Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059459.t1 | RHN76790.1 | 80.4 | 531 | 81 | 2 | 17 | 524 | 20 | 550 | 1.10E-224 | 789.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059459.t1 | Q9FKG6 | 36.5 | 548 | 300 | 10 | 18 | 523 | 96 | 637 | 3.4e-68 | 260.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059459.t1 | A0A396JF31 | 80.4 | 531 | 81 | 2 | 17 | 524 | 20 | 550 | 8.2e-225 | 789.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050026 | MS.gene059459 | 0.823751 | 1.17E-53 | -1.69E-46 |
| MS.gene052447 | MS.gene059459 | 0.803013 | 4.27E-49 | -1.69E-46 |
| MS.gene053512 | MS.gene059459 | 0.806152 | 9.45E-50 | -1.69E-46 |
| MS.gene054291 | MS.gene059459 | -0.807832 | 4.17E-50 | -1.69E-46 |
| MS.gene05435 | MS.gene059459 | 0.802972 | 4.35E-49 | -1.69E-46 |
| MS.gene056174 | MS.gene059459 | 0.805791 | 1.13E-49 | -1.69E-46 |
| MS.gene058515 | MS.gene059459 | 0.811152 | 8.07E-51 | -1.69E-46 |
| MS.gene05925 | MS.gene059459 | 0.812833 | 3.47E-51 | -1.69E-46 |
| MS.gene059458 | MS.gene059459 | 0.911233 | 7.67E-83 | -1.69E-46 |
| MS.gene059459 | MS.gene059460 | 0.924598 | 5.69E-90 | -1.69E-46 |
| MS.gene059459 | MS.gene059584 | 0.819684 | 1.02E-52 | -1.69E-46 |
| MS.gene059459 | MS.gene059625 | 0.814776 | 1.30E-51 | -1.69E-46 |
| MS.gene059459 | MS.gene06269 | 0.830862 | 2.31E-55 | -1.69E-46 |
| MS.gene059459 | MS.gene063846 | 0.80092 | 1.15E-48 | -1.69E-46 |
| MS.gene059459 | MS.gene064321 | 0.809892 | 1.51E-50 | -1.69E-46 |
| MS.gene059459 | MS.gene064618 | 0.813405 | 2.60E-51 | -1.69E-46 |
| MS.gene059459 | MS.gene064718 | 0.849484 | 3.14E-60 | -1.69E-46 |
| MS.gene059459 | MS.gene065039 | 0.827685 | 1.36E-54 | -1.69E-46 |
| MS.gene059459 | MS.gene066313 | 0.803329 | 3.67E-49 | -1.69E-46 |
| MS.gene059459 | MS.gene06633 | 0.804283 | 2.33E-49 | -1.69E-46 |
| MS.gene059459 | MS.gene067208 | 0.812056 | 5.14E-51 | -1.69E-46 |
| MS.gene059459 | MS.gene067932 | 0.820032 | 8.50E-53 | -1.69E-46 |
| MS.gene059459 | MS.gene068010 | 0.800285 | 1.55E-48 | -1.69E-46 |
| MS.gene059459 | MS.gene068012 | 0.814245 | 1.70E-51 | -1.69E-46 |
| MS.gene059459 | MS.gene069956 | 0.809843 | 1.55E-50 | -1.69E-46 |
| MS.gene059459 | MS.gene070582 | 0.822756 | 2.00E-53 | -1.69E-46 |
| MS.gene059459 | MS.gene070818 | 0.824217 | 9.10E-54 | -1.69E-46 |
| MS.gene059459 | MS.gene071058 | 0.803057 | 4.18E-49 | -1.69E-46 |
| MS.gene059459 | MS.gene071441 | 0.816302 | 5.93E-52 | -1.69E-46 |
| MS.gene059459 | MS.gene071442 | 0.823073 | 1.69E-53 | -1.69E-46 |
| MS.gene059459 | MS.gene071444 | 0.817725 | 2.84E-52 | -1.69E-46 |
| MS.gene059459 | MS.gene07342 | 0.820509 | 6.61E-53 | -1.69E-46 |
| MS.gene059459 | MS.gene07394 | 0.811122 | 8.20E-51 | -1.69E-46 |
| MS.gene059459 | MS.gene23408 | 0.804161 | 2.47E-49 | -1.69E-46 |
| MS.gene059459 | MS.gene24211 | 0.816637 | 4.99E-52 | -1.69E-46 |
| MS.gene059459 | MS.gene24885 | 0.812452 | 4.21E-51 | -1.69E-46 |
| MS.gene059459 | MS.gene26062 | 0.807498 | 4.91E-50 | -1.69E-46 |
| MS.gene059459 | MS.gene27054 | 0.807043 | 6.13E-50 | -1.69E-46 |
| MS.gene059459 | MS.gene30073 | 0.814724 | 1.33E-51 | -1.69E-46 |
| MS.gene059459 | MS.gene30580 | 0.816687 | 4.86E-52 | -1.69E-46 |
| MS.gene059459 | MS.gene32262 | 0.803179 | 3.94E-49 | -1.69E-46 |
| MS.gene059459 | MS.gene34251 | 0.812895 | 3.37E-51 | -1.69E-46 |
| MS.gene059459 | MS.gene37612 | 0.805623 | 1.22E-49 | -1.69E-46 |
| MS.gene059459 | MS.gene37926 | 0.813823 | 2.11E-51 | -1.69E-46 |
| MS.gene059459 | MS.gene38976 | 0.802073 | 6.67E-49 | -1.69E-46 |
| MS.gene059459 | MS.gene47552 | 0.819095 | 1.39E-52 | -1.69E-46 |
| MS.gene059459 | MS.gene47943 | 0.822791 | 1.96E-53 | -1.69E-46 |
| MS.gene059459 | MS.gene50493 | 0.811721 | 6.08E-51 | -1.69E-46 |
| MS.gene059459 | MS.gene50865 | 0.822647 | 2.12E-53 | -1.69E-46 |
| MS.gene059459 | MS.gene50875 | 0.828702 | 7.76E-55 | -1.69E-46 |
| MS.gene059459 | MS.gene52525 | 0.838151 | 3.41E-57 | -1.69E-46 |
| MS.gene059459 | MS.gene52671 | 0.808457 | 3.07E-50 | -1.69E-46 |
| MS.gene059459 | MS.gene53191 | 0.803171 | 3.96E-49 | -1.69E-46 |
| MS.gene059459 | MS.gene53827 | 0.827229 | 1.76E-54 | -1.69E-46 |
| MS.gene059459 | MS.gene54017 | 0.947677 | 4.22E-106 | -1.69E-46 |
| MS.gene059459 | MS.gene54287 | 0.926275 | 5.86E-91 | -1.69E-46 |
| MS.gene059459 | MS.gene54288 | 0.94002 | 4.76E-100 | -1.69E-46 |
| MS.gene059459 | MS.gene54921 | 0.816291 | 5.96E-52 | -1.69E-46 |
| MS.gene059459 | MS.gene57103 | 0.805314 | 1.42E-49 | -1.69E-46 |
| MS.gene059459 | MS.gene59780 | 0.821663 | 3.58E-53 | -1.69E-46 |
| MS.gene059459 | MS.gene61898 | 0.803915 | 2.78E-49 | -1.69E-46 |
| MS.gene059459 | MS.gene62748 | 0.80523 | 1.48E-49 | -1.69E-46 |
| MS.gene059459 | MS.gene63897 | 0.80099 | 1.11E-48 | -1.69E-46 |
| MS.gene059459 | MS.gene64249 | 0.81698 | 4.18E-52 | -1.69E-46 |
| MS.gene059459 | MS.gene64567 | 0.815228 | 1.03E-51 | -1.69E-46 |
| MS.gene059459 | MS.gene66077 | 0.820375 | 7.09E-53 | -1.69E-46 |
| MS.gene059459 | MS.gene68441 | 0.813252 | 2.81E-51 | -1.69E-46 |
| MS.gene059459 | MS.gene68999 | 0.804325 | 2.28E-49 | -1.69E-46 |
| MS.gene059459 | MS.gene73014 | 0.807301 | 5.40E-50 | -1.69E-46 |
| MS.gene059459 | MS.gene73707 | 0.813559 | 2.41E-51 | -1.69E-46 |
| MS.gene059459 | MS.gene75887 | 0.801655 | 8.13E-49 | -1.69E-46 |
| MS.gene059459 | MS.gene75963 | 0.801106 | 1.05E-48 | -1.69E-46 |
| MS.gene059459 | MS.gene77015 | 0.805611 | 1.23E-49 | -1.69E-46 |
| MS.gene059459 | MS.gene77220 | 0.817745 | 2.81E-52 | -1.69E-46 |
| MS.gene059459 | MS.gene77370 | 0.8082 | 3.48E-50 | -1.69E-46 |
| MS.gene059459 | MS.gene78647 | 0.832003 | 1.21E-55 | -1.69E-46 |
| MS.gene059459 | MS.gene79127 | 0.812231 | 4.70E-51 | -1.69E-46 |
| MS.gene059459 | MS.gene80427 | 0.803473 | 3.43E-49 | -1.69E-46 |
| MS.gene059459 | MS.gene80853 | 0.821212 | 4.55E-53 | -1.69E-46 |
| MS.gene059459 | MS.gene80877 | 0.808104 | 3.65E-50 | -1.69E-46 |
| MS.gene059459 | MS.gene81047 | 0.812332 | 4.47E-51 | -1.69E-46 |
| MS.gene059459 | MS.gene81140 | 0.808499 | 3.01E-50 | -1.69E-46 |
| MS.gene059459 | MS.gene81193 | 0.810464 | 1.14E-50 | -1.69E-46 |
| MS.gene059459 | MS.gene82962 | 0.805974 | 1.03E-49 | -1.69E-46 |
| MS.gene059459 | MS.gene83166 | 0.802177 | 6.35E-49 | -1.69E-46 |
| MS.gene059459 | MS.gene83623 | 0.80189 | 7.27E-49 | -1.69E-46 |
| MS.gene059459 | MS.gene84994 | 0.841769 | 3.89E-58 | -1.69E-46 |
| MS.gene059459 | MS.gene85071 | 0.802017 | 6.85E-49 | -1.69E-46 |
| MS.gene059459 | MS.gene85527 | 0.805813 | 1.11E-49 | -1.69E-46 |
| MS.gene059459 | MS.gene86156 | 0.801325 | 9.50E-49 | -1.69E-46 |
| MS.gene059459 | MS.gene86255 | 0.937886 | 1.67E-98 | -1.69E-46 |
| MS.gene059459 | MS.gene86256 | 0.872625 | 2.75E-67 | -1.69E-46 |
| MS.gene059459 | MS.gene86258 | 0.939635 | 9.12E-100 | -1.69E-46 |
| MS.gene059459 | MS.gene88533 | 0.822631 | 2.14E-53 | -1.69E-46 |
| MS.gene059459 | MS.gene88548 | 0.822126 | 2.80E-53 | -1.69E-46 |
| MS.gene059459 | MS.gene89726 | 0.818737 | 1.68E-52 | -1.69E-46 |
| MS.gene059459 | MS.gene90651 | 0.818782 | 1.64E-52 | -1.69E-46 |
| MS.gene059459 | MS.gene91008 | 0.814388 | 1.58E-51 | -1.69E-46 |
| MS.gene059459 | MS.gene91451 | 0.806661 | 7.38E-50 | -1.69E-46 |
| MS.gene059459 | MS.gene91996 | 0.806557 | 7.77E-50 | -1.69E-46 |
| MS.gene059459 | MS.gene92567 | 0.803753 | 3.00E-49 | -1.69E-46 |
| MS.gene059459 | MS.gene94001 | 0.809416 | 1.91E-50 | -1.69E-46 |
| MS.gene059459 | MS.gene96078 | 0.802042 | 6.77E-49 | -1.69E-46 |
| MS.gene059459 | MS.gene96613 | 0.808215 | 3.45E-50 | -1.69E-46 |
| MS.gene059459 | MS.gene97534 | 0.81255 | 4.01E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 122 sgRNAs with CRISPR-Local
Find 219 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTGTGAGTGCTTCTTTAC+AGG | 0.151575 | 1.4:-10497904 | None:intergenic |
| CTTCTTCTAATTTCCATCTT+TGG | 0.173618 | 1.4:-10498036 | None:intergenic |
| GCAATTGAGCATTTGGTTCT+AGG | 0.189630 | 1.4:+10495378 | MS.gene059459:CDS |
| GCAAGATGTTTGCCGGTTTA+AGG | 0.207578 | 1.4:-10499063 | None:intergenic |
| TTTAAAATTGCAGCTGAAAT+AGG | 0.219421 | 1.4:+10498986 | MS.gene059459:CDS |
| CGCGCACAAAAGACGCGATA+TGG | 0.274810 | 1.4:-10495103 | None:intergenic |
| AGCTTTGAGTCAAACAATTA+TGG | 0.281142 | 1.4:+10497079 | MS.gene059459:CDS |
| AAAGAAAAGTAGTGGATTCT+TGG | 0.309455 | 1.4:+10498235 | MS.gene059459:CDS |
| TGAAATGAGAAGACTGAAAT+TGG | 0.311394 | 1.4:+10497848 | MS.gene059459:CDS |
| TCAATCAGCAATTGAGCATT+TGG | 0.318952 | 1.4:+10495371 | MS.gene059459:CDS |
| CGGTCAAGCAAGATGTTTGC+CGG | 0.327735 | 1.4:-10499070 | None:intergenic |
| GGAAGAAGGTCTATTGATAT+TGG | 0.341670 | 1.4:+10497100 | MS.gene059459:CDS |
| TATGGACGGAAAATTTCTTT+TGG | 0.354931 | 1.4:-10495085 | None:intergenic |
| AGTATATTCAATTAATGCTT+TGG | 0.359907 | 1.4:-10495346 | None:intergenic |
| CTAGTGGCTCAGGTTTAGTT+TGG | 0.360773 | 1.4:-10499030 | None:intergenic |
| GCACATGGCGAACGGAAGTT+TGG | 0.365351 | 1.4:+10498910 | MS.gene059459:CDS |
| TAAACAAGGCAGCCGTATTC+CGG | 0.369155 | 1.4:-10498884 | None:intergenic |
| GCTACTGGCACACGAGGTTC+TGG | 0.370652 | 1.4:-10495973 | None:intergenic |
| ACCTTCTATACCTCACATCT+TGG | 0.375413 | 1.4:-10498263 | None:intergenic |
| TCTCCATATGACCTATCATT+TGG | 0.377873 | 1.4:-10496896 | None:intergenic |
| TGCATTGGCTGTAGCAGAAA+TGG | 0.379336 | 1.4:+10498096 | MS.gene059459:CDS |
| CTTTAACTGCGACAGGAGTA+TGG | 0.380864 | 1.4:-10498383 | None:intergenic |
| AAGATTGGAGAAGGTGGTTA+TGG | 0.387056 | 1.4:+10498336 | MS.gene059459:CDS |
| TTCGCTGAGTCACTTAAGAT+TGG | 0.387509 | 1.4:+10498321 | MS.gene059459:CDS |
| AAAGATTAGTGATGTTGGTT+TGG | 0.398685 | 1.4:+10499105 | MS.gene059459:CDS |
| GTGGCTCAGGTTTAGTTTGG+TGG | 0.399698 | 1.4:-10499027 | None:intergenic |
| GACCTTCCTTGTTGTGCATC+AGG | 0.411227 | 1.4:-10498414 | None:intergenic |
| ATTCCAACAACTGTATCAAA+AGG | 0.421576 | 1.4:+10495817 | MS.gene059459:CDS |
| ATTAGAAGAAGAGAGGAGAT+TGG | 0.422286 | 1.4:+10498048 | MS.gene059459:CDS |
| TCTTTCTCATTTGATAGTGA+TGG | 0.425484 | 1.4:+10497139 | MS.gene059459:CDS |
| CCCTCAAATGACTTCCTCTC+AGG | 0.426079 | 1.4:-10496106 | None:intergenic |
| GCGAATAAACGATCTGTACT+TGG | 0.426324 | 1.4:-10496968 | None:intergenic |
| TCTAGAAGGCATTTATAAAC+AGG | 0.426929 | 1.4:-10498360 | None:intergenic |
| ACAAAAGATATGTCACCTTC+TGG | 0.427770 | 1.4:-10496929 | None:intergenic |
| AAGATGGGATGGAATCATTC+AGG | 0.436918 | 1.4:+10496146 | MS.gene059459:CDS |
| TATCTACCTTTAGTTGCTAC+TGG | 0.446338 | 1.4:-10495988 | None:intergenic |
| ACAGTATATATTGTTGGTAA+AGG | 0.447863 | 1.4:+10495856 | MS.gene059459:CDS |
| AGTCAAACAATTATGGAAGA+AGG | 0.447897 | 1.4:+10497086 | MS.gene059459:CDS |
| ACCAAGATGTGAGGTATAGA+AGG | 0.448907 | 1.4:+10498262 | MS.gene059459:CDS |
| TTGAGGTATTAAGTTGCATA+AGG | 0.449307 | 1.4:+10498828 | MS.gene059459:CDS |
| CGACAGGAGTATGGTCTAGA+AGG | 0.449880 | 1.4:-10498374 | None:intergenic |
| CGTCCAAATGATAGGTCATA+TGG | 0.454121 | 1.4:+10496893 | MS.gene059459:CDS |
| CCTAGGAGGAGAACCATGTT+TGG | 0.455194 | 1.4:-10498854 | None:intergenic |
| AACCTTAGCTGCCAAGGTAG+TGG | 0.460718 | 1.4:-10498965 | None:intergenic |
| AGAGGAGATTGGAGGAAGCA+AGG | 0.469616 | 1.4:+10498059 | MS.gene059459:CDS |
| CCAAACATGGTTCTCCTCCT+AGG | 0.471266 | 1.4:+10498854 | MS.gene059459:CDS |
| CCTGAGAGGAAGTCATTTGA+GGG | 0.471329 | 1.4:+10496106 | MS.gene059459:CDS |
| TCTCTATGTACTAGTGGCTC+AGG | 0.472238 | 1.4:-10499040 | None:intergenic |
| TTCCAACAACTGTATCAAAA+GGG | 0.478467 | 1.4:+10495818 | MS.gene059459:CDS |
| ACCCACTACCTTGGCAGCTA+AGG | 0.482705 | 1.4:+10498963 | MS.gene059459:CDS |
| CATTGTCTGCTACTGATGGC+GGG | 0.482880 | 1.4:-10499140 | None:intergenic |
| CTAGGAGACGTCCAAATGAT+AGG | 0.483797 | 1.4:+10496885 | MS.gene059459:CDS |
| CGTATTCCGGACAGGCTCCT+AGG | 0.484833 | 1.4:-10498871 | None:intergenic |
| AATGAGAAAGATGAGTGATC+AGG | 0.490375 | 1.4:-10497127 | None:intergenic |
| AGAAGAGAAAAGAAAAGTAG+TGG | 0.501185 | 1.4:+10498227 | MS.gene059459:CDS |
| GTCGCAAAGATTAGTGATGT+TGG | 0.501942 | 1.4:+10499100 | MS.gene059459:CDS |
| CGGAGAACTTTAACTGCGAC+AGG | 0.504843 | 1.4:-10498390 | None:intergenic |
| CAACTTAGTCAATCTAGTGT+AGG | 0.507179 | 1.4:+10495940 | MS.gene059459:CDS |
| CTAGGAGCCTGTCCGGAATA+CGG | 0.515301 | 1.4:+10498872 | MS.gene059459:CDS |
| GGCTGTAGCAGAAATGGAAA+AGG | 0.519595 | 1.4:+10498102 | MS.gene059459:CDS |
| GAGATTGGAGGAAGCAAGGA+TGG | 0.519698 | 1.4:+10498063 | MS.gene059459:CDS |
| TCTCCTCCTAGGAGCCTGTC+CGG | 0.521340 | 1.4:+10498865 | MS.gene059459:CDS |
| ACCTGAGAGGAAGTCATTTG+AGG | 0.522835 | 1.4:+10496105 | MS.gene059459:CDS |
| AGAAGAAGAGAGGAGATTGG+AGG | 0.523850 | 1.4:+10498051 | MS.gene059459:CDS |
| GATGGAAATTAGAAGAAGAG+AGG | 0.526538 | 1.4:+10498041 | MS.gene059459:CDS |
| TAATCTTTGCGACGTAGTTG+CGG | 0.528387 | 1.4:-10499090 | None:intergenic |
| AACTTAGTCAATCTAGTGTA+GGG | 0.529775 | 1.4:+10495941 | MS.gene059459:CDS |
| AGGCTGTAGAACTCCAAAGA+TGG | 0.530746 | 1.4:+10498023 | MS.gene059459:intron |
| ACTATATGACAGCCTAGGGT+TGG | 0.539645 | 1.4:-10497035 | None:intergenic |
| GTATAGAAGGTATTCAATTG+AGG | 0.542017 | 1.4:+10498275 | MS.gene059459:CDS |
| TCATATAGTTCTGATACTGA+TGG | 0.544531 | 1.4:+10497049 | MS.gene059459:CDS |
| ATTGAGCAGTGTTCAGTGGT+GGG | 0.546462 | 1.4:+10495042 | MS.gene059459:CDS |
| CTGCCTTGTTTATGAGCACA+TGG | 0.550252 | 1.4:+10498895 | MS.gene059459:CDS |
| ACCTTAGCTGCCAAGGTAGT+GGG | 0.552221 | 1.4:-10498964 | None:intergenic |
| TCAGAACTATATGACAGCCT+AGG | 0.552705 | 1.4:-10497040 | None:intergenic |
| TTTGGACGTCTCCTAGTGAA+TGG | 0.558124 | 1.4:-10496878 | None:intergenic |
| GCTCAGGTTTAGTTTGGTGG+AGG | 0.558359 | 1.4:-10499024 | None:intergenic |
| CCATCTTGTGATCTACGTGT+TGG | 0.564056 | 1.4:-10496130 | None:intergenic |
| GAAACACTCACCCACTACCT+TGG | 0.565536 | 1.4:+10498954 | MS.gene059459:CDS |
| ACATTGTCTGCTACTGATGG+CGG | 0.566010 | 1.4:-10499141 | None:intergenic |
| TATTGAGCAGTGTTCAGTGG+TGG | 0.567523 | 1.4:+10495041 | MS.gene059459:CDS |
| TTCTTCTTCTGCATCAAATG+TGG | 0.567640 | 1.4:+10497165 | MS.gene059459:CDS |
| TTCCTTGTTGTGCATCAGGA+CGG | 0.568622 | 1.4:-10498410 | None:intergenic |
| AGTACATAGAGACCTTAAAC+CGG | 0.571348 | 1.4:+10499051 | MS.gene059459:CDS |
| AAGGCAGCCGTATTCCGGAC+AGG | 0.573094 | 1.4:-10498879 | None:intergenic |
| TTAAGGTCTCTATGTACTAG+TGG | 0.573774 | 1.4:-10499046 | None:intergenic |
| GATGGCTGAAGAATCTGCAT+TGG | 0.576543 | 1.4:+10498081 | MS.gene059459:CDS |
| ACTGATCTGAATTGTAGTTG+TGG | 0.576685 | 1.4:-10497003 | None:intergenic |
| GTTTATGAGCACATGGCGAA+CGG | 0.580967 | 1.4:+10498902 | MS.gene059459:CDS |
| ATTGTCTGCTACTGATGGCG+GGG | 0.582896 | 1.4:-10499139 | None:intergenic |
| CGTGTGCCAGTAGCAACTAA+AGG | 0.584846 | 1.4:+10495982 | MS.gene059459:CDS |
| CAGAACTATATGACAGCCTA+GGG | 0.586560 | 1.4:-10497039 | None:intergenic |
| CATTATTGAGCAGTGTTCAG+TGG | 0.587142 | 1.4:+10495038 | MS.gene059459:CDS |
| AGCACTCACAGCACAGCAGA+AGG | 0.590737 | 1.4:+10497914 | MS.gene059459:CDS |
| CTCCGTCCTGATGCACAACA+AGG | 0.595620 | 1.4:+10498408 | MS.gene059459:CDS |
| GAGTCACTTAAGATTGGAGA+AGG | 0.595941 | 1.4:+10498327 | MS.gene059459:CDS |
| GATTGTAGAGGTGAAAATGC+AGG | 0.596107 | 1.4:-10495916 | None:intergenic |
| ACGTAGATCACAAGATGGGA+TGG | 0.598384 | 1.4:+10496135 | MS.gene059459:CDS |
| TGACTAAGTTGAGATTGTAG+AGG | 0.598773 | 1.4:-10495928 | None:intergenic |
| GTCACATTGTCTGCTACTGA+TGG | 0.602131 | 1.4:-10499144 | None:intergenic |
| ATTGCAGCTGAAATAGGCAC+AGG | 0.603026 | 1.4:+10498992 | MS.gene059459:CDS |
| TCACTTAAGATTGGAGAAGG+TGG | 0.604555 | 1.4:+10498330 | MS.gene059459:CDS |
| TTGCATAAGGCATCCAAACA+TGG | 0.606259 | 1.4:+10498841 | MS.gene059459:CDS |
| CCAACACGTAGATCACAAGA+TGG | 0.611497 | 1.4:+10496130 | MS.gene059459:CDS |
| ATTGGAGCTAAAGCAAACAA+TGG | 0.611500 | 1.4:+10497866 | MS.gene059459:CDS |
| TCCAACAACTGTATCAAAAG+GGG | 0.616048 | 1.4:+10495819 | MS.gene059459:CDS |
| TCGCCATGTGCTCATAAACA+AGG | 0.618885 | 1.4:-10498898 | None:intergenic |
| GTCCTGATGCACAACAAGGA+AGG | 0.619203 | 1.4:+10498412 | MS.gene059459:CDS |
| CACAAAAGACGCGATATGGA+CGG | 0.622512 | 1.4:-10495099 | None:intergenic |
| GGAGAACTTTCTATGCCAGA+AGG | 0.629667 | 1.4:+10496914 | MS.gene059459:CDS |
| TGTTTGATAGGTACACTGCA+AGG | 0.636280 | 1.4:+10495296 | MS.gene059459:intron |
| GTGACAGGTCACCATTCACT+AGG | 0.639260 | 1.4:+10496867 | MS.gene059459:intron |
| CAACACGTAGATCACAAGAT+GGG | 0.639809 | 1.4:+10496131 | MS.gene059459:CDS |
| TTAGTTGCTACTGGCACACG+AGG | 0.659938 | 1.4:-10495979 | None:intergenic |
| AAGGACATTGTAGTAGAACA+TGG | 0.661359 | 1.4:+10495315 | MS.gene059459:CDS |
| GCTGCAAGTAAAGGATGATG+TGG | 0.662833 | 1.4:+10497821 | MS.gene059459:intron |
| AAGGTCACAGTTTCAACGAG+AGG | 0.663965 | 1.4:+10498431 | MS.gene059459:CDS |
| ATTCCGGACAGGCTCCTAGG+AGG | 0.664682 | 1.4:-10498868 | None:intergenic |
| CTTGGACAAACCAAGATGTG+AGG | 0.668711 | 1.4:+10498253 | MS.gene059459:CDS |
| TGTTTGTATTAGCACCTGAG+AGG | 0.669859 | 1.4:+10496092 | MS.gene059459:intron |
| GCAAGTAAAGGATGATGTGG+AGG | 0.689241 | 1.4:+10497824 | MS.gene059459:intron |
| CTGAGAGGAAGTCATTTGAG+GGG | 0.701797 | 1.4:+10496107 | MS.gene059459:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATAGTTTTTGTTTTTTTT+AGG | - | chr1.4:10496696-10496715 | None:intergenic | 10.0% |
| !! | AAGAATTATCTTATTGAAAA+AGG | + | chr1.4:10497245-10497264 | MS.gene059459:intron | 15.0% |
| !! | TTACTAAAAATTTATGTTTG+AGG | + | chr1.4:10495496-10495515 | MS.gene059459:intron | 15.0% |
| !! | TTCAATTGAAAATATATAGA+AGG | - | chr1.4:10496408-10496427 | None:intergenic | 15.0% |
| !!! | ATTTTTAGTAACAAAGTATT+AGG | - | chr1.4:10495487-10495506 | None:intergenic | 15.0% |
| !!! | GAAATGCTATTTTTTTAATA+TGG | + | chr1.4:10497307-10497326 | MS.gene059459:intron | 15.0% |
| !!! | TAGTTAATTCAACTTTTTTA+TGG | + | chr1.4:10496826-10496845 | MS.gene059459:intron | 15.0% |
| !!! | TTTTTATGGTATATCTAAAA+TGG | + | chr1.4:10496840-10496859 | MS.gene059459:intron | 15.0% |
| !! | AATATTGATATTACATGTCT+TGG | + | chr1.4:10495709-10495728 | MS.gene059459:intron | 20.0% |
| !! | AGTATATTCAATTAATGCTT+TGG | - | chr1.4:10495349-10495368 | None:intergenic | 20.0% |
| !! | ATATATACTGTACAAAAATC+TGG | - | chr1.4:10495847-10495866 | None:intergenic | 20.0% |
| !! | TAATAATTGATGTGCAAATA+AGG | - | chr1.4:10497955-10497974 | None:intergenic | 20.0% |
| !! | TTCAATTGAAAATAGCATTT+AGG | + | chr1.4:10496418-10496437 | MS.gene059459:intron | 20.0% |
| !!! | ACCTCTAAAGTATATAAATA+AGG | - | chr1.4:10498746-10498765 | None:intergenic | 20.0% |
| !!! | ATCTGTTTATTTTTGAACTA+GGG | + | chr1.4:10498703-10498722 | MS.gene059459:intron | 20.0% |
| !!! | TAGTTTTGTTCAATGATAAA+TGG | + | chr1.4:10497718-10497737 | MS.gene059459:intron | 20.0% |
| !!! | TATCTGTTTATTTTTGAACT+AGG | + | chr1.4:10498702-10498721 | MS.gene059459:intron | 20.0% |
| !!! | TCCTTATTTATATACTTTAG+AGG | + | chr1.4:10498742-10498761 | MS.gene059459:intron | 20.0% |
| !!! | TCTCTTTTTATTTGTTTGAT+AGG | + | chr1.4:10495284-10495303 | MS.gene059459:intron | 20.0% |
| !!! | TTGTCAAAAAAAAGTATGTA+TGG | + | chr1.4:10496356-10496375 | MS.gene059459:intron | 20.0% |
| !!! | TTTTGTACAGTATATATTGT+TGG | + | chr1.4:10495850-10495869 | MS.gene059459:CDS | 20.0% |
| !!! | TTTTTAATATGGTTTCCTTA+AGG | + | chr1.4:10497318-10497337 | MS.gene059459:intron | 20.0% |
| !!! | TTTTTAGGAAAAATGTCAAT+AGG | - | chr1.4:10496681-10496700 | None:intergenic | 20.0% |
| ! | ACCAAGAATGATAAAAAAGA+AGG | - | chr1.4:10496540-10496559 | None:intergenic | 25.0% |
| ! | AGTAATCTATTGACATAGAT+CGG | - | chr1.4:10497686-10497705 | None:intergenic | 25.0% |
| ! | ATATATGCTTAACATAAGAC+AGG | - | chr1.4:10497756-10497775 | None:intergenic | 25.0% |
| ! | ATCATGAAGATTTGTCAAAT+GGG | + | chr1.4:10495528-10495547 | MS.gene059459:intron | 25.0% |
| ! | ATGAAATTATTGTGCATCAT+AGG | + | chr1.4:10498003-10498022 | MS.gene059459:intron | 25.0% |
| ! | CAACAGACCATTAATAAAAA+TGG | - | chr1.4:10497465-10497484 | None:intergenic | 25.0% |
| ! | CCAAGAATGATAAAAAAGAA+GGG | - | chr1.4:10496539-10496558 | None:intergenic | 25.0% |
| ! | CTGAAAGAAATATAAGAAGT+AGG | + | chr1.4:10496618-10496637 | MS.gene059459:intron | 25.0% |
| ! | GTGATATATTTATGACACAA+CGG | + | chr1.4:10497513-10497532 | MS.gene059459:intron | 25.0% |
| ! | TATCATGAAGATTTGTCAAA+TGG | + | chr1.4:10495527-10495546 | MS.gene059459:intron | 25.0% |
| ! | TTGAATTCTTGACACTATTT+GGG | + | chr1.4:10495195-10495214 | MS.gene059459:intron | 25.0% |
| ! | TTTGAATTCTTGACACTATT+TGG | + | chr1.4:10495194-10495213 | MS.gene059459:intron | 25.0% |
| !! | ACAGTATATATTGTTGGTAA+AGG | + | chr1.4:10495856-10495875 | MS.gene059459:CDS | 25.0% |
| !! | CAAAAATCATTTCTCTGTTT+TGG | - | chr1.4:10496198-10496217 | None:intergenic | 25.0% |
| !! | CAAATTTTTCTTGCAACATA+TGG | - | chr1.4:10496751-10496770 | None:intergenic | 25.0% |
| !! | GTAATAATTTTCAACCTTTG+TGG | + | chr1.4:10496501-10496520 | MS.gene059459:intron | 25.0% |
| !! | TGTTTATGTTAGTTTCTTGT+GGG | - | chr1.4:10496655-10496674 | None:intergenic | 25.0% |
| !! | TTTAAAATTGCAGCTGAAAT+AGG | + | chr1.4:10498986-10499005 | MS.gene059459:CDS | 25.0% |
| !!! | CATAAATATATCACTTTTCG+AGG | - | chr1.4:10497507-10497526 | None:intergenic | 25.0% |
| !!! | TATTGATTTCTTCATCCTTA+AGG | - | chr1.4:10497336-10497355 | None:intergenic | 25.0% |
| !!! | TTTCGTGCCATTTTTATTAA+TGG | + | chr1.4:10497455-10497474 | MS.gene059459:intron | 25.0% |
| AACTTAGTCAATCTAGTGTA+GGG | + | chr1.4:10495941-10495960 | MS.gene059459:CDS | 30.0% | |
| AATAAATGCAATCATTGTGC+TGG | - | chr1.4:10497223-10497242 | None:intergenic | 30.0% | |
| AATATCAATATTGTCAACCG+CGG | - | chr1.4:10495701-10495720 | None:intergenic | 30.0% | |
| AATGCGTAAACAAGTATGTA+TGG | + | chr1.4:10496327-10496346 | MS.gene059459:intron | 30.0% | |
| AGAAGAGAAAAGAAAAGTAG+TGG | + | chr1.4:10498227-10498246 | MS.gene059459:CDS | 30.0% | |
| AGATACTCAAAATAGTGTCA+AGG | - | chr1.4:10495243-10495262 | None:intergenic | 30.0% | |
| AGTCAAACAATTATGGAAGA+AGG | + | chr1.4:10497086-10497105 | MS.gene059459:CDS | 30.0% | |
| ATCGTATACTAGAACAATAG+TGG | - | chr1.4:10495604-10495623 | None:intergenic | 30.0% | |
| ATTCCAACAACTGTATCAAA+AGG | + | chr1.4:10495817-10495836 | MS.gene059459:CDS | 30.0% | |
| CTTCTTCTAATTTCCATCTT+TGG | - | chr1.4:10498039-10498058 | None:intergenic | 30.0% | |
| GAAATGTTTGATGTCACATA+CGG | + | chr1.4:10496267-10496286 | MS.gene059459:intron | 30.0% | |
| GATCTATGTCAATAGATTAC+TGG | + | chr1.4:10497685-10497704 | MS.gene059459:intron | 30.0% | |
| GTTAAGTTTCTGATATCAGA+AGG | + | chr1.4:10495780-10495799 | MS.gene059459:intron | 30.0% | |
| TAACATAAGACAGGAACAAT+AGG | - | chr1.4:10497747-10497766 | None:intergenic | 30.0% | |
| TGAAAATCTATGAGTAGAGA+TGG | - | chr1.4:10495445-10495464 | None:intergenic | 30.0% | |
| TGAAATGAGAAGACTGAAAT+TGG | + | chr1.4:10497848-10497867 | MS.gene059459:CDS | 30.0% | |
| TGAATTCTTGACACTATTTG+GGG | + | chr1.4:10495196-10495215 | MS.gene059459:intron | 30.0% | |
| TGACAAATCTTCATGATATG+TGG | - | chr1.4:10495525-10495544 | None:intergenic | 30.0% | |
| TGTTAGCACTATGTATAAAG+TGG | - | chr1.4:10496445-10496464 | None:intergenic | 30.0% | |
| TGTTGAACACAAAATTGATG+TGG | - | chr1.4:10498499-10498518 | None:intergenic | 30.0% | |
| TTCCAACAACTGTATCAAAA+GGG | + | chr1.4:10495818-10495837 | MS.gene059459:CDS | 30.0% | |
| ! | AAAGATTAGTGATGTTGGTT+TGG | + | chr1.4:10499105-10499124 | MS.gene059459:CDS | 30.0% |
| ! | ATCTAAAATGGTATTGTGAC+AGG | + | chr1.4:10496852-10496871 | MS.gene059459:intron | 30.0% |
| ! | GTGTTTATGTTAGTTTCTTG+TGG | - | chr1.4:10496656-10496675 | None:intergenic | 30.0% |
| ! | TATGGACGGAAAATTTCTTT+TGG | - | chr1.4:10495088-10495107 | None:intergenic | 30.0% |
| ! | TTGAGGTATTAAGTTGCATA+AGG | + | chr1.4:10498828-10498847 | MS.gene059459:CDS | 30.0% |
| ! | TTTCTTTTGGTATGTTCATC+AGG | - | chr1.4:10495075-10495094 | None:intergenic | 30.0% |
| !! | AAAGAAAAGTAGTGGATTCT+TGG | + | chr1.4:10498235-10498254 | MS.gene059459:CDS | 30.0% |
| !! | AGCTTTGAGTCAAACAATTA+TGG | + | chr1.4:10497079-10497098 | MS.gene059459:CDS | 30.0% |
| !! | CTTGAGAAAACCATTTTTGT+TGG | - | chr1.4:10495409-10495428 | None:intergenic | 30.0% |
| !! | GTATAGAAGGTATTCAATTG+AGG | + | chr1.4:10498275-10498294 | MS.gene059459:CDS | 30.0% |
| !! | TCATATAGTTCTGATACTGA+TGG | + | chr1.4:10497049-10497068 | MS.gene059459:CDS | 30.0% |
| !! | TCTAGAAGGCATTTATAAAC+AGG | - | chr1.4:10498363-10498382 | None:intergenic | 30.0% |
| !! | TCTTTCTCATTTGATAGTGA+TGG | + | chr1.4:10497139-10497158 | MS.gene059459:CDS | 30.0% |
| !!! | CCCTTCTTTTTTATCATTCT+TGG | + | chr1.4:10496536-10496555 | MS.gene059459:intron | 30.0% |
| !!! | TGTAAGTTTCACTTTTTTCC+AGG | + | chr1.4:10495132-10495151 | MS.gene059459:intron | 30.0% |
| AAATATAAGAAGTAGGCCGA+GGG | + | chr1.4:10496625-10496644 | MS.gene059459:intron | 35.0% | |
| AAGGACATTGTAGTAGAACA+TGG | + | chr1.4:10495315-10495334 | MS.gene059459:CDS | 35.0% | |
| AATGAGAAAGATGAGTGATC+AGG | - | chr1.4:10497130-10497149 | None:intergenic | 35.0% | |
| ACAAAAGATATGTCACCTTC+TGG | - | chr1.4:10496932-10496951 | None:intergenic | 35.0% | |
| ACTGATCTGAATTGTAGTTG+TGG | - | chr1.4:10497006-10497025 | None:intergenic | 35.0% | |
| AGCACAAGTTAGTAACAATC+AGG | - | chr1.4:10497804-10497823 | None:intergenic | 35.0% | |
| AGTACATAGAGACCTTAAAC+CGG | + | chr1.4:10499051-10499070 | MS.gene059459:CDS | 35.0% | |
| ATTAGAAGAAGAGAGGAGAT+TGG | + | chr1.4:10498048-10498067 | MS.gene059459:CDS | 35.0% | |
| ATTGGAGCTAAAGCAAACAA+TGG | + | chr1.4:10497866-10497885 | MS.gene059459:CDS | 35.0% | |
| CAACTTAGTCAATCTAGTGT+AGG | + | chr1.4:10495940-10495959 | MS.gene059459:CDS | 35.0% | |
| GAACTAACACTTCACATTGA+AGG | + | chr1.4:10497597-10497616 | MS.gene059459:intron | 35.0% | |
| GATGGAAATTAGAAGAAGAG+AGG | + | chr1.4:10498041-10498060 | MS.gene059459:CDS | 35.0% | |
| GGAAGAAGGTCTATTGATAT+TGG | + | chr1.4:10497100-10497119 | MS.gene059459:CDS | 35.0% | |
| TATCTACCTTTAGTTGCTAC+TGG | - | chr1.4:10495991-10496010 | None:intergenic | 35.0% | |
| TCAATCAGCAATTGAGCATT+TGG | + | chr1.4:10495371-10495390 | MS.gene059459:CDS | 35.0% | |
| TCCAACAACTGTATCAAAAG+GGG | + | chr1.4:10495819-10495838 | MS.gene059459:CDS | 35.0% | |
| TCTCCATATGACCTATCATT+TGG | - | chr1.4:10496899-10496918 | None:intergenic | 35.0% | |
| TGAAATCATACTTGCATTGC+AGG | + | chr1.4:10498805-10498824 | MS.gene059459:intron | 35.0% | |
| TGAACACAAAATTGATGTGG+TGG | - | chr1.4:10498496-10498515 | None:intergenic | 35.0% | |
| TTAAGGTCTCTATGTACTAG+TGG | - | chr1.4:10499049-10499068 | None:intergenic | 35.0% | |
| TTCCAGGATAGAAAAACAAG+AGG | + | chr1.4:10495148-10495167 | MS.gene059459:intron | 35.0% | |
| TTCTTCTTCTGCATCAAATG+TGG | + | chr1.4:10497165-10497184 | MS.gene059459:CDS | 35.0% | |
| TTTCTGATATCAGAAGGTTC+AGG | + | chr1.4:10495786-10495805 | MS.gene059459:intron | 35.0% | |
| ! | ATATCTTTTGTAAGCTCAGG+AGG | + | chr1.4:10496941-10496960 | MS.gene059459:CDS | 35.0% |
| ! | ATTTTAAACCTTAGCTGCCA+AGG | - | chr1.4:10498974-10498993 | None:intergenic | 35.0% |
| ! | CAGCAGAAGGTATGAAAAAT+TGG | + | chr1.4:10497927-10497946 | MS.gene059459:intron | 35.0% |
| ! | GACATATCTTTTGTAAGCTC+AGG | + | chr1.4:10496938-10496957 | MS.gene059459:CDS | 35.0% |
| ! | GAGAACACAAGATTTGAGTT+CGG | - | chr1.4:10498667-10498686 | None:intergenic | 35.0% |
| ! | GATGATTGTCTCTTTTGTAG+AGG | + | chr1.4:10498932-10498951 | MS.gene059459:CDS | 35.0% |
| ! | TGACTAAGTTGAGATTGTAG+AGG | - | chr1.4:10495931-10495950 | None:intergenic | 35.0% |
| ! | TGTTTTCTTGCATCACAAGT+AGG | + | chr1.4:10496569-10496588 | MS.gene059459:intron | 35.0% |
| ! | TTTTTGAACTAGGGTTGTTG+TGG | + | chr1.4:10498712-10498731 | MS.gene059459:intron | 35.0% |
| !! | AGTGTTAGTTCTACATAGCT+AGG | - | chr1.4:10497588-10497607 | None:intergenic | 35.0% |
| !!! | ACCATTGTCATTTTGTGTGT+CGG | - | chr1.4:10497635-10497654 | None:intergenic | 35.0% |
| !!! | TTCCTCTTGTTTTTCTATCC+TGG | - | chr1.4:10495153-10495172 | None:intergenic | 35.0% |
| AAGATGGGATGGAATCATTC+AGG | + | chr1.4:10496146-10496165 | MS.gene059459:CDS | 40.0% | |
| AAGATTGGAGAAGGTGGTTA+TGG | + | chr1.4:10498336-10498355 | MS.gene059459:CDS | 40.0% | |
| ACCAAGATGTGAGGTATAGA+AGG | + | chr1.4:10498262-10498281 | MS.gene059459:CDS | 40.0% | |
| ACCTTCTATACCTCACATCT+TGG | - | chr1.4:10498266-10498285 | None:intergenic | 40.0% | |
| CAACACGTAGATCACAAGAT+GGG | + | chr1.4:10496131-10496150 | MS.gene059459:CDS | 40.0% | |
| CAGAACTATATGACAGCCTA+GGG | - | chr1.4:10497042-10497061 | None:intergenic | 40.0% | |
| CATTATTGAGCAGTGTTCAG+TGG | + | chr1.4:10495038-10495057 | MS.gene059459:CDS | 40.0% | |
| CGTCCAAATGATAGGTCATA+TGG | + | chr1.4:10496893-10496912 | MS.gene059459:CDS | 40.0% | |
| CTAGGCTCTTCCAACAAAAA+TGG | + | chr1.4:10495396-10495415 | MS.gene059459:CDS | 40.0% | |
| GAAATATAAGAAGTAGGCCG+AGG | + | chr1.4:10496624-10496643 | MS.gene059459:intron | 40.0% | |
| GAGTCACTTAAGATTGGAGA+AGG | + | chr1.4:10498327-10498346 | MS.gene059459:CDS | 40.0% | |
| GATTGTAGAGGTGAAAATGC+AGG | - | chr1.4:10495919-10495938 | None:intergenic | 40.0% | |
| GCGAATAAACGATCTGTACT+TGG | - | chr1.4:10496971-10496990 | None:intergenic | 40.0% | |
| GTCGCAAAGATTAGTGATGT+TGG | + | chr1.4:10499100-10499119 | MS.gene059459:CDS | 40.0% | |
| TAATCTTTGCGACGTAGTTG+CGG | - | chr1.4:10499093-10499112 | None:intergenic | 40.0% | |
| TCACTTAAGATTGGAGAAGG+TGG | + | chr1.4:10498330-10498349 | MS.gene059459:CDS | 40.0% | |
| TCAGAACTATATGACAGCCT+AGG | - | chr1.4:10497043-10497062 | None:intergenic | 40.0% | |
| TGCATCACAAGTAGGTAGTT+CGG | + | chr1.4:10496577-10496596 | MS.gene059459:intron | 40.0% | |
| TGTTTGATAGGTACACTGCA+AGG | + | chr1.4:10495296-10495315 | MS.gene059459:intron | 40.0% | |
| TGTTTGTATTAGCACCTGAG+AGG | + | chr1.4:10496092-10496111 | MS.gene059459:intron | 40.0% | |
| TTCGCTGAGTCACTTAAGAT+TGG | + | chr1.4:10498321-10498340 | MS.gene059459:CDS | 40.0% | |
| ! | CTAACTTGTGCTGCAAGTAA+AGG | + | chr1.4:10497812-10497831 | MS.gene059459:intron | 40.0% |
| ! | TTGCATAAGGCATCCAAACA+TGG | + | chr1.4:10498841-10498860 | MS.gene059459:CDS | 40.0% |
| !! | GCAATTGAGCATTTGGTTCT+AGG | + | chr1.4:10495378-10495397 | MS.gene059459:CDS | 40.0% |
| !!! | CCATTGTCATTTTGTGTGTC+GGG | - | chr1.4:10497634-10497653 | None:intergenic | 40.0% |
| AAGGTCACAGTTTCAACGAG+AGG | + | chr1.4:10498431-10498450 | MS.gene059459:CDS | 45.0% | |
| ACCTGAGAGGAAGTCATTTG+AGG | + | chr1.4:10496105-10496124 | MS.gene059459:CDS | 45.0% | |
| ACGTAGATCACAAGATGGGA+TGG | + | chr1.4:10496135-10496154 | MS.gene059459:CDS | 45.0% | |
| ACTATATGACAGCCTAGGGT+TGG | - | chr1.4:10497038-10497057 | None:intergenic | 45.0% | |
| AGAAGAAGAGAGGAGATTGG+AGG | + | chr1.4:10498051-10498070 | MS.gene059459:CDS | 45.0% | |
| AGGCTGTAGAACTCCAAAGA+TGG | + | chr1.4:10498023-10498042 | MS.gene059459:intron | 45.0% | |
| ATTGAGCAGTGTTCAGTGGT+GGG | + | chr1.4:10495042-10495061 | MS.gene059459:CDS | 45.0% | |
| ATTGCAGCTGAAATAGGCAC+AGG | + | chr1.4:10498992-10499011 | MS.gene059459:CDS | 45.0% | |
| CACAAAAGACGCGATATGGA+CGG | - | chr1.4:10495102-10495121 | None:intergenic | 45.0% | |
| CACTATTTACCAGTGATCCG+CGG | + | chr1.4:10495681-10495700 | MS.gene059459:intron | 45.0% | |
| CATACTTGCATTGCAGGTTG+AGG | + | chr1.4:10498811-10498830 | MS.gene059459:intron | 45.0% | |
| CCAACACGTAGATCACAAGA+TGG | + | chr1.4:10496130-10496149 | MS.gene059459:CDS | 45.0% | |
| CCATCTTGTGATCTACGTGT+TGG | - | chr1.4:10496133-10496152 | None:intergenic | 45.0% | |
| CCCGACACACAAAATGACAA+TGG | + | chr1.4:10497631-10497650 | MS.gene059459:intron | 45.0% | |
| CCTGAGAGGAAGTCATTTGA+GGG | + | chr1.4:10496106-10496125 | MS.gene059459:CDS | 45.0% | |
| CTAGGAGACGTCCAAATGAT+AGG | + | chr1.4:10496885-10496904 | MS.gene059459:CDS | 45.0% | |
| CTGAGAGGAAGTCATTTGAG+GGG | + | chr1.4:10496107-10496126 | MS.gene059459:CDS | 45.0% | |
| CTGATATCAGAAGGTTCAGG+TGG | + | chr1.4:10495789-10495808 | MS.gene059459:intron | 45.0% | |
| CTTGGACAAACCAAGATGTG+AGG | + | chr1.4:10498253-10498272 | MS.gene059459:CDS | 45.0% | |
| CTTTAACTGCGACAGGAGTA+TGG | - | chr1.4:10498386-10498405 | None:intergenic | 45.0% | |
| GATGGCTGAAGAATCTGCAT+TGG | + | chr1.4:10498081-10498100 | MS.gene059459:CDS | 45.0% | |
| GCAAGTAAAGGATGATGTGG+AGG | + | chr1.4:10497824-10497843 | MS.gene059459:intron | 45.0% | |
| GCTGCAAGTAAAGGATGATG+TGG | + | chr1.4:10497821-10497840 | MS.gene059459:intron | 45.0% | |
| GGAAAAGTGATACGCCACAA+AGG | - | chr1.4:10496518-10496537 | None:intergenic | 45.0% | |
| GGAGAACTTTCTATGCCAGA+AGG | + | chr1.4:10496914-10496933 | MS.gene059459:CDS | 45.0% | |
| GGCTGTAGCAGAAATGGAAA+AGG | + | chr1.4:10498102-10498121 | MS.gene059459:CDS | 45.0% | |
| GTTAGAGGACTAGGCACAAT+AGG | + | chr1.4:10498641-10498660 | MS.gene059459:intron | 45.0% | |
| GTTTATGAGCACATGGCGAA+CGG | + | chr1.4:10498902-10498921 | MS.gene059459:CDS | 45.0% | |
| GTTTCTTGTGGGTAAACCCT+CGG | - | chr1.4:10496644-10496663 | None:intergenic | 45.0% | |
| TAAACAAGGCAGCCGTATTC+CGG | - | chr1.4:10498887-10498906 | None:intergenic | 45.0% | |
| TATTGAGCAGTGTTCAGTGG+TGG | + | chr1.4:10495041-10495060 | MS.gene059459:CDS | 45.0% | |
| TCACAAGTAGGTAGTTCGGT+TGG | + | chr1.4:10496581-10496600 | MS.gene059459:intron | 45.0% | |
| TCGCCATGTGCTCATAAACA+AGG | - | chr1.4:10498901-10498920 | None:intergenic | 45.0% | |
| TCTCTATGTACTAGTGGCTC+AGG | - | chr1.4:10499043-10499062 | None:intergenic | 45.0% | |
| TGCTGTGAGTGCTTCTTTAC+AGG | - | chr1.4:10497907-10497926 | None:intergenic | 45.0% | |
| TTGAAGCTGCTGAAGCACAA+AGG | + | chr1.4:10498142-10498161 | MS.gene059459:intron | 45.0% | |
| TTTGGACGTCTCCTAGTGAA+TGG | - | chr1.4:10496881-10496900 | None:intergenic | 45.0% | |
| ! | AGTCAAGCTTTTCCAACCCT+AGG | + | chr1.4:10497023-10497042 | MS.gene059459:CDS | 45.0% |
| ! | CTTTTGTAAGCTCAGGAGGA+AGG | + | chr1.4:10496945-10496964 | MS.gene059459:CDS | 45.0% |
| ! | GCCCCTTTTGATACAGTTGT+TGG | - | chr1.4:10495823-10495842 | None:intergenic | 45.0% |
| ! | TTCCTTGTTGTGCATCAGGA+CGG | - | chr1.4:10498413-10498432 | None:intergenic | 45.0% |
| !! | ATGTGGTGGTGTCGCATATA+TGG | - | chr1.4:10498482-10498501 | None:intergenic | 45.0% |
| !! | CTGCCTTGTTTATGAGCACA+TGG | + | chr1.4:10498895-10498914 | MS.gene059459:CDS | 45.0% |
| !! | GCAAGATGTTTGCCGGTTTA+AGG | - | chr1.4:10499066-10499085 | None:intergenic | 45.0% |
| !! | TGCATTGGCTGTAGCAGAAA+TGG | + | chr1.4:10498096-10498115 | MS.gene059459:CDS | 45.0% |
| AACCTTAGCTGCCAAGGTAG+TGG | - | chr1.4:10498968-10498987 | None:intergenic | 50.0% | |
| AAGCTGCTGAAGCACAAAGG+AGG | + | chr1.4:10498145-10498164 | MS.gene059459:intron | 50.0% | |
| ACCTTAGCTGCCAAGGTAGT+GGG | - | chr1.4:10498967-10498986 | None:intergenic | 50.0% | |
| AGAGGAGATTGGAGGAAGCA+AGG | + | chr1.4:10498059-10498078 | MS.gene059459:CDS | 50.0% | |
| CACTCTGCAGTTAGAGGACT+AGG | + | chr1.4:10498632-10498651 | MS.gene059459:intron | 50.0% | |
| CCAAACATGGTTCTCCTCCT+AGG | + | chr1.4:10498854-10498873 | MS.gene059459:CDS | 50.0% | |
| CCCTCAAATGACTTCCTCTC+AGG | - | chr1.4:10496109-10496128 | None:intergenic | 50.0% | |
| CCTAGGAGGAGAACCATGTT+TGG | - | chr1.4:10498857-10498876 | None:intergenic | 50.0% | |
| CGCGGATCACTGGTAAATAG+TGG | - | chr1.4:10495683-10495702 | None:intergenic | 50.0% | |
| CGGAGAACTTTAACTGCGAC+AGG | - | chr1.4:10498393-10498412 | None:intergenic | 50.0% | |
| CGGTCAAGCAAGATGTTTGC+CGG | - | chr1.4:10499073-10499092 | None:intergenic | 50.0% | |
| CGTGTGCCAGTAGCAACTAA+AGG | + | chr1.4:10495982-10496001 | MS.gene059459:CDS | 50.0% | |
| GAAACACTCACCCACTACCT+TGG | + | chr1.4:10498954-10498973 | MS.gene059459:CDS | 50.0% | |
| GAGATTGGAGGAAGCAAGGA+TGG | + | chr1.4:10498063-10498082 | MS.gene059459:CDS | 50.0% | |
| GTCCTGATGCACAACAAGGA+AGG | + | chr1.4:10498412-10498431 | MS.gene059459:CDS | 50.0% | |
| GTGACAGGTCACCATTCACT+AGG | + | chr1.4:10496867-10496886 | MS.gene059459:intron | 50.0% | |
| GTGCTACAGCGTAGCAGAAT+TGG | + | chr1.4:10495572-10495591 | MS.gene059459:intron | 50.0% | |
| TATTGTCAACCGCGGATCAC+TGG | - | chr1.4:10495693-10495712 | None:intergenic | 50.0% | |
| TGCAGTCACTCTGCAGTTAG+AGG | + | chr1.4:10498626-10498645 | MS.gene059459:intron | 50.0% | |
| TTAGTTGCTACTGGCACACG+AGG | - | chr1.4:10495982-10496001 | None:intergenic | 50.0% | |
| ! | CGACAGGAGTATGGTCTAGA+AGG | - | chr1.4:10498377-10498396 | None:intergenic | 50.0% |
| ! | GACCTTCCTTGTTGTGCATC+AGG | - | chr1.4:10498417-10498436 | None:intergenic | 50.0% |
| ! | TCATTTTGTGTGTCGGGCAC+TGG | - | chr1.4:10497628-10497647 | None:intergenic | 50.0% |
| ACCCACTACCTTGGCAGCTA+AGG | + | chr1.4:10498963-10498982 | MS.gene059459:CDS | 55.0% | |
| AGCACTCACAGCACAGCAGA+AGG | + | chr1.4:10497914-10497933 | MS.gene059459:CDS | 55.0% | |
| CGCGCACAAAAGACGCGATA+TGG | - | chr1.4:10495106-10495125 | None:intergenic | 55.0% | |
| CTAGGAGCCTGTCCGGAATA+CGG | + | chr1.4:10498872-10498891 | MS.gene059459:CDS | 55.0% | |
| CTCCGTCCTGATGCACAACA+AGG | + | chr1.4:10498408-10498427 | MS.gene059459:CDS | 55.0% | |
| GCACATGGCGAACGGAAGTT+TGG | + | chr1.4:10498910-10498929 | MS.gene059459:CDS | 55.0% | |
| AAGGCAGCCGTATTCCGGAC+AGG | - | chr1.4:10498882-10498901 | None:intergenic | 60.0% | |
| ATTCCGGACAGGCTCCTAGG+AGG | - | chr1.4:10498871-10498890 | None:intergenic | 60.0% | |
| CGTATTCCGGACAGGCTCCT+AGG | - | chr1.4:10498874-10498893 | None:intergenic | 60.0% | |
| GCTACTGGCACACGAGGTTC+TGG | - | chr1.4:10495976-10495995 | None:intergenic | 60.0% | |
| TCTCCTCCTAGGAGCCTGTC+CGG | + | chr1.4:10498865-10498884 | MS.gene059459:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 10495038 | 10499153 | 10495038 | ID=MS.gene059459 |
| chr1.4 | mRNA | 10495038 | 10499153 | 10495038 | ID=MS.gene059459.t1;Parent=MS.gene059459 |
| chr1.4 | exon | 10495038 | 10495132 | 10495038 | ID=MS.gene059459.t1.exon1;Parent=MS.gene059459.t1 |
| chr1.4 | CDS | 10495038 | 10495132 | 10495038 | ID=cds.MS.gene059459.t1;Parent=MS.gene059459.t1 |
| chr1.4 | exon | 10495306 | 10495417 | 10495306 | ID=MS.gene059459.t1.exon2;Parent=MS.gene059459.t1 |
| chr1.4 | CDS | 10495306 | 10495417 | 10495306 | ID=cds.MS.gene059459.t1;Parent=MS.gene059459.t1 |
| chr1.4 | exon | 10495815 | 10496003 | 10495815 | ID=MS.gene059459.t1.exon3;Parent=MS.gene059459.t1 |
| chr1.4 | CDS | 10495815 | 10496003 | 10495815 | ID=cds.MS.gene059459.t1;Parent=MS.gene059459.t1 |
| chr1.4 | exon | 10496104 | 10496167 | 10496104 | ID=MS.gene059459.t1.exon4;Parent=MS.gene059459.t1 |
| chr1.4 | CDS | 10496104 | 10496167 | 10496104 | ID=cds.MS.gene059459.t1;Parent=MS.gene059459.t1 |
| chr1.4 | exon | 10496874 | 10497186 | 10496874 | ID=MS.gene059459.t1.exon5;Parent=MS.gene059459.t1 |
| chr1.4 | CDS | 10496874 | 10497186 | 10496874 | ID=cds.MS.gene059459.t1;Parent=MS.gene059459.t1 |
| chr1.4 | exon | 10497834 | 10497935 | 10497834 | ID=MS.gene059459.t1.exon6;Parent=MS.gene059459.t1 |
| chr1.4 | CDS | 10497834 | 10497935 | 10497834 | ID=cds.MS.gene059459.t1;Parent=MS.gene059459.t1 |
| chr1.4 | exon | 10498025 | 10498149 | 10498025 | ID=MS.gene059459.t1.exon7;Parent=MS.gene059459.t1 |
| chr1.4 | CDS | 10498025 | 10498149 | 10498025 | ID=cds.MS.gene059459.t1;Parent=MS.gene059459.t1 |
| chr1.4 | exon | 10498194 | 10498452 | 10498194 | ID=MS.gene059459.t1.exon8;Parent=MS.gene059459.t1 |
| chr1.4 | CDS | 10498194 | 10498452 | 10498194 | ID=cds.MS.gene059459.t1;Parent=MS.gene059459.t1 |
| chr1.4 | exon | 10498827 | 10499153 | 10498827 | ID=MS.gene059459.t1.exon9;Parent=MS.gene059459.t1 |
| chr1.4 | CDS | 10498827 | 10499153 | 10498827 | ID=cds.MS.gene059459.t1;Parent=MS.gene059459.t1 |
| Gene Sequence |
| Protein sequence |
