AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene057476


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene057476.t1 MTR_7g013180 93.358 271 15 3 1 269 1 270 0.0 508
MS.gene057476.t1 MTR_7g013180 92.105 76 6 0 261 336 371 446 2.97e-38 141
MS.gene057476.t1 MTR_7g013240 54.475 257 106 4 4 259 5 251 1.58e-95 290
MS.gene057476.t1 MTR_7g013240 54.545 77 32 1 261 334 363 439 3.97e-19 88.2
MS.gene057476.t1 MTR_7g013260 55.039 258 104 5 4 259 5 252 9.93e-95 288
MS.gene057476.t1 MTR_7g013260 51.948 77 34 1 261 334 364 440 4.16e-17 82.0
MS.gene057476.t1 MTR_7g013200 53.077 260 112 5 1 259 1 251 1.14e-90 278
MS.gene057476.t1 MTR_7g013200 59.740 77 28 1 261 334 363 439 2.92e-21 94.4
MS.gene057476.t1 MTR_7g013220 50.943 265 121 6 1 259 1 262 9.62e-88 271
MS.gene057476.t1 MTR_7g013220 60.256 78 28 1 261 335 374 451 4.52e-21 94.0
MS.gene057476.t1 MTR_3g479470 27.178 287 169 11 4 259 12 289 3.95e-22 97.1
MS.gene057476.t1 MTR_6g014186 24.828 290 175 8 4 259 6 286 1.88e-21 94.7
MS.gene057476.t1 MTR_3g479620 31.056 161 105 3 4 161 5 162 9.11e-20 85.5
MS.gene057476.t1 MTR_0036s0220 26.117 291 166 11 4 259 11 287 1.60e-19 89.4
MS.gene057476.t1 MTR_5g464810 25.965 285 172 10 5 259 12 287 1.93e-19 89.4
MS.gene057476.t1 MTR_5g064240 25.965 285 172 10 5 259 12 287 1.93e-19 89.4
MS.gene057476.t1 MTR_3g479490 26.087 299 190 9 5 278 6 298 2.77e-19 89.0
MS.gene057476.t1 MTR_3g479520 26.645 304 184 12 4 278 14 307 4.18e-19 88.2
MS.gene057476.t1 MTR_6g014290 25.000 296 176 10 1 259 1 287 6.81e-19 87.8
MS.gene057476.t1 MTR_6g014040 23.711 291 178 8 4 259 9 290 1.12e-18 87.0
MS.gene057476.t1 MTR_6g038230 29.880 251 144 10 5 244 11 240 2.03e-18 86.3
MS.gene057476.t1 MTR_6g038200 30.453 243 141 9 5 238 11 234 2.60e-17 82.8
MS.gene057476.t1 MTR_5g098960 25.461 271 178 10 1 259 3 261 3.89e-17 82.4
MS.gene057476.t1 MTR_6g014170 24.460 278 173 10 4 259 9 271 4.99e-17 82.0
MS.gene057476.t1 MTR_3g008010 23.958 288 178 9 4 259 9 287 9.36e-17 81.3
MS.gene057476.t1 MTR_3g079480 26.207 290 168 10 4 259 20 297 1.03e-16 81.3
MS.gene057476.t1 MTR_7g080960 28.070 228 139 8 5 226 12 220 1.40e-16 80.9
MS.gene057476.t1 MTR_5g035560 28.400 250 149 9 3 244 9 236 1.52e-16 80.9
MS.gene057476.t1 MTR_5g035580 29.084 251 146 9 3 244 11 238 1.88e-16 80.5
MS.gene057476.t1 MTR_4g095008 27.372 274 163 11 3 258 9 264 2.18e-16 80.5
MS.gene057476.t1 MTR_6g014020 23.448 290 179 9 4 259 9 289 2.67e-16 80.1
MS.gene057476.t1 MTR_6g014220 23.649 296 180 9 1 259 1 287 2.90e-16 79.7
MS.gene057476.t1 MTR_6g038240 26.104 249 150 9 4 240 10 236 2.98e-16 79.7
MS.gene057476.t1 MTR_2g008210 25.478 157 114 2 4 160 10 163 3.50e-16 79.7
MS.gene057476.t1 MTR_6g014250 23.693 287 178 11 5 259 10 287 4.03e-16 79.3
MS.gene057476.t1 MTR_5g464760 23.958 288 178 10 4 259 11 289 8.07e-16 78.6
MS.gene057476.t1 MTR_6g038220 28.800 250 137 10 4 238 10 233 1.23e-15 77.8
MS.gene057476.t1 MTR_6g014150 22.491 289 181 8 4 258 6 285 1.28e-15 77.8
MS.gene057476.t1 MTR_7g080940 24.101 278 163 11 5 259 11 263 1.51e-15 77.4
MS.gene057476.t1 MTR_7g080935 26.568 271 131 11 5 244 11 244 4.80e-15 76.3
MS.gene057476.t1 MTR_6g014187 23.793 290 178 9 4 259 9 289 4.88e-15 76.3
MS.gene057476.t1 MTR_7g011470 23.929 280 176 9 4 259 9 275 3.49e-14 73.6
MS.gene057476.t1 MTR_6g013990 22.917 288 181 8 4 259 9 287 4.41e-14 73.2
MS.gene057476.t1 MTR_6g013440 22.069 290 183 8 4 259 10 290 5.68e-14 72.8
MS.gene057476.t1 MTR_6g014270 22.028 286 190 8 4 259 6 288 1.10e-13 72.0
MS.gene057476.t1 MTR_0199s0010 24.375 160 114 2 5 160 10 166 1.45e-13 70.5
MS.gene057476.t1 MTR_0288s0020 22.300 287 178 9 1 259 1 270 1.86e-13 71.2
MS.gene057476.t1 MTR_6g038300 24.696 247 156 9 4 240 10 236 2.20e-13 71.2
MS.gene057476.t1 MTR_6g014310 24.138 290 177 9 4 259 10 290 3.22e-13 70.5
MS.gene057476.t1 MTR_6g013960 23.103 290 180 9 4 259 9 289 3.49e-13 70.5
MS.gene057476.t1 MTR_7g011470 23.827 277 176 9 4 259 9 271 4.16e-13 70.1
MS.gene057476.t1 MTR_6g015160 39.080 87 43 3 208 286 2 86 6.94e-13 64.3
MS.gene057476.t1 MTR_8g088560 25.833 240 155 7 3 236 8 230 6.98e-13 69.7
MS.gene057476.t1 MTR_7g080950 26.374 273 163 10 5 259 6 258 9.41e-13 69.3
MS.gene057476.t1 MTR_6g014195 23.494 166 116 3 4 161 9 171 1.13e-12 66.6
MS.gene057476.t1 MTR_6g014200 22.759 290 181 9 4 259 6 286 1.93e-12 68.2
MS.gene057476.t1 MTR_8g059425 22.414 290 178 10 4 258 9 286 2.14e-12 68.2
MS.gene057476.t1 MTR_8g083290 24.643 280 174 12 4 259 2 268 2.41e-12 67.8
MS.gene057476.t1 MTR_8g064880 25.468 267 178 10 7 258 11 271 2.94e-12 67.8
MS.gene057476.t1 MTR_1g032490 26.482 253 158 11 5 242 10 249 3.27e-12 67.4
MS.gene057476.t1 MTR_3g084520 25.000 252 161 8 3 240 4 241 8.48e-12 66.2
MS.gene057476.t1 MTR_1g107315 25.692 253 166 10 2 242 5 247 9.39e-12 66.2
MS.gene057476.t1 MTR_6g013450 21.799 289 186 9 4 259 9 290 1.74e-11 65.5
MS.gene057476.t1 MTR_8g064870 24.731 279 161 10 7 258 13 269 3.36e-11 64.3
MS.gene057476.t1 MTR_4g064987 25.092 271 164 11 5 258 8 256 4.55e-11 63.9
MS.gene057476.t1 MTR_1g107375 24.444 270 171 10 5 257 8 261 8.33e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene057476.t1 AT3G02100 33.948 271 166 5 1 259 9 278 2.51e-45 160
MS.gene057476.t1 AT3G02100 49.367 79 36 2 261 335 382 460 5.82e-18 84.7
MS.gene057476.t1 AT1G22360 24.911 281 181 9 5 259 10 286 2.44e-19 89.0
MS.gene057476.t1 AT1G22360 24.911 281 181 9 5 259 10 286 3.22e-19 88.6
MS.gene057476.t1 AT1G22380 26.241 282 176 11 4 258 12 288 4.46e-19 88.2
MS.gene057476.t1 AT1G22370 25.271 277 182 9 4 259 12 284 1.01e-18 87.0
MS.gene057476.t1 AT1G22400 23.759 282 186 8 4 259 12 290 8.86e-18 84.3
MS.gene057476.t1 AT1G78270 28.571 161 109 3 4 161 12 169 1.05e-15 78.2
MS.gene057476.t1 AT1G22340 23.759 282 185 11 4 259 12 289 1.14e-15 78.2
MS.gene057476.t1 AT3G22250 21.254 287 175 10 4 258 7 274 1.06e-14 75.1
MS.gene057476.t1 AT4G15550 27.273 253 160 11 4 240 12 256 1.21e-14 75.1
MS.gene057476.t1 AT2G36970 21.818 275 190 6 4 259 9 277 6.04e-13 69.7
MS.gene057476.t1 AT1G05675 25.446 224 146 7 5 223 6 213 3.92e-12 67.4
MS.gene057476.t1 AT1G05560 27.626 257 146 12 1 243 51 281 8.77e-12 66.2
MS.gene057476.t1 AT1G05560 27.626 257 146 12 1 243 1 231 1.15e-11 65.9
MS.gene057476.t1 AT3G46690 25.177 282 186 10 5 278 9 273 1.64e-11 65.5
MS.gene057476.t1 AT1G05680 29.197 137 83 4 5 139 6 130 2.37e-11 65.1
MS.gene057476.t1 AT2G23210 24.542 273 165 11 5 259 10 259 2.53e-11 63.9
MS.gene057476.t1 AT2G43840 23.967 242 152 8 5 238 7 224 4.31e-11 64.3
MS.gene057476.t1 AT2G43840 23.967 242 152 8 5 238 7 224 6.90e-11 63.5

Find 63 sgRNAs with CRISPR-Local

Find 266 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGACCAATTGGTAGAAATTT+TGG 0.147440 7.2:-84110098 None:intergenic
TCTACCAATTGGTCCATTAA+TGG 0.218875 7.2:+84110106 MS.gene057476:CDS
ATGAAGACAACTTCAATTAT+TGG 0.223609 7.2:+84106656 MS.gene057476:CDS
GCTCATCAGTTGGGAATTAA+AGG 0.259785 7.2:+84106902 MS.gene057476:CDS
GCAATACCATTCCCAATTCT+AGG 0.261318 7.2:+84106542 MS.gene057476:CDS
GAGATGCAAAGTATGAATTT+AGG 0.284928 7.2:+84110017 MS.gene057476:CDS
TTTATCTCTTCTATGAGTTT+AGG 0.305049 7.2:-84106812 None:intergenic
ATTGCTGCTGCTTCCATCAT+AGG 0.345591 7.2:-84109945 None:intergenic
TTCTTCAAATTTGCCTATGA+TGG 0.352015 7.2:+84109932 MS.gene057476:CDS
AGTTGAATTGCTTGTTTCCT+TGG 0.360996 7.2:-84109909 None:intergenic
TCTTGAGGACTCACACCATC+TGG 0.380472 7.2:-84106728 None:intergenic
TCACCAAAATTTCTACCAAT+TGG 0.381362 7.2:+84110095 MS.gene057476:CDS
ATTTAAACAAGTTTATCAAT+TGG 0.381381 7.2:+84110714 MS.gene057476:CDS
TTTAAACAAGTTTATCAATT+GGG 0.389077 7.2:+84110715 MS.gene057476:CDS
GGATTCATATGTCCTAGAAT+TGG 0.394232 7.2:-84106554 None:intergenic
GTGGCTTTGTAACACTAGTA+TGG 0.398180 7.2:+84110046 MS.gene057476:CDS
GCCAGCCTCAGCAACTTCAT+TGG 0.406064 7.2:+84106937 MS.gene057476:CDS
TGATGTGTGGAAGGTTGGAT+TGG 0.407953 7.2:+84110547 MS.gene057476:CDS
ACCAATGAAGTTGCTGAGGC+TGG 0.449225 7.2:-84106938 None:intergenic
GATTCATATGTCCTAGAATT+GGG 0.450823 7.2:-84106553 None:intergenic
ATTTGTGATGTGTGGAAGGT+TGG 0.452190 7.2:+84110542 MS.gene057476:CDS
GATGTGTGGAAGGTTGGATT+GGG 0.458420 7.2:+84110548 MS.gene057476:CDS
TCTTGTGGACAAAATAACTT+TGG 0.459475 7.2:-84106768 None:intergenic
TTGGAAGTTGCTCATCAGTT+GGG 0.463102 7.2:+84106893 MS.gene057476:CDS
AAACGTGAGAAAATTGCATA+AGG 0.468129 7.2:-84106577 None:intergenic
AACGTGAGAAAATTGCATAA+GGG 0.485159 7.2:-84106576 None:intergenic
CTTGGAAGTTGCTCATCAGT+TGG 0.487035 7.2:+84106892 MS.gene057476:CDS
GAAAATGGATTAATAACAAA+GGG 0.490352 7.2:+84110584 MS.gene057476:CDS
GCATCTCTTTCATCATATGA+AGG 0.493422 7.2:-84110001 None:intergenic
AAGATGAAACATGCATAGAA+TGG 0.513759 7.2:+84110165 MS.gene057476:CDS
TCAATTATTGGTCATGAGCA+AGG 0.521225 7.2:+84106668 MS.gene057476:CDS
AAAGGGAGAGATAAAGAAGA+AGG 0.528900 7.2:+84110601 MS.gene057476:CDS
CATCATATGAAGGAAGAAGA+AGG 0.529513 7.2:-84109991 None:intergenic
ATAACAGCATGGGATCTTTG+TGG 0.539319 7.2:+84110138 MS.gene057476:CDS
GCAATGCCATGGTATAACTT+AGG 0.539721 7.2:+84109963 MS.gene057476:CDS
GGGAGAGATAAAGAAGAAGG+TGG 0.542275 7.2:+84110604 MS.gene057476:CDS
TGAGCTCATAGTGGTTCTTG+TGG 0.542914 7.2:-84106783 None:intergenic
TGAAAATGGATTAATAACAA+AGG 0.544291 7.2:+84110583 MS.gene057476:CDS
CAAGTTTATCAATTGGGCAA+AGG 0.545698 7.2:+84110721 MS.gene057476:CDS
ATCTTTGAAATTAATGACAA+TGG 0.553092 7.2:+84110661 MS.gene057476:CDS
ATGGTATTGCAAGAAAATGT+GGG 0.557257 7.2:-84106529 None:intergenic
ACGTGAGAAAATTGCATAAG+GGG 0.558221 7.2:-84106575 None:intergenic
CTTGAGGACTCACACCATCT+GGG 0.568847 7.2:-84106727 None:intergenic
AAAGTATGAATTTAGGAGAG+TGG 0.571212 7.2:+84110024 MS.gene057476:CDS
GAAAATGAGCATAACAGCAT+GGG 0.573091 7.2:+84110128 MS.gene057476:CDS
TAACACTAGTATGGATCTTG+AGG 0.575545 7.2:+84110055 MS.gene057476:CDS
GGAAAATGAGCATAACAGCA+TGG 0.579479 7.2:+84110127 MS.gene057476:CDS
CAACTGATGAGCAACTTCCA+AGG 0.586354 7.2:-84106891 None:intergenic
AATGGTATTGCAAGAAAATG+TGG 0.593304 7.2:-84106530 None:intergenic
TTTGAAATTAATGACAATGG+TGG 0.597188 7.2:+84110664 MS.gene057476:CDS
AGGAAGCATTGAGCTCATAG+TGG 0.603824 7.2:-84106792 None:intergenic
TCAAGATGATAGAAAAGATG+TGG 0.608705 7.2:+84106745 MS.gene057476:CDS
ATATATTTGTGATGTGTGGA+AGG 0.612915 7.2:+84110538 MS.gene057476:CDS
AGAAACCAATGAAGTTGCTG+AGG 0.614828 7.2:-84106942 None:intergenic
TGGAAGCAGCAGCAATGCCA+TGG 0.624675 7.2:+84109952 MS.gene057476:CDS
ATATGTCCTAGAATTGGGAA+TGG 0.624908 7.2:-84106548 None:intergenic
AGACATATATTTGTGATGTG+TGG 0.627498 7.2:+84110534 MS.gene057476:CDS
AATTTAGTATCTCTCCCAGA+TGG 0.632937 7.2:+84106713 MS.gene057476:CDS
GTATGAATTTAGGAGAGTGG+TGG 0.634855 7.2:+84110027 MS.gene057476:CDS
GTGGCGAAGAACAAAGCAGA+AGG 0.644524 7.2:+84110683 MS.gene057476:CDS
TCATGAGCAAGGAAAAGTCA+AGG 0.658497 7.2:+84106679 MS.gene057476:CDS
GGAATTATAGATCCTCAAAG+TGG 0.659691 7.2:+84106995 MS.gene057476:CDS
GCATTACCTAAGTTATACCA+TGG 0.676643 7.2:-84109969 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATATAATAATACTAACA+TGG + chr7.2:84107853-84107872 MS.gene057476:intron 10.0%
!!! TATAATTATTTTGATACTTT+TGG - chr7.2:84108533-84108552 None:intergenic 10.0%
!!! TATTAATTTATGATTTTCTT+GGG + chr7.2:84109499-84109518 MS.gene057476:intron 10.0%
!!! TCTTTTTTCAAAAAAAATTT+TGG + chr7.2:84108270-84108289 MS.gene057476:intron 10.0%
!!! TTATTAATTTATGATTTTCT+TGG + chr7.2:84109498-84109517 MS.gene057476:intron 10.0%
!!! TTTTTAGATTAAAAAAACAT+GGG - chr7.2:84108333-84108352 None:intergenic 10.0%
!!! TTTTTTAGATTAAAAAAACA+TGG - chr7.2:84108334-84108353 None:intergenic 10.0%
!! AATTACAACAATTATGAAAA+CGG + chr7.2:84108442-84108461 MS.gene057476:intron 15.0%
!! ATAATTGTCACAAAAAATAT+GGG + chr7.2:84106863-84106882 MS.gene057476:CDS 15.0%
!! ATTTAAACAAGTTTATCAAT+TGG + chr7.2:84110714-84110733 MS.gene057476:CDS 15.0%
!! CAACTTCAATAAAAAATAAT+AGG + chr7.2:84108199-84108218 MS.gene057476:intron 15.0%
!! TATAATTGTCACAAAAAATA+TGG + chr7.2:84106862-84106881 MS.gene057476:CDS 15.0%
!! TCTAAATTAATAAATTTCTC+CGG - chr7.2:84109213-84109232 None:intergenic 15.0%
!! TTAAACATGTACTAATATTT+AGG - chr7.2:84107633-84107652 None:intergenic 15.0%
!! TTTAAACAAGTTTATCAATT+GGG + chr7.2:84110715-84110734 MS.gene057476:CDS 15.0%
!!! AAACTCTTTAATTTAATACT+CGG - chr7.2:84109650-84109669 None:intergenic 15.0%
!!! AAAGTTTGATTTTAAAAAAG+AGG + chr7.2:84108474-84108493 MS.gene057476:intron 15.0%
!!! AAGTTTGATTTTAAAAAAGA+GGG + chr7.2:84108475-84108494 MS.gene057476:intron 15.0%
!!! AGTTTTTCAATTTTTTACAT+TGG + chr7.2:84109574-84109593 MS.gene057476:intron 15.0%
!!! TCTAAAATAATAAATTTGTC+AGG - chr7.2:84109612-84109631 None:intergenic 15.0%
!!! TTATACTTAATAAAGCATTA+GGG + chr7.2:84107727-84107746 MS.gene057476:intron 15.0%
!!! TTTTACATTTGTTACAATTA+TGG + chr7.2:84108301-84108320 MS.gene057476:intron 15.0%
!!! TTTTTTTACTCAATTACTAT+TGG + chr7.2:84107024-84107043 MS.gene057476:intron 15.0%
!!! TTTTTTTTATCATAACACTA+AGG - chr7.2:84108012-84108031 None:intergenic 15.0%
!! AACATAATAAAGTGATATCA+TGG + chr7.2:84107379-84107398 MS.gene057476:intron 20.0%
!! ATGATAGGATACTTAAAATA+AGG + chr7.2:84108978-84108997 MS.gene057476:intron 20.0%
!! CTCTATAAATTAATAATGTC+AGG + chr7.2:84109186-84109205 MS.gene057476:intron 20.0%
!! CTTTGCATAAAATAAGTTTA+GGG + chr7.2:84108176-84108195 MS.gene057476:intron 20.0%
!! GAAACATAAATAACAGATTT+AGG - chr7.2:84110206-84110225 None:intergenic 20.0%
!! GAGTAATATATAACAAATGT+GGG + chr7.2:84108051-84108070 MS.gene057476:intron 20.0%
!! TATTCACAAATATCTCTATA+TGG - chr7.2:84107315-84107334 None:intergenic 20.0%
!! TCAAAAGAATCTTATATTCA+AGG + chr7.2:84107958-84107977 MS.gene057476:intron 20.0%
!! TGAGTAATATATAACAAATG+TGG + chr7.2:84108050-84108069 MS.gene057476:intron 20.0%
!! TGTAACAAATGTAAAAATAG+AGG - chr7.2:84108297-84108316 None:intergenic 20.0%
!! TTAATACTGAAAGTAAACTA+TGG - chr7.2:84107224-84107243 None:intergenic 20.0%
!!! AAAAAAGTGTCAATAAATGA+AGG + chr7.2:84108599-84108618 MS.gene057476:intron 20.0%
!!! AAAGTGACTATTTAATTTCT+AGG + chr7.2:84108395-84108414 MS.gene057476:intron 20.0%
!!! AAGTGACTATTTAATTTCTA+GGG + chr7.2:84108396-84108415 MS.gene057476:intron 20.0%
!!! AGAAATTAAATAGTCACTTT+TGG - chr7.2:84108395-84108414 None:intergenic 20.0%
!!! AGTATTTTTCTTTTATTGAG+AGG + chr7.2:84107750-84107769 MS.gene057476:intron 20.0%
!!! ATCTTTGAAATTAATGACAA+TGG + chr7.2:84110661-84110680 MS.gene057476:CDS 20.0%
!!! CTTATACTTAATAAAGCATT+AGG + chr7.2:84107726-84107745 MS.gene057476:intron 20.0%
!!! GAAAATGGATTAATAACAAA+GGG + chr7.2:84110584-84110603 MS.gene057476:CDS 20.0%
!!! TAATAGGATTAACTGTATTT+TGG + chr7.2:84108215-84108234 MS.gene057476:intron 20.0%
!!! TAGGACTAATTTTTTTTTGT+TGG - chr7.2:84107614-84107633 None:intergenic 20.0%
!!! TCTGTTATTTATGTTTCATT+TGG + chr7.2:84110209-84110228 MS.gene057476:intron 20.0%
!!! TGAAAATGGATTAATAACAA+AGG + chr7.2:84110583-84110602 MS.gene057476:CDS 20.0%
! AAAAAATTCTTACCACTTTG+AGG - chr7.2:84107010-84107029 None:intergenic 25.0%
! AAACATATTAGTAGTGTTCT+AGG + chr7.2:84107877-84107896 MS.gene057476:intron 25.0%
! AAGAATCTTATATTCAAGGA+AGG + chr7.2:84107962-84107981 MS.gene057476:intron 25.0%
! AATCAAAAAGGATCTAATGT+AGG + chr7.2:84109059-84109078 MS.gene057476:intron 25.0%
! ACATAAATAACAGATTTAGG+TGG - chr7.2:84110203-84110222 None:intergenic 25.0%
! ACTAATGGTTATGAATCAAA+TGG - chr7.2:84107097-84107116 None:intergenic 25.0%
! ATCAAAAAGGATCTAATGTA+GGG + chr7.2:84109060-84109079 MS.gene057476:intron 25.0%
! ATCCTATTATATGTTTCCTA+TGG + chr7.2:84107134-84107153 MS.gene057476:intron 25.0%
! ATGAAGACAACTTCAATTAT+TGG + chr7.2:84106656-84106675 MS.gene057476:CDS 25.0%
! ATGACAAGATAATTAATGCT+TGG - chr7.2:84107195-84107214 None:intergenic 25.0%
! CAATAAATGAATTAGACCAT+AGG - chr7.2:84107153-84107172 None:intergenic 25.0%
! CTAATGGTTATGAATCAAAT+GGG - chr7.2:84107096-84107115 None:intergenic 25.0%
! CTATGGTCTAATTCATTTAT+TGG + chr7.2:84107151-84107170 MS.gene057476:intron 25.0%
! GCAAAACAATGATTGATATT+TGG + chr7.2:84108661-84108680 MS.gene057476:intron 25.0%
! GCTTTGCATAAAATAAGTTT+AGG + chr7.2:84108175-84108194 MS.gene057476:intron 25.0%
! GTATAATAAGTAGTGTGTAT+TGG + chr7.2:84108572-84108591 MS.gene057476:intron 25.0%
! TAAATTAATAATGTCAGGAC+CGG + chr7.2:84109191-84109210 MS.gene057476:intron 25.0%
! TAATAATCACTATAGCTCAA+TGG + chr7.2:84108083-84108102 MS.gene057476:intron 25.0%
! TAATGAAACATGCTATTGAA+GGG - chr7.2:84110424-84110443 None:intergenic 25.0%
! TAATGGTTATGAATCAAATG+GGG - chr7.2:84107095-84107114 None:intergenic 25.0%
! TTTATCTCTTCTATGAGTTT+AGG - chr7.2:84106815-84106834 None:intergenic 25.0%
!! ATATCATGGTATGATTTTGT+TGG + chr7.2:84107393-84107412 MS.gene057476:intron 25.0%
!! GGAAGATCTCTTATAATTTT+CGG - chr7.2:84109526-84109545 None:intergenic 25.0%
!! GTTGTTTATGAACTGAATTT+TGG + chr7.2:84109872-84109891 MS.gene057476:intron 25.0%
!! TTATGCTCATTTTCCATTAA+TGG - chr7.2:84110122-84110141 None:intergenic 25.0%
!! TTATTTCCTTATTTAGTGCT+TGG + chr7.2:84109680-84109699 MS.gene057476:intron 25.0%
!! TTTGAAATTAATGACAATGG+TGG + chr7.2:84110664-84110683 MS.gene057476:CDS 25.0%
!!! AACTGAATTTTGGAATTTTC+AGG + chr7.2:84109882-84109901 MS.gene057476:intron 25.0%
!!! AATTCAAAGAATTAGCTCTA+GGG + chr7.2:84110258-84110277 MS.gene057476:intron 25.0%
!!! AATTTCTAGGGCAAAAAATA+TGG + chr7.2:84108408-84108427 MS.gene057476:intron 25.0%
!!! AGACCAAAATACATCTTTTT+TGG + chr7.2:84108367-84108386 MS.gene057476:intron 25.0%
!!! ATTGGTTTCTTTTAACTCTA+TGG + chr7.2:84106955-84106974 MS.gene057476:CDS 25.0%
!!! CAAGTTTTAGCTTCTTATTT+TGG - chr7.2:84109829-84109848 None:intergenic 25.0%
!!! CATTAGATCCTTTTTGATTA+AGG - chr7.2:84109058-84109077 None:intergenic 25.0%
!!! CTAATTTTTTTTTGTTGGCT+CGG - chr7.2:84107609-84107628 None:intergenic 25.0%
!!! GATTTAATTTGTATGCACTA+TGG + chr7.2:84107250-84107269 MS.gene057476:intron 25.0%
!!! GCTTGTACTTTTTTTGTTAA+AGG - chr7.2:84107057-84107076 None:intergenic 25.0%
!!! TAAAATAAGGAGTACTTATG+TGG + chr7.2:84108991-84109010 MS.gene057476:intron 25.0%
!!! TAATTTTTTTTTGTTGGCTC+GGG - chr7.2:84107608-84107627 None:intergenic 25.0%
!!! TGTACTTTTTTTGTTAAAGG+TGG - chr7.2:84107054-84107073 None:intergenic 25.0%
!!! TTCTTCATTGATTCATTATG+AGG - chr7.2:84109149-84109168 None:intergenic 25.0%
AAAAATGGCAAACACAACAA+AGG - chr7.2:84110494-84110513 None:intergenic 30.0%
AAACGTGAGAAAATTGCATA+AGG - chr7.2:84106580-84106599 None:intergenic 30.0%
AAAGTATGAATTTAGGAGAG+TGG + chr7.2:84110024-84110043 MS.gene057476:CDS 30.0%
AAATCAAGAAACGTGTTAGA+CGG + chr7.2:84107426-84107445 MS.gene057476:intron 30.0%
AACGTGAGAAAATTGCATAA+GGG - chr7.2:84106579-84106598 None:intergenic 30.0%
AAGATGAAACATGCATAGAA+TGG + chr7.2:84110165-84110184 MS.gene057476:CDS 30.0%
AAGCTAAAACTTGTACCATT+TGG + chr7.2:84109836-84109855 MS.gene057476:intron 30.0%
AATCTTATATTCAAGGAAGG+AGG + chr7.2:84107965-84107984 MS.gene057476:intron 30.0%
AATGGTATTGCAAGAAAATG+TGG - chr7.2:84106533-84106552 None:intergenic 30.0%
ACGATTTAAGTCTTTGGATT+AGG + chr7.2:84108740-84108759 MS.gene057476:intron 30.0%
ACTGTACATACCAAACAAAA+AGG + chr7.2:84109293-84109312 MS.gene057476:intron 30.0%
AGACATATATTTGTGATGTG+TGG + chr7.2:84110534-84110553 MS.gene057476:CDS 30.0%
AGAGTAACGATTTAAGTCTT+TGG + chr7.2:84108734-84108753 MS.gene057476:intron 30.0%
AGTACAAGCAATTCTTAACA+TGG + chr7.2:84107068-84107087 MS.gene057476:intron 30.0%
AGTGAATTCAAAGGAAATCA+AGG + chr7.2:84110356-84110375 MS.gene057476:intron 30.0%
ATATATTTGTGATGTGTGGA+AGG + chr7.2:84110538-84110557 MS.gene057476:CDS 30.0%
ATATCACCAAGCACTAAATA+AGG - chr7.2:84109689-84109708 None:intergenic 30.0%
ATCAAGGTAAAATTGTAGGT+TGG + chr7.2:84110372-84110391 MS.gene057476:intron 30.0%
ATGGTATTGCAAGAAAATGT+GGG - chr7.2:84106532-84106551 None:intergenic 30.0%
CGTATTCACCTTAATCAAAA+AGG + chr7.2:84109047-84109066 MS.gene057476:intron 30.0%
CTAGAGCTAATTCTTTGAAT+TGG - chr7.2:84110259-84110278 None:intergenic 30.0%
GACCATAGGAAACATATAAT+AGG - chr7.2:84107139-84107158 None:intergenic 30.0%
GAGATGCAAAGTATGAATTT+AGG + chr7.2:84110017-84110036 MS.gene057476:CDS 30.0%
GATGCAGAATAAACAACTAA+TGG - chr7.2:84107112-84107131 None:intergenic 30.0%
GATTCATATGTCCTAGAATT+GGG - chr7.2:84106556-84106575 None:intergenic 30.0%
GATTTCCTTTGAATTCACTT+GGG - chr7.2:84110355-84110374 None:intergenic 30.0%
GCTAATTCTTTGAATTGGTT+TGG - chr7.2:84110254-84110273 None:intergenic 30.0%
GGAAATCAAGGTAAAATTGT+AGG + chr7.2:84110368-84110387 MS.gene057476:intron 30.0%
GGAGTATAATTGAGTATGTT+AGG + chr7.2:84109081-84109100 MS.gene057476:intron 30.0%
GGATTCGAAAAAGATGAAAA+TGG + chr7.2:84110569-84110588 MS.gene057476:CDS 30.0%
GGTCTCTTCTAATTTAACTA+AGG + chr7.2:84107501-84107520 MS.gene057476:intron 30.0%
GTAATGAAACATGCTATTGA+AGG - chr7.2:84110425-84110444 None:intergenic 30.0%
GTACAGTAAATGTAAACAAG+AGG + chr7.2:84109424-84109443 MS.gene057476:intron 30.0%
GTATCTCAACTTTGCAAAAT+AGG + chr7.2:84109802-84109821 MS.gene057476:intron 30.0%
TAAGAACACCAACTCTAATT+GGG + chr7.2:84108791-84108810 MS.gene057476:intron 30.0%
TAATGCTTGGTTCATTATTG+AGG - chr7.2:84107182-84107201 None:intergenic 30.0%
TCAAGATGATAGAAAAGATG+TGG + chr7.2:84106745-84106764 MS.gene057476:CDS 30.0%
TCACCAAAATTTCTACCAAT+TGG + chr7.2:84110095-84110114 MS.gene057476:CDS 30.0%
TCTTGTGGACAAAATAACTT+TGG - chr7.2:84106771-84106790 None:intergenic 30.0%
TGATTTCCTTTGAATTCACT+TGG - chr7.2:84110356-84110375 None:intergenic 30.0%
TGTCACAAAAAATATGGGTT+GGG + chr7.2:84106868-84106887 MS.gene057476:CDS 30.0%
TTCTTCAAATTTGCCTATGA+TGG + chr7.2:84109932-84109951 MS.gene057476:CDS 30.0%
TTGTCACAAAAAATATGGGT+TGG + chr7.2:84106867-84106886 MS.gene057476:CDS 30.0%
! AATTTGAGTTCTAGTGTGAT+AGG - chr7.2:84109718-84109737 None:intergenic 30.0%
! ACATCTTTTCTATCATCTTG+AGG - chr7.2:84106746-84106765 None:intergenic 30.0%
! ACTATAGAAAGTGTGTGTAA+TGG + chr7.2:84110464-84110483 MS.gene057476:intron 30.0%
! CAATTCAAAGAATTAGCTCT+AGG + chr7.2:84110257-84110276 MS.gene057476:intron 30.0%
! CTATAGAAAGTGTGTGTAAT+GGG + chr7.2:84110465-84110484 MS.gene057476:intron 30.0%
! GCACCAAAAAAGATGTATTT+TGG - chr7.2:84108373-84108392 None:intergenic 30.0%
! TATAGAAAGTGTGTGTAATG+GGG + chr7.2:84110466-84110485 MS.gene057476:intron 30.0%
! TATGCAATTTTCTCACGTTT+TGG + chr7.2:84106580-84106599 MS.gene057476:CDS 30.0%
! TCTGTAAGGGTTTCTAAAAA+TGG - chr7.2:84108851-84108870 None:intergenic 30.0%
! TTGCATACGTTGATTATGAT+AGG + chr7.2:84108963-84108982 MS.gene057476:intron 30.0%
! TTTTGCAAAGTTGAGATACA+AGG - chr7.2:84109801-84109820 None:intergenic 30.0%
!! ATCATTGTTTTGCCTCTTAT+AGG - chr7.2:84108654-84108673 None:intergenic 30.0%
!! GACTAATTTGCCTTTTTGTT+TGG - chr7.2:84109306-84109325 None:intergenic 30.0%
!! TTTTAGAAACCCTTACAGAT+GGG + chr7.2:84108852-84108871 MS.gene057476:intron 30.0%
!! TTTTCCATTAATGGACCAAT+TGG - chr7.2:84110113-84110132 None:intergenic 30.0%
!! TTTTTAGAAACCCTTACAGA+TGG + chr7.2:84108851-84108870 MS.gene057476:intron 30.0%
AAAGGGAGAGATAAAGAAGA+AGG + chr7.2:84110601-84110620 MS.gene057476:CDS 35.0%
AATCAAGAAACGTGTTAGAC+GGG + chr7.2:84107427-84107446 MS.gene057476:intron 35.0%
AATTTAGTATCTCTCCCAGA+TGG + chr7.2:84106713-84106732 MS.gene057476:CDS 35.0%
ACGTGAGAAAATTGCATAAG+GGG - chr7.2:84106578-84106597 None:intergenic 35.0%
ACTACTGTGTTCATATGCAT+TGG + chr7.2:84109380-84109399 MS.gene057476:intron 35.0%
AGGTCATACAACACTTGTAT+AGG - chr7.2:84109129-84109148 None:intergenic 35.0%
AGTGTCAATAAATGAAGGAG+CGG + chr7.2:84108604-84108623 MS.gene057476:intron 35.0%
AGTTGAATTGCTTGTTTCCT+TGG - chr7.2:84109912-84109931 None:intergenic 35.0%
ATATGTCCTAGAATTGGGAA+TGG - chr7.2:84106551-84106570 None:intergenic 35.0%
ATCCAATTAGAGACTAATGG+TGG - chr7.2:84108894-84108913 None:intergenic 35.0%
ATTCTCACGAGCATTATAAC+AGG - chr7.2:84108245-84108264 None:intergenic 35.0%
ATTGAGAACCCAATTAGAGT+TGG - chr7.2:84108802-84108821 None:intergenic 35.0%
CAAAGCAGCAAAGCAAAAAT+GGG - chr7.2:84108161-84108180 None:intergenic 35.0%
CAAGTTTATCAATTGGGCAA+AGG + chr7.2:84110721-84110740 MS.gene057476:CDS 35.0%
CATCATATGAAGGAAGAAGA+AGG - chr7.2:84109994-84110013 None:intergenic 35.0%
CTAATTTACGTTGAGTCTCA+AGG - chr7.2:84109358-84109377 None:intergenic 35.0%
GAAAATGAGCATAACAGCAT+GGG + chr7.2:84110128-84110147 MS.gene057476:CDS 35.0%
GCATCTCTTTCATCATATGA+AGG - chr7.2:84110004-84110023 None:intergenic 35.0%
GCATGTTTCATTACACATTG+TGG + chr7.2:84110431-84110450 MS.gene057476:intron 35.0%
GCATTACCTAAGTTATACCA+TGG - chr7.2:84109972-84109991 None:intergenic 35.0%
GGAATTATAGATCCTCAAAG+TGG + chr7.2:84106995-84107014 MS.gene057476:CDS 35.0%
GGATTCATATGTCCTAGAAT+TGG - chr7.2:84106557-84106576 None:intergenic 35.0%
GTAAGAACACCAACTCTAAT+TGG + chr7.2:84108790-84108809 MS.gene057476:intron 35.0%
GTTTCATTACACATTGTGGT+TGG + chr7.2:84110435-84110454 MS.gene057476:intron 35.0%
TAACACTAGTATGGATCTTG+AGG + chr7.2:84110055-84110074 MS.gene057476:CDS 35.0%
TCAATTATTGGTCATGAGCA+AGG + chr7.2:84106668-84106687 MS.gene057476:CDS 35.0%
TCTACCAATTGGTCCATTAA+TGG + chr7.2:84110106-84110125 MS.gene057476:CDS 35.0%
TGCATCCAATTAGAGACTAA+TGG - chr7.2:84108897-84108916 None:intergenic 35.0%
TGGGTTGTACGTAAAGATAA+GGG + chr7.2:84110308-84110327 MS.gene057476:intron 35.0%
TTACGTACAACCCAAAGAAA+AGG - chr7.2:84110302-84110321 None:intergenic 35.0%
TTCTCACGAGCATTATAACA+GGG - chr7.2:84108244-84108263 None:intergenic 35.0%
! AGTGATTTTGCATCCATGTT+TGG - chr7.2:84106606-84106625 None:intergenic 35.0%
! CCTTAAAAGGCCTTTTCTTT+GGG + chr7.2:84110289-84110308 MS.gene057476:intron 35.0%
! GAATTAAAGGAGCTCTTTTC+TGG + chr7.2:84106915-84106934 MS.gene057476:CDS 35.0%
! GGACCAATTGGTAGAAATTT+TGG - chr7.2:84110101-84110120 None:intergenic 35.0%
! GTATGATTTTGTTGGATGCA+TGG + chr7.2:84107401-84107420 MS.gene057476:intron 35.0%
! TCATCTCATCTAAGCGTTTT+TGG - chr7.2:84107477-84107496 None:intergenic 35.0%
! TCCTTAAAAGGCCTTTTCTT+TGG + chr7.2:84110288-84110307 MS.gene057476:intron 35.0%
! TGGCTCAAAATCTTCTTTTG+TGG - chr7.2:84110401-84110420 None:intergenic 35.0%
! TTGGGTTGTACGTAAAGATA+AGG + chr7.2:84110307-84110326 MS.gene057476:intron 35.0%
! TTTTGCCTCTTATAGGATGA+GGG - chr7.2:84108647-84108666 None:intergenic 35.0%
!!! TTTTTTACATTGGCCCAAGT+CGG + chr7.2:84109584-84109603 MS.gene057476:intron 35.0%
ACTGTTCGATCTTGACCAAA+TGG - chr7.2:84109854-84109873 None:intergenic 40.0%
AGAAACCAATGAAGTTGCTG+AGG - chr7.2:84106945-84106964 None:intergenic 40.0%
ATAACAGCATGGGATCTTTG+TGG + chr7.2:84110138-84110157 MS.gene057476:CDS 40.0%
ATCAAGAAACGTGTTAGACG+GGG + chr7.2:84107428-84107447 MS.gene057476:intron 40.0%
ATTTGTGATGTGTGGAAGGT+TGG + chr7.2:84110542-84110561 MS.gene057476:CDS 40.0%
CAGCAGCGTTAAAACTCTTA+GGG + chr7.2:84107551-84107570 MS.gene057476:intron 40.0%
CTGTAATAGCGATAACCACA+CGG + chr7.2:84109740-84109759 MS.gene057476:intron 40.0%
GCAAAGCAGCAAAGCAAAAA+TGG - chr7.2:84108162-84108181 None:intergenic 40.0%
GCAATACCATTCCCAATTCT+AGG + chr7.2:84106542-84106561 MS.gene057476:CDS 40.0%
GCAATGCCATGGTATAACTT+AGG + chr7.2:84109963-84109982 MS.gene057476:CDS 40.0%
GCATACCCAAGTGAATTCAA+AGG + chr7.2:84110347-84110366 MS.gene057476:intron 40.0%
GCTCATCAGTTGGGAATTAA+AGG + chr7.2:84106902-84106921 MS.gene057476:CDS 40.0%
GGAAAATGAGCATAACAGCA+TGG + chr7.2:84110127-84110146 MS.gene057476:CDS 40.0%
GTATGAATTTAGGAGAGTGG+TGG + chr7.2:84110027-84110046 MS.gene057476:CDS 40.0%
GTGTGGTTATCGCTATTACA+GGG - chr7.2:84109741-84109760 None:intergenic 40.0%
TAGGGCTTGATCTCCTTAAA+AGG + chr7.2:84110276-84110295 MS.gene057476:intron 40.0%
TCATGAGCAAGGAAAAGTCA+AGG + chr7.2:84106679-84106698 MS.gene057476:CDS 40.0%
TGAAACATGCTATTGAAGGG+TGG - chr7.2:84110421-84110440 None:intergenic 40.0%
TTGGAAGTTGCTCATCAGTT+GGG + chr7.2:84106893-84106912 MS.gene057476:CDS 40.0%
TTTGCCTCTTATAGGATGAG+GGG - chr7.2:84108646-84108665 None:intergenic 40.0%
! ATTTAGAATGTGTGACCGTG+TGG - chr7.2:84109758-84109777 None:intergenic 40.0%
! CCCAAAGAAAAGGCCTTTTA+AGG - chr7.2:84110292-84110311 None:intergenic 40.0%
! GTTTTGCCTCTTATAGGATG+AGG - chr7.2:84108648-84108667 None:intergenic 40.0%
! TGCCACCATTAGTCTCTAAT+TGG + chr7.2:84108889-84108908 MS.gene057476:intron 40.0%
! TTTTTACATTGGCCCAAGTC+GGG + chr7.2:84109585-84109604 MS.gene057476:intron 40.0%
!! AAAAAATATGGGTTGGGCCT+TGG + chr7.2:84106874-84106893 MS.gene057476:CDS 40.0%
!! ACTCTACTAGAGAGTACCAA+AGG - chr7.2:84108719-84108738 None:intergenic 40.0%
!! CTCTACTAGAGAGTACCAAA+GGG - chr7.2:84108718-84108737 None:intergenic 40.0%
!! GTGGCTTTGTAACACTAGTA+TGG + chr7.2:84110046-84110065 MS.gene057476:CDS 40.0%
!!! ATGGAGAGTTTTGTTGAGGA+AGG + chr7.2:84106974-84106993 MS.gene057476:CDS 40.0%
!!! CTCTATGGAGAGTTTTGTTG+AGG + chr7.2:84106970-84106989 MS.gene057476:CDS 40.0%
!!! TGGAATTTTCAGGTCTTCCA+AGG + chr7.2:84109892-84109911 MS.gene057476:intron 40.0%
AAATTTGTCAGGTCCCGACT+TGG - chr7.2:84109601-84109620 None:intergenic 45.0%
AATTTGTCAGGTCCCGACTT+GGG - chr7.2:84109600-84109619 None:intergenic 45.0%
ACGCTTAGATGAGATGACGA+TGG + chr7.2:84107480-84107499 MS.gene057476:intron 45.0%
AGAAGAGCAGGTTCAAGTGA+TGG + chr7.2:84107905-84107924 MS.gene057476:intron 45.0%
AGACTAATGGTGGCAAGCAT+GGG - chr7.2:84108884-84108903 None:intergenic 45.0%
AGCAGCAAAGCAAAAATGGG+AGG - chr7.2:84108158-84108177 None:intergenic 45.0%
CAACTGATGAGCAACTTCCA+AGG - chr7.2:84106894-84106913 None:intergenic 45.0%
CACTTGAACCTGCTCTTCTA+GGG - chr7.2:84107904-84107923 None:intergenic 45.0%
CGCTGCAACGTAATTCTAAG+AGG - chr7.2:84109333-84109352 None:intergenic 45.0%
CGTGTGGTTATCGCTATTAC+AGG - chr7.2:84109742-84109761 None:intergenic 45.0%
CTTGGAAGTTGCTCATCAGT+TGG + chr7.2:84106892-84106911 MS.gene057476:CDS 45.0%
GATGTGTGGAAGGTTGGATT+GGG + chr7.2:84110548-84110567 MS.gene057476:CDS 45.0%
GCAGCAGCGTTAAAACTCTT+AGG + chr7.2:84107550-84107569 MS.gene057476:intron 45.0%
GGGAGAGATAAAGAAGAAGG+TGG + chr7.2:84110604-84110623 MS.gene057476:CDS 45.0%
TAAATGAAGGAGCGGATGAG+AGG + chr7.2:84108612-84108631 MS.gene057476:intron 45.0%
TCACGAGCATTATAACAGGG+AGG - chr7.2:84108241-84108260 None:intergenic 45.0%
TCACTTGAACCTGCTCTTCT+AGG - chr7.2:84107905-84107924 None:intergenic 45.0%
TGAGCTCATAGTGGTTCTTG+TGG - chr7.2:84106786-84106805 None:intergenic 45.0%
TGATGTGTGGAAGGTTGGAT+TGG + chr7.2:84110547-84110566 MS.gene057476:CDS 45.0%
! ATTGCTGCTGCTTCCATCAT+AGG - chr7.2:84109948-84109967 None:intergenic 45.0%
!! AGGAAGCATTGAGCTCATAG+TGG - chr7.2:84106795-84106814 None:intergenic 45.0%
!! TCTCACGTTTTGGCCAAACA+TGG + chr7.2:84106590-84106609 MS.gene057476:CDS 45.0%
!!! ATAATAAGATAATAATTTTT+CGG - chr7.2:84109547-84109566 None:intergenic 5.0%
!!! ATTTTTCTTATATTTAATAT+CGG - chr7.2:84107673-84107692 None:intergenic 5.0%
ACCAATGAAGTTGCTGAGGC+TGG - chr7.2:84106941-84106960 None:intergenic 50.0%
AGAGCAGGTTCAAGTGATGG+AGG + chr7.2:84107908-84107927 MS.gene057476:intron 50.0%
CCTCTTATAGGATGAGGGGA+AGG - chr7.2:84108642-84108661 None:intergenic 50.0%
CCTTCCCCTCATCCTATAAG+AGG + chr7.2:84108639-84108658 MS.gene057476:intron 50.0%
CTTGAGGACTCACACCATCT+GGG - chr7.2:84106730-84106749 None:intergenic 50.0%
GAAGTCTCTTCCTCTCCCTT+TGG + chr7.2:84108700-84108719 MS.gene057476:intron 50.0%
GAGACTAATGGTGGCAAGCA+TGG - chr7.2:84108885-84108904 None:intergenic 50.0%
GGAGAGTTAGCCACCCATTT+GGG + chr7.2:84107572-84107591 MS.gene057476:intron 50.0%
GTGGCGAAGAACAAAGCAGA+AGG + chr7.2:84110683-84110702 MS.gene057476:CDS 50.0%
TCTTGAGGACTCACACCATC+TGG - chr7.2:84106731-84106750 None:intergenic 50.0%
! GGGCTCTAACCCATCTGTAA+GGG - chr7.2:84108864-84108883 None:intergenic 50.0%
! TGGGCTCTAACCCATCTGTA+AGG - chr7.2:84108865-84108884 None:intergenic 50.0%
!! CTAGAGAGTACCAAAGGGAG+AGG - chr7.2:84108713-84108732 None:intergenic 50.0%
!! TTCTAGGACCCTAGAAGAGC+AGG + chr7.2:84107893-84107912 MS.gene057476:intron 50.0%
CCACCCATTTGGGTCTCACA+AGG + chr7.2:84107582-84107601 MS.gene057476:intron 55.0%
CCTTGTGAGACCCAAATGGG+TGG - chr7.2:84107585-84107604 None:intergenic 55.0%
GCCAGCCTCAGCAACTTCAT+TGG + chr7.2:84106937-84106956 MS.gene057476:CDS 55.0%
GGGAGAGTTAGCCACCCATT+TGG + chr7.2:84107571-84107590 MS.gene057476:intron 55.0%
TGGAAGCAGCAGCAATGCCA+TGG + chr7.2:84109952-84109971 MS.gene057476:CDS 55.0%
! GGGCCTTGTGAGACCCAAAT+GGG - chr7.2:84107588-84107607 None:intergenic 55.0%
! CGGGCCTTGTGAGACCCAAA+TGG - chr7.2:84107589-84107608 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 84106521 84110748 84106521 ID=MS.gene057476
chr7.2 mRNA 84106521 84110748 84106521 ID=MS.gene057476.t1;Parent=MS.gene057476
chr7.2 exon 84106521 84107016 84106521 ID=MS.gene057476.t1.exon1;Parent=MS.gene057476.t1
chr7.2 CDS 84106521 84107016 84106521 ID=cds.MS.gene057476.t1;Parent=MS.gene057476.t1
chr7.2 exon 84109904 84110186 84109904 ID=MS.gene057476.t1.exon2;Parent=MS.gene057476.t1
chr7.2 CDS 84109904 84110186 84109904 ID=cds.MS.gene057476.t1;Parent=MS.gene057476.t1
chr7.2 exon 84110517 84110748 84110517 ID=MS.gene057476.t1.exon3;Parent=MS.gene057476.t1
chr7.2 CDS 84110517 84110748 84110517 ID=cds.MS.gene057476.t1;Parent=MS.gene057476.t1
Gene Sequence

>MS.gene057476

ATGGGAAACCCACATTTTCTTGCAATACCATTCCCAATTCTAGGACATATGAATCCCCTTATGCAATTTTCTCACGTTTTGGCCAAACATGGATGCAAAATCACTTTCTTGACTTCAGATGAAAATTACAATAAAATGAAGACAACTTCAATTATTGGTCATGAGCAAGGAAAAGTCAAGGAATCAAACATAAATTTAGTATCTCTCCCAGATGGTGTGAGTCCTCAAGATGATAGAAAAGATGTGGCCAAAGTTATTTTGTCCACAAGAACCACTATGAGCTCAATGCTTCCTAAACTCATAGAAGAGATAAATGCTCTTGATAGTGACAAGATTTCTTGTATAATTGTCACAAAAAATATGGGTTGGGCCTTGGAAGTTGCTCATCAGTTGGGAATTAAAGGAGCTCTTTTCTGGCCAGCCTCAGCAACTTCATTGGTTTCTTTTAACTCTATGGAGAGTTTTGTTGAGGAAGGAATTATAGATCCTCAAAGTGGTAAGAATTTTTTTACTCAATTACTATTGGTTCTCCACCTTTAACAAAAAAAGTACAAGCAATTCTTAACATGGACCCCATTTGATTCATAACCATTAGTTGTTTATTCTGCATCTCATCCTATTATATGTTTCCTATGGTCTAATTCATTTATTGGAGATTCCTCAATAATGAACCAAGCATTAATTATCTTGTCATATGCTTCCATAGTTTACTTTCAGTATTAAATATAAGATTTAATTTGTATGCACTATGGTTGCAATTTTCTTTTTATACATGCATCAGTCAAGTTTGTCCATATAGAGATATTTGTGAATATGTTTTGAGAACTAACATAATAAAGTCTCTTCTAAAATTAAAAAAACATAATAAAGTGATATCATGGTATGATTTTGTTGGATGCATGGACAAATCAAGAAACGTGTTAGACGGGGTTAACAAAATTTAGTTCTAAATACCAAAAACGCTTAGATGAGATGACGATGGTCTCTTCTAATTTAACTAAGGTCTTATTCGAATCAAGTCTTGTGCATGCAGCAGCGTTAAAACTCTTAGGGAGAGTTAGCCACCCATTTGGGTCTCACAAGGCCCGAGCCAACAAAAAAAAATTAGTCCTAAATATTAGTACATGTTTAAATTATGTATTTGTCGCTCCGATATTAAATATAAGAAAAATAATAATTTAAGTGAAATACATATACTTTGTTTTCTTATACTTAATAAAGCATTAGGGAGTATTTTTCTTTTATTGAGAGGAGCAATTACATATTAGTTGAAGAATATATATGAGTGATTTTACTAAAGTAAATTGTGTGATTATAAAAGAATGAGTGATTATAATATAATAATACTAACATGGTAAACATATTAGTAGTGTTCTAGGACCCTAGAAGAGCAGGTTCAAGTGATGGAGGTAGTATATATTTTAATATTAAAATTTATCAAAAGAATCTTATATTCAAGGAAGGAGGTAATACATATTTTAGTGATATCCTTAGTGTTATGATAAAAAAAATAAAAAAATTAGAACTGCTGAGTAATATATAACAAATGTGGGTTTCTTACATAATAATCACTATAGCTCAATGGCTCAGCTTTCTAATTTTTAAACTTAGAACATGAGTTTGATTTGCTAAGTCCTCCCATTTTTGCTTTGCTGCTTTGCATAAAATAAGTTTAGGGCAACTTCAATAAAAAATAATAGGATTAACTGTATTTTGGCCTCCCTGTTATAATGCTCGTGAGAATATTTATCTTTTTTCAAAAAAAATTTTGGTCCTCTATTTTTACATTTGTTACAATTATGGTTCTAACCCATGTTTTTTTAATCTAAAAAAAAAATCACTTTTGAGACCAAAATACATCTTTTTTGGTGCCAAAAGTGACTATTTAATTTCTAGGGCAAAAAATATGGATTGAGAACAAAATTACAACAATTATGAAAACGGAGAAAACAAAAAGTTTGATTTTAAAAAAGAGGGATTATTTTTGCGAGTTTAATAAAATAGAGAGACCAAAAGTATCAAAATAATTATAGTAAAATAAGTATAAAACTGTATAATAAGTAGTGTGTATTGGTTAAAAAAAAGTGTCAATAAATGAAGGAGCGGATGAGAGGAAAGCCTTCCCCTCATCCTATAAGAGGCAAAACAATGATTGATATTTGGTGTGAAAAATATTGATGAAGTCTCTTCCTCTCCCTTTGGTACTCTCTAGTAGAGTAACGATTTAAGTCTTTGGATTAGGTCTTCTTCTATCTTTCGATTTTTTTATGTAAGAACACCAACTCTAATTGGGTTCTCAATTTTCAATTATCGATCAATCAAATTCTCCATTTTTAGAAACCCTTACAGATGGGTTAGAGCCCATGCTTGCCACCATTAGTCTCTAATTGGATGCACATATAAAAGAGTTTTATATTTAAACACTTCAGTATATTTTTTATGTTGCATACGTTGATTATGATAGGATACTTAAAATAAGGAGTACTTATGTGGTGACTCAGCTATTTTTAGAAGTAAATATGATTTCGTATTCACCTTAATCAAAAAGGATCTAATGTAGGGAGTATAATTGAGTATGTTAGGATGCACTTGTCGTGTGCATTTACCTATACAAGTGTTGTATGACCTCATAATGAATCAATGAAGAATTTGAGTACAGTTAAAACTCTATAAATTAATAATGTCAGGACCGGAGAAATTTATTAATTTAGAGAGTTATTAATTTATCGATAAATTAATAATTATTAATTTAAAGAGTTTTTAAGTAATTATACTGTACATACCAAACAAAAAGGCAAATTAGTCTATGCCTCTTAGAATTACGTTGCAGCGAACCTTGAGACTCAACGTAAATTAGTAACTACTGTGTTCATATGCATTGGAAATCAATAATGACTTTTAAAGTACAGTAAATGTAAACAAGAGGAACAAATGTGTTCAATGTATTCTTAATATATTTTTTTTCAGTTTCTATGAATTATTAATTTATGATTTTCTTGGGACCGAAAATTATAAGAGATCTTCCGAAAAATTATTATCTTATTATTTTATCGAGTTTTTCAATTTTTTACATTGGCCCAAGTCGGGACCTGACAAATTTATTATTTTAGAGAGTTTATTAATTTACCGAGTATTAAATTAAAGAGTTTTTACTGTACTTTATTTCCTTATTTAGTGCTTGGTGATATTCAACGCCTATCACACTAGAACTCAAATTCCCTGTAATAGCGATAACCACACGGTCACACATTCTAAATTCTTTGATATTAATTGTGCTCCTTGTATCTCAACTTTGCAAAATAGGTCCAAAATAAGAAGCTAAAACTTGTACCATTTGGTCAAGATCGAACAGTTGTTTATGAACTGAATTTTGGAATTTTCAGGTCTTCCAAGGAAACAAGCAATTCAACTTTCTTCAAATTTGCCTATGATGGAAGCAGCAGCAATGCCATGGTATAACTTAGGTAATGCCTTCTTCTTCCTTCATATGATGAAAGAGATGCAAAGTATGAATTTAGGAGAGTGGTGGCTTTGTAACACTAGTATGGATCTTGAGGCTGAAGCAGTTTCTTTATCACCAAAATTTCTACCAATTGGTCCATTAATGGAAAATGAGCATAACAGCATGGGATCTTTGTGGCAAGAAGATGAAACATGCATAGAATGGTTAGATCAATATCCACCTAAATCTGTTATTTATGTTTCATTTGGTAGCTTGATATCAATTTGTCCAAACCAATTCAAAGAATTAGCTCTAGGGCTTGATCTCCTTAAAAGGCCTTTTCTTTGGGTTGTACGTAAAGATAAGGGTAATGAGACAAAATATGCATACCCAAGTGAATTCAAAGGAAATCAAGGTAAAATTGTAGGTTGGACACCACAAAAGAAGATTTTGAGCCACCCTTCAATAGCATGTTTCATTACACATTGTGGTTGGAATTCTACTATAGAAAGTGTGTGTAATGGGGTACCTTTGTTGTGTTTGCCATTTTTTAGTGATCAACTTATGAACAAGACATATATTTGTGATGTGTGGAAGGTTGGATTGGGATTCGAAAAAGATGAAAATGGATTAATAACAAAGGGAGAGATAAAGAAGAAGGTGGATGAATTGCTTGAAGATGAAGAAATTAAAGAAAGATCTTTGAAATTAATGACAATGGTGGCGAAGAACAAAGCAGAAGGAGATAAGAATTTAAACAAGTTTATCAATTGGGCAAAGGAATAG

Protein sequence

>MS.gene057476.t1

MGNPHFLAIPFPILGHMNPLMQFSHVLAKHGCKITFLTSDENYNKMKTTSIIGHEQGKVKESNINLVSLPDGVSPQDDRKDVAKVILSTRTTMSSMLPKLIEEINALDSDKISCIIVTKNMGWALEVAHQLGIKGALFWPASATSLVSFNSMESFVEEGIIDPQSGLPRKQAIQLSSNLPMMEAAAMPWYNLGNAFFFLHMMKEMQSMNLGEWWLCNTSMDLEAEAVSLSPKFLPIGPLMENEHNSMGSLWQEDETCIECDQLMNKTYICDVWKVGLGFEKDENGLITKGEIKKKVDELLEDEEIKERSLKLMTMVAKNKAEGDKNLNKFINWAKE