-9067772 | MS.gene57183:intron | 45.0% |
| ! | TCTTATGTGGGCTACAGCTA+TGG | - | chr5.3:9065796-9065815 | MS.gene57183:intron | 45.0% |
| ! | TGAACGCGGCCTTTCTTTTT+GGG | + | chr5.3:9067588-9067607 | None:intergenic | 45.0% |
| ! | TTATGTGGGCTACAGCTATG+GGG | - | chr5.3:9065798-9065817 | MS.gene57183:intron | 45.0% |
| ! | TTGAACGCGGCCTTTCTTTT+TGG | + | chr5.3:9067589-9067608 | None:intergenic | 45.0% |
| !! | AGCAAGGTTAGGTGTTGCTA+CGG | - | chr5.3:9065841-9065860 | MS.gene57183:intron | 45.0% |
| !! | GTAATGGCCTTGTTCCTCTT+TGG | - | chr5.3:9066002-9066021 | MS.gene57183:intron | 45.0% |
| !! | AAATTTAATCATTATTAATT+AGG | - | chr5.3:9068820-9068839 | MS.gene57183:CDS | 5.0% |
| AAATGCAGGGCAGTACCTTC+AGG | - | chr5.3:9067740-9067759 | MS.gene57183:intron | 50.0% | |
| ATGACAACACCAGCCCAAAG+AGG | + | chr5.3:9066019-9066038 | None:intergenic | 50.0% | |
| CACCCGCTATCAAGCTATTC+GGG | + | chr5.3:9068396-9068415 | None:intergenic | 50.0% | |
| CCACCCGCTATCAAGCTATT+CGG | + | chr5.3:9068397-9068416 | None:intergenic | 50.0% | |
| CCTCACCTTACAAGCCAGTT+TGG | + | chr5.3:9068493-9068512 | None:intergenic | 50.0% | |
| GCCCAATAAGCTGACATCAG+AGG | + | chr5.3:9066246-9066265 | None:intergenic | 50.0% | |
| GCTGGACAATTCATCATGGG+TGG | - | chr5.3:9067855-9067874 | MS.gene57183:intron | 50.0% | |
| TGCTCTTGTTCAATCCAGGC+AGG | - | chr5.3:9067557-9067576 | MS.gene57183:intron | 50.0% | |
| TGTTGCTACGGGGAGACATT+TGG | - | chr5.3:9065853-9065872 | MS.gene57183:intron | 50.0% | |
| ! | ACAGACCATTTCCTGGCTTG+TGG | - | chr5.3:9068927-9068946 | MS.gene57183:CDS | 50.0% |
| ! | CTTCAGGAGAAGTATGGAGG+CGG | - | chr5.3:9067756-9067775 | MS.gene57183:intron | 50.0% |
| ! | GAACGCGGCCTTTCTTTTTG+GGG | + | chr5.3:9067587-9067606 | None:intergenic | 50.0% |
| ! | GCTCCGTTACGTTTTCACCT+TGG | - | chr5.3:9069085-9069104 | MS.gene57183:CDS | 50.0% |
| ! | GGTATTGGGTTACTAGCAGC+TGG | - | chr5.3:9067804-9067823 | MS.gene57183:intron | 50.0% |
| !! | CAAGATTGGCTCTGTCCTCA+AGG | - | chr5.3:9068094-9068113 | MS.gene57183:intron | 50.0% |
| !! | CAAGGTTAGGTGTTGCTACG+GGG | - | chr5.3:9065843-9065862 | MS.gene57183:intron | 50.0% |
| !! | CCAAACTGGCTTGTAAGGTG+AGG | - | chr5.3:9068490-9068509 | MS.gene57183:intron | 50.0% |
| !! | CCCTACCAAACTGGCTTGTA+AGG | - | chr5.3:9068485-9068504 | MS.gene57183:intron | 50.0% |
| !! | GCAAGGTTAGGTGTTGCTAC+GGG | - | chr5.3:9065842-9065861 | MS.gene57183:intron | 50.0% |
| !! | GGATGAGGGCGTTGATTACT+CGG | - | chr5.3:9067904-9067923 | MS.gene57183:intron | 50.0% |
| !! | TAGCGCAATGGTGGACTCTA+TGG | + | chr5.3:9067631-9067650 | None:intergenic | 50.0% |
| AAGGCCCGAAATGTGAGTGG+TGG | + | chr5.3:9068521-9068540 | None:intergenic | 55.0% | |
| AGAAGCCTACGAAGCTGACG+TGG | - | chr5.3:9065622-9065641 | MS.gene57183:CDS | 55.0% | |
| AGAGTCCACGTCAGCTTCGT+AGG | + | chr5.3:9065630-9065649 | None:intergenic | 55.0% | |
| AGCAGCCACAAGCCAGGAAA+TGG | + | chr5.3:9068935-9068954 | None:intergenic | 55.0% | |
| CACCAGCCCAAAGAGGAACA+AGG | + | chr5.3:9066012-9066031 | None:intergenic | 55.0% | |
| CACTGCTCCACTCACTTCAG+AGG | + | chr5.3:9069001-9069020 | None:intergenic | 55.0% | |
| CCACATGGCCCTACCAGTTT+AGG | - | chr5.3:9066495-9066514 | MS.gene57183:intron | 55.0% | |
| CCTAAACTGGTAGGGCCATG+TGG | + | chr5.3:9066498-9066517 | None:intergenic | 55.0% | |
| CGCCTCCATACTTCTCCTGA+AGG | + | chr5.3:9067758-9067777 | None:intergenic | 55.0% | |
| GGAGACAACTAGCGCAATGG+TGG | + | chr5.3:9067640-9067659 | None:intergenic | 55.0% | |
| TACGAAGCTGACGTGGACTC+TGG | - | chr5.3:9065629-9065648 | MS.gene57183:CDS | 55.0% | |
| !! | CCGAATAGCTTGATAGCGGG+TGG | - | chr5.3:9068394-9068413 | MS.gene57183:intron | 55.0% |
| !!! | CTTTTTGGGGTCAACCTGCC+TGG | + | chr5.3:9067574-9067593 | None:intergenic | 55.0% |
| GCGGGTGGTCCAATCTCCAA+TGG | - | chr5.3:9068409-9068428 | MS.gene57183:intron | 60.0% | |
| ! | TTCCTGGCTTGTGGCTGCTC+TGG | - | chr5.3:9068936-9068955 | MS.gene57183:CDS | 60.0% |
| !! | GGCCTTGTTCCTCTTTGGGC+TGG | - | chr5.3:9066007-9066026 | MS.gene57183:intron | 60.0% |
| CACCAGAGCAGCCACAAGCC+AGG | + | chr5.3:9068941-9068960 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 9065521 | 9069152 | 9065521 | ID=MS.gene57183 |
| chr5.3 | mRNA | 9065521 | 9069152 | 9065521 | ID=MS.gene57183.t1;Parent=MS.gene57183 |
| chr5.3 | exon | 9068620 | 9069152 | 9068620 | ID=MS.gene57183.t1.exon1;Parent=MS.gene57183.t1 |
| chr5.3 | CDS | 9068620 | 9069152 | 9068620 | ID=cds.MS.gene57183.t1;Parent=MS.gene57183.t1 |
| chr5.3 | exon | 9067341 | 9067477 | 9067341 | ID=MS.gene57183.t1.exon2;Parent=MS.gene57183.t1 |
| chr5.3 | CDS | 9067341 | 9067477 | 9067341 | ID=cds.MS.gene57183.t1;Parent=MS.gene57183.t1 |
| chr5.3 | exon | 9066558 | 9067210 | 9066558 | ID=MS.gene57183.t1.exon3;Parent=MS.gene57183.t1 |
| chr5.3 | CDS | 9066558 | 9067210 | 9066558 | ID=cds.MS.gene57183.t1;Parent=MS.gene57183.t1 |
| chr5.3 | exon | 9065521 | 9065742 | 9065521 | ID=MS.gene57183.t1.exon4;Parent=MS.gene57183.t1 |
| chr5.3 | CDS | 9065521 | 9065742 | 9065521 | ID=cds.MS.gene57183.t1;Parent=MS.gene57183.t1 |
| Gene Sequence |
| Protein sequence |
