AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene86256

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene86256.t1 MTR_8g101320 78.125 96 21 0 1 96 603 698 5.16e-52 176
MS.gene86256.t1 MTR_8g101300 77.083 96 22 0 1 96 631 726 2.11e-51 174
MS.gene86256.t1 MTR_3g109100 77.083 96 22 0 1 96 624 719 4.63e-50 171
MS.gene86256.t1 MTR_6g093030 75.000 96 24 0 1 96 633 728 7.89e-50 170
MS.gene86256.t1 MTR_2g105930 73.196 97 26 0 1 97 536 632 1.74e-48 165
MS.gene86256.t1 MTR_3g104660 74.747 99 25 0 1 99 572 670 2.67e-48 165
MS.gene86256.t1 MTR_2g105930 73.196 97 26 0 1 97 620 716 4.23e-48 165
MS.gene86256.t1 MTR_1g015050 71.875 96 27 0 1 96 578 673 1.10e-46 160
MS.gene86256.t1 MTR_1g009310 62.879 132 33 3 1 131 628 744 1.92e-44 155
MS.gene86256.t1 MTR_8g018830 65.625 96 33 0 1 96 583 678 1.03e-41 147
MS.gene86256.t1 MTR_2g099530 59.184 98 40 0 2 99 470 567 2.71e-39 139
MS.gene86256.t1 MTR_3g008270 50.515 97 48 0 2 98 605 701 7.65e-33 122
MS.gene86256.t1 MTR_3g008280 51.546 97 47 0 2 98 606 702 8.69e-33 122
MS.gene86256.t1 MTR_3g008280 51.546 97 47 0 2 98 614 710 9.98e-33 122
MS.gene86256.t1 MTR_0229s0010 63.750 80 26 2 53 131 1 78 8.85e-28 99.4
MS.gene86256.t1 MTR_7g077780 48.421 95 49 0 2 96 701 795 7.35e-27 105
MS.gene86256.t1 MTR_4g125930 46.000 100 53 1 5 104 572 670 4.21e-25 100
MS.gene86256.t1 MTR_4g125930 46.000 100 53 1 5 104 372 470 5.63e-25 99.8
MS.gene86256.t1 MTR_8g030690 42.105 95 53 1 4 96 540 634 3.17e-22 91.7
MS.gene86256.t1 MTR_2g096850 43.158 95 54 0 2 96 627 721 7.20e-21 87.8
MS.gene86256.t1 MTR_2g096850 43.158 95 54 0 2 96 476 570 7.56e-21 87.8
MS.gene86256.t1 MTR_1g100820 42.045 88 51 0 10 97 532 619 1.04e-16 75.9
MS.gene86256.t1 MTR_1g100820 42.045 88 51 0 10 97 530 617 1.05e-16 75.9
MS.gene86256.t1 MTR_3g062570 35.294 102 62 1 2 99 533 634 2.51e-15 72.0
MS.gene86256.t1 MTR_3g062570 35.294 102 62 1 2 99 669 770 2.57e-15 72.0
MS.gene86256.t1 MTR_3g062570 35.294 102 62 1 2 99 784 885 2.61e-15 72.0
MS.gene86256.t1 MTR_8g467150 36.190 105 57 2 2 96 608 712 5.46e-15 71.2
MS.gene86256.t1 MTR_7g074010 35.294 102 62 1 2 99 609 710 5.49e-15 71.2
MS.gene86256.t1 MTR_7g074010 35.294 102 62 1 2 99 743 844 5.58e-15 71.2
MS.gene86256.t1 MTR_7g074010 35.294 102 62 1 2 99 788 889 5.61e-15 71.2
MS.gene86256.t1 MTR_7g021570 35.294 102 62 1 2 99 789 890 9.18e-15 70.5
MS.gene86256.t1 MTR_5g058090 35.577 104 58 3 5 99 748 851 3.42e-14 68.9
MS.gene86256.t1 MTR_3g464080 35.345 116 62 2 4 106 667 782 3.52e-14 68.9
MS.gene86256.t1 MTR_5g014700 33.898 118 68 3 1 108 852 969 3.71e-14 68.9
MS.gene86256.t1 MTR_5g017080 28.000 150 96 3 2 141 327 474 4.15e-14 68.6
MS.gene86256.t1 MTR_2g098910 34.211 114 67 2 5 110 689 802 4.59e-14 68.6
MS.gene86256.t1 MTR_3g062590 33.333 102 64 1 2 99 786 887 5.80e-14 68.2
MS.gene86256.t1 MTR_5g034210 32.558 129 73 2 2 116 217 345 6.51e-14 67.8
MS.gene86256.t1 MTR_5g034210 32.558 129 73 2 2 116 224 352 6.52e-14 67.8
MS.gene86256.t1 MTR_5g034210 32.558 129 73 2 2 116 304 432 8.03e-14 67.8
MS.gene86256.t1 MTR_5g099130 34.862 109 60 2 2 99 259 367 8.14e-14 67.4
MS.gene86256.t1 MTR_1g100787 33.628 113 64 2 2 103 1153 1265 8.17e-14 67.8
MS.gene86256.t1 MTR_4g115630 35.833 120 65 3 2 109 377 496 8.67e-14 67.4
MS.gene86256.t1 MTR_5g099130 34.862 109 60 2 2 99 270 378 1.07e-13 67.4
MS.gene86256.t1 MTR_5g099130 34.862 109 60 2 2 99 266 374 1.10e-13 67.0
MS.gene86256.t1 MTR_1g027490 30.405 148 90 4 2 136 556 703 1.65e-13 67.0
MS.gene86256.t1 MTR_1g040073 32.381 105 61 3 2 96 592 696 1.78e-13 66.6
MS.gene86256.t1 MTR_7g109670 32.283 127 75 3 2 117 543 669 1.95e-13 66.6
MS.gene86256.t1 MTR_7g079350 29.464 112 69 2 2 103 521 632 3.10e-13 66.2
MS.gene86256.t1 MTR_8g014760 33.333 117 69 3 2 109 721 837 3.43e-13 65.9
MS.gene86256.t1 MTR_6g007690 36.000 100 54 3 6 96 230 328 3.88e-13 65.5
MS.gene86256.t1 MTR_4g095045 34.259 108 61 3 2 99 466 573 3.94e-13 65.9
MS.gene86256.t1 MTR_2g031530 31.250 112 67 2 2 103 555 666 4.40e-13 65.5
MS.gene86256.t1 MTR_8g014740 32.759 116 64 4 2 103 87 202 8.38e-13 63.5
MS.gene86256.t1 MTR_8g028115 31.624 117 71 2 2 109 81 197 9.32e-13 63.5
MS.gene86256.t1 MTR_4g092070 32.381 105 65 3 1 99 273 377 9.92e-13 64.3
MS.gene86256.t1 MTR_7g079320 29.508 122 73 3 2 110 514 635 1.21e-12 64.3
MS.gene86256.t1 MTR_1g040200 31.429 105 62 2 2 96 224 328 1.21e-12 63.9
MS.gene86256.t1 MTR_1g086870 35.849 106 57 3 2 96 449 554 1.22e-12 64.3
MS.gene86256.t1 MTR_1g110120 27.500 120 74 3 2 108 486 605 1.28e-12 64.3
MS.gene86256.t1 MTR_3g037690 29.565 115 71 2 5 109 94 208 1.65e-12 63.2
MS.gene86256.t1 MTR_8g028695 30.000 120 74 2 2 111 304 423 1.76e-12 63.9
MS.gene86256.t1 MTR_1g027670 29.375 160 92 5 2 144 213 368 1.90e-12 63.5
MS.gene86256.t1 MTR_4g067230 33.929 112 64 2 5 106 684 795 1.96e-12 63.9
MS.gene86256.t1 MTR_7g078730 32.381 105 61 2 2 96 321 425 2.01e-12 63.5
MS.gene86256.t1 MTR_5g035030 30.476 105 61 3 6 98 231 335 2.41e-12 63.2
MS.gene86256.t1 MTR_5g090100 33.051 118 68 2 1 107 843 960 2.55e-12 63.5
MS.gene86256.t1 MTR_4g097880 31.250 112 68 2 1 103 849 960 2.72e-12 63.5
MS.gene86256.t1 MTR_8g052490 29.565 115 71 2 5 109 227 341 2.82e-12 63.2
MS.gene86256.t1 MTR_8g461110 29.730 111 69 1 2 103 847 957 2.83e-12 63.5
MS.gene86256.t1 MTR_3g449390 31.624 117 70 1 1 107 869 985 2.93e-12 63.2
MS.gene86256.t1 MTR_2g005810 33.929 112 65 2 1 103 847 958 3.05e-12 63.2
MS.gene86256.t1 MTR_2g031520 29.167 120 75 2 2 111 541 660 3.26e-12 63.2
MS.gene86256.t1 MTR_2g073630 30.612 147 91 4 2 138 788 933 3.83e-12 63.2
MS.gene86256.t1 MTR_5g075650 31.373 102 66 1 2 99 780 881 3.93e-12 62.8
MS.gene86256.t1 MTR_8g052290 29.565 115 71 2 5 109 253 367 5.26e-12 62.4
MS.gene86256.t1 MTR_1g021642 28.188 149 94 3 6 142 521 668 5.84e-12 62.4
MS.gene86256.t1 MTR_8g015150 32.479 117 70 2 2 109 474 590 6.92e-12 62.0
MS.gene86256.t1 MTR_8g015150 32.479 117 70 2 2 109 719 835 7.23e-12 62.0
MS.gene86256.t1 MTR_2g103950 34.188 117 66 4 2 108 200 315 7.39e-12 62.0
MS.gene86256.t1 MTR_1g069340 34.615 104 57 3 2 94 512 615 7.47e-12 62.0
MS.gene86256.t1 MTR_8g028110 31.624 117 71 2 2 109 731 847 7.89e-12 62.0
MS.gene86256.t1 MTR_8g015040 32.479 117 70 3 2 109 776 892 8.17e-12 62.0
MS.gene86256.t1 MTR_8g052570 29.565 115 71 2 5 109 226 340 8.28e-12 61.6
MS.gene86256.t1 MTR_8g052517 29.565 115 71 2 5 109 226 340 8.28e-12 61.6
MS.gene86256.t1 MTR_2g039290 32.692 104 59 2 2 94 999 1102 8.87e-12 62.0
MS.gene86256.t1 MTR_8g461120 32.692 104 61 3 2 96 713 816 8.98e-12 62.0
MS.gene86256.t1 MTR_8g461120 32.692 104 61 3 2 96 738 841 9.01e-12 62.0
MS.gene86256.t1 MTR_2g039290 32.692 104 59 2 2 94 1233 1336 9.32e-12 62.0
MS.gene86256.t1 MTR_2g039290 32.692 104 59 2 2 94 1221 1324 1.01e-11 61.6
MS.gene86256.t1 MTR_8g052050 30.556 108 65 2 6 103 649 756 1.01e-11 61.6
MS.gene86256.t1 MTR_8g052170 30.435 115 70 2 5 109 200 314 1.03e-11 61.6
MS.gene86256.t1 MTR_1g027570 30.769 130 78 2 2 119 571 700 1.07e-11 61.6
MS.gene86256.t1 MTR_8g052200 30.556 108 65 2 6 103 627 734 1.18e-11 61.6
MS.gene86256.t1 MTR_8g442270 28.704 108 67 2 6 103 643 750 1.25e-11 61.6
MS.gene86256.t1 MTR_1g027580 30.769 130 78 2 2 119 571 700 1.30e-11 61.2
MS.gene86256.t1 MTR_2g082430 33.962 106 64 3 6 105 271 376 1.41e-11 61.2
MS.gene86256.t1 MTR_4g115120 33.019 106 60 2 2 96 278 383 1.64e-11 60.8
MS.gene86256.t1 MTR_8g052190 30.556 108 65 2 6 103 641 748 1.67e-11 61.2
MS.gene86256.t1 MTR_8g052190 30.556 108 65 2 6 103 642 749 1.67e-11 61.2
MS.gene86256.t1 MTR_8g015010 31.624 117 71 3 2 109 774 890 1.72e-11 61.2
MS.gene86256.t1 MTR_8g052060 30.556 108 65 2 6 103 606 713 1.73e-11 61.2
MS.gene86256.t1 MTR_8g052080 30.556 108 65 2 6 103 650 757 1.76e-11 61.2
MS.gene86256.t1 MTR_8g015200 32.203 118 71 3 1 109 700 817 1.78e-11 60.8
MS.gene86256.t1 MTR_8g442300 27.523 109 69 2 5 103 27 135 1.84e-11 59.3
MS.gene86256.t1 MTR_5g037410 32.500 120 68 3 2 108 498 617 1.89e-11 60.8
MS.gene86256.t1 MTR_5g047110 34.188 117 63 4 2 104 665 781 1.90e-11 60.8
MS.gene86256.t1 MTR_5g047060 34.188 117 63 4 2 104 681 797 1.92e-11 60.8
MS.gene86256.t1 MTR_3g007600 28.358 134 84 3 4 127 201 332 1.96e-11 60.8
MS.gene86256.t1 MTR_1g064630 31.532 111 67 2 2 103 208 318 2.02e-11 60.8
MS.gene86256.t1 MTR_4g123480 32.710 107 61 3 1 96 72 178 2.07e-11 59.3
MS.gene86256.t1 MTR_4g095042 32.407 108 63 3 2 99 657 764 2.14e-11 60.8
MS.gene86256.t1 MTR_8g442310 27.778 108 68 2 6 103 599 706 2.45e-11 60.5
MS.gene86256.t1 MTR_3g007650 28.030 132 83 3 6 127 689 818 2.55e-11 60.5
MS.gene86256.t1 MTR_4g069970 31.429 105 62 2 2 96 300 404 2.80e-11 60.5
MS.gene86256.t1 MTR_1g102190 27.778 108 68 2 2 99 207 314 2.80e-11 60.1
MS.gene86256.t1 MTR_6g044830 31.132 106 60 3 2 94 469 574 2.92e-11 60.5
MS.gene86256.t1 MTR_8g014970 29.915 117 73 2 2 109 490 606 2.98e-11 60.5
MS.gene86256.t1 MTR_8g051600 29.630 108 66 2 6 103 638 745 2.98e-11 60.5
MS.gene86256.t1 MTR_7g073660 30.556 108 65 2 2 99 701 808 3.08e-11 60.5
MS.gene86256.t1 MTR_8g052513 31.481 108 64 2 6 103 627 734 3.09e-11 60.5
MS.gene86256.t1 MTR_8g015100 31.624 117 71 3 2 109 422 538 3.25e-11 60.1
MS.gene86256.t1 MTR_8g070880 30.556 108 65 2 2 99 788 895 3.26e-11 60.5
MS.gene86256.t1 MTR_8g015100 31.624 117 71 3 2 109 639 755 3.41e-11 60.1
MS.gene86256.t1 MTR_8g078940 30.631 111 64 3 2 99 494 604 3.45e-11 60.1
MS.gene86256.t1 MTR_3g088785 33.036 112 64 4 2 103 582 692 3.67e-11 60.1
MS.gene86256.t1 MTR_8g445800 27.679 112 72 1 2 104 661 772 3.68e-11 60.1
MS.gene86256.t1 MTR_8g445800 27.679 112 72 1 2 104 714 825 3.70e-11 60.1
MS.gene86256.t1 MTR_8g445800 27.679 112 72 1 2 104 859 970 3.75e-11 60.1
MS.gene86256.t1 MTR_8g063300 31.429 105 60 3 6 98 228 332 4.02e-11 59.7
MS.gene86256.t1 MTR_2g011210 31.034 116 70 4 2 108 687 801 4.63e-11 59.7
MS.gene86256.t1 MTR_3g088760 27.049 122 78 2 2 112 580 701 4.66e-11 59.7
MS.gene86256.t1 MTR_8g051640 27.778 108 68 2 6 103 612 719 4.93e-11 59.7
MS.gene86256.t1 MTR_1g082580 32.576 132 72 4 2 116 312 443 4.97e-11 59.7
MS.gene86256.t1 MTR_3g069050 28.829 111 66 2 2 99 505 615 6.62e-11 59.3
MS.gene86256.t1 MTR_8g014930 30.769 117 72 3 2 109 690 806 6.80e-11 59.3
MS.gene86256.t1 MTR_8g014930 30.769 117 72 3 2 109 724 840 6.83e-11 59.3
MS.gene86256.t1 MTR_3g088640 29.752 121 75 2 2 112 568 688 7.26e-11 59.3
MS.gene86256.t1 MTR_5g045910 30.973 113 71 2 3 108 953 1065 7.32e-11 59.3
MS.gene86256.t1 MTR_5g047070 28.000 125 73 3 2 109 432 556 7.45e-11 59.3
MS.gene86256.t1 MTR_8g088410 36.036 111 57 4 2 98 238 348 7.58e-11 58.9
MS.gene86256.t1 MTR_3g007510 30.556 108 65 2 6 103 680 787 7.63e-11 59.3
MS.gene86256.t1 MTR_3g007510 30.556 108 65 2 6 103 681 788 7.63e-11 59.3
MS.gene86256.t1 MTR_3g007510 30.556 108 65 2 6 103 684 791 7.63e-11 59.3
MS.gene86256.t1 MTR_5g047120 28.000 125 73 3 2 109 673 797 7.83e-11 59.3
MS.gene86256.t1 MTR_8g442340 27.778 108 68 2 6 103 586 693 8.55e-11 58.9
MS.gene86256.t1 MTR_8g442370 27.778 108 68 2 6 103 633 740 8.61e-11 58.9
MS.gene86256.t1 MTR_3g007630 30.556 108 65 2 6 103 677 784 8.94e-11 58.9
MS.gene86256.t1 MTR_4g069970 29.134 127 80 2 2 118 300 426 8.96e-11 58.9
MS.gene86256.t1 MTR_4g107620 27.928 111 71 1 2 103 474 584 9.04e-11 58.9
MS.gene86256.t1 MTR_1g010250 30.159 126 72 4 2 113 455 578 9.27e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene86256.t1 AT2G24370 63.415 123 43 1 1 123 640 760 3.98e-50 171
MS.gene86256.t1 AT4G31230 72.917 96 26 0 1 96 528 623 9.33e-49 166
MS.gene86256.t1 AT5G26150 75.000 96 24 0 1 96 590 685 1.43e-48 166
MS.gene86256.t1 AT4G31230 72.917 96 26 0 1 96 627 722 1.49e-48 166
MS.gene86256.t1 AT5G26150 75.000 96 24 0 1 96 585 680 1.49e-48 166
MS.gene86256.t1 AT5G12000 63.866 119 42 1 1 118 497 615 1.99e-48 164
MS.gene86256.t1 AT5G12000 68.182 110 34 1 1 109 582 691 2.48e-48 165
MS.gene86256.t1 AT1G78940 71.875 96 27 0 1 96 536 631 3.65e-46 159
MS.gene86256.t1 AT1G78940 71.875 96 27 0 1 96 607 702 6.97e-46 159
MS.gene86256.t1 AT1G78940 71.875 96 27 0 1 96 607 702 7.21e-46 159
MS.gene86256.t1 AT2G07020 70.833 96 28 0 1 96 579 674 2.00e-45 157
MS.gene86256.t1 AT1G16760 70.833 96 28 0 1 96 609 704 2.60e-45 157
MS.gene86256.t1 AT1G16760 70.833 96 28 0 1 96 609 704 2.79e-45 157
MS.gene86256.t1 AT5G35380 63.934 122 42 1 1 122 574 693 2.88e-45 157
MS.gene86256.t1 AT1G17540 59.322 118 48 0 1 118 569 686 8.93e-45 155
MS.gene86256.t1 AT3G20200 58.475 118 44 1 1 113 612 729 3.60e-44 154
MS.gene86256.t1 AT3G20200 58.475 118 44 1 1 113 612 729 3.60e-44 154
MS.gene86256.t1 AT3G20200 58.475 118 44 1 1 113 612 729 3.92e-44 154
MS.gene86256.t1 AT3G20200 58.475 118 44 1 1 113 612 729 4.02e-44 154
MS.gene86256.t1 AT1G72760 63.918 97 35 0 1 97 551 647 1.20e-41 147
MS.gene86256.t1 AT1G72760 63.918 97 35 0 1 97 542 638 1.31e-41 146
MS.gene86256.t1 AT4G25160 53.922 102 45 2 2 102 642 742 3.85e-30 114
MS.gene86256.t1 AT5G61560 52.577 97 44 1 2 96 594 690 3.89e-30 114
MS.gene86256.t1 AT5G61560 52.577 97 44 1 2 96 615 711 3.95e-30 114
MS.gene86256.t1 AT5G61560 52.577 97 44 1 2 96 615 711 3.95e-30 114
MS.gene86256.t1 AT5G61560 52.577 97 44 1 2 96 596 692 4.09e-30 114
MS.gene86256.t1 AT5G61560 52.577 97 44 1 2 96 596 692 4.09e-30 114
MS.gene86256.t1 AT2G19410 54.348 92 42 0 5 96 627 718 1.24e-29 113
MS.gene86256.t1 AT2G19410 54.348 92 42 0 5 96 592 683 1.55e-29 112
MS.gene86256.t1 AT2G19410 54.348 92 42 0 5 96 606 697 1.62e-29 112
MS.gene86256.t1 AT5G57035 54.082 98 44 1 5 102 589 685 3.83e-29 111
MS.gene86256.t1 AT5G61550 47.959 98 50 1 2 98 651 748 1.70e-28 109
MS.gene86256.t1 AT5G61550 47.959 98 50 1 2 98 651 748 1.70e-28 109
MS.gene86256.t1 AT5G61550 47.959 98 50 1 2 98 651 748 1.70e-28 109
MS.gene86256.t1 AT5G61550 47.959 98 50 1 2 98 651 748 1.79e-28 109
MS.gene86256.t1 AT5G51270 50.000 104 48 2 2 102 609 711 4.86e-28 108
MS.gene86256.t1 AT5G51270 50.000 104 48 2 2 102 609 711 4.86e-28 108
MS.gene86256.t1 AT2G45910 44.211 95 53 0 2 96 638 732 1.04e-23 96.3
MS.gene86256.t1 AT2G45910 44.211 95 53 0 2 96 638 732 1.04e-23 96.3
MS.gene86256.t1 AT1G79670 33.333 117 68 2 2 108 543 659 2.56e-17 77.8
MS.gene86256.t1 AT1G79670 33.333 117 68 2 2 108 580 696 2.57e-17 77.8
MS.gene86256.t1 AT1G16150 32.479 117 69 2 2 108 583 699 9.89e-17 76.3
MS.gene86256.t1 AT3G49060 38.384 99 61 0 10 108 607 705 2.17e-16 75.1
MS.gene86256.t1 AT3G49060 38.384 99 61 0 10 108 617 715 2.38e-16 75.1
MS.gene86256.t1 AT3G49060 38.384 99 61 0 10 108 584 682 2.58e-16 75.1
MS.gene86256.t1 AT1G16130 31.624 117 70 2 2 108 575 691 4.00e-15 71.6
MS.gene86256.t1 AT5G59670 32.414 145 73 3 2 138 724 851 8.39e-15 70.5
MS.gene86256.t1 AT5G59670 32.414 145 73 3 2 138 724 851 8.39e-15 70.5
MS.gene86256.t1 AT1G07550 32.039 103 62 2 2 96 718 820 1.73e-14 69.7
MS.gene86256.t1 AT3G16030 32.710 107 60 2 5 99 567 673 2.50e-14 69.3
MS.gene86256.t1 AT3G16030 32.710 107 60 2 5 99 690 796 2.54e-14 69.3
MS.gene86256.t1 AT3G16030 32.710 107 60 2 5 99 711 817 2.55e-14 69.3
MS.gene86256.t1 AT5G59650 34.951 103 59 2 2 96 739 841 2.55e-14 69.3
MS.gene86256.t1 AT5G59650 34.951 103 59 2 2 96 747 849 2.56e-14 69.3
MS.gene86256.t1 AT1G10620 33.036 112 61 2 2 99 528 639 3.05e-14 68.9
MS.gene86256.t1 AT3G59420 34.545 110 64 2 5 106 679 788 6.34e-14 68.2
MS.gene86256.t1 AT2G28960 35.922 103 58 2 2 96 601 703 7.11e-14 67.8
MS.gene86256.t1 AT2G28960 35.922 103 58 2 2 96 733 835 7.98e-14 67.8
MS.gene86256.t1 AT1G21245 31.387 137 75 6 6 124 4 139 9.25e-14 65.1
MS.gene86256.t1 AT4G29990 32.203 118 69 3 2 110 732 847 1.08e-13 67.4
MS.gene86256.t1 AT1G70460 33.929 112 60 2 2 99 511 622 1.32e-13 67.0
MS.gene86256.t1 AT1G51790 34.951 103 59 2 2 96 735 837 1.55e-13 67.0
MS.gene86256.t1 AT1G51790 34.951 103 59 2 2 96 735 837 1.55e-13 67.0
MS.gene86256.t1 AT1G51790 34.951 103 59 2 2 96 787 889 1.56e-13 67.0
MS.gene86256.t1 AT4G01330 32.773 119 69 3 2 110 322 439 1.87e-13 66.6
MS.gene86256.t1 AT4G29180 29.221 154 75 4 1 144 735 864 1.98e-13 66.6
MS.gene86256.t1 AT4G29180 29.221 154 75 4 1 144 736 865 1.98e-13 66.6
MS.gene86256.t1 AT4G29180 29.221 154 75 4 1 144 738 867 1.98e-13 66.6
MS.gene86256.t1 AT4G01330 33.065 124 71 4 2 115 322 443 2.00e-13 66.6
MS.gene86256.t1 AT5G65700 30.645 124 77 2 1 115 854 977 2.12e-13 66.6
MS.gene86256.t1 AT5G65700 30.645 124 77 2 1 115 854 977 2.12e-13 66.6
MS.gene86256.t1 AT4G01330 32.773 119 69 3 2 110 322 439 2.55e-13 66.2
MS.gene86256.t1 AT4G02010 30.469 128 78 2 2 118 543 670 3.22e-13 66.2
MS.gene86256.t1 AT2G28990 35.922 103 58 2 2 96 737 839 3.30e-13 66.2
MS.gene86256.t1 AT2G28990 35.922 103 58 2 2 96 737 839 3.30e-13 66.2
MS.gene86256.t1 AT1G17910 29.565 115 70 2 2 105 613 727 3.64e-13 65.9
MS.gene86256.t1 AT1G51880 34.951 103 59 2 2 96 725 827 4.07e-13 65.9
MS.gene86256.t1 AT1G51880 34.951 103 59 2 2 96 743 845 4.08e-13 65.9
MS.gene86256.t1 AT1G51880 34.951 103 59 2 2 96 751 853 4.09e-13 65.9
MS.gene86256.t1 AT5G59660 35.000 100 60 2 2 96 623 722 4.87e-13 65.5
MS.gene86256.t1 AT5G59660 35.000 100 60 2 2 96 645 744 4.88e-13 65.5
MS.gene86256.t1 AT5G59660 35.000 100 60 2 2 96 648 747 4.88e-13 65.5
MS.gene86256.t1 AT1G16260 31.624 117 70 2 2 108 540 656 5.06e-13 65.5
MS.gene86256.t1 AT1G16260 31.624 117 70 2 2 108 549 665 5.07e-13 65.5
MS.gene86256.t1 AT1G16260 31.624 117 70 2 2 108 549 665 5.07e-13 65.5
MS.gene86256.t1 AT2G23200 35.577 104 57 2 6 99 651 754 5.63e-13 65.5
MS.gene86256.t1 AT4G02630 30.508 118 71 3 2 109 323 439 5.99e-13 65.1
MS.gene86256.t1 AT1G21270 31.538 130 70 6 2 115 563 689 6.78e-13 65.1
MS.gene86256.t1 AT5G37450 34.314 102 63 1 2 99 818 919 6.87e-13 65.1
MS.gene86256.t1 AT5G37450 34.314 102 63 1 2 99 770 871 6.91e-13 65.1
MS.gene86256.t1 AT1G70450 33.036 112 61 2 2 99 208 319 6.92e-13 65.1
MS.gene86256.t1 AT5G37450 34.314 102 63 1 2 99 591 692 7.57e-13 65.1
MS.gene86256.t1 AT5G37450 34.314 102 63 1 2 99 794 895 7.77e-13 65.1
MS.gene86256.t1 AT1G23540 33.036 112 61 2 2 99 529 640 7.82e-13 65.1
MS.gene86256.t1 AT5G01950 32.353 102 65 1 2 99 705 806 7.92e-13 65.1
MS.gene86256.t1 AT1G06840 33.333 102 64 1 2 99 789 890 8.00e-13 65.1
MS.gene86256.t1 AT5G01950 32.353 102 65 1 2 99 790 891 9.33e-13 64.7
MS.gene86256.t1 AT5G01950 32.353 102 65 1 2 99 790 891 9.33e-13 64.7
MS.gene86256.t1 AT5G01950 32.353 102 65 1 2 99 790 891 9.33e-13 64.7
MS.gene86256.t1 AT5G01950 32.353 102 65 1 2 99 790 891 9.33e-13 64.7
MS.gene86256.t1 AT5G01950 32.353 102 65 1 2 99 795 896 9.34e-13 64.7
MS.gene86256.t1 AT1G19390 32.692 104 59 2 2 94 610 713 9.78e-13 64.7
MS.gene86256.t1 AT1G24030 34.286 105 57 3 6 98 139 243 1.03e-12 63.9
MS.gene86256.t1 AT2G42960 32.143 112 66 2 2 103 343 454 1.04e-12 64.7
MS.gene86256.t1 AT2G42960 32.143 112 66 2 2 103 343 454 1.04e-12 64.7
MS.gene86256.t1 AT2G42960 32.143 112 66 2 2 103 343 454 1.04e-12 64.7
MS.gene86256.t1 AT2G42960 32.143 112 66 2 2 103 343 454 1.04e-12 64.7
MS.gene86256.t1 AT4G31110 29.565 115 70 2 2 105 591 705 1.10e-12 64.7
MS.gene86256.t1 AT4G31110 29.565 115 70 2 2 105 613 727 1.10e-12 64.7
MS.gene86256.t1 AT1G01540 31.667 120 72 2 2 111 314 433 1.12e-12 64.3
MS.gene86256.t1 AT4G31100 29.565 115 70 2 2 105 604 718 1.14e-12 64.7
MS.gene86256.t1 AT1G51860 33.981 103 60 2 2 96 599 701 1.20e-12 64.3
MS.gene86256.t1 AT1G51860 33.981 103 60 2 2 96 743 845 1.23e-12 64.3
MS.gene86256.t1 AT1G24030 34.286 105 57 3 6 98 176 280 1.29e-12 63.9
MS.gene86256.t1 AT1G53420 35.593 118 65 3 2 109 784 900 1.51e-12 64.3
MS.gene86256.t1 AT5G38990 34.259 108 61 2 2 99 689 796 1.53e-12 64.3
MS.gene86256.t1 AT4G34500 32.710 107 58 3 2 96 307 411 1.73e-12 63.9
MS.gene86256.t1 AT1G24030 34.286 105 57 3 6 98 244 348 1.81e-12 63.5
MS.gene86256.t1 AT1G24030 34.286 105 57 3 6 98 230 334 1.83e-12 63.5
MS.gene86256.t1 AT2G11520 34.127 126 71 4 1 114 385 510 2.20e-12 63.5
MS.gene86256.t1 AT5G39000 32.407 108 63 2 2 99 682 789 2.38e-12 63.5
MS.gene86256.t1 AT4G34440 30.556 108 62 2 2 96 470 577 2.42e-12 63.5
MS.gene86256.t1 AT4G34440 30.556 108 62 2 2 96 470 577 2.42e-12 63.5
MS.gene86256.t1 AT5G11410 34.234 111 52 3 2 96 126 231 3.09e-12 62.4
MS.gene86256.t1 AT1G51870 31.818 110 67 2 2 103 690 799 3.39e-12 63.2
MS.gene86256.t1 AT1G51870 31.818 110 67 2 2 103 742 851 3.41e-12 63.2
MS.gene86256.t1 AT1G67520 29.907 107 63 2 5 99 616 722 3.63e-12 63.2
MS.gene86256.t1 AT2G19190 30.769 104 63 2 2 96 732 835 3.68e-12 63.2
MS.gene86256.t1 AT1G67520 29.630 108 64 2 4 99 450 557 3.94e-12 62.8
MS.gene86256.t1 AT1G67520 29.630 108 64 2 4 99 450 557 3.94e-12 62.8
MS.gene86256.t1 AT4G20270 29.915 117 72 1 1 107 871 987 3.98e-12 63.2
MS.gene86256.t1 AT1G67520 29.630 108 64 2 4 99 421 528 4.26e-12 62.8
MS.gene86256.t1 AT1G67520 29.907 107 63 2 5 99 666 772 4.26e-12 62.8
MS.gene86256.t1 AT1G67520 29.907 107 63 2 5 99 659 765 4.38e-12 62.8
MS.gene86256.t1 AT5G15080 33.945 109 61 2 2 99 310 418 4.42e-12 62.8
MS.gene86256.t1 AT1G21240 31.496 127 74 5 2 115 313 439 4.70e-12 62.8
MS.gene86256.t1 AT5G11410 34.234 111 52 3 2 96 216 321 4.77e-12 62.4
MS.gene86256.t1 AT3G59110 30.833 120 73 2 2 111 350 469 4.86e-12 62.8
MS.gene86256.t1 AT3G53590 34.343 99 61 1 2 96 785 883 4.90e-12 62.8
MS.gene86256.t1 AT1G21240 31.496 127 74 5 2 115 574 700 5.05e-12 62.8
MS.gene86256.t1 AT3G57720 29.167 120 71 3 6 111 238 357 5.16e-12 62.4
MS.gene86256.t1 AT2G28970 34.951 103 59 2 2 96 604 706 5.85e-12 62.4
MS.gene86256.t1 AT2G28970 34.951 103 59 2 2 96 639 741 5.88e-12 62.4
MS.gene86256.t1 AT1G21230 29.134 127 77 5 2 115 567 693 6.55e-12 62.4
MS.gene86256.t1 AT3G09010 30.435 115 71 1 2 107 206 320 6.95e-12 62.0
MS.gene86256.t1 AT2G19210 31.132 106 62 2 2 96 734 839 6.95e-12 62.4
MS.gene86256.t1 AT5G47070 30.645 124 72 3 2 114 253 373 7.07e-12 62.0
MS.gene86256.t1 AT3G57710 32.710 107 59 2 6 99 230 336 7.34e-12 62.0
MS.gene86256.t1 AT3G28690 33.028 109 62 2 2 99 294 402 7.53e-12 62.0
MS.gene86256.t1 AT5G18500 31.250 112 67 3 2 103 326 437 8.48e-12 62.0
MS.gene86256.t1 AT5G18500 31.250 112 67 3 2 103 326 437 8.48e-12 62.0
MS.gene86256.t1 AT5G18500 31.250 112 67 3 2 103 326 437 8.48e-12 62.0
MS.gene86256.t1 AT5G18500 31.250 112 67 3 2 103 326 437 8.48e-12 62.0
MS.gene86256.t1 AT5G18500 31.250 112 67 3 2 103 326 437 8.48e-12 62.0
MS.gene86256.t1 AT5G18500 31.250 112 67 3 2 103 326 437 8.48e-12 62.0
MS.gene86256.t1 AT4G39110 34.259 108 61 2 2 99 684 791 9.28e-12 62.0
MS.gene86256.t1 AT3G25490 29.921 127 76 5 2 115 267 393 9.81e-12 61.6
MS.gene86256.t1 AT1G51830 30.909 110 68 2 2 103 546 655 1.03e-11 61.6
MS.gene86256.t1 AT1G51830 30.909 110 68 2 2 103 553 662 1.03e-11 61.6
MS.gene86256.t1 AT3G46340 30.645 124 75 3 2 114 746 869 1.06e-11 61.6
MS.gene86256.t1 AT3G01300 33.945 109 61 2 2 99 304 412 1.15e-11 61.6
MS.gene86256.t1 AT3G28690 33.028 109 62 2 2 99 194 302 1.19e-11 61.2
MS.gene86256.t1 AT5G62710 28.829 111 70 1 2 103 472 582 1.30e-11 61.6
MS.gene86256.t1 AT1G49100 32.075 106 64 2 2 99 741 846 1.42e-11 61.2
MS.gene86256.t1 AT3G46420 29.054 148 93 4 2 137 691 838 1.43e-11 61.2
MS.gene86256.t1 AT5G62710 28.829 111 70 1 2 103 438 548 1.45e-11 61.2
MS.gene86256.t1 AT1G75820 26.496 117 72 1 1 103 851 967 1.58e-11 61.2
MS.gene86256.t1 AT1G51850 29.605 152 82 3 2 145 718 852 1.61e-11 61.2
MS.gene86256.t1 AT1G51850 29.605 152 82 3 2 145 738 872 1.61e-11 61.2
MS.gene86256.t1 AT3G28690 33.028 109 62 2 2 99 243 351 1.68e-11 60.8
MS.gene86256.t1 AT2G29000 32.039 103 62 2 2 96 725 827 1.84e-11 61.2
MS.gene86256.t1 AT3G45920 33.010 103 61 2 2 96 41 143 2.26e-11 59.3
MS.gene86256.t1 AT5G15730 34.234 111 69 4 1 107 267 377 2.32e-11 60.5
MS.gene86256.t1 AT1G51890 31.731 104 63 2 1 96 456 559 2.70e-11 60.5
MS.gene86256.t1 AT5G38560 32.110 109 60 2 2 96 499 607 2.73e-11 60.5
MS.gene86256.t1 AT1G51890 31.731 104 63 2 1 96 664 767 2.82e-11 60.5
MS.gene86256.t1 AT1G54820 33.028 109 62 2 2 99 316 424 2.82e-11 60.5
MS.gene86256.t1 AT1G51890 31.731 104 63 2 1 96 728 831 2.84e-11 60.5
MS.gene86256.t1 AT1G51890 31.731 104 63 2 1 96 750 853 2.85e-11 60.5
MS.gene86256.t1 AT1G51805 31.818 110 67 2 2 103 713 822 2.92e-11 60.5
MS.gene86256.t1 AT1G51805 31.818 110 67 2 2 103 737 846 2.93e-11 60.5
MS.gene86256.t1 AT5G07280 33.028 109 62 3 2 99 1077 1185 3.21e-11 60.5
MS.gene86256.t1 AT1G16120 28.205 117 74 2 2 108 588 704 3.75e-11 60.1
MS.gene86256.t1 AT1G67720 28.814 118 74 2 4 111 767 884 3.81e-11 60.1
MS.gene86256.t1 AT1G09440 30.476 105 63 2 2 96 317 421 3.90e-11 60.1
MS.gene86256.t1 AT1G09440 30.476 105 63 2 2 96 317 421 3.90e-11 60.1
MS.gene86256.t1 AT5G15730 34.234 111 69 4 1 107 269 379 4.47e-11 59.7
MS.gene86256.t1 AT5G15730 34.234 111 69 4 1 107 269 379 4.47e-11 59.7
MS.gene86256.t1 AT1G65790 29.464 112 65 2 6 103 683 794 4.62e-11 60.1
MS.gene86256.t1 AT2G17220 32.110 109 63 2 2 99 255 363 4.85e-11 59.7
MS.gene86256.t1 AT2G17220 32.110 109 63 2 2 99 254 362 5.24e-11 59.7
MS.gene86256.t1 AT1G65800 29.464 112 65 2 6 103 687 798 5.66e-11 59.7
MS.gene86256.t1 AT4G21380 29.310 116 68 3 6 108 690 804 5.66e-11 59.7
MS.gene86256.t1 AT3G46330 33.981 103 60 2 2 96 703 805 5.83e-11 59.7
MS.gene86256.t1 AT3G46330 33.981 103 60 2 2 96 727 829 5.85e-11 59.7
MS.gene86256.t1 AT5G56790 30.357 112 68 2 2 103 549 660 5.94e-11 59.7
MS.gene86256.t1 AT2G04300 30.400 125 76 3 2 115 701 825 6.61e-11 59.3
MS.gene86256.t1 AT1G07560 32.039 103 62 2 2 96 727 829 6.63e-11 59.3
MS.gene86256.t1 AT2G04300 30.400 125 76 3 2 115 742 866 6.64e-11 59.3
MS.gene86256.t1 AT1G21210 28.346 127 78 5 2 115 569 695 7.23e-11 59.3
MS.gene86256.t1 AT3G46370 33.663 101 59 2 2 94 647 747 9.55e-11 58.9
MS.gene86256.t1 AT3G46370 33.663 101 59 2 2 94 647 747 9.55e-11 58.9

Find 41 sgRNAs with CRISPR-Local

Find 48 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTTCTTCACTTCCTTATTC+AGG 0.203502 1.4:-10527470 MS.gene86256:CDS
AGTAATTTACACTTCATAAT+TGG 0.204093 1.4:+10527393 None:intergenic
GAGACTTGGCTCTGAGTAGA+AGG 0.376136 1.4:+10527628 None:intergenic
CTTGTGCTATCCCCTGAATA+AGG 0.392494 1.4:+10527458 None:intergenic
GGTTTGCTCAGATGGCTATA+AGG 0.414504 1.4:-10527773 MS.gene86256:CDS
GGCTATGGGGTTTGCTCAGA+TGG 0.435310 1.4:-10527781 MS.gene86256:CDS
ATCTATATAACAAAATGTTC+CGG 0.444619 1.4:+10527989 None:intergenic
GTTCTTCACTTCCTTATTCA+GGG 0.446397 1.4:-10527469 MS.gene86256:CDS
AACCCCATAGCCTCTTCAAC+TGG 0.452405 1.4:+10527792 None:intergenic
CATAACCTCTTACCAAGATC+AGG 0.469670 1.4:+10527723 None:intergenic
TTGGCCAGTTGAAGAGGCTA+TGG 0.473090 1.4:-10527796 MS.gene86256:CDS
GGGAACATTTAGTGAGATGT+TGG 0.474548 1.4:-10527835 MS.gene86256:CDS
TGTATCAAGCCCTCTTTGAT+AGG 0.474602 1.4:-10527432 MS.gene86256:CDS
ACTGGCCAATCTGTCAGTCT+TGG 0.486141 1.4:+10527810 None:intergenic
TACCAACAGACAGGAATGTT+GGG 0.487581 1.4:-10527960 MS.gene86256:CDS
ATTCCTGTCTGTTGGTACTC+AGG 0.491283 1.4:+10527966 None:intergenic
TAAGGTGTGCTGAGTTAAGA+AGG 0.500093 1.4:-10527755 MS.gene86256:CDS
CTCCCAACATTCCTGTCTGT+TGG 0.502079 1.4:+10527958 None:intergenic
AGGAAAGATAGACCTGATCT+TGG 0.504433 1.4:-10527735 MS.gene86256:intron
TTTGACAGCAAGACCACCAA+TGG 0.511805 1.4:-10527892 MS.gene86256:CDS
TGGATCCAAGACTGACAGAT+TGG 0.524868 1.4:-10527815 MS.gene86256:CDS
ATTTACACTTCATAATTGGA+TGG 0.528604 1.4:+10527397 None:intergenic
TGGCCAGTTGAAGAGGCTAT+GGG 0.530876 1.4:-10527795 MS.gene86256:CDS
TATCGAATGACGTCAGCTGC+CGG 0.536547 1.4:-10528008 None:intergenic
AAATCTGATATTTACTCACT+AGG 0.536663 1.4:-10527933 MS.gene86256:CDS
AATCTGATATTTACTCACTA+GGG 0.545428 1.4:-10527932 MS.gene86256:CDS
TTGACAGCAAGACCACCAAT+GGG 0.548929 1.4:-10527891 MS.gene86256:CDS
TTCTCTTGACCTATCAAAGA+GGG 0.557847 1.4:+10527423 None:intergenic
GTACCAACAGACAGGAATGT+TGG 0.559116 1.4:-10527961 MS.gene86256:CDS
GACAGATTGGCCAGTTGAAG+AGG 0.563539 1.4:-10527802 MS.gene86256:CDS
TTCTTCACTTCCTTATTCAG+GGG 0.569283 1.4:-10527468 MS.gene86256:CDS
GATCCTGAGTACCAACAGAC+AGG 0.591898 1.4:-10527969 MS.gene86256:CDS
GAGCCAAGTCTCTCTTCAGA+TGG 0.600572 1.4:-10527617 MS.gene86256:intron
GTTGGTAGAGCTATTGAGAA+GGG 0.601322 1.4:-10527855 MS.gene86256:CDS
TGTTGGTAGAGCTATTGAGA+AGG 0.616167 1.4:-10527856 MS.gene86256:CDS
ATACCATCTGAAGAGAGACT+TGG 0.618304 1.4:+10527614 None:intergenic
TGATGTGTCAATCCCATTGG+TGG 0.626567 1.4:+10527879 None:intergenic
ACATGATGTGTCAATCCCAT+TGG 0.630164 1.4:+10527876 None:intergenic
CTTCTCTTGACCTATCAAAG+AGG 0.638479 1.4:+10527422 None:intergenic
GGCCAGTTGAAGAGGCTATG+GGG 0.651327 1.4:-10527794 MS.gene86256:CDS
ATGGGATTGACACATCATGT+TGG 0.673505 1.4:-10527873 MS.gene86256:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATCCACTAAAAATATAA+TGG + chr1.4:10527748-10527767 None:intergenic 15.0%
!! ATCTATATAACAAAATGTTC+CGG + chr1.4:10527415-10527434 None:intergenic 20.0%
! AAATCTGATATTTACTCACT+AGG - chr1.4:10527468-10527487 MS.gene86256:CDS 25.0%
! AATCTGATATTTACTCACTA+GGG - chr1.4:10527469-10527488 MS.gene86256:CDS 25.0%
! TCAATCAAACCAACTATTAA+CGG + chr1.4:10527863-10527882 None:intergenic 25.0%
!! AGTTTAAAACCGTTAATAGT+TGG - chr1.4:10527851-10527870 MS.gene86256:CDS 25.0%
!!! GATCACCATTATATTTTTAG+TGG - chr1.4:10527740-10527759 MS.gene86256:CDS 25.0%
AGTTGAAACAAATGTAACTG+TGG - chr1.4:10527882-10527901 MS.gene86256:CDS 30.0%
TCTCTTAACCTATTAAGTTC+AGG + chr1.4:10527704-10527723 None:intergenic 30.0%
AGGTTATGCCTGAACTTAAT+AGG - chr1.4:10527693-10527712 MS.gene86256:intron 35.0%
AGTTCTTCACTTCCTTATTC+AGG - chr1.4:10527931-10527950 MS.gene86256:CDS 35.0%
GTTCTTCACTTCCTTATTCA+GGG - chr1.4:10527932-10527951 MS.gene86256:CDS 35.0%
TTCTCTTGACCTATCAAAGA+GGG + chr1.4:10527981-10528000 None:intergenic 35.0%
TTCTTCACTTCCTTATTCAG+GGG - chr1.4:10527933-10527952 MS.gene86256:CDS 35.0%
ACATGATGTGTCAATCCCAT+TGG + chr1.4:10527528-10527547 None:intergenic 40.0%
AGGAAAGATAGACCTGATCT+TGG - chr1.4:10527666-10527685 MS.gene86256:intron 40.0%
ATACCATCTGAAGAGAGACT+TGG + chr1.4:10527790-10527809 None:intergenic 40.0%
ATAGACCTGATCTTGGTAAG+AGG - chr1.4:10527673-10527692 MS.gene86256:intron 40.0%
ATGGGATTGACACATCATGT+TGG - chr1.4:10527528-10527547 MS.gene86256:intron 40.0%
CATAACCTCTTACCAAGATC+AGG + chr1.4:10527681-10527700 None:intergenic 40.0%
CTTCTCTTGACCTATCAAAG+AGG + chr1.4:10527982-10528001 None:intergenic 40.0%
GGGAACATTTAGTGAGATGT+TGG - chr1.4:10527566-10527585 MS.gene86256:intron 40.0%
TAAGGTGTGCTGAGTTAAGA+AGG - chr1.4:10527646-10527665 MS.gene86256:intron 40.0%
TACCAACAGACAGGAATGTT+GGG - chr1.4:10527441-10527460 MS.gene86256:CDS 40.0%
TGTATCAAGCCCTCTTTGAT+AGG - chr1.4:10527969-10527988 MS.gene86256:CDS 40.0%
! GTGATGATGTTGTTGTAGGA+TGG - chr1.4:10527904-10527923 MS.gene86256:CDS 40.0%
! GTTGGTAGAGCTATTGAGAA+GGG - chr1.4:10527546-10527565 MS.gene86256:intron 40.0%
! TGTGGTGATGATGTTGTTGT+AGG - chr1.4:10527900-10527919 MS.gene86256:CDS 40.0%
! TGTTGGTAGAGCTATTGAGA+AGG - chr1.4:10527545-10527564 MS.gene86256:intron 40.0%
ATTCCTGTCTGTTGGTACTC+AGG + chr1.4:10527438-10527457 None:intergenic 45.0%
CTTGTGCTATCCCCTGAATA+AGG + chr1.4:10527946-10527965 None:intergenic 45.0%
GTACCAACAGACAGGAATGT+TGG - chr1.4:10527440-10527459 MS.gene86256:CDS 45.0%
TGATGTGTCAATCCCATTGG+TGG + chr1.4:10527525-10527544 None:intergenic 45.0%
TGGATCCAAGACTGACAGAT+TGG - chr1.4:10527586-10527605 MS.gene86256:intron 45.0%
TTGACAGCAAGACCACCAAT+GGG - chr1.4:10527510-10527529 MS.gene86256:intron 45.0%
TTTGACAGCAAGACCACCAA+TGG - chr1.4:10527509-10527528 MS.gene86256:intron 45.0%
! GGTTTGCTCAGATGGCTATA+AGG - chr1.4:10527628-10527647 MS.gene86256:CDS 45.0%
AACCCCATAGCCTCTTCAAC+TGG + chr1.4:10527612-10527631 None:intergenic 50.0%
ACTGGCCAATCTGTCAGTCT+TGG + chr1.4:10527594-10527613 None:intergenic 50.0%
CTCCCAACATTCCTGTCTGT+TGG + chr1.4:10527446-10527465 None:intergenic 50.0%
GAGCCAAGTCTCTCTTCAGA+TGG - chr1.4:10527784-10527803 MS.gene86256:CDS 50.0%
GATCCTGAGTACCAACAGAC+AGG - chr1.4:10527432-10527451 MS.gene86256:CDS 50.0%
TGGCCAGTTGAAGAGGCTAT+GGG - chr1.4:10527606-10527625 MS.gene86256:intron 50.0%
TTGGCCAGTTGAAGAGGCTA+TGG - chr1.4:10527605-10527624 MS.gene86256:intron 50.0%
! GACAGATTGGCCAGTTGAAG+AGG - chr1.4:10527599-10527618 MS.gene86256:intron 50.0%
!! GAGACTTGGCTCTGAGTAGA+AGG + chr1.4:10527776-10527795 None:intergenic 50.0%
GGCCAGTTGAAGAGGCTATG+GGG - chr1.4:10527607-10527626 MS.gene86256:intron 55.0%
! GGCTATGGGGTTTGCTCAGA+TGG - chr1.4:10527620-10527639 MS.gene86256:CDS 55.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 10527399 10528024 10527399 ID=MS.gene86256
chr1.4 mRNA 10527399 10528024 10527399 ID=MS.gene86256.t1;Parent=MS.gene86256
chr1.4 exon 10527736 10528024 10527736 ID=MS.gene86256.t1.exon1;Parent=MS.gene86256.t1
chr1.4 CDS 10527736 10528024 10527736 ID=cds.MS.gene86256.t1;Parent=MS.gene86256.t1
chr1.4 exon 10527618 10527663 10527618 ID=MS.gene86256.t1.exon2;Parent=MS.gene86256.t1
chr1.4 CDS 10527618 10527663 10527618 ID=cds.MS.gene86256.t1;Parent=MS.gene86256.t1
chr1.4 exon 10527399 10527501 10527399 ID=MS.gene86256.t1.exon3;Parent=MS.gene86256.t1
chr1.4 CDS 10527399 10527501 10527399 ID=cds.MS.gene86256.t1;Parent=MS.gene86256.t1
Gene Sequence

>MS.gene86256

ATGACGTCAGCTGCCGGAACATTTTGTTATATAGATCCTGAGTACCAACAGACAGGAATGTTGGGAGTGAAATCTGATATTTACTCACTAGGGATAATTTTCTTGCAAATTTTGACAGCAAGACCACCAATGGGATTGACACATCATGTTGGTAGAGCTATTGAGAAGGGAACATTTAGTGAGATGTTGGATCCAAGACTGACAGATTGGCCAGTTGAAGAGGCTATGGGGTTTGCTCAGATGGCTATAAGGTGTGCTGAGTTAAGAAGGAAAGATAGACCTGATCTTGGTAAGAGGTTATGCCTGAACTTAATAGGTTAAGAGAACTTGCTGAAAATAATGATCACCATTATATTTTTAGTGGATTTACAAGTCCTTCTACTCAGAGCCAAGTCTCTCTTCAGATGGTATGTTTCTTTCTCTAATAATTATCATGTTTATGTGAACGTTGAAGTTTAAAACCGTTAATAGTTGGTTTGATTGAGTTGAAACAAATGTAACTGTGGTGATGATGTTGTTGTAGGATGGATCAAGTTCTTCACTTCCTTATTCAGGGGATAGCACAAGAAATGTATCAAGCCCTCTTTGATAGGTCAAGAGAAGATCCATCCAATTATGAAGTGTAA
Protein sequence

>MS.gene86256.t1

MTSAAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQILTARPPMGLTHHVGRAIEKGTFSEMLDPRLTDWPVEEAMGFAQMAIRCAELRRKDRPDLVDLQVLLLRAKSLFRWMDQVLHFLIQGIAQEMYQALFDRSREDPSNYEV