Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067471.t1 | XP_013465598.1 | 98.7 | 545 | 7 | 0 | 1 | 545 | 1 | 545 | 6.30E-295 | 1022.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067471.t1 | Q9S9N8 | 79.2 | 525 | 96 | 2 | 16 | 538 | 6 | 519 | 5.5e-231 | 801.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067471.t1 | A0A072VNA9 | 98.7 | 545 | 7 | 0 | 1 | 545 | 26 | 570 | 4.5e-295 | 1022.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051895 | MS.gene067471 | 0.808604 | 2.85E-50 | -1.69E-46 |
| MS.gene057321 | MS.gene067471 | -0.818127 | 2.31E-52 | -1.69E-46 |
| MS.gene059868 | MS.gene067471 | 0.836217 | 1.06E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene09558 | MS.gene067471 | PPI |
| MS.gene011751 | MS.gene067471 | PPI |
| MS.gene83599 | MS.gene067471 | PPI |
| MS.gene067471 | MS.gene041914 | PPI |
| MS.gene85960 | MS.gene067471 | PPI |
| MS.gene57183 | MS.gene067471 | PPI |
| MS.gene067471 | MS.gene44507 | PPI |
| MS.gene015216 | MS.gene067471 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067471.t1 | MTR_2g104990 | 98.716 | 545 | 7 | 0 | 1 | 545 | 26 | 570 | 0.0 | 1095 |
| MS.gene067471.t1 | MTR_2g104990 | 98.716 | 545 | 7 | 0 | 1 | 545 | 1 | 545 | 0.0 | 1095 |
| MS.gene067471.t1 | MTR_3g088440 | 59.010 | 505 | 196 | 2 | 41 | 537 | 30 | 531 | 0.0 | 617 |
| MS.gene067471.t1 | MTR_3g088460 | 58.869 | 513 | 201 | 3 | 30 | 537 | 31 | 538 | 0.0 | 587 |
| MS.gene067471.t1 | MTR_3g088440 | 64.266 | 361 | 129 | 0 | 41 | 401 | 30 | 390 | 1.37e-175 | 501 |
| MS.gene067471.t1 | MTR_3g088460 | 63.874 | 382 | 133 | 1 | 30 | 411 | 31 | 407 | 5.66e-173 | 495 |
| MS.gene067471.t1 | MTR_3g102620 | 41.453 | 468 | 252 | 9 | 31 | 492 | 54 | 505 | 1.90e-107 | 332 |
| MS.gene067471.t1 | MTR_4g095075 | 42.890 | 436 | 229 | 8 | 30 | 456 | 40 | 464 | 4.65e-106 | 328 |
| MS.gene067471.t1 | MTR_5g016270 | 43.095 | 420 | 225 | 6 | 44 | 456 | 51 | 463 | 1.53e-105 | 326 |
| MS.gene067471.t1 | MTR_8g028050 | 37.924 | 472 | 266 | 10 | 30 | 492 | 69 | 522 | 4.11e-97 | 305 |
| MS.gene067471.t1 | MTR_4g094602 | 58.042 | 143 | 57 | 1 | 216 | 355 | 1 | 143 | 4.29e-51 | 172 |
| MS.gene067471.t1 | MTR_0041s0030 | 26.601 | 406 | 266 | 12 | 54 | 452 | 38 | 418 | 1.98e-32 | 133 |
| MS.gene067471.t1 | MTR_2g062640 | 25.131 | 382 | 222 | 13 | 90 | 464 | 3 | 327 | 3.35e-23 | 102 |
| MS.gene067471.t1 | MTR_2g062640 | 26.124 | 356 | 232 | 13 | 118 | 464 | 26 | 359 | 1.52e-22 | 100 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067471.t1 | AT1G15960 | 79.238 | 525 | 96 | 2 | 16 | 538 | 6 | 519 | 0.0 | 859 |
| MS.gene067471.t1 | AT1G80830 | 77.289 | 546 | 109 | 4 | 1 | 545 | 1 | 532 | 0.0 | 853 |
| MS.gene067471.t1 | AT1G80830 | 77.289 | 546 | 109 | 4 | 1 | 545 | 1 | 532 | 0.0 | 853 |
| MS.gene067471.t1 | AT1G47240 | 39.958 | 473 | 261 | 9 | 30 | 496 | 53 | 508 | 6.68e-106 | 328 |
| MS.gene067471.t1 | AT5G67330 | 41.943 | 422 | 231 | 6 | 42 | 456 | 46 | 460 | 2.25e-105 | 326 |
| MS.gene067471.t1 | AT2G23150 | 41.527 | 419 | 233 | 6 | 44 | 456 | 52 | 464 | 3.51e-101 | 315 |
| MS.gene067471.t1 | AT4G18790 | 39.046 | 461 | 249 | 9 | 44 | 492 | 66 | 506 | 8.06e-97 | 304 |
| MS.gene067471.t1 | AT5G03280 | 27.865 | 384 | 248 | 9 | 54 | 427 | 24 | 388 | 1.07e-33 | 137 |
Find 130 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGTCATTTGCTGACTTTC+AGG | 0.118858 | 2.4:-658661 | None:intergenic |
| GCCCCAGGTTCTTCTAATTC+TGG | 0.123902 | 2.4:+654961 | MS.gene067471:CDS |
| ATTGGTGGCTCTGCTGGGGC+TGG | 0.172769 | 2.4:+657633 | MS.gene067471:CDS |
| GATAATCGGTTCTCTTATTA+TGG | 0.190853 | 2.4:+658453 | MS.gene067471:CDS |
| TTCAGGCATGGCAGTATATT+TGG | 0.208592 | 2.4:+658573 | MS.gene067471:CDS |
| TTGGTGGCTCTGCTGGGGCT+GGG | 0.236113 | 2.4:+657634 | MS.gene067471:CDS |
| GCGGTCATTGGTGGCTCTGC+TGG | 0.238481 | 2.4:+657627 | MS.gene067471:CDS |
| GGGTGTCAAACTTTATTCTT+TGG | 0.241037 | 2.4:+656076 | MS.gene067471:CDS |
| GATCTTATCTTACAGTTTCC+TGG | 0.244897 | 2.4:-655605 | None:intergenic |
| AGAAAGTGCCTTTGCTCTTA+TGG | 0.256302 | 2.4:+657072 | MS.gene067471:CDS |
| ATTGGAAAGGTTTCTGTTTC+CGG | 0.265866 | 2.4:-655007 | None:intergenic |
| CTCTTAGCATTACAGCAATA+TGG | 0.276711 | 2.4:+656447 | MS.gene067471:CDS |
| TGGTGGCTCTGCTGGGGCTG+GGG | 0.283239 | 2.4:+657635 | MS.gene067471:CDS |
| ATGACAAATGAACAAGTAAA+TGG | 0.298259 | 2.4:+658676 | MS.gene067471:CDS |
| AAGGTGTTTCTTGGGATATT+AGG | 0.304324 | 2.4:+658547 | MS.gene067471:CDS |
| AAATGGAGTTCAAAATTGTT+TGG | 0.313605 | 2.4:+657344 | MS.gene067471:CDS |
| CTTAGAATGTCTTGGGGAAA+TGG | 0.318045 | 2.4:+657327 | MS.gene067471:intron |
| TAAAGAGGGTACACACCTTT+TGG | 0.324952 | 2.4:+658627 | MS.gene067471:CDS |
| CCCCAGGTTCTTCTAATTCT+GGG | 0.326525 | 2.4:+654962 | MS.gene067471:CDS |
| TGATCTTCTTCATTTATATT+CGG | 0.330046 | 2.4:-657151 | None:intergenic |
| GCCAATCTTGGAGTGGTTAC+TGG | 0.337193 | 2.4:+655924 | MS.gene067471:CDS |
| GGTCTTGCAATTTCTCTCCT+TGG | 0.337870 | 2.4:+656715 | MS.gene067471:CDS |
| TCCGCCATTACTTGGATAAT+CGG | 0.341900 | 2.4:+658439 | MS.gene067471:CDS |
| TGCTCTTCAACGTACCTGTT+TGG | 0.342285 | 2.4:+656388 | MS.gene067471:CDS |
| TCAGTTACTTTGGATCATAT+TGG | 0.346866 | 2.4:+655863 | MS.gene067471:intron |
| CGGTCATTGGTGGCTCTGCT+GGG | 0.355327 | 2.4:+657628 | MS.gene067471:CDS |
| GGAATTGCTTTGCTTGCATC+AGG | 0.359030 | 2.4:+657365 | MS.gene067471:CDS |
| ATTTGAGCTTCCCTTTGCTT+TGG | 0.359502 | 2.4:+658083 | MS.gene067471:CDS |
| ACTCGGCATTGGTACTTTCC+AGG | 0.364353 | 2.4:+656860 | MS.gene067471:CDS |
| GCCATTACTTAGAATGTCTT+GGG | 0.369772 | 2.4:+657320 | MS.gene067471:intron |
| ATTGTGGCCAAGGTGTTTCT+TGG | 0.370719 | 2.4:+658538 | MS.gene067471:CDS |
| CAATCGATGGCTGCCAATCT+TGG | 0.372875 | 2.4:+655912 | MS.gene067471:CDS |
| TGCAGATATCCGCCATTACT+TGG | 0.375632 | 2.4:+658431 | MS.gene067471:intron |
| AGTTTGATTGTTGCGGTCAT+TGG | 0.376126 | 2.4:+657615 | MS.gene067471:CDS |
| AACAATCAAACTAGGAACTA+TGG | 0.376164 | 2.4:-657604 | None:intergenic |
| GGTGTCAAACTTTATTCTTT+GGG | 0.378048 | 2.4:+656077 | MS.gene067471:CDS |
| GGTCAAAGTTCTACGATAAC+AGG | 0.379774 | 2.4:+657386 | MS.gene067471:CDS |
| GTTTCTGTTATTTCTGTAAG+TGG | 0.391479 | 2.4:+657112 | MS.gene067471:CDS |
| AATTTCTCTCCTTGGTGCTA+TGG | 0.403043 | 2.4:+656723 | MS.gene067471:CDS |
| TCTTAGCATTACAGCAATAT+GGG | 0.404272 | 2.4:+656448 | MS.gene067471:CDS |
| TACGACTGACACCATGGATT+CGG | 0.407918 | 2.4:+657559 | MS.gene067471:CDS |
| TTGTGGCCAAGGTGTTTCTT+GGG | 0.414811 | 2.4:+658539 | MS.gene067471:CDS |
| TGGGATGTCACAGGCCACTA+TGG | 0.423728 | 2.4:-656115 | None:intergenic |
| AATATATACTACTTAATGAA+TGG | 0.424385 | 2.4:+658481 | MS.gene067471:CDS |
| CAAAGGGAAGCTCAAATGAT+AGG | 0.430883 | 2.4:-658077 | None:intergenic |
| GTTGAGACGGATCTACAATC+TGG | 0.432234 | 2.4:+655727 | MS.gene067471:intron |
| TGCCATTACTTAGAATGTCT+TGG | 0.443971 | 2.4:+657319 | MS.gene067471:intron |
| ACCAGTAACCACTCCAAGAT+TGG | 0.444301 | 2.4:-655925 | None:intergenic |
| AACAATTTGATCAGTATTTG+TGG | 0.444749 | 2.4:-655046 | None:intergenic |
| AATTCATCTCAATACCTTCT+GGG | 0.447355 | 2.4:-656134 | None:intergenic |
| TTTACAACTTCTTTAGCATC+AGG | 0.449320 | 2.4:-656652 | None:intergenic |
| ACGTTCAGTTCGCGGAATCA+AGG | 0.457249 | 2.4:+656891 | MS.gene067471:CDS |
| CTAAAAGGGAGTGGTGCTAC+TGG | 0.461708 | 2.4:+656694 | MS.gene067471:CDS |
| TTATTTGCATACATGGGGCC+TGG | 0.468558 | 2.4:+655554 | MS.gene067471:CDS |
| TCCATTGCATACATAGATCC+AGG | 0.477792 | 2.4:+655587 | MS.gene067471:CDS |
| ACGATAACAGGAACCTATGC+AGG | 0.487911 | 2.4:+657398 | MS.gene067471:CDS |
| TATTGCTGAAATTGCCATAG+TGG | 0.492449 | 2.4:+656101 | MS.gene067471:CDS |
| AAAATACCACGTTCAGTTCG+CGG | 0.494048 | 2.4:+656883 | MS.gene067471:CDS |
| GTTAACATGTACACCCATCT+TGG | 0.495254 | 2.4:-658136 | None:intergenic |
| GTTACTTTGGATCATATTGG+TGG | 0.496123 | 2.4:+655866 | MS.gene067471:intron |
| TCTCTTCCTGCACTCGGCAT+TGG | 0.496228 | 2.4:+656849 | MS.gene067471:CDS |
| TTCAACGTACCTGTTTGGAT+TGG | 0.497509 | 2.4:+656393 | MS.gene067471:CDS |
| GATGCTAAAGAAGTTGTAAA+GGG | 0.498286 | 2.4:+656655 | MS.gene067471:CDS |
| CACTAGTAGCAAAACCAAGA+TGG | 0.501607 | 2.4:+658122 | MS.gene067471:CDS |
| GGCGTCAATAAGCGGAGCAT+TGG | 0.501939 | 2.4:-655025 | None:intergenic |
| GAGCATCAATGTGCTGAGTC+CGG | 0.509577 | 2.4:-656427 | None:intergenic |
| AGTAGCACACCAATCCAAAC+AGG | 0.511891 | 2.4:-656402 | None:intergenic |
| TGATGCTAAAGAAGTTGTAA+AGG | 0.519740 | 2.4:+656654 | MS.gene067471:CDS |
| AGAAGATCAAATGAGCTGTC+AGG | 0.522894 | 2.4:+657165 | MS.gene067471:CDS |
| TTGATTGTTGCGGTCATTGG+TGG | 0.523728 | 2.4:+657618 | MS.gene067471:CDS |
| AGTTCCTAGTTTGATTGTTG+CGG | 0.526493 | 2.4:+657608 | MS.gene067471:CDS |
| TGCCCAGAATTAGAAGAACC+TGG | 0.527178 | 2.4:-654964 | None:intergenic |
| TGTACATGTTAACTCTATCA+TGG | 0.528201 | 2.4:+658146 | MS.gene067471:CDS |
| CCACAATTCATTTCAAGCAC+CGG | 0.530989 | 2.4:+654988 | MS.gene067471:CDS |
| TGACATAGATATTGTGGCCA+AGG | 0.536322 | 2.4:+658528 | MS.gene067471:CDS |
| TCATAGTGACATAGATATTG+TGG | 0.537613 | 2.4:+658522 | MS.gene067471:CDS |
| TGGATTGGTGTGCTACTGAC+CGG | 0.537679 | 2.4:+656408 | MS.gene067471:CDS |
| TTGAGACGGATCTACAATCT+GGG | 0.537839 | 2.4:+655728 | MS.gene067471:CDS |
| TGGGGCACAATATAAATATG+AGG | 0.538942 | 2.4:+655747 | MS.gene067471:CDS |
| TGCAGGGCAGTATGTCATGC+AGG | 0.544266 | 2.4:+657415 | MS.gene067471:CDS |
| GCAATGGAAACAAGAAATCC+AGG | 0.544675 | 2.4:-655572 | None:intergenic |
| AAAGTACCAATGCCGAGTGC+AGG | 0.550845 | 2.4:-656855 | None:intergenic |
| AAGTGCCTTTGCTCTTATGG+TGG | 0.551298 | 2.4:+657075 | MS.gene067471:CDS |
| GGCATGGCAGTATATTTGGC+CGG | 0.551698 | 2.4:+658577 | MS.gene067471:CDS |
| AGCAATTGTAAACACAAGAA+AGG | 0.554039 | 2.4:-656596 | None:intergenic |
| AAGCACAAGATATGCTATAC+CGG | 0.555109 | 2.4:-658596 | None:intergenic |
| AAATAACAGAAACATTTATG+AGG | 0.555460 | 2.4:-657102 | None:intergenic |
| AGGTTTCACATACTCTAAGT+AGG | 0.556394 | 2.4:-657213 | None:intergenic |
| TCCTGGATCTATGTATGCAA+TGG | 0.557782 | 2.4:-655588 | None:intergenic |
| AAAATTTATTTGCATACATG+GGG | 0.559327 | 2.4:+655549 | MS.gene067471:CDS |
| TTGATTCCGCGAACTGAACG+TGG | 0.568877 | 2.4:-656889 | None:intergenic |
| GCCCAGAATTAGAAGAACCT+GGG | 0.569323 | 2.4:-654963 | None:intergenic |
| AATACCTTCTGGGATGTCAC+AGG | 0.569404 | 2.4:-656124 | None:intergenic |
| CCGGTGCTTGAAATGAATTG+TGG | 0.574049 | 2.4:-654988 | None:intergenic |
| ATAATCACTTGCAGTTGAGA+CGG | 0.574710 | 2.4:+655714 | MS.gene067471:intron |
| AGGAGTGGTACCAAAGCAAA+GGG | 0.575001 | 2.4:-658093 | None:intergenic |
| ACTAGTAGCAAAACCAAGAT+GGG | 0.576135 | 2.4:+658123 | MS.gene067471:CDS |
| GTGCCGCAACTAAAAGGGAG+TGG | 0.578359 | 2.4:+656685 | MS.gene067471:CDS |
| GAGGAGTGGTACCAAAGCAA+AGG | 0.578409 | 2.4:-658094 | None:intergenic |
| TGCTCTTGTAATTCAATCGA+TGG | 0.578489 | 2.4:+655899 | MS.gene067471:CDS |
| CAGGTGCTGTTAGAGCCAAA+AGG | 0.580978 | 2.4:-658642 | None:intergenic |
| CAATAAGCGGAGCATTGGAA+AGG | 0.584083 | 2.4:-655020 | None:intergenic |
| AAAGAGAATATGGCTGCCCC+AGG | 0.584661 | 2.4:+654946 | None:intergenic |
| CATGACATACTGCCCTGCAT+AGG | 0.585306 | 2.4:-657411 | None:intergenic |
| ATTGTAGAGCTGAATATTCG+CGG | 0.585585 | 2.4:+656055 | MS.gene067471:CDS |
| ATGACCGCAACAATCAAACT+AGG | 0.585887 | 2.4:-657612 | None:intergenic |
| GTTAGCATATTCCGAATCCA+TGG | 0.596442 | 2.4:-657570 | None:intergenic |
| TTGATTTACGACTGACACCA+TGG | 0.598584 | 2.4:+657553 | MS.gene067471:CDS |
| TTCACATACTCTAAGTAGGA+AGG | 0.602936 | 2.4:-657209 | None:intergenic |
| TTGTAGAGCTGAATATTCGC+GGG | 0.603523 | 2.4:+656056 | MS.gene067471:CDS |
| TATATTCGGAGAATTGCAAA+CGG | 0.605578 | 2.4:-657137 | None:intergenic |
| GAAGAGCATATTTAACGCAA+AGG | 0.606833 | 2.4:-656373 | None:intergenic |
| CCACAATCTCTTCCTGCACT+CGG | 0.612477 | 2.4:+656843 | MS.gene067471:CDS |
| TAATATCCCAAGAAACACCT+TGG | 0.615738 | 2.4:-658545 | None:intergenic |
| AGAACCGATTATCCAAGTAA+TGG | 0.617458 | 2.4:-658443 | None:intergenic |
| GTATTTGTGGCGTCAATAAG+CGG | 0.624417 | 2.4:-655033 | None:intergenic |
| GAAAGCCACCATAAGAGCAA+AGG | 0.627298 | 2.4:-657080 | None:intergenic |
| CCGAGTGCAGGAAGAGATTG+TGG | 0.627483 | 2.4:-656843 | None:intergenic |
| GGTCATTGGTGGCTCTGCTG+GGG | 0.630348 | 2.4:+657629 | MS.gene067471:CDS |
| CCATTACTTAGAATGTCTTG+GGG | 0.636359 | 2.4:+657321 | MS.gene067471:intron |
| ACCGATTATCCAAGTAATGG+CGG | 0.641211 | 2.4:-658440 | None:intergenic |
| CTTAGCATTACAGCAATATG+GGG | 0.651366 | 2.4:+656449 | MS.gene067471:CDS |
| CTACTAGTGAACTTGAGGAG+TGG | 0.652111 | 2.4:-658108 | None:intergenic |
| CCCAGAATTAGAAGAACCTG+GGG | 0.668506 | 2.4:-654962 | None:intergenic |
| GTGGCCTGTGACATCCCAGA+AGG | 0.672235 | 2.4:+656120 | MS.gene067471:CDS |
| CGATAACAGGAACCTATGCA+GGG | 0.673315 | 2.4:+657399 | MS.gene067471:CDS |
| GATGGCTGCCAATCTTGGAG+TGG | 0.683939 | 2.4:+655917 | MS.gene067471:CDS |
| TCTGCTGGACTACTTCTCTG+AGG | 0.723987 | 2.4:-658745 | None:intergenic |
| TGAGACGGATCTACAATCTG+GGG | 0.726732 | 2.4:+655729 | MS.gene067471:CDS |
| ACGGCATAACCATAGCACCA+AGG | 0.756062 | 2.4:-656732 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATTTATTTGCATACAT+GGG | + | chr2.4:655548-655567 | MS.gene067471:CDS | 15.0% |
| !! | AACAACTAGAAAAAAAATTA+TGG | - | chr2.4:657695-657714 | None:intergenic | 15.0% |
| !! | AATATATACTACTTAATGAA+TGG | + | chr2.4:658481-658500 | MS.gene067471:CDS | 15.0% |
| !! | ACTTTATATACAATTGTTAT+TGG | + | chr2.4:657256-657275 | MS.gene067471:intron | 15.0% |
| !!! | AATTTTTTTTCTAGTTGTTT+TGG | + | chr2.4:657696-657715 | MS.gene067471:intron | 15.0% |
| !! | AAAATTTATTTGCATACATG+GGG | + | chr2.4:655549-655568 | MS.gene067471:CDS | 20.0% |
| !! | AAATAACAGAAACATTTATG+AGG | - | chr2.4:657105-657124 | None:intergenic | 20.0% |
| !! | AACAAAAATATTTGTCAACA+TGG | + | chr2.4:657953-657972 | MS.gene067471:intron | 20.0% |
| !! | ATAAATGTTGAAAGAGAAAA+AGG | - | chr2.4:656948-656967 | None:intergenic | 20.0% |
| !! | ATAGAAAACACATAAATGAA+TGG | - | chr2.4:655509-655528 | None:intergenic | 20.0% |
| !! | GAAAAATTTATTTGCATACA+TGG | + | chr2.4:655547-655566 | MS.gene067471:CDS | 20.0% |
| !! | TGATCTTCTTCATTTATATT+CGG | - | chr2.4:657154-657173 | None:intergenic | 20.0% |
| !!! | ACTTTTACTAAATAAAGTTG+TGG | + | chr2.4:655970-655989 | MS.gene067471:intron | 20.0% |
| !!! | AGAATACATTTTAAGAGAAA+AGG | - | chr2.4:656792-656811 | None:intergenic | 20.0% |
| !!! | ATAAACACACTACATTTTAT+AGG | + | chr2.4:656201-656220 | MS.gene067471:intron | 20.0% |
| !!! | ATATACAATTGTTATTGGTA+AGG | + | chr2.4:657261-657280 | MS.gene067471:intron | 20.0% |
| !!! | ATTTAACAATTTTCTTTGAC+AGG | + | chr2.4:657027-657046 | MS.gene067471:intron | 20.0% |
| !!! | CAATTTTTTTTCCTTCTTTA+GGG | + | chr2.4:657525-657544 | MS.gene067471:intron | 20.0% |
| !!! | CATATTTTCCATTTTTCTTT+CGG | + | chr2.4:656282-656301 | MS.gene067471:intron | 20.0% |
| !!! | CTCTTTCAAAACATTTTATT+TGG | + | chr2.4:655370-655389 | MS.gene067471:intron | 20.0% |
| !!! | CTTAAGGCTTTATAAAAATT+TGG | - | chr2.4:656253-656272 | None:intergenic | 20.0% |
| !!! | TAAACACACTACATTTTATA+GGG | + | chr2.4:656202-656221 | MS.gene067471:intron | 20.0% |
| ! | AAAGAAGGAAAAAAAATTGC+AGG | - | chr2.4:657524-657543 | None:intergenic | 25.0% |
| ! | AAATATGGTTAGTGTTCTTA+AGG | - | chr2.4:656269-656288 | None:intergenic | 25.0% |
| ! | AAATGGAGTTCAAAATTGTT+TGG | + | chr2.4:657344-657363 | MS.gene067471:CDS | 25.0% |
| ! | AACAATTTGATCAGTATTTG+TGG | - | chr2.4:655049-655068 | None:intergenic | 25.0% |
| ! | AAGAAGGAAAAAAAATTGCA+GGG | - | chr2.4:657523-657542 | None:intergenic | 25.0% |
| ! | AAGAGAAAAGGAAAACAAAA+TGG | - | chr2.4:656780-656799 | None:intergenic | 25.0% |
| ! | AGACATATTGTCAAGTAAAA+AGG | - | chr2.4:657742-657761 | None:intergenic | 25.0% |
| ! | AGTTTACTGTATTCATTCTA+TGG | + | chr2.4:656473-656492 | MS.gene067471:intron | 25.0% |
| ! | ATCCAAAGTAACTGAAAAAA+TGG | - | chr2.4:655858-655877 | None:intergenic | 25.0% |
| ! | ATGACAAATGAACAAGTAAA+TGG | + | chr2.4:658676-658695 | MS.gene067471:CDS | 25.0% |
| ! | CGAAAGAAAAATGGAAAATA+TGG | - | chr2.4:656284-656303 | None:intergenic | 25.0% |
| ! | CTAGAAAAAAAATTATGGCA+AGG | - | chr2.4:657690-657709 | None:intergenic | 25.0% |
| ! | GAAGAATTAGAAACATCAAA+AGG | - | chr2.4:657500-657519 | None:intergenic | 25.0% |
| ! | GATCAACAACAAAACAAAAA+TGG | - | chr2.4:656549-656568 | None:intergenic | 25.0% |
| ! | TTACAATATACACAAGTAAC+AGG | - | chr2.4:657236-657255 | None:intergenic | 25.0% |
| ! | TTATGACATTACTACAATCA+CGG | - | chr2.4:656971-656990 | None:intergenic | 25.0% |
| ! | TTCCAAAATATTAGTCATAG+AGG | - | chr2.4:658357-658376 | None:intergenic | 25.0% |
| !!! | GCAATTTTTTTTCCTTCTTT+AGG | + | chr2.4:657524-657543 | MS.gene067471:intron | 25.0% |
| !!! | TTTTTGTTTTGTTGTTGATC+AGG | + | chr2.4:656549-656568 | MS.gene067471:intron | 25.0% |
| AAAATATTAGTCATAGAGGC+GGG | - | chr2.4:658353-658372 | None:intergenic | 30.0% | |
| AAACAAACAACTCTTGACAT+TGG | - | chr2.4:655478-655497 | None:intergenic | 30.0% | |
| AAATGGTGAAAAAGAGATGA+AGG | - | chr2.4:655841-655860 | None:intergenic | 30.0% | |
| AAATTCATCTCAATACCTTC+TGG | - | chr2.4:656138-656157 | None:intergenic | 30.0% | |
| AACAATCAAACTAGGAACTA+TGG | - | chr2.4:657607-657626 | None:intergenic | 30.0% | |
| AAGAAGAGATGAAGAACTAA+CGG | - | chr2.4:656754-656773 | None:intergenic | 30.0% | |
| AAGGGATTGAATGAGAATTA+AGG | - | chr2.4:655090-655109 | None:intergenic | 30.0% | |
| AATCAAGAAATCCCTAAAGA+AGG | - | chr2.4:657539-657558 | None:intergenic | 30.0% | |
| AATTCATCTCAATACCTTCT+GGG | - | chr2.4:656137-656156 | None:intergenic | 30.0% | |
| AGAAGGAAAAAAAATTGCAG+GGG | - | chr2.4:657522-657541 | None:intergenic | 30.0% | |
| AGCAATTGTAAACACAAGAA+AGG | - | chr2.4:656599-656618 | None:intergenic | 30.0% | |
| CAAAATATTAGTCATAGAGG+CGG | - | chr2.4:658354-658373 | None:intergenic | 30.0% | |
| CAAAGTGGACACAAAAAATA+CGG | - | chr2.4:657465-657484 | None:intergenic | 30.0% | |
| CATATAGAACTGAATGAATC+AGG | - | chr2.4:656007-656026 | None:intergenic | 30.0% | |
| GAAAACACATAAATGAATGG+TGG | - | chr2.4:655506-655525 | None:intergenic | 30.0% | |
| GAATGCATACACAAAGAAAA+GGG | - | chr2.4:657994-658013 | None:intergenic | 30.0% | |
| GATGCTAAAGAAGTTGTAAA+GGG | + | chr2.4:656655-656674 | MS.gene067471:CDS | 30.0% | |
| GGTGTCAAACTTTATTCTTT+GGG | + | chr2.4:656077-656096 | MS.gene067471:CDS | 30.0% | |
| GTTCAAAAAGGATTAAGTAG+AGG | + | chr2.4:657883-657902 | MS.gene067471:intron | 30.0% | |
| TAGGGATTTATTTAGTGCTT+AGG | + | chr2.4:656220-656239 | MS.gene067471:intron | 30.0% | |
| TATATTCGGAGAATTGCAAA+CGG | - | chr2.4:657140-657159 | None:intergenic | 30.0% | |
| TATGGTTTGACATCATAAAG+AGG | + | chr2.4:656491-656510 | MS.gene067471:intron | 30.0% | |
| TCATAGTGACATAGATATTG+TGG | + | chr2.4:658522-658541 | MS.gene067471:CDS | 30.0% | |
| TCTTAGCATTACAGCAATAT+GGG | + | chr2.4:656448-656467 | MS.gene067471:CDS | 30.0% | |
| TGAATGCATACACAAAGAAA+AGG | - | chr2.4:657995-658014 | None:intergenic | 30.0% | |
| TGATGCTAAAGAAGTTGTAA+AGG | + | chr2.4:656654-656673 | MS.gene067471:CDS | 30.0% | |
| TGTACATGTTAACTCTATCA+TGG | + | chr2.4:658146-658165 | MS.gene067471:CDS | 30.0% | |
| TGTCATAAGTCTGTAAATTG+TGG | + | chr2.4:656983-657002 | MS.gene067471:intron | 30.0% | |
| TTACTAAATAAAGTTGTGGC+TGG | + | chr2.4:655974-655993 | MS.gene067471:intron | 30.0% | |
| TTATAGTACTTATGATCACG+AGG | + | chr2.4:655792-655811 | MS.gene067471:intron | 30.0% | |
| TTATTTAGTGCTTAGGATTG+AGG | + | chr2.4:656227-656246 | MS.gene067471:intron | 30.0% | |
| TTGTACATATATGCAGTGAT+TGG | + | chr2.4:656345-656364 | MS.gene067471:intron | 30.0% | |
| TTTACAACTTCTTTAGCATC+AGG | - | chr2.4:656655-656674 | None:intergenic | 30.0% | |
| ! | AAGATAAGCTATGTTTTGCA+AGG | - | chr2.4:658327-658346 | None:intergenic | 30.0% |
| ! | AGACTTTTAAGCTTCCAAAA+AGG | + | chr2.4:658255-658274 | MS.gene067471:intron | 30.0% |
| ! | ATGTGTTTTCTATTTTGCAG+AGG | + | chr2.4:655516-655535 | MS.gene067471:intron | 30.0% |
| ! | GATAATCGGTTCTCTTATTA+TGG | + | chr2.4:658453-658472 | MS.gene067471:CDS | 30.0% |
| ! | GGAAAGTACATATAGAATCA+TGG | - | chr2.4:656819-656838 | None:intergenic | 30.0% |
| ! | TAACAATTTTCTTTGACAGG+AGG | + | chr2.4:657030-657049 | MS.gene067471:intron | 30.0% |
| ! | TCAGTTACTTTGGATCATAT+TGG | + | chr2.4:655863-655882 | MS.gene067471:intron | 30.0% |
| !! | AAGGCATTCGAAGATATTTT+AGG | - | chr2.4:657723-657742 | None:intergenic | 30.0% |
| !! | GTTTCTGTTATTTCTGTAAG+TGG | + | chr2.4:657112-657131 | MS.gene067471:CDS | 30.0% |
| !!! | CACCATTTTTTCAGTTACTT+TGG | + | chr2.4:655853-655872 | MS.gene067471:intron | 30.0% |
| AAATACTTGCGACATTCCTT+TGG | - | chr2.4:655239-655258 | None:intergenic | 35.0% | |
| AAGAGAAGCCGAAAGAAAAA+TGG | - | chr2.4:656293-656312 | None:intergenic | 35.0% | |
| AAGCACAAGATATGCTATAC+CGG | - | chr2.4:658599-658618 | None:intergenic | 35.0% | |
| AATTAAGGCAAACTCACATC+AGG | - | chr2.4:655075-655094 | None:intergenic | 35.0% | |
| ACTAGTAGCAAAACCAAGAT+GGG | + | chr2.4:658123-658142 | MS.gene067471:CDS | 35.0% | |
| ACTTTATATAACCACGTGCA+CGG | - | chr2.4:657909-657928 | None:intergenic | 35.0% | |
| AGAACCGATTATCCAAGTAA+TGG | - | chr2.4:658446-658465 | None:intergenic | 35.0% | |
| AGGTTATCAATGCTTCAAAG+TGG | - | chr2.4:657480-657499 | None:intergenic | 35.0% | |
| AGGTTTCACATACTCTAAGT+AGG | - | chr2.4:657216-657235 | None:intergenic | 35.0% | |
| AGTTCCTAGTTTGATTGTTG+CGG | + | chr2.4:657608-657627 | MS.gene067471:CDS | 35.0% | |
| ATAATCACTTGCAGTTGAGA+CGG | + | chr2.4:655714-655733 | MS.gene067471:intron | 35.0% | |
| ATCTGATCAGTAGACAAAGA+AGG | - | chr2.4:658054-658073 | None:intergenic | 35.0% | |
| ATTAAGGCAAACTCACATCA+GGG | - | chr2.4:655074-655093 | None:intergenic | 35.0% | |
| ATTGGAAAGGTTTCTGTTTC+CGG | - | chr2.4:655010-655029 | None:intergenic | 35.0% | |
| ATTGTAGAGCTGAATATTCG+CGG | + | chr2.4:656055-656074 | MS.gene067471:CDS | 35.0% | |
| CCATTACTTAGAATGTCTTG+GGG | + | chr2.4:657321-657340 | MS.gene067471:intron | 35.0% | |
| CTACTATCTGTCATTGTCAT+AGG | - | chr2.4:658292-658311 | None:intergenic | 35.0% | |
| CTATGACAATGACAGATAGT+AGG | + | chr2.4:658290-658309 | MS.gene067471:intron | 35.0% | |
| CTCTTAGCATTACAGCAATA+TGG | + | chr2.4:656447-656466 | MS.gene067471:CDS | 35.0% | |
| CTTAGCATTACAGCAATATG+GGG | + | chr2.4:656449-656468 | MS.gene067471:CDS | 35.0% | |
| CTTCCAAAAAGGTCAGAAAT+GGG | + | chr2.4:658266-658285 | MS.gene067471:intron | 35.0% | |
| GATCTTATCTTACAGTTTCC+TGG | - | chr2.4:655608-655627 | None:intergenic | 35.0% | |
| GCCATTACTTAGAATGTCTT+GGG | + | chr2.4:657320-657339 | MS.gene067471:intron | 35.0% | |
| GGGTGTCAAACTTTATTCTT+TGG | + | chr2.4:656076-656095 | MS.gene067471:CDS | 35.0% | |
| GTGCTTCGCAAAAATAAAGA+GGG | + | chr2.4:658613-658632 | MS.gene067471:CDS | 35.0% | |
| GTTGTATTCTCATGTCATGT+AGG | + | chr2.4:655261-655280 | MS.gene067471:intron | 35.0% | |
| TAATATCCCAAGAAACACCT+TGG | - | chr2.4:658548-658567 | None:intergenic | 35.0% | |
| TATTGCTGAAATTGCCATAG+TGG | + | chr2.4:656101-656120 | MS.gene067471:CDS | 35.0% | |
| TCTGATCAGTAGACAAAGAA+GGG | - | chr2.4:658053-658072 | None:intergenic | 35.0% | |
| TGCCATTACTTAGAATGTCT+TGG | + | chr2.4:657319-657338 | MS.gene067471:intron | 35.0% | |
| TGCTCTTGTAATTCAATCGA+TGG | + | chr2.4:655899-655918 | MS.gene067471:CDS | 35.0% | |
| TGGAAGCTTAAAAGTCTCTT+TGG | - | chr2.4:658252-658271 | None:intergenic | 35.0% | |
| TGGAATTTGATCACAATAGC+TGG | - | chr2.4:655159-655178 | None:intergenic | 35.0% | |
| TGGGGCACAATATAAATATG+AGG | + | chr2.4:655747-655766 | MS.gene067471:CDS | 35.0% | |
| TGTGCTTCGCAAAAATAAAG+AGG | + | chr2.4:658612-658631 | MS.gene067471:CDS | 35.0% | |
| TTCACATACTCTAAGTAGGA+AGG | - | chr2.4:657212-657231 | None:intergenic | 35.0% | |
| TTGTTTGGAAAGTCAGTATC+TGG | + | chr2.4:655125-655144 | MS.gene067471:intron | 35.0% | |
| TTTGTAACTGAGCTACATTG+TGG | + | chr2.4:657822-657841 | MS.gene067471:intron | 35.0% | |
| ! | AAGGTGTTTCTTGGGATATT+AGG | + | chr2.4:658547-658566 | MS.gene067471:CDS | 35.0% |
| ! | CGCCTCTATGACTAATATTT+TGG | + | chr2.4:658352-658371 | MS.gene067471:intron | 35.0% |
| ! | CTTGGGATATTAGGATTTTC+AGG | + | chr2.4:658556-658575 | MS.gene067471:CDS | 35.0% |
| ! | GAAGAGCATATTTAACGCAA+AGG | - | chr2.4:656376-656395 | None:intergenic | 35.0% |
| ! | GTTACTTTGGATCATATTGG+TGG | + | chr2.4:655866-655885 | MS.gene067471:intron | 35.0% |
| ! | TACAATTGCTGCGTGTTTTT+GGG | + | chr2.4:656609-656628 | MS.gene067471:CDS | 35.0% |
| ! | TTACAATTGCTGCGTGTTTT+TGG | + | chr2.4:656608-656627 | MS.gene067471:CDS | 35.0% |
| ! | TTTTGCTACTAGTGAACTTG+AGG | - | chr2.4:658116-658135 | None:intergenic | 35.0% |
| ! | TTTTTGTGCCGCAACTAAAA+GGG | + | chr2.4:656680-656699 | MS.gene067471:CDS | 35.0% |
| !! | GATATTAGGATTTTCAGGCA+TGG | + | chr2.4:658561-658580 | MS.gene067471:CDS | 35.0% |
| !! | TTTGTCATTTGCTGACTTTC+AGG | - | chr2.4:658664-658683 | None:intergenic | 35.0% |
| !!! | GTTTTGTTGTTGATCAGGTT+AGG | + | chr2.4:656554-656573 | MS.gene067471:intron | 35.0% |
| AAAATACCACGTTCAGTTCG+CGG | + | chr2.4:656883-656902 | MS.gene067471:CDS | 40.0% | |
| AAATTCCACTGTCCACTAAC+GGG | + | chr2.4:655171-655190 | MS.gene067471:intron | 40.0% | |
| ACCGATTATCCAAGTAATGG+CGG | - | chr2.4:658443-658462 | None:intergenic | 40.0% | |
| ACTACTCATAGCTGCACTAT+TGG | + | chr2.4:657850-657869 | MS.gene067471:intron | 40.0% | |
| AGAAGATCAAATGAGCTGTC+AGG | + | chr2.4:657165-657184 | MS.gene067471:CDS | 40.0% | |
| AGTTTGATTGTTGCGGTCAT+TGG | + | chr2.4:657615-657634 | MS.gene067471:CDS | 40.0% | |
| ATCATAGCTCGTAGATAGCT+AGG | - | chr2.4:655431-655450 | None:intergenic | 40.0% | |
| ATGACCGCAACAATCAAACT+AGG | - | chr2.4:657615-657634 | None:intergenic | 40.0% | |
| ATTTGAGCTTCCCTTTGCTT+TGG | + | chr2.4:658083-658102 | MS.gene067471:CDS | 40.0% | |
| CAAAGGGAAGCTCAAATGAT+AGG | - | chr2.4:658080-658099 | None:intergenic | 40.0% | |
| CAAATTCCACTGTCCACTAA+CGG | + | chr2.4:655170-655189 | MS.gene067471:intron | 40.0% | |
| CACTAGTAGCAAAACCAAGA+TGG | + | chr2.4:658122-658141 | MS.gene067471:CDS | 40.0% | |
| CATGTCATGTAGGAGTTTCA+GGG | + | chr2.4:655271-655290 | MS.gene067471:intron | 40.0% | |
| CCACAATTCATTTCAAGCAC+CGG | + | chr2.4:654988-655007 | MS.gene067471:CDS | 40.0% | |
| CCCCAAGACATTCTAAGTAA+TGG | - | chr2.4:657324-657343 | None:intergenic | 40.0% | |
| CTTAGAATGTCTTGGGGAAA+TGG | + | chr2.4:657327-657346 | MS.gene067471:intron | 40.0% | |
| GCAATGGAAACAAGAAATCC+AGG | - | chr2.4:655575-655594 | None:intergenic | 40.0% | |
| GCTTCCAAAAAGGTCAGAAA+TGG | + | chr2.4:658265-658284 | MS.gene067471:intron | 40.0% | |
| GGCTTCATCTGAGTTCAAAA+AGG | + | chr2.4:657871-657890 | MS.gene067471:intron | 40.0% | |
| GGTCAAAGTTCTACGATAAC+AGG | + | chr2.4:657386-657405 | MS.gene067471:CDS | 40.0% | |
| GTATTTGTGGCGTCAATAAG+CGG | - | chr2.4:655036-655055 | None:intergenic | 40.0% | |
| GTTAACATGTACACCCATCT+TGG | - | chr2.4:658139-658158 | None:intergenic | 40.0% | |
| GTTAGCATATTCCGAATCCA+TGG | - | chr2.4:657573-657592 | None:intergenic | 40.0% | |
| TCATGTCATGTAGGAGTTTC+AGG | + | chr2.4:655270-655289 | MS.gene067471:intron | 40.0% | |
| TCCATTGCATACATAGATCC+AGG | + | chr2.4:655587-655606 | MS.gene067471:CDS | 40.0% | |
| TCCGCCATTACTTGGATAAT+CGG | + | chr2.4:658439-658458 | MS.gene067471:CDS | 40.0% | |
| TCCTGGATCTATGTATGCAA+TGG | - | chr2.4:655591-655610 | None:intergenic | 40.0% | |
| TGACATAGATATTGTGGCCA+AGG | + | chr2.4:658528-658547 | MS.gene067471:CDS | 40.0% | |
| TTCAACGTACCTGTTTGGAT+TGG | + | chr2.4:656393-656412 | MS.gene067471:CDS | 40.0% | |
| TTCAGGCATGGCAGTATATT+TGG | + | chr2.4:658573-658592 | MS.gene067471:CDS | 40.0% | |
| TTGAGACGGATCTACAATCT+GGG | + | chr2.4:655728-655747 | MS.gene067471:CDS | 40.0% | |
| TTGATTTACGACTGACACCA+TGG | + | chr2.4:657553-657572 | MS.gene067471:CDS | 40.0% | |
| TTGTAGAGCTGAATATTCGC+GGG | + | chr2.4:656056-656075 | MS.gene067471:CDS | 40.0% | |
| ! | AAATGAGTTGAGTCGAGGTT+TGG | + | chr2.4:655295-655314 | MS.gene067471:intron | 40.0% |
| ! | AACTGAACGTGGTATTTTCC+TGG | - | chr2.4:656881-656900 | None:intergenic | 40.0% |
| ! | CTTTTTGTGCCGCAACTAAA+AGG | + | chr2.4:656679-656698 | MS.gene067471:CDS | 40.0% |
| !! | AATTTCTCTCCTTGGTGCTA+TGG | + | chr2.4:656723-656742 | MS.gene067471:CDS | 40.0% |
| !! | AGAAAGTGCCTTTGCTCTTA+TGG | + | chr2.4:657072-657091 | MS.gene067471:CDS | 40.0% |
| !! | TAAAGAGGGTACACACCTTT+TGG | + | chr2.4:658627-658646 | MS.gene067471:CDS | 40.0% |
| AAAGCTGTGGACTCAGTTTG+GGG | - | chr2.4:655198-655217 | None:intergenic | 45.0% | |
| AAGTGCCTTTGCTCTTATGG+TGG | + | chr2.4:657075-657094 | MS.gene067471:CDS | 45.0% | |
| AATTCCACTGTCCACTAACG+GGG | + | chr2.4:655172-655191 | MS.gene067471:intron | 45.0% | |
| ACAAAGCTGTGGACTCAGTT+TGG | - | chr2.4:655200-655219 | None:intergenic | 45.0% | |
| ACAGATAGTAGGTCAGACTC+GGG | + | chr2.4:658301-658320 | MS.gene067471:intron | 45.0% | |
| ACCAGTAACCACTCCAAGAT+TGG | - | chr2.4:655928-655947 | None:intergenic | 45.0% | |
| ACGATAACAGGAACCTATGC+AGG | + | chr2.4:657398-657417 | MS.gene067471:CDS | 45.0% | |
| ACTTGCGACATTCCTTTGGA+GGG | - | chr2.4:655235-655254 | None:intergenic | 45.0% | |
| AGGAGTGGTACCAAAGCAAA+GGG | - | chr2.4:658096-658115 | None:intergenic | 45.0% | |
| AGTAGCACACCAATCCAAAC+AGG | - | chr2.4:656405-656424 | None:intergenic | 45.0% | |
| CAAAGCTGTGGACTCAGTTT+GGG | - | chr2.4:655199-655218 | None:intergenic | 45.0% | |
| CCCAGAATTAGAAGAACCTG+GGG | - | chr2.4:654965-654984 | None:intergenic | 45.0% | |
| CCCCAGGTTCTTCTAATTCT+GGG | + | chr2.4:654962-654981 | MS.gene067471:CDS | 45.0% | |
| CCGGTGCTTGAAATGAATTG+TGG | - | chr2.4:654991-655010 | None:intergenic | 45.0% | |
| CGATAACAGGAACCTATGCA+GGG | + | chr2.4:657399-657418 | MS.gene067471:CDS | 45.0% | |
| CTACTAGTGAACTTGAGGAG+TGG | - | chr2.4:658111-658130 | None:intergenic | 45.0% | |
| GAAAGCCACCATAAGAGCAA+AGG | - | chr2.4:657083-657102 | None:intergenic | 45.0% | |
| GACAGATAGTAGGTCAGACT+CGG | + | chr2.4:658300-658319 | MS.gene067471:intron | 45.0% | |
| GATCACAATAGCTGGTCGTT+GGG | - | chr2.4:655151-655170 | None:intergenic | 45.0% | |
| GCCCAGAATTAGAAGAACCT+GGG | - | chr2.4:654966-654985 | None:intergenic | 45.0% | |
| GGAATTGCTTTGCTTGCATC+AGG | + | chr2.4:657365-657384 | MS.gene067471:CDS | 45.0% | |
| GGTCTTGCAATTTCTCTCCT+TGG | + | chr2.4:656715-656734 | MS.gene067471:CDS | 45.0% | |
| GTTGAGACGGATCTACAATC+TGG | + | chr2.4:655727-655746 | MS.gene067471:intron | 45.0% | |
| TACGACTGACACCATGGATT+CGG | + | chr2.4:657559-657578 | MS.gene067471:CDS | 45.0% | |
| TACTTGCGACATTCCTTTGG+AGG | - | chr2.4:655236-655255 | None:intergenic | 45.0% | |
| TGAGACGGATCTACAATCTG+GGG | + | chr2.4:655729-655748 | MS.gene067471:CDS | 45.0% | |
| TGATCACAATAGCTGGTCGT+TGG | - | chr2.4:655152-655171 | None:intergenic | 45.0% | |
| TGCAGATATCCGCCATTACT+TGG | + | chr2.4:658431-658450 | MS.gene067471:intron | 45.0% | |
| TGCCCAGAATTAGAAGAACC+TGG | - | chr2.4:654967-654986 | None:intergenic | 45.0% | |
| TGCTCTTCAACGTACCTGTT+TGG | + | chr2.4:656388-656407 | MS.gene067471:CDS | 45.0% | |
| TTATTTGCATACATGGGGCC+TGG | + | chr2.4:655554-655573 | MS.gene067471:CDS | 45.0% | |
| TTGATTGTTGCGGTCATTGG+TGG | + | chr2.4:657618-657637 | MS.gene067471:CDS | 45.0% | |
| TTTCCGTCCATACAAAGCTG+TGG | - | chr2.4:655211-655230 | None:intergenic | 45.0% | |
| ! | ACTGAGTCCACAGCTTTGTA+TGG | + | chr2.4:655201-655220 | MS.gene067471:intron | 45.0% |
| ! | AGGCCCATTTCTGACCTTTT+TGG | - | chr2.4:658272-658291 | None:intergenic | 45.0% |
| ! | AGGGTAAATGAGTTGAGTCG+AGG | + | chr2.4:655290-655309 | MS.gene067471:intron | 45.0% |
| ! | AGTCCACAGCTTTGTATGGA+CGG | + | chr2.4:655205-655224 | MS.gene067471:intron | 45.0% |
| ! | ATTGTGGCCAAGGTGTTTCT+TGG | + | chr2.4:658538-658557 | MS.gene067471:CDS | 45.0% |
| ! | CAGTTCTATATGCTGCTTGC+AGG | + | chr2.4:656015-656034 | MS.gene067471:intron | 45.0% |
| ! | CTATTTTGCAGAGGACAAGC+TGG | + | chr2.4:655525-655544 | MS.gene067471:intron | 45.0% |
| ! | TTGTGGCCAAGGTGTTTCTT+GGG | + | chr2.4:658539-658558 | MS.gene067471:CDS | 45.0% |
| !! | AATACCTTCTGGGATGTCAC+AGG | - | chr2.4:656127-656146 | None:intergenic | 45.0% |
| !! | CAATAAGCGGAGCATTGGAA+AGG | - | chr2.4:655023-655042 | None:intergenic | 45.0% |
| !! | ACAAAAATAAAAAAAAAATA+AGG | - | chr2.4:655109-655128 | None:intergenic | 5.0% |
| !! | CAAAAATAAAAAAAAAATAA+GGG | - | chr2.4:655108-655127 | None:intergenic | 5.0% |
| !!! | ATTTTTTTTTTATTTTTGTT+TGG | + | chr2.4:655110-655129 | MS.gene067471:intron | 5.0% |
| ACGGCATAACCATAGCACCA+AGG | - | chr2.4:656735-656754 | None:intergenic | 50.0% | |
| ACGTTCAGTTCGCGGAATCA+AGG | + | chr2.4:656891-656910 | MS.gene067471:CDS | 50.0% | |
| CAATCGATGGCTGCCAATCT+TGG | + | chr2.4:655912-655931 | MS.gene067471:CDS | 50.0% | |
| CATGACATACTGCCCTGCAT+AGG | - | chr2.4:657414-657433 | None:intergenic | 50.0% | |
| CCACAATCTCTTCCTGCACT+CGG | + | chr2.4:656843-656862 | MS.gene067471:CDS | 50.0% | |
| GAAGGCTTGAGCTTGAGCAT+AGG | - | chr2.4:655823-655842 | None:intergenic | 50.0% | |
| GAGCATCAATGTGCTGAGTC+CGG | - | chr2.4:656430-656449 | None:intergenic | 50.0% | |
| GAGGAGTGGTACCAAAGCAA+AGG | - | chr2.4:658097-658116 | None:intergenic | 50.0% | |
| GCCAATCTTGGAGTGGTTAC+TGG | + | chr2.4:655924-655943 | MS.gene067471:CDS | 50.0% | |
| GCCCCAGGTTCTTCTAATTC+TGG | + | chr2.4:654961-654980 | MS.gene067471:CDS | 50.0% | |
| GGCATGGCAGTATATTTGGC+CGG | + | chr2.4:658577-658596 | MS.gene067471:CDS | 50.0% | |
| TCTGCTGGACTACTTCTCTG+AGG | - | chr2.4:658748-658767 | None:intergenic | 50.0% | |
| TTGATTCCGCGAACTGAACG+TGG | - | chr2.4:656892-656911 | None:intergenic | 50.0% | |
| ! | AAAGTACCAATGCCGAGTGC+AGG | - | chr2.4:656858-656877 | None:intergenic | 50.0% |
| ! | CTTGCGACATTCCTTTGGAG+GGG | - | chr2.4:655234-655253 | None:intergenic | 50.0% |
| !! | ACTCGGCATTGGTACTTTCC+AGG | + | chr2.4:656860-656879 | MS.gene067471:CDS | 50.0% |
| !! | CAGGTGCTGTTAGAGCCAAA+AGG | - | chr2.4:658645-658664 | None:intergenic | 50.0% |
| !! | CTAAAAGGGAGTGGTGCTAC+TGG | + | chr2.4:656694-656713 | MS.gene067471:CDS | 50.0% |
| !! | GCACCACTCCCTTTTAGTTG+CGG | - | chr2.4:656691-656710 | None:intergenic | 50.0% |
| !! | TGGATTGGTGTGCTACTGAC+CGG | + | chr2.4:656408-656427 | MS.gene067471:CDS | 50.0% |
| ATGGACGGAAACCCCTCCAA+AGG | + | chr2.4:655220-655239 | MS.gene067471:intron | 55.0% | |
| CCGAGTGCAGGAAGAGATTG+TGG | - | chr2.4:656846-656865 | None:intergenic | 55.0% | |
| GATGGCTGCCAATCTTGGAG+TGG | + | chr2.4:655917-655936 | MS.gene067471:CDS | 55.0% | |
| GCAGGAAGAGATTGTGGCTG+AGG | - | chr2.4:656840-656859 | None:intergenic | 55.0% | |
| GGCGTCAATAAGCGGAGCAT+TGG | - | chr2.4:655028-655047 | None:intergenic | 55.0% | |
| GTGCCGCAACTAAAAGGGAG+TGG | + | chr2.4:656685-656704 | MS.gene067471:CDS | 55.0% | |
| TCTCTTCCTGCACTCGGCAT+TGG | + | chr2.4:656849-656868 | MS.gene067471:CDS | 55.0% | |
| TGCAGGGCAGTATGTCATGC+AGG | + | chr2.4:657415-657434 | MS.gene067471:CDS | 55.0% | |
| TGGGATGTCACAGGCCACTA+TGG | - | chr2.4:656118-656137 | None:intergenic | 55.0% | |
| TTAAGTAGAGGCCGTGCACG+TGG | + | chr2.4:657895-657914 | MS.gene067471:intron | 55.0% | |
| !!! | GCGTGTTTTTGGGCTGAGCT+TGG | + | chr2.4:656619-656638 | MS.gene067471:CDS | 55.0% |
| GTGGCCTGTGACATCCCAGA+AGG | + | chr2.4:656120-656139 | MS.gene067471:CDS | 60.0% | |
| ! | CGGTCATTGGTGGCTCTGCT+GGG | + | chr2.4:657628-657647 | MS.gene067471:CDS | 60.0% |
| ! | GGTCATTGGTGGCTCTGCTG+GGG | + | chr2.4:657629-657648 | MS.gene067471:CDS | 60.0% |
| ! | TCAGTTTGGGGCCCCGTTAG+TGG | - | chr2.4:655186-655205 | None:intergenic | 60.0% |
| ! | ATTGGTGGCTCTGCTGGGGC+TGG | + | chr2.4:657633-657652 | MS.gene067471:CDS | 65.0% |
| ! | GCGGTCATTGGTGGCTCTGC+TGG | + | chr2.4:657627-657646 | MS.gene067471:CDS | 65.0% |
| ! | TTGGTGGCTCTGCTGGGGCT+GGG | + | chr2.4:657634-657653 | MS.gene067471:CDS | 65.0% |
| ! | GGGGCCCCGTTAGTGGACAG+TGG | - | chr2.4:655179-655198 | None:intergenic | 70.0% |
| ! | TGGTGGCTCTGCTGGGGCTG+GGG | + | chr2.4:657635-657654 | MS.gene067471:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 654955 | 658777 | 654955 | ID=MS.gene067471 |
| chr2.4 | mRNA | 654955 | 658777 | 654955 | ID=MS.gene067471.t1;Parent=MS.gene067471 |
| chr2.4 | exon | 654955 | 655077 | 654955 | ID=MS.gene067471.t1.exon1;Parent=MS.gene067471.t1 |
| chr2.4 | CDS | 654955 | 655077 | 654955 | ID=cds.MS.gene067471.t1;Parent=MS.gene067471.t1 |
| chr2.4 | exon | 655536 | 655614 | 655536 | ID=MS.gene067471.t1.exon2;Parent=MS.gene067471.t1 |
| chr2.4 | CDS | 655536 | 655614 | 655536 | ID=cds.MS.gene067471.t1;Parent=MS.gene067471.t1 |
| chr2.4 | exon | 655728 | 655768 | 655728 | ID=MS.gene067471.t1.exon3;Parent=MS.gene067471.t1 |
| chr2.4 | CDS | 655728 | 655768 | 655728 | ID=cds.MS.gene067471.t1;Parent=MS.gene067471.t1 |
| chr2.4 | exon | 655867 | 655945 | 655867 | ID=MS.gene067471.t1.exon4;Parent=MS.gene067471.t1 |
| chr2.4 | CDS | 655867 | 655945 | 655867 | ID=cds.MS.gene067471.t1;Parent=MS.gene067471.t1 |
| chr2.4 | exon | 656037 | 656141 | 656037 | ID=MS.gene067471.t1.exon5;Parent=MS.gene067471.t1 |
| chr2.4 | CDS | 656037 | 656141 | 656037 | ID=cds.MS.gene067471.t1;Parent=MS.gene067471.t1 |
| chr2.4 | exon | 656361 | 656470 | 656361 | ID=MS.gene067471.t1.exon6;Parent=MS.gene067471.t1 |
| chr2.4 | CDS | 656361 | 656470 | 656361 | ID=cds.MS.gene067471.t1;Parent=MS.gene067471.t1 |
| chr2.4 | exon | 656571 | 656752 | 656571 | ID=MS.gene067471.t1.exon7;Parent=MS.gene067471.t1 |
| chr2.4 | CDS | 656571 | 656752 | 656571 | ID=cds.MS.gene067471.t1;Parent=MS.gene067471.t1 |
| chr2.4 | exon | 656843 | 656912 | 656843 | ID=MS.gene067471.t1.exon8;Parent=MS.gene067471.t1 |
| chr2.4 | CDS | 656843 | 656912 | 656843 | ID=cds.MS.gene067471.t1;Parent=MS.gene067471.t1 |
| chr2.4 | exon | 657049 | 657222 | 657049 | ID=MS.gene067471.t1.exon9;Parent=MS.gene067471.t1 |
| chr2.4 | CDS | 657049 | 657222 | 657049 | ID=cds.MS.gene067471.t1;Parent=MS.gene067471.t1 |
| chr2.4 | exon | 657332 | 657436 | 657332 | ID=MS.gene067471.t1.exon10;Parent=MS.gene067471.t1 |
| chr2.4 | CDS | 657332 | 657436 | 657332 | ID=cds.MS.gene067471.t1;Parent=MS.gene067471.t1 |
| chr2.4 | exon | 657546 | 657677 | 657546 | ID=MS.gene067471.t1.exon11;Parent=MS.gene067471.t1 |
| chr2.4 | CDS | 657546 | 657677 | 657546 | ID=cds.MS.gene067471.t1;Parent=MS.gene067471.t1 |
| chr2.4 | exon | 658072 | 658167 | 658072 | ID=MS.gene067471.t1.exon12;Parent=MS.gene067471.t1 |
| chr2.4 | CDS | 658072 | 658167 | 658072 | ID=cds.MS.gene067471.t1;Parent=MS.gene067471.t1 |
| chr2.4 | exon | 658436 | 658777 | 658436 | ID=MS.gene067471.t1.exon13;Parent=MS.gene067471.t1 |
| chr2.4 | CDS | 658436 | 658777 | 658436 | ID=cds.MS.gene067471.t1;Parent=MS.gene067471.t1 |
| Gene Sequence |
| Protein sequence |
