Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86521.t1 | XP_003612408.2 | 96.2 | 573 | 15 | 3 | 1 | 572 | 1 | 567 | 0.00E+00 | 1077.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86521.t1 | O22757 | 58.4 | 570 | 222 | 7 | 8 | 565 | 16 | 582 | 7.9e-180 | 631.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86521.t1 | G7K2K3 | 96.2 | 573 | 15 | 3 | 1 | 572 | 1 | 567 | 0.0e+00 | 1077.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049993 | MS.gene86521 | 0.842096 | 3.19E-58 | -1.69E-46 |
| MS.gene051525 | MS.gene86521 | 0.802711 | 4.93E-49 | -1.69E-46 |
| MS.gene052011 | MS.gene86521 | -0.853977 | 1.67E-61 | -1.69E-46 |
| MS.gene054183 | MS.gene86521 | 0.839221 | 1.80E-57 | -1.69E-46 |
| MS.gene055358 | MS.gene86521 | 0.800745 | 1.25E-48 | -1.69E-46 |
| MS.gene057476 | MS.gene86521 | 0.810327 | 1.22E-50 | -1.69E-46 |
| MS.gene059420 | MS.gene86521 | 0.831799 | 1.36E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86521.t1 | MTR_5g024700 | 96.161 | 573 | 15 | 3 | 1 | 572 | 1 | 567 | 0.0 | 1129 |
| MS.gene86521.t1 | MTR_8g073130 | 69.231 | 559 | 154 | 10 | 3 | 551 | 8 | 558 | 0.0 | 752 |
| MS.gene86521.t1 | MTR_8g073130 | 70.025 | 407 | 114 | 5 | 3 | 405 | 8 | 410 | 0.0 | 585 |
| MS.gene86521.t1 | MTR_8g073130 | 70.408 | 392 | 108 | 5 | 3 | 390 | 8 | 395 | 0.0 | 564 |
| MS.gene86521.t1 | MTR_3g115960 | 54.340 | 530 | 206 | 6 | 28 | 527 | 9 | 532 | 0.0 | 547 |
| MS.gene86521.t1 | MTR_3g115940 | 46.739 | 552 | 268 | 8 | 30 | 565 | 9 | 550 | 1.58e-166 | 485 |
| MS.gene86521.t1 | MTR_6g033330 | 47.619 | 504 | 253 | 6 | 30 | 524 | 9 | 510 | 4.91e-161 | 472 |
| MS.gene86521.t1 | MTR_3g115940 | 46.154 | 507 | 247 | 8 | 75 | 565 | 3 | 499 | 5.18e-154 | 451 |
| MS.gene86521.t1 | MTR_2g093750 | 44.922 | 512 | 261 | 5 | 30 | 524 | 8 | 515 | 2.25e-148 | 440 |
| MS.gene86521.t1 | MTR_3g115940 | 42.935 | 552 | 246 | 9 | 30 | 565 | 9 | 507 | 1.58e-140 | 417 |
| MS.gene86521.t1 | MTR_6g033330 | 46.829 | 410 | 211 | 3 | 23 | 425 | 2 | 411 | 1.49e-134 | 398 |
| MS.gene86521.t1 | MTR_3g115940 | 50.914 | 383 | 176 | 3 | 29 | 404 | 8 | 385 | 1.42e-130 | 387 |
| MS.gene86521.t1 | MTR_8g010530 | 43.145 | 496 | 257 | 6 | 30 | 504 | 12 | 503 | 2.52e-127 | 384 |
| MS.gene86521.t1 | MTR_3g118190 | 43.297 | 455 | 231 | 6 | 30 | 466 | 12 | 457 | 2.61e-126 | 380 |
| MS.gene86521.t1 | MTR_4g079140 | 38.160 | 511 | 278 | 5 | 30 | 537 | 7 | 482 | 3.48e-119 | 364 |
| MS.gene86521.t1 | MTR_8g010500 | 42.827 | 467 | 245 | 8 | 48 | 494 | 28 | 492 | 5.06e-116 | 354 |
| MS.gene86521.t1 | MTR_2g028470 | 40.456 | 482 | 262 | 8 | 29 | 498 | 7 | 475 | 3.44e-110 | 338 |
| MS.gene86521.t1 | MTR_2g079500 | 37.705 | 488 | 267 | 10 | 23 | 492 | 2 | 470 | 6.60e-105 | 327 |
| MS.gene86521.t1 | MTR_2g006280 | 34.411 | 526 | 305 | 14 | 30 | 527 | 9 | 522 | 4.20e-83 | 270 |
| MS.gene86521.t1 | MTR_5g022400 | 33.150 | 546 | 331 | 11 | 24 | 551 | 4 | 533 | 1.32e-82 | 268 |
| MS.gene86521.t1 | MTR_5g022400 | 35.309 | 388 | 236 | 8 | 24 | 401 | 4 | 386 | 3.55e-60 | 204 |
| MS.gene86521.t1 | MTR_2g030020 | 38.835 | 103 | 53 | 3 | 368 | 470 | 8 | 100 | 1.98e-17 | 80.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86521.t1 | AT2G17480 | 59.425 | 557 | 211 | 7 | 21 | 565 | 29 | 582 | 0.0 | 650 |
| MS.gene86521.t1 | AT2G17430 | 57.565 | 542 | 216 | 4 | 3 | 543 | 8 | 536 | 0.0 | 622 |
| MS.gene86521.t1 | AT5G65970 | 58.185 | 562 | 207 | 9 | 15 | 567 | 21 | 563 | 0.0 | 617 |
| MS.gene86521.t1 | AT2G33670 | 56.112 | 499 | 201 | 6 | 30 | 527 | 15 | 496 | 0.0 | 558 |
| MS.gene86521.t1 | AT1G42560 | 58.444 | 450 | 181 | 4 | 30 | 476 | 14 | 460 | 0.0 | 518 |
| MS.gene86521.t1 | AT1G61560 | 46.801 | 547 | 267 | 7 | 30 | 564 | 8 | 542 | 2.91e-169 | 493 |
| MS.gene86521.t1 | AT1G61560 | 45.719 | 549 | 270 | 9 | 30 | 564 | 8 | 542 | 4.43e-162 | 475 |
| MS.gene86521.t1 | AT5G65970 | 61.264 | 364 | 125 | 4 | 15 | 378 | 21 | 368 | 3.69e-161 | 469 |
| MS.gene86521.t1 | AT1G11310 | 49.891 | 459 | 215 | 3 | 30 | 473 | 8 | 466 | 2.19e-156 | 460 |
| MS.gene86521.t1 | AT2G39200 | 44.000 | 550 | 286 | 9 | 30 | 566 | 6 | 546 | 8.96e-154 | 453 |
| MS.gene86521.t1 | AT1G61560 | 51.389 | 432 | 198 | 3 | 29 | 448 | 7 | 438 | 1.74e-152 | 446 |
| MS.gene86521.t1 | AT1G61560 | 45.122 | 492 | 246 | 7 | 85 | 564 | 1 | 480 | 1.15e-142 | 423 |
| MS.gene86521.t1 | AT1G61560 | 45.122 | 492 | 246 | 7 | 85 | 564 | 1 | 480 | 1.15e-142 | 423 |
| MS.gene86521.t1 | AT1G61560 | 50.611 | 409 | 190 | 3 | 29 | 425 | 7 | 415 | 6.16e-141 | 414 |
| MS.gene86521.t1 | AT1G61560 | 50.611 | 409 | 190 | 3 | 29 | 425 | 7 | 415 | 6.16e-141 | 414 |
| MS.gene86521.t1 | AT1G42560 | 57.027 | 370 | 153 | 4 | 30 | 396 | 14 | 380 | 2.37e-138 | 407 |
| MS.gene86521.t1 | AT3G45290 | 43.107 | 457 | 247 | 3 | 30 | 486 | 17 | 460 | 9.88e-136 | 405 |
| MS.gene86521.t1 | AT1G61560 | 51.169 | 385 | 176 | 3 | 29 | 401 | 7 | 391 | 1.76e-133 | 395 |
| MS.gene86521.t1 | AT1G61560 | 51.169 | 385 | 176 | 3 | 29 | 401 | 7 | 391 | 1.76e-133 | 395 |
| MS.gene86521.t1 | AT1G61560 | 51.169 | 385 | 176 | 3 | 29 | 401 | 7 | 391 | 1.76e-133 | 395 |
| MS.gene86521.t1 | AT1G11310 | 49.148 | 411 | 194 | 5 | 30 | 425 | 8 | 418 | 1.94e-133 | 395 |
| MS.gene86521.t1 | AT2G44110 | 41.434 | 502 | 279 | 7 | 31 | 529 | 7 | 496 | 4.48e-130 | 390 |
| MS.gene86521.t1 | AT1G11310 | 48.020 | 404 | 195 | 3 | 85 | 473 | 1 | 404 | 4.28e-129 | 388 |
| MS.gene86521.t1 | AT2G44110 | 41.270 | 504 | 278 | 9 | 31 | 529 | 7 | 497 | 4.92e-128 | 384 |
| MS.gene86521.t1 | AT4G02600 | 41.909 | 482 | 262 | 6 | 31 | 500 | 9 | 484 | 6.49e-127 | 382 |
| MS.gene86521.t1 | AT4G02600 | 41.909 | 482 | 262 | 6 | 31 | 500 | 9 | 484 | 6.49e-127 | 382 |
| MS.gene86521.t1 | AT4G24250 | 40.580 | 483 | 266 | 6 | 29 | 500 | 6 | 478 | 1.14e-110 | 339 |
| MS.gene86521.t1 | AT5G53760 | 36.147 | 545 | 312 | 9 | 22 | 559 | 8 | 523 | 7.41e-107 | 332 |
| MS.gene86521.t1 | AT5G53760 | 36.147 | 545 | 312 | 9 | 22 | 559 | 8 | 523 | 7.41e-107 | 332 |
| MS.gene86521.t1 | AT1G26700 | 38.494 | 478 | 282 | 8 | 24 | 492 | 4 | 478 | 2.08e-103 | 323 |
| MS.gene86521.t1 | AT1G26700 | 38.494 | 478 | 282 | 8 | 24 | 492 | 4 | 478 | 2.08e-103 | 323 |
| MS.gene86521.t1 | AT4G24250 | 41.985 | 393 | 207 | 6 | 29 | 410 | 6 | 388 | 2.83e-91 | 286 |
| MS.gene86521.t1 | AT1G11000 | 33.902 | 469 | 290 | 8 | 30 | 490 | 9 | 465 | 8.02e-81 | 265 |
| MS.gene86521.t1 | AT1G11000 | 33.902 | 469 | 290 | 8 | 30 | 490 | 9 | 465 | 8.02e-81 | 265 |
| MS.gene86521.t1 | AT1G11000 | 33.416 | 404 | 255 | 6 | 30 | 427 | 9 | 404 | 1.55e-66 | 223 |
Find 112 sgRNAs with CRISPR-Local
Find 368 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCACAAGATATATGTTATT+TGG | 0.146379 | 5.1:-15258133 | None:intergenic |
| AACATAATGCTTACAATAAT+TGG | 0.167606 | 5.1:-15257776 | None:intergenic |
| TAATTTGTTGCAGATAATTT+TGG | 0.171828 | 5.1:+15257847 | MS.gene86521:intron |
| GAAAGTGAACTCATCATTAT+TGG | 0.216889 | 5.1:-15259063 | None:intergenic |
| GCCATTATAAAAGTAGCTTT+TGG | 0.241594 | 5.1:+15258346 | MS.gene86521:CDS |
| GAGAAGAGTCTTCACAAATT+AGG | 0.261193 | 5.1:+15252861 | MS.gene86521:CDS |
| CAGGATGGCGTACTCCAATA+TGG | 0.262453 | 5.1:+15257741 | MS.gene86521:intron |
| TCTTGTTTGTGTCTCTTCTA+TGG | 0.266325 | 5.1:+15252717 | MS.gene86521:CDS |
| ATTTCACTGTTATTAACTAT+TGG | 0.268067 | 5.1:+15255367 | MS.gene86521:CDS |
| TGGAAATTAAATTTACTTCC+AGG | 0.296007 | 5.1:-15257099 | None:intergenic |
| AGTGCTGTCACAATGCTTCT+TGG | 0.313331 | 5.1:+15256041 | MS.gene86521:CDS |
| GTTTCTCACCATGAATGTTT+AGG | 0.319021 | 5.1:-15257317 | None:intergenic |
| TTCTTGCTCCTAAACATTCA+TGG | 0.336700 | 5.1:+15257309 | MS.gene86521:CDS |
| GACGGGACGCACAATATAAA+AGG | 0.355343 | 5.1:-15256440 | None:intergenic |
| ATACCTGAAACAAAGCAAAA+TGG | 0.358535 | 5.1:-15258015 | None:intergenic |
| GTGCCATTTCTTTAATGCCT+TGG | 0.360439 | 5.1:-15258775 | None:intergenic |
| TACCTTCCTGCTGCATTTGA+AGG | 0.366783 | 5.1:-15255554 | None:intergenic |
| GCTGGAAAATTGTTTCCGTT+TGG | 0.393446 | 5.1:+15258312 | MS.gene86521:CDS |
| AAGGCTCAGATAGATACTTT+TGG | 0.393792 | 5.1:+15257960 | MS.gene86521:CDS |
| CCATGTCCACATAAATATAT+AGG | 0.399986 | 5.1:+15255445 | MS.gene86521:CDS |
| ATTTACTTCCAGGAGCTAGA+TGG | 0.409021 | 5.1:-15257089 | None:intergenic |
| ATTATCTGATAATGAGTTGA+TGG | 0.411205 | 5.1:+15258968 | MS.gene86521:CDS |
| TAAATCCATTGCGCAAAGTC+TGG | 0.417004 | 5.1:-15256899 | None:intergenic |
| ATCATTAGAAGATGACTTCA+AGG | 0.418712 | 5.1:+15257137 | MS.gene86521:CDS |
| CATCCAAGGCATTAAAGAAA+TGG | 0.418981 | 5.1:+15258772 | MS.gene86521:CDS |
| TCAAGTGATATTAGCAAGAA+TGG | 0.432108 | 5.1:+15257886 | MS.gene86521:CDS |
| GCTTACAATAATTGGAATCA+AGG | 0.442500 | 5.1:-15257768 | None:intergenic |
| GTGCAGATGCTGCAAAATTC+AGG | 0.444314 | 5.1:+15256356 | MS.gene86521:intron |
| GGAATCAAGGATGCCCATAT+TGG | 0.444495 | 5.1:-15257755 | None:intergenic |
| AAACGGTGAAGTGCTGGTCC+AGG | 0.458690 | 5.1:-15258888 | None:intergenic |
| AGAATATGAGGATGTGTAAC+TGG | 0.460799 | 5.1:-15255992 | None:intergenic |
| CAAGGAATGCCTCTTGTTCA+AGG | 0.463724 | 5.1:+15257941 | MS.gene86521:CDS |
| GTTAGGAAATAGAGAAAAGA+AGG | 0.465297 | 5.1:+15255172 | MS.gene86521:CDS |
| TCAAGGTAGTCGTGGGAGTA+AGG | 0.468406 | 5.1:+15257154 | MS.gene86521:CDS |
| CAATCATGTAGATGGGTTCA+AGG | 0.474565 | 5.1:+15258721 | MS.gene86521:intron |
| ATGGATGGTAGCACCATTGT+TGG | 0.475444 | 5.1:+15258849 | MS.gene86521:CDS |
| GCTACCATCCATGGTTCCTA+TGG | 0.476251 | 5.1:-15258838 | None:intergenic |
| GTATAGGTCCATCTAGCTCC+TGG | 0.477053 | 5.1:+15257081 | MS.gene86521:intron |
| GATAAATATCTACCTTCAAA+AGG | 0.479113 | 5.1:-15255517 | None:intergenic |
| ATAGTAAAGTGGAACAAAGT+AGG | 0.485840 | 5.1:+15255485 | MS.gene86521:CDS |
| TGAAGATCGTGTTGAGTGGC+CGG | 0.493387 | 5.1:-15258919 | None:intergenic |
| CTGCAACTGCAAGTGATAGT+AGG | 0.493776 | 5.1:+15252754 | MS.gene86521:CDS |
| TGTGTTACAAGAGCATATAA+TGG | 0.494787 | 5.1:-15258515 | None:intergenic |
| ATGAGCAAGATACAGAAGAT+AGG | 0.503108 | 5.1:+15259021 | MS.gene86521:CDS |
| CTCCCTCCTTCAAATGCAGC+AGG | 0.503605 | 5.1:+15255548 | MS.gene86521:CDS |
| ATCACTTGCAGTTGCAGCCA+TGG | 0.505471 | 5.1:-15252748 | None:intergenic |
| AACAATGGTGCTACCATCCA+TGG | 0.508522 | 5.1:-15258847 | None:intergenic |
| TATCTACCTTCAAAAGGCAC+TGG | 0.510665 | 5.1:-15255511 | None:intergenic |
| CTATCTGAGCCTTGAACAAG+AGG | 0.511794 | 5.1:-15257950 | None:intergenic |
| TCCAAATAACATATATCTTG+TGG | 0.513239 | 5.1:+15258132 | MS.gene86521:CDS |
| AAGACTCTTCTCAAGGGCTA+TGG | 0.514031 | 5.1:-15252850 | None:intergenic |
| TGGCAAGCTTATAGTCCAAA+CGG | 0.516392 | 5.1:-15258327 | None:intergenic |
| ATATTCATCTTGTTCGTCAA+AGG | 0.516799 | 5.1:-15258943 | None:intergenic |
| TCACCACCTATATATTTATG+TGG | 0.522982 | 5.1:-15255451 | None:intergenic |
| CTTCTATGGAGGTTTATCCA+TGG | 0.524831 | 5.1:+15252731 | MS.gene86521:CDS |
| TTTAAACAGTCCTGTCCTCT+GGG | 0.526222 | 5.1:+15257272 | MS.gene86521:intron |
| TATGAAATCAAATAGTAAAG+TGG | 0.527640 | 5.1:+15255474 | MS.gene86521:CDS |
| AGGATGGCGTACTCCAATAT+GGG | 0.537615 | 5.1:+15257742 | MS.gene86521:intron |
| GGATCAACAATGCAGTCCCC+TGG | 0.538298 | 5.1:+15258870 | MS.gene86521:CDS |
| AGATACGTGGATGGAAGGAA+TGG | 0.539200 | 5.1:+15256157 | MS.gene86521:intron |
| CACTTGATCAAACACCGACA+TGG | 0.539851 | 5.1:+15252790 | MS.gene86521:CDS |
| CTTCACCGTTTCAAAACTAC+CGG | 0.540316 | 5.1:+15258900 | MS.gene86521:CDS |
| CCTATATATTTATGTGGACA+TGG | 0.544668 | 5.1:-15255445 | None:intergenic |
| TCTGCTTGAAGCTCTAGAAA+AGG | 0.545191 | 5.1:+15255196 | MS.gene86521:CDS |
| CTTCCTGCTGCATTTGAAGG+AGG | 0.545611 | 5.1:-15255551 | None:intergenic |
| TTCCTGCTGCATTTGAAGGA+GGG | 0.549958 | 5.1:-15255550 | None:intergenic |
| ACAGCTGATGCCCAGAGGAC+AGG | 0.549959 | 5.1:-15257282 | None:intergenic |
| ATTTGTGAAGACTCTTCTCA+AGG | 0.550068 | 5.1:-15252857 | None:intergenic |
| ACTTGATCAAACACCGACAT+GGG | 0.550596 | 5.1:+15252791 | MS.gene86521:CDS |
| AGACTGCTAGGAAGAATATG+AGG | 0.552334 | 5.1:-15256004 | None:intergenic |
| AAGCTAGGAAAGACTACCAT+AGG | 0.553861 | 5.1:+15258822 | MS.gene86521:CDS |
| TAACATATATCTTGTGGACA+TGG | 0.554175 | 5.1:+15258138 | MS.gene86521:CDS |
| TTACAAGAGCATATAATGGA+AGG | 0.555462 | 5.1:-15258511 | None:intergenic |
| GCTCTAGAAAAGGTCAAGGC+TGG | 0.557508 | 5.1:+15255206 | MS.gene86521:CDS |
| AGAAAACACCCTCTTGAACA+TGG | 0.560881 | 5.1:-15252697 | None:intergenic |
| AACGGTGAAGTGCTGGTCCA+GGG | 0.561182 | 5.1:-15258887 | None:intergenic |
| TGTTTGTGTCTCTTCTATGG+AGG | 0.561209 | 5.1:+15252720 | MS.gene86521:CDS |
| ATTATATGCTCTTGTAACAC+AGG | 0.568116 | 5.1:+15258517 | MS.gene86521:CDS |
| GATACGTGGATGGAAGGAAT+GGG | 0.573280 | 5.1:+15256158 | MS.gene86521:intron |
| GAAGATAGGCATCATAGTGA+GGG | 0.573541 | 5.1:+15259035 | MS.gene86521:CDS |
| ATAAGATGAAGAACTAATTG+AGG | 0.574661 | 5.1:-15257992 | None:intergenic |
| TCTGCAGATACGTGGATGGA+AGG | 0.581567 | 5.1:+15256152 | MS.gene86521:intron |
| AGAAGATAGGCATCATAGTG+AGG | 0.582865 | 5.1:+15259034 | MS.gene86521:CDS |
| AAAACACATGAAAGACTGCT+AGG | 0.587475 | 5.1:-15256016 | None:intergenic |
| CATGGTTATGAGTTCGCCAA+TGG | 0.587616 | 5.1:+15256198 | MS.gene86521:CDS |
| AGATGACTTCAAGGTAGTCG+TGG | 0.587794 | 5.1:+15257146 | MS.gene86521:CDS |
| TTTGTGAAGACTCTTCTCAA+GGG | 0.593069 | 5.1:-15252856 | None:intergenic |
| AGTCCATTCACAGATAAAAG+TGG | 0.595794 | 5.1:-15255966 | None:intergenic |
| AACATATATCTTGTGGACAT+GGG | 0.598646 | 5.1:+15258139 | MS.gene86521:CDS |
| ATTTGATGAACAAACATCCA+AGG | 0.600958 | 5.1:+15258758 | MS.gene86521:CDS |
| GATTACCAGACTTTGCGCAA+TGG | 0.602153 | 5.1:+15256894 | MS.gene86521:CDS |
| GAAGGGTAATGTAGCTGCAG+AGG | 0.606205 | 5.1:-15258493 | None:intergenic |
| ACGTGGATGGAAGGAATGGG+AGG | 0.615112 | 5.1:+15256161 | MS.gene86521:CDS |
| AATGCTTCTTGGAAGACTCA+AGG | 0.618511 | 5.1:+15256052 | MS.gene86521:CDS |
| TGTTTCTGCAGATACGTGGA+TGG | 0.619092 | 5.1:+15256148 | MS.gene86521:intron |
| TACAAGAGCATATAATGGAA+GGG | 0.620814 | 5.1:-15258510 | None:intergenic |
| GATGACTTCAAGGTAGTCGT+GGG | 0.621529 | 5.1:+15257147 | MS.gene86521:CDS |
| AAAGACTACCATAGGAACCA+TGG | 0.621551 | 5.1:+15258830 | MS.gene86521:CDS |
| GAGGAAGAGACTTTAACTCA+TGG | 0.624104 | 5.1:+15256180 | MS.gene86521:CDS |
| CTCCTTCAAATGCAGCAGGA+AGG | 0.624540 | 5.1:+15255552 | MS.gene86521:CDS |
| ACGGTGAAGTGCTGGTCCAG+GGG | 0.626903 | 5.1:-15258886 | None:intergenic |
| GAGAGACATATAGTTGTACA+AGG | 0.627620 | 5.1:+15257923 | MS.gene86521:CDS |
| GAGTCTTCACAAATTAGGAA+CGG | 0.644358 | 5.1:+15252866 | MS.gene86521:CDS |
| TGTCCACATAAATATATAGG+TGG | 0.645928 | 5.1:+15255448 | MS.gene86521:CDS |
| AGGTTGAAGATCGTGTTGAG+TGG | 0.648335 | 5.1:-15258923 | None:intergenic |
| ACTACCATAGGAACCATGGA+TGG | 0.655607 | 5.1:+15258834 | MS.gene86521:CDS |
| TGAAGCTCTAGAAAAGGTCA+AGG | 0.656136 | 5.1:+15255202 | MS.gene86521:CDS |
| CTTGATCAAACACCGACATG+GGG | 0.671274 | 5.1:+15252792 | MS.gene86521:CDS |
| CTGCATTGTTGATCCAACAA+TGG | 0.691467 | 5.1:-15258862 | None:intergenic |
| ACAGCGGCAACACCCCATGT+CGG | 0.692061 | 5.1:-15252804 | None:intergenic |
| GATGAAAACAGTGCAAACAG+CGG | 0.718520 | 5.1:-15252820 | None:intergenic |
| AAACTACAGCTGATGCCCAG+AGG | 0.737888 | 5.1:-15257287 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATAATATTAATAATAA+GGG | - | chr5.1:15254999-15255018 | None:intergenic | 0.0% |
| !! | TAATAATAATATTAATAATA+AGG | - | chr5.1:15255000-15255019 | None:intergenic | 0.0% |
| !! | TATTATTATTATTATTATTA+GGG | + | chr5.1:15254419-15254438 | MS.gene86521:intron | 0.0% |
| !! | TTATTATTATTATTATTATT+AGG | + | chr5.1:15254259-15254278 | MS.gene86521:intron | 0.0% |
| !! | AAATTATAGAATAGAATTTA+TGG | + | chr5.1:15257613-15257632 | MS.gene86521:intron | 10.0% |
| !! | AATAATTTGATTAATTTCAA+TGG | + | chr5.1:15258446-15258465 | MS.gene86521:intron | 10.0% |
| !! | ATAATTTGATTAATTTCAAT+GGG | + | chr5.1:15258447-15258466 | MS.gene86521:intron | 10.0% |
| !! | ATTTATTATTCAAATATAGT+GGG | - | chr5.1:15257226-15257245 | None:intergenic | 10.0% |
| !! | TATTTATTATTCAAATATAG+TGG | - | chr5.1:15257227-15257246 | None:intergenic | 10.0% |
| !! | TTAAAGTGAAAAATATTTAA+GGG | + | chr5.1:15253817-15253836 | MS.gene86521:intron | 10.0% |
| !!! | ATTTTTTTAAACAAACATTA+AGG | - | chr5.1:15256737-15256756 | None:intergenic | 10.0% |
| !!! | GAACTATAATTTTTATTATA+TGG | - | chr5.1:15257699-15257718 | None:intergenic | 10.0% |
| !!! | TATTTTAGTACTAAATTTTT+TGG | + | chr5.1:15257408-15257427 | MS.gene86521:intron | 10.0% |
| !!! | TTTAAAGTGAAAAATATTTA+AGG | + | chr5.1:15253816-15253835 | MS.gene86521:intron | 10.0% |
| !!! | TTTCACTTTAAATATATTTT+TGG | - | chr5.1:15253808-15253827 | None:intergenic | 10.0% |
| !!! | TTTTTTACTTTTTCATATTT+TGG | + | chr5.1:15253585-15253604 | MS.gene86521:intron | 10.0% |
| !!! | TTTTTTTAAACAAACATTAA+GGG | - | chr5.1:15256736-15256755 | None:intergenic | 10.0% |
| !! | AAAAAATGTCAAATATGTAT+TGG | - | chr5.1:15253955-15253974 | None:intergenic | 15.0% |
| !! | AATTAGCAAAAAATTAAAAG+AGG | - | chr5.1:15256486-15256505 | None:intergenic | 15.0% |
| !! | ATTTATCAATGTTAAAACTA+TGG | - | chr5.1:15253325-15253344 | None:intergenic | 15.0% |
| !! | TAATATGATGTCTAAAAAAT+TGG | + | chr5.1:15253842-15253861 | MS.gene86521:intron | 15.0% |
| !! | TAATTTGATTAATTTCAATG+GGG | + | chr5.1:15258448-15258467 | MS.gene86521:intron | 15.0% |
| !! | TATAACTTAATAAGTTTCAT+AGG | - | chr5.1:15258078-15258097 | None:intergenic | 15.0% |
| !! | TTAAGGTATACTAATAATTA+AGG | - | chr5.1:15258172-15258191 | None:intergenic | 15.0% |
| !! | TTTAAAAAAATACAGATAGA+TGG | + | chr5.1:15256746-15256765 | MS.gene86521:intron | 15.0% |
| !!! | AAAAGTCAAGAAATTTTTTA+GGG | - | chr5.1:15254561-15254580 | None:intergenic | 15.0% |
| !!! | AATTTTTTAGACATCATATT+AGG | - | chr5.1:15253843-15253862 | None:intergenic | 15.0% |
| !!! | ATATTTAACTTGAAAACTTT+TGG | - | chr5.1:15254589-15254608 | None:intergenic | 15.0% |
| !!! | TAAAAGTCAAGAAATTTTTT+AGG | - | chr5.1:15254562-15254581 | None:intergenic | 15.0% |
| !!! | TATTTAACTTGAAAACTTTT+GGG | - | chr5.1:15254588-15254607 | None:intergenic | 15.0% |
| !!! | TTTAATTTTTTGCTAATTTG+AGG | + | chr5.1:15256488-15256507 | MS.gene86521:intron | 15.0% |
| !!! | TTTGTATGAAATTTTCATAT+TGG | + | chr5.1:15257800-15257819 | MS.gene86521:intron | 15.0% |
| !!! | TTTTGTTAAACATACTATAT+GGG | - | chr5.1:15256951-15256970 | None:intergenic | 15.0% |
| !!! | TTTTTGTTAAACATACTATA+TGG | - | chr5.1:15256952-15256971 | None:intergenic | 15.0% |
| !! | AACATAATGCTTACAATAAT+TGG | - | chr5.1:15257779-15257798 | None:intergenic | 20.0% |
| !! | ACCTATACATAATTTAAAGA+AGG | - | chr5.1:15257069-15257088 | None:intergenic | 20.0% |
| !! | AGAAACAAAACTTTCATATA+AGG | - | chr5.1:15256135-15256154 | None:intergenic | 20.0% |
| !! | ATACATAATTTAAAGAAGGA+AGG | - | chr5.1:15257065-15257084 | None:intergenic | 20.0% |
| !! | ATTCTTGTATTTCAATTTCA+GGG | + | chr5.1:15256831-15256850 | MS.gene86521:intron | 20.0% |
| !! | ATTTATATGATGTTAAGTGT+TGG | - | chr5.1:15253638-15253657 | None:intergenic | 20.0% |
| !! | ATTTCACTGTTATTAACTAT+TGG | + | chr5.1:15255367-15255386 | MS.gene86521:CDS | 20.0% |
| !! | CCTCAAAAAAAAAAAGATTA+AGG | - | chr5.1:15258189-15258208 | None:intergenic | 20.0% |
| !! | GAAATTGAAATACAAGAATA+TGG | - | chr5.1:15256830-15256849 | None:intergenic | 20.0% |
| !! | TACAAAGACAATAATATGTA+GGG | - | chr5.1:15254369-15254388 | None:intergenic | 20.0% |
| !! | TATAATACACATCAAATAAG+TGG | + | chr5.1:15254119-15254138 | MS.gene86521:intron | 20.0% |
| !! | TATAGAATAGAATTTATGGA+GGG | + | chr5.1:15257617-15257636 | MS.gene86521:intron | 20.0% |
| !! | TATAGATTAGATATACTAGT+TGG | - | chr5.1:15258398-15258417 | None:intergenic | 20.0% |
| !! | TATGAAATCAAATAGTAAAG+TGG | + | chr5.1:15255474-15255493 | MS.gene86521:CDS | 20.0% |
| !! | TATTCTTGTATTTCAATTTC+AGG | + | chr5.1:15256830-15256849 | MS.gene86521:intron | 20.0% |
| !! | TCCTTCTTTAAATTATGTAT+AGG | + | chr5.1:15257065-15257084 | MS.gene86521:intron | 20.0% |
| !! | TTACAAAGACAATAATATGT+AGG | - | chr5.1:15254370-15254389 | None:intergenic | 20.0% |
| !! | TTACTAGTAGTAAAACAATA+TGG | - | chr5.1:15253013-15253032 | None:intergenic | 20.0% |
| !! | TTATAGAATAGAATTTATGG+AGG | + | chr5.1:15257616-15257635 | MS.gene86521:intron | 20.0% |
| !! | TTGAAACAAACCTAAAATAT+GGG | - | chr5.1:15253900-15253919 | None:intergenic | 20.0% |
| !! | TTTGTTAAACATACTATATG+GGG | - | chr5.1:15256950-15256969 | None:intergenic | 20.0% |
| !!! | AAAGTCAAGAAATTTTTTAG+GGG | - | chr5.1:15254560-15254579 | None:intergenic | 20.0% |
| !!! | AAGTTGAATTTTTCTTTTAG+TGG | + | chr5.1:15255150-15255169 | MS.gene86521:intron | 20.0% |
| !!! | AATAAATAAAGTGCTGAATT+TGG | + | chr5.1:15257239-15257258 | MS.gene86521:intron | 20.0% |
| !!! | AATTTTGCTTTACTATTTCA+AGG | - | chr5.1:15253540-15253559 | None:intergenic | 20.0% |
| !!! | ACATTTAGATAAGAGTATTT+TGG | + | chr5.1:15254092-15254111 | MS.gene86521:intron | 20.0% |
| !!! | ATAAGGGTTAAATATGTTTT+TGG | - | chr5.1:15254983-15255002 | None:intergenic | 20.0% |
| !!! | ATGATCTTTTGATATACTTT+TGG | - | chr5.1:15257122-15257141 | None:intergenic | 20.0% |
| !!! | ATTTAACTTGAAAACTTTTG+GGG | - | chr5.1:15254587-15254606 | None:intergenic | 20.0% |
| !!! | ATTTTTTTGCAGTATTCTTT+TGG | + | chr5.1:15258289-15258308 | MS.gene86521:intron | 20.0% |
| !!! | CCTTAATCTTTTTTTTTTTG+AGG | + | chr5.1:15258186-15258205 | MS.gene86521:intron | 20.0% |
| !!! | GAAAAGTTGGTATATTTATA+GGG | + | chr5.1:15254956-15254975 | MS.gene86521:intron | 20.0% |
| !!! | TAATTGTGTGATTTTATATG+AGG | + | chr5.1:15253265-15253284 | MS.gene86521:intron | 20.0% |
| !!! | TAATTTGTTGCAGATAATTT+TGG | + | chr5.1:15257847-15257866 | MS.gene86521:intron | 20.0% |
| !!! | TAATTTTTATGTCTCTTTGT+CGG | - | chr5.1:15253238-15253257 | None:intergenic | 20.0% |
| !!! | TCAATTTGAAATTAAATGCT+AGG | - | chr5.1:15253039-15253058 | None:intergenic | 20.0% |
| !!! | TCAATTTGTTAAAATCACAA+TGG | - | chr5.1:15255823-15255842 | None:intergenic | 20.0% |
| !!! | TCATTTTTAAATGAAAGAGA+AGG | - | chr5.1:15255597-15255616 | None:intergenic | 20.0% |
| !!! | TTTGAAACAAACCTAAAATA+TGG | - | chr5.1:15253901-15253920 | None:intergenic | 20.0% |
| !!! | TTTTGGATTAATCATTAAAG+TGG | + | chr5.1:15255731-15255750 | MS.gene86521:intron | 20.0% |
| !!! | TTTTGTTTAACTAGTCAAAA+TGG | - | chr5.1:15257489-15257508 | None:intergenic | 20.0% |
| !!! | TTTTTTTGCAGTATTCTTTT+GGG | + | chr5.1:15258290-15258309 | MS.gene86521:intron | 20.0% |
| ! | AAAAAGTTCATGTACTAATG+AGG | - | chr5.1:15253441-15253460 | None:intergenic | 25.0% |
| ! | AAAGAAAAATTCAACTTGTG+AGG | - | chr5.1:15255147-15255166 | None:intergenic | 25.0% |
| ! | AAATGAAAGAGAAGGAAAAA+AGG | - | chr5.1:15255589-15255608 | None:intergenic | 25.0% |
| ! | AAGGTTGGAAAAAAATTTAG+AGG | + | chr5.1:15254924-15254943 | MS.gene86521:intron | 25.0% |
| ! | ACAAAGACAATAATATGTAG+GGG | - | chr5.1:15254368-15254387 | None:intergenic | 25.0% |
| ! | ACATTCTTAGTTGAGTTATA+TGG | + | chr5.1:15257341-15257360 | MS.gene86521:intron | 25.0% |
| ! | AGGTTGGAAAAAAATTTAGA+GGG | + | chr5.1:15254925-15254944 | MS.gene86521:intron | 25.0% |
| ! | AGTAGTAAAACAATATGGAA+GGG | - | chr5.1:15253008-15253027 | None:intergenic | 25.0% |
| ! | ATAAGATGAAGAACTAATTG+AGG | - | chr5.1:15257995-15258014 | None:intergenic | 25.0% |
| ! | ATAGACATTATAAGCATATG+AGG | - | chr5.1:15256323-15256342 | None:intergenic | 25.0% |
| ! | ATTATTTATGAGAGACTTGT+AGG | + | chr5.1:15254059-15254078 | MS.gene86521:intron | 25.0% |
| ! | ATTTCGGCAAAAACTAAATT+TGG | + | chr5.1:15255777-15255796 | MS.gene86521:intron | 25.0% |
| ! | GATAAATATCTACCTTCAAA+AGG | - | chr5.1:15255520-15255539 | None:intergenic | 25.0% |
| ! | GATCAACATTGTATATTGTA+TGG | + | chr5.1:15257195-15257214 | MS.gene86521:intron | 25.0% |
| ! | GTCCTTATTAAAGCAAAATA+AGG | - | chr5.1:15257536-15257555 | None:intergenic | 25.0% |
| ! | TAGTAGTAAAACAATATGGA+AGG | - | chr5.1:15253009-15253028 | None:intergenic | 25.0% |
| ! | TATAATGTTTGTTTAAGTCC+TGG | + | chr5.1:15256551-15256570 | MS.gene86521:intron | 25.0% |
| ! | TATATGTAACAAATCCATGA+TGG | - | chr5.1:15256535-15256554 | None:intergenic | 25.0% |
| ! | TATGATGTCTAAAAAATTGG+AGG | + | chr5.1:15253845-15253864 | MS.gene86521:intron | 25.0% |
| ! | TCAAGTTAAATATGATTGTG+TGG | + | chr5.1:15254596-15254615 | MS.gene86521:intron | 25.0% |
| ! | TCCAAAAATAGTAAATCCTT+TGG | - | chr5.1:15255244-15255263 | None:intergenic | 25.0% |
| ! | TCCAAATAACATATATCTTG+TGG | + | chr5.1:15258132-15258151 | MS.gene86521:CDS | 25.0% |
| ! | TCCACAAGATATATGTTATT+TGG | - | chr5.1:15258136-15258155 | None:intergenic | 25.0% |
| ! | TGAAACAAACCTAAAATATG+GGG | - | chr5.1:15253899-15253918 | None:intergenic | 25.0% |
| ! | TGGAAATTAAATTTACTTCC+AGG | - | chr5.1:15257102-15257121 | None:intergenic | 25.0% |
| ! | TGTTGAAGATTTGATCTTAA+AGG | - | chr5.1:15253711-15253730 | None:intergenic | 25.0% |
| ! | TTAAAGAAGGAAGGTAAATA+TGG | - | chr5.1:15257056-15257075 | None:intergenic | 25.0% |
| ! | TTAGTCAATGTTCAAGATTA+AGG | - | chr5.1:15258221-15258240 | None:intergenic | 25.0% |
| ! | TTCTTCACATTTAAGAATGT+GGG | - | chr5.1:15254318-15254337 | None:intergenic | 25.0% |
| ! | TTTGAACATACACATATTTG+AGG | + | chr5.1:15255850-15255869 | MS.gene86521:intron | 25.0% |
| !! | ACCAAAGGATTTACTATTTT+TGG | + | chr5.1:15255240-15255259 | MS.gene86521:intron | 25.0% |
| !! | AGAGTTCATATAATTTTGAG+TGG | - | chr5.1:15254788-15254807 | None:intergenic | 25.0% |
| !! | ATTATCTGATAATGAGTTGA+TGG | + | chr5.1:15258968-15258987 | MS.gene86521:CDS | 25.0% |
| !! | CCATTATAAAAGTAGCTTTT+GGG | + | chr5.1:15258347-15258366 | MS.gene86521:CDS | 25.0% |
| !! | CGATTTGAAACTCTTAAAAT+TGG | + | chr5.1:15254674-15254693 | MS.gene86521:intron | 25.0% |
| !! | GAATTTTTCTTTTAGTGGTT+AGG | + | chr5.1:15255155-15255174 | MS.gene86521:intron | 25.0% |
| !! | TTAGGTTTGTTTCAAAACTT+TGG | + | chr5.1:15253905-15253924 | MS.gene86521:intron | 25.0% |
| !! | TTGATTTTATCAAACCATCA+TGG | + | chr5.1:15256518-15256537 | MS.gene86521:intron | 25.0% |
| !!! | CGAAAAGTTGGTATATTTAT+AGG | + | chr5.1:15254955-15254974 | MS.gene86521:intron | 25.0% |
| !!! | GTCCTTATTTTGCTTTAATA+AGG | + | chr5.1:15257531-15257550 | MS.gene86521:intron | 25.0% |
| !!! | TAGTTGAATTTTTTTGACAC+AGG | + | chr5.1:15254198-15254217 | MS.gene86521:intron | 25.0% |
| !!! | TGATTTTATTTGAAGCATGT+AGG | + | chr5.1:15253348-15253367 | MS.gene86521:intron | 25.0% |
| !!! | TTTACAGAGTTGATGATTTT+AGG | + | chr5.1:15255340-15255359 | MS.gene86521:intron | 25.0% |
| AAATTAAGCACATGCATTGT+TGG | - | chr5.1:15256236-15256255 | None:intergenic | 30.0% | |
| AACATATATCTTGTGGACAT+GGG | + | chr5.1:15258139-15258158 | MS.gene86521:CDS | 30.0% | |
| AAGAAAGAAAATGAGTAGAC+AGG | - | chr5.1:15254751-15254770 | None:intergenic | 30.0% | |
| AAGAAGCTACTAGAATTGAT+GGG | - | chr5.1:15255916-15255935 | None:intergenic | 30.0% | |
| ACATTGAATCGCTGAAATTT+CGG | + | chr5.1:15255761-15255780 | MS.gene86521:intron | 30.0% | |
| AGAAAGAAAATGAGTAGACA+GGG | - | chr5.1:15254750-15254769 | None:intergenic | 30.0% | |
| AGGACTAAACTTAAAATTCG+TGG | - | chr5.1:15257516-15257535 | None:intergenic | 30.0% | |
| AGTAGATATTCTATGAAGCA+CGG | - | chr5.1:15258653-15258672 | None:intergenic | 30.0% | |
| ATACCTGAAACAAAGCAAAA+TGG | - | chr5.1:15258018-15258037 | None:intergenic | 30.0% | |
| ATAGTAAAGTGGAACAAAGT+AGG | + | chr5.1:15255485-15255504 | MS.gene86521:CDS | 30.0% | |
| ATATTCATCTTGTTCGTCAA+AGG | - | chr5.1:15258946-15258965 | None:intergenic | 30.0% | |
| ATCATTAGAAGATGACTTCA+AGG | + | chr5.1:15257137-15257156 | MS.gene86521:CDS | 30.0% | |
| ATCCAAAATACACTTCTAGT+AGG | - | chr5.1:15255719-15255738 | None:intergenic | 30.0% | |
| ATCCAAGTTAACTGGTTATA+GGG | + | chr5.1:15255936-15255955 | MS.gene86521:intron | 30.0% | |
| ATTATATGCTCTTGTAACAC+AGG | + | chr5.1:15258517-15258536 | MS.gene86521:CDS | 30.0% | |
| ATTGACAACAATCATGTAGA+TGG | + | chr5.1:15258713-15258732 | MS.gene86521:intron | 30.0% | |
| ATTTCACTACCAATCATGTT+AGG | + | chr5.1:15253755-15253774 | MS.gene86521:intron | 30.0% | |
| ATTTGATGAACAAACATCCA+AGG | + | chr5.1:15258758-15258777 | MS.gene86521:CDS | 30.0% | |
| CAAACAAACACCTAAAATGA+GGG | + | chr5.1:15254867-15254886 | MS.gene86521:intron | 30.0% | |
| CATATAATACACCAAATGGT+GGG | + | chr5.1:15256662-15256681 | MS.gene86521:intron | 30.0% | |
| CATTCTTAAATGTGAAGAAG+TGG | + | chr5.1:15254319-15254338 | MS.gene86521:intron | 30.0% | |
| CCATGTCCACATAAATATAT+AGG | + | chr5.1:15255445-15255464 | MS.gene86521:CDS | 30.0% | |
| CCTATATATTTATGTGGACA+TGG | - | chr5.1:15255448-15255467 | None:intergenic | 30.0% | |
| CTTCTTCACATTTAAGAATG+TGG | - | chr5.1:15254319-15254338 | None:intergenic | 30.0% | |
| CTTTAAGCCTACAAATGTAT+TGG | - | chr5.1:15253185-15253204 | None:intergenic | 30.0% | |
| GAAAGTGAACTCATCATTAT+TGG | - | chr5.1:15259066-15259085 | None:intergenic | 30.0% | |
| GCTTACAATAATTGGAATCA+AGG | - | chr5.1:15257771-15257790 | None:intergenic | 30.0% | |
| GTCACTAAAACAATGACTTT+AGG | - | chr5.1:15253871-15253890 | None:intergenic | 30.0% | |
| GTGTCACGATTTATTCAAAT+CGG | - | chr5.1:15254645-15254664 | None:intergenic | 30.0% | |
| GTTAGGAAATAGAGAAAAGA+AGG | + | chr5.1:15255172-15255191 | MS.gene86521:CDS | 30.0% | |
| GTTTGTTTCAAAACTTTGGA+TGG | + | chr5.1:15253909-15253928 | MS.gene86521:intron | 30.0% | |
| TAACATATATCTTGTGGACA+TGG | + | chr5.1:15258138-15258157 | MS.gene86521:CDS | 30.0% | |
| TAAGAAGCTACTAGAATTGA+TGG | - | chr5.1:15255917-15255936 | None:intergenic | 30.0% | |
| TATCCAAGTTAACTGGTTAT+AGG | + | chr5.1:15255935-15255954 | MS.gene86521:intron | 30.0% | |
| TCAAAAAATGTGGTTGCTTA+AGG | - | chr5.1:15254165-15254184 | None:intergenic | 30.0% | |
| TCAAGTGATATTAGCAAGAA+TGG | + | chr5.1:15257886-15257905 | MS.gene86521:CDS | 30.0% | |
| TCAATGTTAAAACTATGGCT+TGG | - | chr5.1:15253320-15253339 | None:intergenic | 30.0% | |
| TCACCACCTATATATTTATG+TGG | - | chr5.1:15255454-15255473 | None:intergenic | 30.0% | |
| TCCAAAATACACTTCTAGTA+GGG | - | chr5.1:15255718-15255737 | None:intergenic | 30.0% | |
| TGAACTTACTACTAAGTACT+TGG | + | chr5.1:15255663-15255682 | MS.gene86521:intron | 30.0% | |
| TGTAATTATATGTGTCGTGT+CGG | + | chr5.1:15258575-15258594 | MS.gene86521:intron | 30.0% | |
| TGTCACGATTTATTCAAATC+GGG | - | chr5.1:15254644-15254663 | None:intergenic | 30.0% | |
| TGTCCACATAAATATATAGG+TGG | + | chr5.1:15255448-15255467 | MS.gene86521:CDS | 30.0% | |
| TTATCATAGACTTGAAGAGT+TGG | - | chr5.1:15255274-15255293 | None:intergenic | 30.0% | |
| TTGACAACAATCATGTAGAT+GGG | + | chr5.1:15258714-15258733 | MS.gene86521:intron | 30.0% | |
| TTGGAACTCATATATACCAT+TGG | - | chr5.1:15256217-15256236 | None:intergenic | 30.0% | |
| ! | AAAAAGAAGCATGTAAAGCT+AGG | + | chr5.1:15258807-15258826 | MS.gene86521:CDS | 30.0% |
| ! | AAGTGGTGATAGAAAACTTT+TGG | + | chr5.1:15254895-15254914 | MS.gene86521:intron | 30.0% |
| ! | ACAAGAATATGGTTAGTCAT+TGG | - | chr5.1:15256819-15256838 | None:intergenic | 30.0% |
| ! | AGTGGTGATAGAAAACTTTT+GGG | + | chr5.1:15254896-15254915 | MS.gene86521:intron | 30.0% |
| ! | ATTTTTGTGCCTAACATGAT+TGG | - | chr5.1:15253767-15253786 | None:intergenic | 30.0% |
| ! | CAGCTTTGTGAAACAATTTA+AGG | - | chr5.1:15255645-15255664 | None:intergenic | 30.0% |
| ! | CTGGTAAGAATTTTTACCAA+AGG | + | chr5.1:15255225-15255244 | MS.gene86521:intron | 30.0% |
| ! | GCCATTATAAAAGTAGCTTT+TGG | + | chr5.1:15258346-15258365 | MS.gene86521:CDS | 30.0% |
| ! | GCTAATCCGATATAATTTTC+AGG | + | chr5.1:15257722-15257741 | MS.gene86521:intron | 30.0% |
| ! | TACAAGAGCATATAATGGAA+GGG | - | chr5.1:15258513-15258532 | None:intergenic | 30.0% |
| ! | TGTGTTACAAGAGCATATAA+TGG | - | chr5.1:15258518-15258537 | None:intergenic | 30.0% |
| ! | TTACAAGAGCATATAATGGA+AGG | - | chr5.1:15258514-15258533 | None:intergenic | 30.0% |
| ! | TTGTCAATTAGTTTAGTGCT+TGG | + | chr5.1:15254289-15254308 | MS.gene86521:intron | 30.0% |
| !! | ATCCGATATAATTTTCAGGA+TGG | + | chr5.1:15257726-15257745 | MS.gene86521:intron | 30.0% |
| !! | GCTTCTTTAGACAGTTTTAT+AGG | + | chr5.1:15256856-15256875 | MS.gene86521:CDS | 30.0% |
| !! | TCAGATAGATACTTTTGGTT+AGG | + | chr5.1:15257965-15257984 | MS.gene86521:CDS | 30.0% |
| !! | TCATACAAGTTTTTGGACTA+GGG | + | chr5.1:15256408-15256427 | MS.gene86521:CDS | 30.0% |
| !!! | AACCACATTTTTTGAATGGA+GGG | + | chr5.1:15254170-15254189 | MS.gene86521:intron | 30.0% |
| !!! | AAGCAACCACATTTTTTGAA+TGG | + | chr5.1:15254166-15254185 | MS.gene86521:intron | 30.0% |
| !!! | CCCAAAAGCTACTTTTATAA+TGG | - | chr5.1:15258350-15258369 | None:intergenic | 30.0% |
| !!! | TATCCATTTTGCTTTGTTTC+AGG | + | chr5.1:15258012-15258031 | MS.gene86521:CDS | 30.0% |
| !!! | TGGATTTTAGTTGTTCTCAT+TGG | - | chr5.1:15258378-15258397 | None:intergenic | 30.0% |
| AAAACACATGAAAGACTGCT+AGG | - | chr5.1:15256019-15256038 | None:intergenic | 35.0% | |
| AACAAACCTAAAATATGGGG+AGG | - | chr5.1:15253896-15253915 | None:intergenic | 35.0% | |
| AGAATATGAGGATGTGTAAC+TGG | - | chr5.1:15255995-15256014 | None:intergenic | 35.0% | |
| AGCTTCTTATCCAAGTTAAC+TGG | + | chr5.1:15255928-15255947 | MS.gene86521:intron | 35.0% | |
| AGTCCATTCACAGATAAAAG+TGG | - | chr5.1:15255969-15255988 | None:intergenic | 35.0% | |
| ATGAGCAAGATACAGAAGAT+AGG | + | chr5.1:15259021-15259040 | MS.gene86521:CDS | 35.0% | |
| ATTTGTGAAGACTCTTCTCA+AGG | - | chr5.1:15252860-15252879 | None:intergenic | 35.0% | |
| CAACACGCTTAATTTCCAAT+AGG | - | chr5.1:15253388-15253407 | None:intergenic | 35.0% | |
| CCAAACAAACACCTAAAATG+AGG | + | chr5.1:15254866-15254885 | MS.gene86521:intron | 35.0% | |
| CGCCATCCTGAAAATTATAT+CGG | - | chr5.1:15257731-15257750 | None:intergenic | 35.0% | |
| CTAAAATGAGGGATCAAAAG+TGG | + | chr5.1:15254878-15254897 | MS.gene86521:intron | 35.0% | |
| GAGAAGAGTCTTCACAAATT+AGG | + | chr5.1:15252861-15252880 | MS.gene86521:CDS | 35.0% | |
| GAGAAGGAAAAAAGGAAACA+TGG | - | chr5.1:15255581-15255600 | None:intergenic | 35.0% | |
| GAGAGACATATAGTTGTACA+AGG | + | chr5.1:15257923-15257942 | MS.gene86521:CDS | 35.0% | |
| GAGTCTTCACAAATTAGGAA+CGG | + | chr5.1:15252866-15252885 | MS.gene86521:CDS | 35.0% | |
| GCATATAATACACCAAATGG+TGG | + | chr5.1:15256661-15256680 | MS.gene86521:intron | 35.0% | |
| GCTGCATATAATACACCAAA+TGG | + | chr5.1:15256658-15256677 | MS.gene86521:intron | 35.0% | |
| GTTTCTCACCATGAATGTTT+AGG | - | chr5.1:15257320-15257339 | None:intergenic | 35.0% | |
| TTAATTTCAATGGGGTTTGC+AGG | + | chr5.1:15258456-15258475 | MS.gene86521:intron | 35.0% | |
| TTCCCTCCATTCAAAAAATG+TGG | - | chr5.1:15254175-15254194 | None:intergenic | 35.0% | |
| TTCTTGCTCCTAAACATTCA+TGG | + | chr5.1:15257309-15257328 | MS.gene86521:CDS | 35.0% | |
| TTTGTGAAGACTCTTCTCAA+GGG | - | chr5.1:15252859-15252878 | None:intergenic | 35.0% | |
| ! | AAGGCTCAGATAGATACTTT+TGG | + | chr5.1:15257960-15257979 | MS.gene86521:CDS | 35.0% |
| ! | CACTTTTGATCCCTCATTTT+AGG | - | chr5.1:15254880-15254899 | None:intergenic | 35.0% |
| ! | CATCCAAGGCATTAAAGAAA+TGG | + | chr5.1:15258772-15258791 | MS.gene86521:CDS | 35.0% |
| ! | GCTGTTCCACTGAATATTTT+GGG | + | chr5.1:15253150-15253169 | MS.gene86521:intron | 35.0% |
| ! | GTGGTGATAGAAAACTTTTG+GGG | + | chr5.1:15254897-15254916 | MS.gene86521:intron | 35.0% |
| ! | TCAGAGCTCATACAAGTTTT+TGG | + | chr5.1:15256401-15256420 | MS.gene86521:CDS | 35.0% |
| ! | TCTTGTTTGTGTCTCTTCTA+TGG | + | chr5.1:15252717-15252736 | MS.gene86521:CDS | 35.0% |
| !! | AGAAAACTTTTGGGGACTAA+AGG | + | chr5.1:15254905-15254924 | MS.gene86521:intron | 35.0% |
| !! | CAAGACAATTTGTTATGCCA+CGG | - | chr5.1:15253074-15253093 | None:intergenic | 35.0% |
| !! | CCTCATTTTAGGTGTTTGTT+TGG | - | chr5.1:15254869-15254888 | None:intergenic | 35.0% |
| !! | CTCATACAAGTTTTTGGACT+AGG | + | chr5.1:15256407-15256426 | MS.gene86521:CDS | 35.0% |
| !! | GAACCACTTTTATCTGTGAA+TGG | + | chr5.1:15255963-15255982 | MS.gene86521:CDS | 35.0% |
| !! | TCACGTTTTGTTGGAAATCA+AGG | - | chr5.1:15254831-15254850 | None:intergenic | 35.0% |
| !! | TTCCACTGAATATTTTGGGA+GGG | + | chr5.1:15253154-15253173 | MS.gene86521:intron | 35.0% |
| !!! | CAACCACATTTTTTGAATGG+AGG | + | chr5.1:15254169-15254188 | MS.gene86521:intron | 35.0% |
| !!! | TTGCAGATAATTTTGGCTGT+TGG | + | chr5.1:15257854-15257873 | MS.gene86521:intron | 35.0% |
| AAAGACTACCATAGGAACCA+TGG | + | chr5.1:15258830-15258849 | MS.gene86521:CDS | 40.0% | |
| AACAGCCTCTTGTGTAAAAC+AGG | + | chr5.1:15256630-15256649 | MS.gene86521:intron | 40.0% | |
| AAGCTAGGAAAGACTACCAT+AGG | + | chr5.1:15258822-15258841 | MS.gene86521:CDS | 40.0% | |
| AATGCTTCTTGGAAGACTCA+AGG | + | chr5.1:15256052-15256071 | MS.gene86521:CDS | 40.0% | |
| ACAGCCTCTTGTGTAAAACA+GGG | + | chr5.1:15256631-15256650 | MS.gene86521:intron | 40.0% | |
| ACTTGATCAAACACCGACAT+GGG | + | chr5.1:15252791-15252810 | MS.gene86521:CDS | 40.0% | |
| AGAAACCAGATTAGCAAGAC+GGG | - | chr5.1:15256460-15256479 | None:intergenic | 40.0% | |
| AGAAGATAGGCATCATAGTG+AGG | + | chr5.1:15259034-15259053 | MS.gene86521:CDS | 40.0% | |
| AGACAATAATATGTAGGGGC+CGG | - | chr5.1:15254364-15254383 | None:intergenic | 40.0% | |
| AGACTGCTAGGAAGAATATG+AGG | - | chr5.1:15256007-15256026 | None:intergenic | 40.0% | |
| AGCCTACAAATGTATTGGAC+CGG | - | chr5.1:15253180-15253199 | None:intergenic | 40.0% | |
| ATAATCTGTGATCCGAAACC+CGG | + | chr5.1:15254342-15254361 | MS.gene86521:intron | 40.0% | |
| ATAGAATTTATGGAGGGACG+AGG | + | chr5.1:15257623-15257642 | MS.gene86521:intron | 40.0% | |
| ATTTACTTCCAGGAGCTAGA+TGG | - | chr5.1:15257092-15257111 | None:intergenic | 40.0% | |
| CGTGTTACAATTTCTGTGCA+TGG | - | chr5.1:15254716-15254735 | None:intergenic | 40.0% | |
| CTCTTGTGTAAAACAGGGTA+AGG | + | chr5.1:15256636-15256655 | MS.gene86521:intron | 40.0% | |
| CTGCATTGTTGATCCAACAA+TGG | - | chr5.1:15258865-15258884 | None:intergenic | 40.0% | |
| CTTCACCGTTTCAAAACTAC+CGG | + | chr5.1:15258900-15258919 | MS.gene86521:CDS | 40.0% | |
| CTTCTATGGAGGTTTATCCA+TGG | + | chr5.1:15252731-15252750 | MS.gene86521:CDS | 40.0% | |
| GAAGATAGGCATCATAGTGA+GGG | + | chr5.1:15259035-15259054 | MS.gene86521:CDS | 40.0% | |
| GAGAAACCAGATTAGCAAGA+CGG | - | chr5.1:15256461-15256480 | None:intergenic | 40.0% | |
| GAGGAAGAGACTTTAACTCA+TGG | + | chr5.1:15256180-15256199 | MS.gene86521:CDS | 40.0% | |
| GAGGGACTAAAACGAAAAGT+TGG | + | chr5.1:15254943-15254962 | MS.gene86521:intron | 40.0% | |
| GATGAAAACAGTGCAAACAG+CGG | - | chr5.1:15252823-15252842 | None:intergenic | 40.0% | |
| GCTGGAAAATTGTTTCCGTT+TGG | + | chr5.1:15258312-15258331 | MS.gene86521:CDS | 40.0% | |
| GTCATGTGACTGAAAAGTCA+CGG | + | chr5.1:15256593-15256612 | MS.gene86521:intron | 40.0% | |
| GTCCCTATAACCAGTTAACT+TGG | - | chr5.1:15255941-15255960 | None:intergenic | 40.0% | |
| TAAATCCATTGCGCAAAGTC+TGG | - | chr5.1:15256902-15256921 | None:intergenic | 40.0% | |
| TAGGTGTTTGTTTGGATGTG+CGG | - | chr5.1:15254861-15254880 | None:intergenic | 40.0% | |
| TATGAAGCACGGACAATCTT+CGG | - | chr5.1:15258642-15258661 | None:intergenic | 40.0% | |
| TCATGTGACTGAAAAGTCAC+GGG | + | chr5.1:15256594-15256613 | MS.gene86521:intron | 40.0% | |
| TGGCAAGCTTATAGTCCAAA+CGG | - | chr5.1:15258330-15258349 | None:intergenic | 40.0% | |
| TGTTTGTGTCTCTTCTATGG+AGG | + | chr5.1:15252720-15252739 | MS.gene86521:CDS | 40.0% | |
| TTTAAACAGTCCTGTCCTCT+GGG | + | chr5.1:15257272-15257291 | MS.gene86521:intron | 40.0% | |
| ! | ATCTAGGAGGCGCAAATTTA+TGG | + | chr5.1:15257654-15257673 | MS.gene86521:intron | 40.0% |
| ! | ATTGAAGTTTTCTCTTGCCG+TGG | + | chr5.1:15253054-15253073 | MS.gene86521:intron | 40.0% |
| ! | CAATCATGTAGATGGGTTCA+AGG | + | chr5.1:15258721-15258740 | MS.gene86521:intron | 40.0% |
| ! | CTTACCCTGTTTTACACAAG+AGG | - | chr5.1:15256638-15256657 | None:intergenic | 40.0% |
| ! | GGCTGTTCCACTGAATATTT+TGG | + | chr5.1:15253149-15253168 | MS.gene86521:intron | 40.0% |
| ! | TATCTACCTTCAAAAGGCAC+TGG | - | chr5.1:15255514-15255533 | None:intergenic | 40.0% |
| ! | TCTAGGAGGCGCAAATTTAT+GGG | + | chr5.1:15257655-15257674 | MS.gene86521:intron | 40.0% |
| ! | TTTGCAGTATTCTTTTGGGC+TGG | + | chr5.1:15258294-15258313 | MS.gene86521:intron | 40.0% |
| ! | TTTGGAGCTTCGCAAAATCA+CGG | + | chr5.1:15255795-15255814 | MS.gene86521:intron | 40.0% |
| ! | TTTTAAACAGTCCTGTCCTC+TGG | + | chr5.1:15257271-15257290 | MS.gene86521:intron | 40.0% |
| !! | AACTTTTGGGGACTAAAGGT+TGG | + | chr5.1:15254909-15254928 | MS.gene86521:intron | 40.0% |
| !! | GACATTGATTTGTGGCCTAT+TGG | + | chr5.1:15253370-15253389 | MS.gene86521:intron | 40.0% |
| !! | GCATGTAGGACATTGATTTG+TGG | + | chr5.1:15253362-15253381 | MS.gene86521:intron | 40.0% |
| !! | GCCCTACTAGAAGTGTATTT+TGG | + | chr5.1:15255714-15255733 | MS.gene86521:intron | 40.0% |
| !! | GTGCCATTTCTTTAATGCCT+TGG | - | chr5.1:15258778-15258797 | None:intergenic | 40.0% |
| !! | GTTCCACTGAATATTTTGGG+AGG | + | chr5.1:15253153-15253172 | MS.gene86521:intron | 40.0% |
| !! | TCTGCTTGAAGCTCTAGAAA+AGG | + | chr5.1:15255196-15255215 | MS.gene86521:CDS | 40.0% |
| !! | TGAAGCTCTAGAAAAGGTCA+AGG | + | chr5.1:15255202-15255221 | MS.gene86521:CDS | 40.0% |
| !!! | GTTTTGTTTCTGCAGATACG+TGG | + | chr5.1:15256144-15256163 | MS.gene86521:intron | 40.0% |
| AAAGTCACGGGTTCAAGTCA+TGG | + | chr5.1:15256606-15256625 | MS.gene86521:intron | 45.0% | |
| AACAAACATTAAGGGCAGCC+CGG | - | chr5.1:15256728-15256747 | None:intergenic | 45.0% | |
| AAGACTCTTCTCAAGGGCTA+TGG | - | chr5.1:15252853-15252872 | None:intergenic | 45.0% | |
| ACTACCATAGGAACCATGGA+TGG | + | chr5.1:15258834-15258853 | MS.gene86521:CDS | 45.0% | |
| AGATACGTGGATGGAAGGAA+TGG | + | chr5.1:15256157-15256176 | MS.gene86521:intron | 45.0% | |
| AGATGACTTCAAGGTAGTCG+TGG | + | chr5.1:15257146-15257165 | MS.gene86521:CDS | 45.0% | |
| AGGATGGCGTACTCCAATAT+GGG | + | chr5.1:15257742-15257761 | MS.gene86521:intron | 45.0% | |
| AGGTTGAAGATCGTGTTGAG+TGG | - | chr5.1:15258926-15258945 | None:intergenic | 45.0% | |
| AGTGCTGTCACAATGCTTCT+TGG | + | chr5.1:15256041-15256060 | MS.gene86521:CDS | 45.0% | |
| ATGGATGGTAGCACCATTGT+TGG | + | chr5.1:15258849-15258868 | MS.gene86521:CDS | 45.0% | |
| CAAGGAATGCCTCTTGTTCA+AGG | + | chr5.1:15257941-15257960 | MS.gene86521:CDS | 45.0% | |
| CACTTGATCAAACACCGACA+TGG | + | chr5.1:15252790-15252809 | MS.gene86521:CDS | 45.0% | |
| CATGGTTATGAGTTCGCCAA+TGG | + | chr5.1:15256198-15256217 | MS.gene86521:CDS | 45.0% | |
| CGAGGAGAACTAAATCTAGG+AGG | + | chr5.1:15257641-15257660 | MS.gene86521:intron | 45.0% | |
| CTATCTGAGCCTTGAACAAG+AGG | - | chr5.1:15257953-15257972 | None:intergenic | 45.0% | |
| CTGCAACTGCAAGTGATAGT+AGG | + | chr5.1:15252754-15252773 | MS.gene86521:CDS | 45.0% | |
| CTTGATCAAACACCGACATG+GGG | + | chr5.1:15252792-15252811 | MS.gene86521:CDS | 45.0% | |
| GACAATAATATGTAGGGGCC+GGG | - | chr5.1:15254363-15254382 | None:intergenic | 45.0% | |
| GACGGGACGCACAATATAAA+AGG | - | chr5.1:15256443-15256462 | None:intergenic | 45.0% | |
| GATACGTGGATGGAAGGAAT+GGG | + | chr5.1:15256158-15256177 | MS.gene86521:intron | 45.0% | |
| GATGACTTCAAGGTAGTCGT+GGG | + | chr5.1:15257147-15257166 | MS.gene86521:CDS | 45.0% | |
| GATTACCAGACTTTGCGCAA+TGG | + | chr5.1:15256894-15256913 | MS.gene86521:CDS | 45.0% | |
| GGAATCAAGGATGCCCATAT+TGG | - | chr5.1:15257758-15257777 | None:intergenic | 45.0% | |
| GGACGAGGAGAACTAAATCT+AGG | + | chr5.1:15257638-15257657 | MS.gene86521:intron | 45.0% | |
| GTGCAGATGCTGCAAAATTC+AGG | + | chr5.1:15256356-15256375 | MS.gene86521:intron | 45.0% | |
| TACCTTCCTGCTGCATTTGA+AGG | - | chr5.1:15255557-15255576 | None:intergenic | 45.0% | |
| TAGCACTCCTTGTGCTAGTT+TGG | + | chr5.1:15257441-15257460 | MS.gene86521:intron | 45.0% | |
| TCGGGACACAATTTGAAGAG+CGG | - | chr5.1:15254626-15254645 | None:intergenic | 45.0% | |
| TTCCTGCTGCATTTGAAGGA+GGG | - | chr5.1:15255553-15255572 | None:intergenic | 45.0% | |
| TTCTGCAACAACAATTGCGC+AGG | - | chr5.1:15256977-15256996 | None:intergenic | 45.0% | |
| ! | AGGAAACCAGTGCCTTTTGA+AGG | + | chr5.1:15255505-15255524 | MS.gene86521:CDS | 45.0% |
| ! | GTTTTATAGGTCTGTGCGCA+AGG | + | chr5.1:15256869-15256888 | MS.gene86521:CDS | 45.0% |
| ! | TATATGTGTCGTGTCGGTGT+CGG | + | chr5.1:15258581-15258600 | MS.gene86521:intron | 45.0% |
| ! | TGACAGCCTCCCCATATTTT+AGG | + | chr5.1:15253887-15253906 | MS.gene86521:intron | 45.0% |
| ! | TGGTGCACGACATTTTTACG+AGG | - | chr5.1:15256799-15256818 | None:intergenic | 45.0% |
| ! | TGTTTCTGCAGATACGTGGA+TGG | + | chr5.1:15256148-15256167 | MS.gene86521:intron | 45.0% |
| !! | AACAATGGTGCTACCATCCA+TGG | - | chr5.1:15258850-15258869 | None:intergenic | 45.0% |
| !! | ACTGAATATTTTGGGAGGGC+CGG | + | chr5.1:15253158-15253177 | MS.gene86521:intron | 45.0% |
| !! | TAGCACAAGGAGTGCTAGAA+CGG | - | chr5.1:15257438-15257457 | None:intergenic | 45.0% |
| !!! | AGTGGCCGGTAGTTTTGAAA+CGG | - | chr5.1:15258908-15258927 | None:intergenic | 45.0% |
| !!! | GTTTTGAAACGGTGAAGTGC+TGG | - | chr5.1:15258897-15258916 | None:intergenic | 45.0% |
| !! | AATTATTATTATGAAATAAA+GGG | - | chr5.1:15253127-15253146 | None:intergenic | 5.0% |
| !! | TAATTATTATTATGAAATAA+AGG | - | chr5.1:15253128-15253147 | None:intergenic | 5.0% |
| !! | TTATTTCATAATAATAATTA+TGG | + | chr5.1:15253128-15253147 | MS.gene86521:intron | 5.0% |
| AAACTACAGCTGATGCCCAG+AGG | - | chr5.1:15257290-15257309 | None:intergenic | 50.0% | |
| AATATGTAGGGGCCGGGTTT+CGG | - | chr5.1:15254357-15254376 | None:intergenic | 50.0% | |
| ACAACTTTACCAGTTGCGCC+AGG | - | chr5.1:15256572-15256591 | None:intergenic | 50.0% | |
| ACTGCTGCCAAACTAGCACA+AGG | - | chr5.1:15257451-15257470 | None:intergenic | 50.0% | |
| ATCACTTGCAGTTGCAGCCA+TGG | - | chr5.1:15252751-15252770 | None:intergenic | 50.0% | |
| CAGGATGGCGTACTCCAATA+TGG | + | chr5.1:15257741-15257760 | MS.gene86521:intron | 50.0% | |
| CTCCTTCAAATGCAGCAGGA+AGG | + | chr5.1:15255552-15255571 | MS.gene86521:CDS | 50.0% | |
| CTTCCTGCTGCATTTGAAGG+AGG | - | chr5.1:15255554-15255573 | None:intergenic | 50.0% | |
| GAAGGGTAATGTAGCTGCAG+AGG | - | chr5.1:15258496-15258515 | None:intergenic | 50.0% | |
| GCTACCATCCATGGTTCCTA+TGG | - | chr5.1:15258841-15258860 | None:intergenic | 50.0% | |
| GGCCCTCCCAAAATATTCAG+TGG | - | chr5.1:15253159-15253178 | None:intergenic | 50.0% | |
| GGCCGGTCCAATACATTTGT+AGG | + | chr5.1:15253175-15253194 | MS.gene86521:intron | 50.0% | |
| TCAAGGTAGTCGTGGGAGTA+AGG | + | chr5.1:15257154-15257173 | MS.gene86521:CDS | 50.0% | |
| TCTGCAGATACGTGGATGGA+AGG | + | chr5.1:15256152-15256171 | MS.gene86521:intron | 50.0% | |
| TGAAGATCGTGTTGAGTGGC+CGG | - | chr5.1:15258922-15258941 | None:intergenic | 50.0% | |
| TGTTTAAGTCCTGGCGCAAC+TGG | + | chr5.1:15256560-15256579 | MS.gene86521:intron | 50.0% | |
| ! | CTTTTACGCTGACACAGCTG+CGG | + | chr5.1:15257007-15257026 | MS.gene86521:intron | 50.0% |
| ! | GGCTGCAACTCACGTTTTGT+TGG | - | chr5.1:15254840-15254859 | None:intergenic | 50.0% |
| ! | GTATAGGTCCATCTAGCTCC+TGG | + | chr5.1:15257081-15257100 | MS.gene86521:intron | 50.0% |
| ! | GTGCTAGTTTGGCAGCAGTT+TGG | + | chr5.1:15257452-15257471 | MS.gene86521:intron | 50.0% |
| !! | GCTCTAGAAAAGGTCAAGGC+TGG | + | chr5.1:15255206-15255225 | MS.gene86521:CDS | 50.0% |
| ACACGACATGTGTCCGACAC+TGG | + | chr5.1:15258604-15258623 | MS.gene86521:intron | 55.0% | |
| ACGTGGATGGAAGGAATGGG+AGG | + | chr5.1:15256161-15256180 | MS.gene86521:CDS | 55.0% | |
| ACTAGAGCTCCCGCATATGC+AGG | - | chr5.1:15256702-15256721 | None:intergenic | 55.0% | |
| ATGTGTCCGACACTGGGACA+CGG | + | chr5.1:15258611-15258630 | MS.gene86521:intron | 55.0% | |
| CACGACATGTGTCCGACACT+GGG | + | chr5.1:15258605-15258624 | MS.gene86521:intron | 55.0% | |
| CTAGAGCTCCCGCATATGCA+GGG | - | chr5.1:15256701-15256720 | None:intergenic | 55.0% | |
| CTCCCTCCTTCAAATGCAGC+AGG | + | chr5.1:15255548-15255567 | MS.gene86521:CDS | 55.0% | |
| GGATCAACAATGCAGTCCCC+TGG | + | chr5.1:15258870-15258889 | MS.gene86521:CDS | 55.0% | |
| TGCGTCCCGTCTTGCTAATC+TGG | + | chr5.1:15256452-15256471 | MS.gene86521:intron | 55.0% | |
| ! | CAAATGGTGGGACTCCTTCC+CGG | + | chr5.1:15256674-15256693 | MS.gene86521:intron | 55.0% |
| ! | GATTAGCCGTGTCCCAGTGT+CGG | - | chr5.1:15258620-15258639 | None:intergenic | 55.0% |
| !! | AAACGGTGAAGTGCTGGTCC+AGG | - | chr5.1:15258891-15258910 | None:intergenic | 55.0% |
| !! | AACGGTGAAGTGCTGGTCCA+GGG | - | chr5.1:15258890-15258909 | None:intergenic | 55.0% |
| ACAGCGGCAACACCCCATGT+CGG | - | chr5.1:15252807-15252826 | None:intergenic | 60.0% | |
| ACAGCTGATGCCCAGAGGAC+AGG | - | chr5.1:15257285-15257304 | None:intergenic | 60.0% | |
| CGGGAAGGAGTCCCACCATT+TGG | - | chr5.1:15256676-15256695 | None:intergenic | 60.0% | |
| CTTCCCGGACCCTGCATATG+CGG | + | chr5.1:15256689-15256708 | MS.gene86521:intron | 60.0% | |
| TTCCCGGACCCTGCATATGC+GGG | + | chr5.1:15256690-15256709 | MS.gene86521:intron | 60.0% | |
| ! | ATGCGGGAGCTCTAGTGCAC+CGG | + | chr5.1:15256706-15256725 | MS.gene86521:intron | 60.0% |
| !! | ACGGTGAAGTGCTGGTCCAG+GGG | - | chr5.1:15258889-15258908 | None:intergenic | 60.0% |
| CGCATATGCAGGGTCCGGGA+AGG | - | chr5.1:15256691-15256710 | None:intergenic | 65.0% | |
| CGCTGACACAGCTGCGGTTG+TGG | + | chr5.1:15257013-15257032 | MS.gene86521:intron | 65.0% | |
| CTCCCGCATATGCAGGGTCC+GGG | - | chr5.1:15256695-15256714 | None:intergenic | 65.0% | |
| GCTCCCGCATATGCAGGGTC+CGG | - | chr5.1:15256696-15256715 | None:intergenic | 65.0% | |
| ! | TGCGGGAGCTCTAGTGCACC+GGG | + | chr5.1:15256707-15256726 | MS.gene86521:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 15252699 | 15259115 | 15252699 | ID=MS.gene86521 |
| chr5.1 | mRNA | 15252699 | 15259115 | 15252699 | ID=MS.gene86521.t1;Parent=MS.gene86521 |
| chr5.1 | exon | 15252699 | 15252887 | 15252699 | ID=MS.gene86521.t1.exon1;Parent=MS.gene86521.t1 |
| chr5.1 | CDS | 15252699 | 15252887 | 15252699 | ID=cds.MS.gene86521.t1;Parent=MS.gene86521.t1 |
| chr5.1 | exon | 15255170 | 15255227 | 15255170 | ID=MS.gene86521.t1.exon2;Parent=MS.gene86521.t1 |
| chr5.1 | CDS | 15255170 | 15255227 | 15255170 | ID=cds.MS.gene86521.t1;Parent=MS.gene86521.t1 |
| chr5.1 | exon | 15255347 | 15255573 | 15255347 | ID=MS.gene86521.t1.exon3;Parent=MS.gene86521.t1 |
| chr5.1 | CDS | 15255347 | 15255573 | 15255347 | ID=cds.MS.gene86521.t1;Parent=MS.gene86521.t1 |
| chr5.1 | exon | 15255957 | 15256073 | 15255957 | ID=MS.gene86521.t1.exon4;Parent=MS.gene86521.t1 |
| chr5.1 | CDS | 15255957 | 15256073 | 15255957 | ID=cds.MS.gene86521.t1;Parent=MS.gene86521.t1 |
| chr5.1 | exon | 15256159 | 15256219 | 15256159 | ID=MS.gene86521.t1.exon5;Parent=MS.gene86521.t1 |
| chr5.1 | CDS | 15256159 | 15256219 | 15256159 | ID=cds.MS.gene86521.t1;Parent=MS.gene86521.t1 |
| chr5.1 | exon | 15256362 | 15256450 | 15256362 | ID=MS.gene86521.t1.exon6;Parent=MS.gene86521.t1 |
| chr5.1 | CDS | 15256362 | 15256450 | 15256362 | ID=cds.MS.gene86521.t1;Parent=MS.gene86521.t1 |
| chr5.1 | exon | 15256852 | 15256926 | 15256852 | ID=MS.gene86521.t1.exon7;Parent=MS.gene86521.t1 |
| chr5.1 | CDS | 15256852 | 15256926 | 15256852 | ID=cds.MS.gene86521.t1;Parent=MS.gene86521.t1 |
| chr5.1 | exon | 15257087 | 15257175 | 15257087 | ID=MS.gene86521.t1.exon8;Parent=MS.gene86521.t1 |
| chr5.1 | CDS | 15257087 | 15257175 | 15257087 | ID=cds.MS.gene86521.t1;Parent=MS.gene86521.t1 |
| chr5.1 | exon | 15257281 | 15257330 | 15257281 | ID=MS.gene86521.t1.exon9;Parent=MS.gene86521.t1 |
| chr5.1 | CDS | 15257281 | 15257330 | 15257281 | ID=cds.MS.gene86521.t1;Parent=MS.gene86521.t1 |
| chr5.1 | exon | 15257744 | 15257784 | 15257744 | ID=MS.gene86521.t1.exon10;Parent=MS.gene86521.t1 |
| chr5.1 | CDS | 15257744 | 15257784 | 15257744 | ID=cds.MS.gene86521.t1;Parent=MS.gene86521.t1 |
| chr5.1 | exon | 15257860 | 15258033 | 15257860 | ID=MS.gene86521.t1.exon11;Parent=MS.gene86521.t1 |
| chr5.1 | CDS | 15257860 | 15258033 | 15257860 | ID=cds.MS.gene86521.t1;Parent=MS.gene86521.t1 |
| chr5.1 | exon | 15258125 | 15258160 | 15258125 | ID=MS.gene86521.t1.exon12;Parent=MS.gene86521.t1 |
| chr5.1 | CDS | 15258125 | 15258160 | 15258125 | ID=cds.MS.gene86521.t1;Parent=MS.gene86521.t1 |
| chr5.1 | exon | 15258301 | 15258368 | 15258301 | ID=MS.gene86521.t1.exon13;Parent=MS.gene86521.t1 |
| chr5.1 | CDS | 15258301 | 15258368 | 15258301 | ID=cds.MS.gene86521.t1;Parent=MS.gene86521.t1 |
| chr5.1 | exon | 15258478 | 15258538 | 15258478 | ID=MS.gene86521.t1.exon14;Parent=MS.gene86521.t1 |
| chr5.1 | CDS | 15258478 | 15258538 | 15258478 | ID=cds.MS.gene86521.t1;Parent=MS.gene86521.t1 |
| chr5.1 | exon | 15258732 | 15259115 | 15258732 | ID=MS.gene86521.t1.exon15;Parent=MS.gene86521.t1 |
| chr5.1 | CDS | 15258732 | 15259115 | 15258732 | ID=cds.MS.gene86521.t1;Parent=MS.gene86521.t1 |
| Gene Sequence |
| Protein sequence |
