Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86660.t1 | XP_003622131.1 | 99.7 | 391 | 1 | 0 | 1 | 391 | 12 | 402 | 6.20E-221 | 776.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86660.t1 | Q9SGA0 | 71.7 | 392 | 104 | 4 | 1 | 391 | 13 | 398 | 4.0e-152 | 539.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86660.t1 | G7L275 | 99.7 | 391 | 1 | 0 | 1 | 391 | 12 | 402 | 4.5e-221 | 776.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050508 | MS.gene86660 | 0.805962 | 1.04E-49 | -1.69E-46 |
| MS.gene051064 | MS.gene86660 | 0.800689 | 1.28E-48 | -1.69E-46 |
| MS.gene052589 | MS.gene86660 | 0.803545 | 3.31E-49 | -1.69E-46 |
| MS.gene052590 | MS.gene86660 | 0.801025 | 1.09E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene86660 | MS.gene029645 | PPI |
| MS.gene054781 | MS.gene86660 | PPI |
| MS.gene90601 | MS.gene86660 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86660.t1 | MTR_7g028050 | 99.744 | 391 | 1 | 0 | 1 | 391 | 12 | 402 | 0.0 | 802 |
| MS.gene86660.t1 | MTR_7g028050 | 99.666 | 299 | 1 | 0 | 93 | 391 | 1 | 299 | 0.0 | 613 |
| MS.gene86660.t1 | MTR_5g047260 | 60.870 | 391 | 148 | 3 | 1 | 391 | 28 | 413 | 3.28e-174 | 495 |
| MS.gene86660.t1 | MTR_7g022470 | 56.770 | 421 | 174 | 4 | 1 | 417 | 21 | 437 | 2.33e-162 | 465 |
| MS.gene86660.t1 | MTR_5g011580 | 53.197 | 391 | 170 | 3 | 1 | 391 | 17 | 394 | 1.43e-142 | 414 |
| MS.gene86660.t1 | MTR_4g101950 | 52.174 | 391 | 174 | 3 | 1 | 391 | 17 | 394 | 1.10e-140 | 409 |
| MS.gene86660.t1 | MTR_5g047260 | 58.702 | 339 | 134 | 4 | 1 | 339 | 28 | 360 | 2.44e-140 | 405 |
| MS.gene86660.t1 | MTR_3g088885 | 51.637 | 397 | 183 | 5 | 1 | 390 | 20 | 414 | 6.20e-138 | 403 |
| MS.gene86660.t1 | MTR_1g029520 | 50.380 | 395 | 186 | 5 | 6 | 390 | 254 | 648 | 1.36e-129 | 389 |
| MS.gene86660.t1 | MTR_5g047260 | 59.233 | 287 | 112 | 3 | 1 | 287 | 28 | 309 | 2.62e-118 | 348 |
| MS.gene86660.t1 | MTR_5g015170 | 43.276 | 409 | 212 | 5 | 1 | 389 | 20 | 428 | 3.76e-114 | 343 |
| MS.gene86660.t1 | MTR_4g097380 | 40.842 | 404 | 225 | 3 | 1 | 390 | 39 | 442 | 7.34e-104 | 317 |
| MS.gene86660.t1 | MTR_1g012740 | 37.903 | 124 | 70 | 2 | 231 | 353 | 30 | 147 | 5.10e-21 | 90.1 |
| MS.gene86660.t1 | MTR_1g012740 | 37.037 | 135 | 67 | 5 | 5 | 138 | 29 | 146 | 1.34e-11 | 63.2 |
| MS.gene86660.t1 | MTR_1g112170 | 27.363 | 201 | 113 | 6 | 4 | 178 | 74 | 267 | 4.94e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86660.t1 | AT3G01990 | 72.351 | 387 | 100 | 4 | 1 | 386 | 27 | 407 | 0.0 | 563 |
| MS.gene86660.t1 | AT3G01990 | 72.351 | 387 | 100 | 4 | 1 | 386 | 27 | 407 | 0.0 | 563 |
| MS.gene86660.t1 | AT3G01990 | 72.351 | 387 | 100 | 4 | 1 | 386 | 27 | 407 | 0.0 | 562 |
| MS.gene86660.t1 | AT3G01990 | 72.351 | 387 | 100 | 4 | 1 | 386 | 13 | 393 | 0.0 | 561 |
| MS.gene86660.t1 | AT3G01990 | 72.351 | 387 | 100 | 4 | 1 | 386 | 13 | 393 | 0.0 | 561 |
| MS.gene86660.t1 | AT3G01990 | 72.351 | 387 | 100 | 4 | 1 | 386 | 13 | 393 | 0.0 | 561 |
| MS.gene86660.t1 | AT1G69040 | 64.031 | 392 | 138 | 3 | 1 | 391 | 22 | 411 | 0.0 | 518 |
| MS.gene86660.t1 | AT1G69040 | 64.031 | 392 | 138 | 3 | 1 | 391 | 18 | 407 | 0.0 | 517 |
| MS.gene86660.t1 | AT2G03730 | 59.352 | 401 | 150 | 5 | 1 | 391 | 22 | 419 | 9.73e-163 | 466 |
| MS.gene86660.t1 | AT2G03730 | 59.352 | 401 | 150 | 5 | 1 | 391 | 22 | 419 | 9.73e-163 | 466 |
| MS.gene86660.t1 | AT3G01990 | 70.533 | 319 | 87 | 4 | 1 | 318 | 27 | 339 | 4.55e-159 | 452 |
| MS.gene86660.t1 | AT3G01990 | 69.444 | 324 | 92 | 4 | 1 | 323 | 27 | 344 | 7.67e-159 | 452 |
| MS.gene86660.t1 | AT3G01990 | 69.444 | 324 | 92 | 4 | 1 | 323 | 13 | 330 | 1.35e-158 | 451 |
| MS.gene86660.t1 | AT1G76990 | 52.645 | 397 | 178 | 5 | 1 | 390 | 20 | 413 | 9.74e-143 | 415 |
| MS.gene86660.t1 | AT1G76990 | 52.645 | 397 | 178 | 5 | 1 | 390 | 20 | 413 | 9.74e-143 | 415 |
| MS.gene86660.t1 | AT1G76990 | 52.645 | 397 | 178 | 5 | 1 | 390 | 20 | 413 | 9.74e-143 | 415 |
| MS.gene86660.t1 | AT1G76990 | 52.645 | 397 | 178 | 5 | 1 | 390 | 20 | 413 | 9.74e-143 | 415 |
| MS.gene86660.t1 | AT1G76990 | 52.645 | 397 | 178 | 5 | 1 | 390 | 20 | 413 | 9.74e-143 | 415 |
| MS.gene86660.t1 | AT1G12420 | 52.455 | 387 | 171 | 3 | 1 | 386 | 17 | 391 | 5.27e-135 | 395 |
| MS.gene86660.t1 | AT4G22780 | 52.320 | 388 | 168 | 4 | 1 | 386 | 17 | 389 | 5.77e-134 | 393 |
| MS.gene86660.t1 | AT4G22780 | 52.320 | 388 | 168 | 4 | 1 | 386 | 17 | 389 | 5.77e-134 | 393 |
| MS.gene86660.t1 | AT3G01990 | 68.310 | 284 | 83 | 4 | 1 | 283 | 27 | 304 | 7.83e-134 | 387 |
| MS.gene86660.t1 | AT3G01990 | 68.310 | 284 | 83 | 4 | 1 | 283 | 13 | 290 | 1.74e-133 | 386 |
| MS.gene86660.t1 | AT5G25320 | 44.131 | 426 | 186 | 6 | 3 | 385 | 24 | 440 | 3.28e-127 | 377 |
| MS.gene86660.t1 | AT5G25320 | 43.902 | 410 | 178 | 6 | 19 | 385 | 1 | 401 | 3.51e-122 | 363 |
| MS.gene86660.t1 | AT5G65890 | 42.518 | 421 | 208 | 6 | 1 | 394 | 21 | 434 | 2.37e-110 | 333 |
| MS.gene86660.t1 | AT5G65890 | 42.518 | 421 | 208 | 6 | 1 | 394 | 21 | 434 | 2.37e-110 | 333 |
| MS.gene86660.t1 | AT1G12420 | 50.755 | 331 | 150 | 3 | 57 | 386 | 1 | 319 | 1.01e-105 | 318 |
| MS.gene86660.t1 | AT5G25320 | 43.370 | 362 | 153 | 6 | 3 | 321 | 24 | 376 | 1.38e-99 | 302 |
| MS.gene86660.t1 | AT5G65890 | 41.131 | 389 | 195 | 6 | 33 | 394 | 1 | 382 | 8.44e-96 | 294 |
| MS.gene86660.t1 | AT5G65890 | 41.131 | 389 | 195 | 6 | 33 | 394 | 1 | 382 | 8.44e-96 | 294 |
| MS.gene86660.t1 | AT5G65890 | 41.176 | 306 | 163 | 4 | 104 | 394 | 17 | 320 | 2.24e-74 | 237 |
| MS.gene86660.t1 | AT5G04740 | 27.429 | 175 | 101 | 4 | 4 | 152 | 95 | 269 | 2.63e-12 | 67.8 |
Find 101 sgRNAs with CRISPR-Local
Find 333 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTGATGGAGTTTGGTTTA+TGG | 0.140421 | 7.4:+73950412 | MS.gene86660:CDS |
| TCTTTCAGCCTCTGAGCTTA+TGG | 0.227474 | 7.4:-73952507 | None:intergenic |
| TATGAACCTTGTGATTAAAA+AGG | 0.256217 | 7.4:+73950379 | MS.gene86660:CDS |
| CGTCCCGCCTCTCCACAATA+AGG | 0.298680 | 7.4:+73951619 | MS.gene86660:CDS |
| CTTTCAGCCTCTGAGCTTAT+GGG | 0.300453 | 7.4:-73952506 | None:intergenic |
| AGAAAGGACAGGGGCTTATC+AGG | 0.309556 | 7.4:+73951959 | MS.gene86660:CDS |
| TCAATAATCTTCGGATCAAC+TGG | 0.310582 | 7.4:-73953216 | None:intergenic |
| CACACTGTTATTGAACTTAC+TGG | 0.317762 | 7.4:+73951444 | MS.gene86660:CDS |
| TGAAAACGCCACTGTTATTC+AGG | 0.320918 | 7.4:+73949953 | MS.gene86660:CDS |
| ATATTTCCTCTGATGGAGTT+TGG | 0.326275 | 7.4:+73950405 | MS.gene86660:CDS |
| CTCATTGACGTTTCAAAGCT+CGG | 0.341739 | 7.4:-73951390 | None:intergenic |
| ATCAGATTATGTTTGCTGAT+AGG | 0.355750 | 7.4:+73951739 | MS.gene86660:CDS |
| ACATCCTGGAGTTACGTATA+GGG | 0.365344 | 7.4:+73951704 | MS.gene86660:CDS |
| ATTTGCTTTGCAACGTCCTC+AGG | 0.366403 | 7.4:+73951643 | MS.gene86660:CDS |
| GGACTTAGAGAAAGAGATAA+AGG | 0.373479 | 7.4:+73951786 | MS.gene86660:CDS |
| TCAGATTATGTTTGCTGATA+GGG | 0.377860 | 7.4:+73951740 | MS.gene86660:CDS |
| CACATCCTGGAGTTACGTAT+AGG | 0.390969 | 7.4:+73951703 | MS.gene86660:CDS |
| GCAGAAATATCAACAGAAAA+CGG | 0.397174 | 7.4:+73953150 | MS.gene86660:CDS |
| GAGGCGGGACGGATCTTCTA+TGG | 0.405276 | 7.4:-73951607 | None:intergenic |
| ACGTGGTTACCGCTGAGATT+TGG | 0.422704 | 7.4:+73951526 | MS.gene86660:CDS |
| CGTCAATGAGAGAGTCTGTT+GGG | 0.427819 | 7.4:+73951403 | MS.gene86660:CDS |
| ATCTTCTATGGCACAACCAC+TGG | 0.440100 | 7.4:-73951595 | None:intergenic |
| GAGACAGTTACATGCGGAAA+TGG | 0.443364 | 7.4:-73951810 | None:intergenic |
| AAGGCTTATATTTCCTCTGA+TGG | 0.443541 | 7.4:+73950398 | MS.gene86660:CDS |
| CAGAAATATCAACAGAAAAC+GGG | 0.444348 | 7.4:+73953151 | MS.gene86660:CDS |
| GTCCCGCCTCTCCACAATAA+GGG | 0.458534 | 7.4:+73951620 | MS.gene86660:CDS |
| CGGATTGAATCAATAATCTT+CGG | 0.460770 | 7.4:-73953225 | None:intergenic |
| TTATATGATCCTTCGAATGC+TGG | 0.461750 | 7.4:+73954070 | MS.gene86660:CDS |
| AAACAAACACGGGATACTCT+TGG | 0.470655 | 7.4:+73950334 | MS.gene86660:CDS |
| ATCCCTTATTGTGGAGAGGC+GGG | 0.479361 | 7.4:-73951622 | None:intergenic |
| TTTAATGTGACGGATCGAAA+TGG | 0.483271 | 7.4:+73950555 | MS.gene86660:CDS |
| GGTTCATATCTGAAATAACT+TGG | 0.492510 | 7.4:-73950364 | None:intergenic |
| CCGTGTCGCCGATCTGTCTA+CGG | 0.499307 | 7.4:-73953245 | None:intergenic |
| TTGATGAAAGATGAATACTA+TGG | 0.510333 | 7.4:+73954041 | MS.gene86660:CDS |
| TGTCTCAGACTGTACTGAAA+GGG | 0.510423 | 7.4:+73951827 | MS.gene86660:CDS |
| TGCTGGTTGAGCTGCGTACA+TGG | 0.511364 | 7.4:+73954087 | MS.gene86660:CDS |
| AGAATAAATATTACCTAGGT+GGG | 0.511593 | 7.4:-73949144 | None:intergenic |
| GGACTATGAAAGAGTTGAAA+GGG | 0.513096 | 7.4:+73951761 | MS.gene86660:CDS |
| CTTACTGGCACCGACAGGCC+TGG | 0.516664 | 7.4:+73951459 | MS.gene86660:CDS |
| TGAAGCGGCAATTGAGAGGC+GGG | 0.524380 | 7.4:+73952550 | MS.gene86660:CDS |
| CGGTAACCACGTTGCAGCGA+AGG | 0.527207 | 7.4:-73951515 | None:intergenic |
| GATTCAATCCGTAGACAGAT+CGG | 0.527568 | 7.4:+73953237 | MS.gene86660:CDS |
| TTATATGCAGGGGATGGAGC+TGG | 0.527638 | 7.4:+73953047 | MS.gene86660:intron |
| ATGGAATGAGGCTGCTAGAG+TGG | 0.530587 | 7.4:+73954106 | MS.gene86660:CDS |
| CAGATTTCAGATAGTAAACC+AGG | 0.531208 | 7.4:-73951477 | None:intergenic |
| AAAACTGCACTTTCACATCC+TGG | 0.532657 | 7.4:+73951690 | MS.gene86660:CDS |
| ACAATATCAAACAACAGCTT+CGG | 0.533003 | 7.4:-73951885 | None:intergenic |
| ATGGTGTGGTTCAGACAGAA+AGG | 0.542138 | 7.4:+73951943 | MS.gene86660:CDS |
| GGCACAACCACTGGAATCAT+CGG | 0.542861 | 7.4:-73951586 | None:intergenic |
| GTGGTTCAGACAGAAAGGAC+AGG | 0.555199 | 7.4:+73951948 | MS.gene86660:CDS |
| GATCGGCGACACGGTACTGC+AGG | 0.560359 | 7.4:+73953254 | MS.gene86660:CDS |
| AAGAATAAATATTACCTAGG+TGG | 0.560958 | 7.4:-73949145 | None:intergenic |
| TGCTTTGCAACGTCCTCAGG+GGG | 0.561556 | 7.4:+73951646 | MS.gene86660:CDS |
| TTTGCTTTGCAACGTCCTCA+GGG | 0.563312 | 7.4:+73951644 | MS.gene86660:CDS |
| TTGAACTTACTGGCACCGAC+AGG | 0.574450 | 7.4:+73951454 | MS.gene86660:CDS |
| CTGTCTCAGACTGTACTGAA+AGG | 0.574748 | 7.4:+73951826 | MS.gene86660:CDS |
| ATAACAGTGTGTTCTTCAGT+AGG | 0.575373 | 7.4:-73951432 | None:intergenic |
| CTATCCCTATACGTAACTCC+AGG | 0.576701 | 7.4:-73951708 | None:intergenic |
| AGTCATTGATTATATTCAGA+GGG | 0.577703 | 7.4:+73950599 | MS.gene86660:CDS |
| AATTGAGAGGCGGGCATCTG+AGG | 0.581375 | 7.4:+73952559 | MS.gene86660:CDS |
| AGACCGTGTAGGACTACTCT+CGG | 0.582609 | 7.4:+73953083 | MS.gene86660:CDS |
| GATGGAGTTTGGTTTATGGA+TGG | 0.582629 | 7.4:+73950416 | MS.gene86660:CDS |
| GGGACTATGAAAGAGTTGAA+AGG | 0.583175 | 7.4:+73951760 | MS.gene86660:CDS |
| CCGTAGACAGATCGGCGACA+CGG | 0.589318 | 7.4:+73953245 | MS.gene86660:CDS |
| GTCTTGAAGCGGCAATTGAG+AGG | 0.589946 | 7.4:+73952546 | MS.gene86660:CDS |
| GCAAAGCAAATCCCTTATTG+TGG | 0.590680 | 7.4:-73951631 | None:intergenic |
| TATGAAAGAGTTGAAAGGGC+AGG | 0.592168 | 7.4:+73951765 | MS.gene86660:CDS |
| CTTATTGTGGAGAGGCGGGA+CGG | 0.600464 | 7.4:-73951618 | None:intergenic |
| CAATAATCTTCGGATCAACT+GGG | 0.600617 | 7.4:-73953215 | None:intergenic |
| AGATAGTAAACCAGGCCTGT+CGG | 0.611664 | 7.4:-73951469 | None:intergenic |
| AAGTCATTGATTATATTCAG+AGG | 0.614562 | 7.4:+73950598 | MS.gene86660:CDS |
| TTGAAGCGGCAATTGAGAGG+CGG | 0.615320 | 7.4:+73952549 | MS.gene86660:CDS |
| AATCCCTTATTGTGGAGAGG+CGG | 0.617749 | 7.4:-73951623 | None:intergenic |
| ATCATCGGTTACATGAACTA+CGG | 0.623701 | 7.4:-73951571 | None:intergenic |
| TGGTTCAGACAGAAAGGACA+GGG | 0.627734 | 7.4:+73951949 | MS.gene86660:CDS |
| ACTTATACAGTGTCTTGAAG+CGG | 0.628410 | 7.4:+73952535 | MS.gene86660:CDS |
| CATAAACCAAACTCCATCAG+AGG | 0.629050 | 7.4:-73950411 | None:intergenic |
| GCAGCTCAACCAGCATTCGA+AGG | 0.635549 | 7.4:-73954079 | None:intergenic |
| ACGTCAATGAGAGAGTCTGT+TGG | 0.641528 | 7.4:+73951402 | MS.gene86660:CDS |
| TAAGGAGGATGAACCCACCT+AGG | 0.644112 | 7.4:+73949131 | None:intergenic |
| GCAAATCCCTTATTGTGGAG+AGG | 0.645179 | 7.4:-73951626 | None:intergenic |
| TTGCTTTGCAACGTCCTCAG+GGG | 0.645987 | 7.4:+73951645 | MS.gene86660:CDS |
| AACTGGGTTACCAGTTACAT+CGG | 0.647131 | 7.4:-73953199 | None:intergenic |
| CGCAGACCTTCGCTGCAACG+TGG | 0.648588 | 7.4:+73951509 | MS.gene86660:CDS |
| GACTACTCTCGGATATCACA+AGG | 0.653562 | 7.4:+73953094 | MS.gene86660:CDS |
| TGAGCTGCGTACATGGAATG+AGG | 0.656944 | 7.4:+73954094 | MS.gene86660:CDS |
| TTGACAGTGTAAACAAACAC+GGG | 0.657246 | 7.4:+73950324 | MS.gene86660:CDS |
| TGATACATAAACTGTTCTCG+CGG | 0.658352 | 7.4:-73953122 | None:intergenic |
| GTTGACAGTGTAAACAAACA+CGG | 0.663549 | 7.4:+73950323 | MS.gene86660:CDS |
| CATGTAACCGATGATTCCAG+TGG | 0.665641 | 7.4:+73951579 | MS.gene86660:CDS |
| AGAGTGGAGCAGTGTTCACA+TGG | 0.675233 | 7.4:+73954122 | MS.gene86660:CDS |
| TGGCTTTCCCATAAGCTCAG+AGG | 0.681534 | 7.4:+73952499 | MS.gene86660:CDS |
| GTCAATGAGAGAGTCTGTTG+GGG | 0.683733 | 7.4:+73951404 | MS.gene86660:CDS |
| AATATCAACAGAAAACGGGA+AGG | 0.687354 | 7.4:+73953155 | MS.gene86660:CDS |
| TACTGAAAGGGATTATACTG+TGG | 0.689453 | 7.4:+73951839 | MS.gene86660:CDS |
| TTGTGCACAGAAGACCGTGT+AGG | 0.706816 | 7.4:+73953072 | MS.gene86660:CDS |
| TATCCGAGAGTAGTCCTACA+CGG | 0.721848 | 7.4:-73953086 | None:intergenic |
| AAGCCATACCTGAATAACAG+TGG | 0.722877 | 7.4:-73949961 | None:intergenic |
| CAGTCTGAGACAGTTACATG+CGG | 0.730560 | 7.4:-73951816 | None:intergenic |
| ATTATGCGTCCAAATCTCAG+CGG | 0.777134 | 7.4:-73951535 | None:intergenic |
| GGTTCAGACAGAAAGGACAG+GGG | 0.787336 | 7.4:+73951950 | MS.gene86660:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTATAATTGATCAATAA+TGG | - | chr7.4:73950918-73950937 | None:intergenic | 10.0% |
| !! | AATCTTATTGAATATAAAAA+AGG | - | chr7.4:73950290-73950309 | None:intergenic | 10.0% |
| !! | ATAAGATAATTAAAATTTGA+GGG | - | chr7.4:73949243-73949262 | None:intergenic | 10.0% |
| !! | ATCTTATTGAATATAAAAAA+GGG | - | chr7.4:73950289-73950308 | None:intergenic | 10.0% |
| !!! | ACATATTTATATATTTTTGT+TGG | - | chr7.4:73949861-73949880 | None:intergenic | 10.0% |
| !!! | ATGTTTTTAAAAATATTGTT+TGG | + | chr7.4:73952945-73952964 | MS.gene86660:intron | 10.0% |
| !!! | TTATCAATTTTTTATTTTGA+TGG | + | chr7.4:73949318-73949337 | MS.gene86660:intron | 10.0% |
| !! | ATATATAAATATGTTTGTGT+TGG | + | chr7.4:73949867-73949886 | MS.gene86660:intron | 15.0% |
| !! | GATAAGATAATTAAAATTTG+AGG | - | chr7.4:73949244-73949263 | None:intergenic | 15.0% |
| !! | GTGAATAAAAATTAGTTATA+AGG | - | chr7.4:73952897-73952916 | None:intergenic | 15.0% |
| !! | TATATTATTATTGTTATGGT+TGG | + | chr7.4:73949214-73949233 | MS.gene86660:intron | 15.0% |
| !!! | AAACATTATTATTGATGTTT+TGG | + | chr7.4:73954000-73954019 | MS.gene86660:intron | 15.0% |
| !! | AATGAAACTTAACAGTATAT+AGG | - | chr7.4:73952360-73952379 | None:intergenic | 20.0% |
| !! | ACAAAAATCCAATTAATACT+TGG | - | chr7.4:73950523-73950542 | None:intergenic | 20.0% |
| !! | ATATACTGTTAAGTTTCATT+CGG | + | chr7.4:73952360-73952379 | MS.gene86660:intron | 20.0% |
| !! | ATGAAGAATAAATATTACCT+AGG | - | chr7.4:73949151-73949170 | None:intergenic | 20.0% |
| !! | TACTTATATATATAGTTGTG+AGG | - | chr7.4:73952307-73952326 | None:intergenic | 20.0% |
| !! | TAGATTATCAAATCCAAAAA+AGG | + | chr7.4:73953625-73953644 | MS.gene86660:intron | 20.0% |
| !! | TCTTGACAATCTATAATTAA+GGG | - | chr7.4:73951311-73951330 | None:intergenic | 20.0% |
| !! | TTACATAATCATATCAATAG+AGG | + | chr7.4:73953976-73953995 | MS.gene86660:intron | 20.0% |
| !! | TTATACAACAAATGCAAATT+AGG | - | chr7.4:73952420-73952439 | None:intergenic | 20.0% |
| !! | TTCAATGTAATTACATATGT+CGG | - | chr7.4:73950179-73950198 | None:intergenic | 20.0% |
| !! | TTCTTGACAATCTATAATTA+AGG | - | chr7.4:73951312-73951331 | None:intergenic | 20.0% |
| !!! | AAATGAACTATTTCCTTTTT+TGG | - | chr7.4:73953641-73953660 | None:intergenic | 20.0% |
| !!! | AATAAGATTGTTTGTTTTAC+AGG | + | chr7.4:73950301-73950320 | MS.gene86660:intron | 20.0% |
| !!! | AATTTTGTGAAAATATACAG+AGG | - | chr7.4:73949997-73950016 | None:intergenic | 20.0% |
| !!! | ACTAAATCATAGGTATTTTA+AGG | - | chr7.4:73953544-73953563 | None:intergenic | 20.0% |
| !!! | AGTTTTCTATTACTAATATG+TGG | + | chr7.4:73951284-73951303 | MS.gene86660:intron | 20.0% |
| !!! | ATTTTGTGAAAATATACAGA+GGG | - | chr7.4:73949996-73950015 | None:intergenic | 20.0% |
| !!! | TATTTTTTCTCTCAAAATGT+TGG | + | chr7.4:73951147-73951166 | MS.gene86660:intron | 20.0% |
| !!! | TCTTTTCTTTAAAAGAAGTT+AGG | - | chr7.4:73952971-73952990 | None:intergenic | 20.0% |
| !!! | TGATTTTCTCAAATTATTAG+CGG | + | chr7.4:73950204-73950223 | MS.gene86660:intron | 20.0% |
| !!! | TTGTTTAGGAGTTTTATATT+CGG | + | chr7.4:73952468-73952487 | MS.gene86660:intron | 20.0% |
| !!! | TTTGAAATTGGTTTTGATTT+TGG | + | chr7.4:73950767-73950786 | MS.gene86660:intron | 20.0% |
| !!! | TTTTTTGGATTTGATAATCT+AGG | - | chr7.4:73953626-73953645 | None:intergenic | 20.0% |
| ! | AAATTGCGTTATTGATAAAC+TGG | - | chr7.4:73951177-73951196 | None:intergenic | 25.0% |
| ! | AACAATTAACCTAATACCAT+TGG | - | chr7.4:73952759-73952778 | None:intergenic | 25.0% |
| ! | AAGAATAAATATTACCTAGG+TGG | - | chr7.4:73949148-73949167 | None:intergenic | 25.0% |
| ! | AATTGCGTTATTGATAAACT+GGG | - | chr7.4:73951176-73951195 | None:intergenic | 25.0% |
| ! | ACTAAGATATGTTTATATGC+AGG | + | chr7.4:73953035-73953054 | MS.gene86660:intron | 25.0% |
| ! | AGAAAAAAAACTAGGCTTAA+CGG | - | chr7.4:73952637-73952656 | None:intergenic | 25.0% |
| ! | AGAATAAATATTACCTAGGT+GGG | - | chr7.4:73949147-73949166 | None:intergenic | 25.0% |
| ! | AGGGGAAATAATTATTGAAT+CGG | + | chr7.4:73953905-73953924 | MS.gene86660:intron | 25.0% |
| ! | AGTATACCATTGAAGAATAA+GGG | - | chr7.4:73953018-73953037 | None:intergenic | 25.0% |
| ! | CATTTAGTTGTGTTTGTATA+TGG | + | chr7.4:73953656-73953675 | MS.gene86660:intron | 25.0% |
| ! | CCAAAAGAAGAAAAAAAACT+AGG | - | chr7.4:73952645-73952664 | None:intergenic | 25.0% |
| ! | CTAAGATATGTTTATATGCA+GGG | + | chr7.4:73953036-73953055 | MS.gene86660:intron | 25.0% |
| ! | GAAATGAACTTGAATCAATT+AGG | + | chr7.4:73949735-73949754 | MS.gene86660:intron | 25.0% |
| ! | GTCTACTAATTAAATTGGTA+TGG | - | chr7.4:73951079-73951098 | None:intergenic | 25.0% |
| ! | GTTGAGTCTACTAATTAAAT+TGG | - | chr7.4:73951084-73951103 | None:intergenic | 25.0% |
| ! | TAAGATATGTTTATATGCAG+GGG | + | chr7.4:73953037-73953056 | MS.gene86660:intron | 25.0% |
| ! | TAATTATTGAATCGGAATTG+AGG | + | chr7.4:73953913-73953932 | MS.gene86660:intron | 25.0% |
| ! | TAATTTCCTCTCTTAACTAT+TGG | + | chr7.4:73950439-73950458 | MS.gene86660:intron | 25.0% |
| ! | TAGTATACCATTGAAGAATA+AGG | - | chr7.4:73953019-73953038 | None:intergenic | 25.0% |
| ! | TATGAAACACATACACTTAT+CGG | + | chr7.4:73950115-73950134 | MS.gene86660:intron | 25.0% |
| ! | TATGAACCTTGTGATTAAAA+AGG | + | chr7.4:73950379-73950398 | MS.gene86660:CDS | 25.0% |
| ! | TCCAGGATAACTTATTAAAA+CGG | - | chr7.4:73952210-73952229 | None:intergenic | 25.0% |
| ! | TGTACAGTAACATATTACTT+AGG | + | chr7.4:73953580-73953599 | MS.gene86660:intron | 25.0% |
| ! | TTGATGAAAGATGAATACTA+TGG | + | chr7.4:73954041-73954060 | MS.gene86660:CDS | 25.0% |
| ! | TTTGGAAATTTATTAGACCA+AGG | + | chr7.4:73953870-73953889 | MS.gene86660:intron | 25.0% |
| !! | AAGTCATTGATTATATTCAG+AGG | + | chr7.4:73950598-73950617 | MS.gene86660:CDS | 25.0% |
| !! | AGTCATTGATTATATTCAGA+GGG | + | chr7.4:73950599-73950618 | MS.gene86660:CDS | 25.0% |
| !! | GGAATATGTAGATTTGAAAT+TGG | + | chr7.4:73950755-73950774 | MS.gene86660:intron | 25.0% |
| !! | TATAAGCCTTTTTAATCACA+AGG | - | chr7.4:73950388-73950407 | None:intergenic | 25.0% |
| !! | TTAATGAACTCGAATTGTTT+TGG | + | chr7.4:73949606-73949625 | MS.gene86660:intron | 25.0% |
| !!! | ACTATTTCTTCTTTTTTGAC+TGG | - | chr7.4:73950046-73950065 | None:intergenic | 25.0% |
| !!! | ATTTTTTTTGAAACAGCCAA+TGG | + | chr7.4:73952740-73952759 | MS.gene86660:intron | 25.0% |
| !!! | CCTAGTTTTTTTTCTTCTTT+TGG | + | chr7.4:73952642-73952661 | MS.gene86660:intron | 25.0% |
| !!! | TATATAGTTGTGAGGTTTTT+TGG | - | chr7.4:73952299-73952318 | None:intergenic | 25.0% |
| AAACAGAGACTATGTTTGAT+GGG | - | chr7.4:73952074-73952093 | None:intergenic | 30.0% | |
| AAACCAACGTAATTTCGATT+AGG | - | chr7.4:73950948-73950967 | None:intergenic | 30.0% | |
| AATCAACATGCAGAAAATGA+GGG | - | chr7.4:73950832-73950851 | None:intergenic | 30.0% | |
| ACAACAATTGGATTTCTCTT+CGG | + | chr7.4:73953318-73953337 | MS.gene86660:intron | 30.0% | |
| ACAAGTTCAGAAAACGAAAA+AGG | - | chr7.4:73952032-73952051 | None:intergenic | 30.0% | |
| ACAATATCAAACAACAGCTT+CGG | - | chr7.4:73951888-73951907 | None:intergenic | 30.0% | |
| ACTTGACTTTACTTACCTTA+TGG | + | chr7.4:73949782-73949801 | MS.gene86660:intron | 30.0% | |
| AGTAAAAATTGTTCCAACTC+AGG | - | chr7.4:73949765-73949784 | None:intergenic | 30.0% | |
| AGTTTATGTAAGCACTTATC+TGG | - | chr7.4:73952132-73952151 | None:intergenic | 30.0% | |
| ATAAATAATAACACACCTGC+TGG | + | chr7.4:73952586-73952605 | MS.gene86660:intron | 30.0% | |
| ATATGTTTGTGTTGGAATTG+TGG | + | chr7.4:73949875-73949894 | MS.gene86660:intron | 30.0% | |
| ATTGATTATATTCAGAGGGT+AGG | + | chr7.4:73950603-73950622 | MS.gene86660:intron | 30.0% | |
| ATTGCGTTATTGATAAACTG+GGG | - | chr7.4:73951175-73951194 | None:intergenic | 30.0% | |
| CAGAAATATCAACAGAAAAC+GGG | + | chr7.4:73953151-73953170 | MS.gene86660:CDS | 30.0% | |
| CGGATTGAATCAATAATCTT+CGG | - | chr7.4:73953228-73953247 | None:intergenic | 30.0% | |
| CTCAAATTGACAAAAGTGAA+GGG | - | chr7.4:73951115-73951134 | None:intergenic | 30.0% | |
| CTTACACTAGACTAAATCAT+AGG | - | chr7.4:73953554-73953573 | None:intergenic | 30.0% | |
| CTTCTGATCCAAGTATTAAT+TGG | + | chr7.4:73950512-73950531 | MS.gene86660:intron | 30.0% | |
| GAAATAAGCTGATGTTTGTT+TGG | + | chr7.4:73952709-73952728 | MS.gene86660:intron | 30.0% | |
| GAAATTTATTAGACCAAGGT+TGG | + | chr7.4:73953874-73953893 | MS.gene86660:intron | 30.0% | |
| GCAGAAATATCAACAGAAAA+CGG | + | chr7.4:73953150-73953169 | MS.gene86660:CDS | 30.0% | |
| TCTCAAATTGACAAAAGTGA+AGG | - | chr7.4:73951116-73951135 | None:intergenic | 30.0% | |
| TGGTTACGCATATTCATATA+TGG | - | chr7.4:73949443-73949462 | None:intergenic | 30.0% | |
| TGTTTCATAGATTGCAATCA+AGG | - | chr7.4:73950104-73950123 | None:intergenic | 30.0% | |
| TTAATGAGCTTGAATCGATT+TGG | + | chr7.4:73949482-73949501 | MS.gene86660:intron | 30.0% | |
| TTTCCTAATCGAAATTACGT+TGG | + | chr7.4:73950942-73950961 | MS.gene86660:intron | 30.0% | |
| ! | AATCTTCAAGTTAAGTAAGC+AGG | + | chr7.4:73950721-73950740 | MS.gene86660:intron | 30.0% |
| ! | ATCAGATTATGTTTGCTGAT+AGG | + | chr7.4:73951739-73951758 | MS.gene86660:CDS | 30.0% |
| ! | ATGAGCTTTTCAAATCAAGT+AGG | - | chr7.4:73952852-73952871 | None:intergenic | 30.0% |
| ! | ATGCAGTATGTAGTTTTTCA+TGG | + | chr7.4:73951924-73951943 | MS.gene86660:CDS | 30.0% |
| ! | CCAAGAGTAAATAGTACTTT+TGG | + | chr7.4:73953706-73953725 | MS.gene86660:intron | 30.0% |
| ! | GAGTAAATAGTACTTTTGGT+TGG | + | chr7.4:73953710-73953729 | MS.gene86660:intron | 30.0% |
| ! | GGTTCATATCTGAAATAACT+TGG | - | chr7.4:73950367-73950386 | None:intergenic | 30.0% |
| ! | TCAGATTATGTTTGCTGATA+GGG | + | chr7.4:73951740-73951759 | MS.gene86660:CDS | 30.0% |
| ! | TTTTAGTCCATGCAAATTTG+TGG | + | chr7.4:73951194-73951213 | MS.gene86660:intron | 30.0% |
| ! | TTTTATATTCGGCATGTTGA+TGG | + | chr7.4:73952479-73952498 | MS.gene86660:CDS | 30.0% |
| ! | TTTTCATCAAAGCGAATTGT+TGG | + | chr7.4:73950872-73950891 | MS.gene86660:intron | 30.0% |
| ! | TTTTGCAGTGTTTAATGTGA+CGG | + | chr7.4:73950545-73950564 | MS.gene86660:intron | 30.0% |
| !! | CCAAAAGTACTATTTACTCT+TGG | - | chr7.4:73953709-73953728 | None:intergenic | 30.0% |
| !! | TACTTTTGGTTGGTGTAATT+TGG | + | chr7.4:73953720-73953739 | MS.gene86660:intron | 30.0% |
| !! | TCGTTTTCTGAACTTGTTTA+GGG | + | chr7.4:73952035-73952054 | MS.gene86660:intron | 30.0% |
| !! | TGAAGATTTCTAGCAAAGAA+CGG | - | chr7.4:73950709-73950728 | None:intergenic | 30.0% |
| !! | TTAATTGGCTCGAATCAATT+TGG | + | chr7.4:73949544-73949563 | MS.gene86660:intron | 30.0% |
| !! | TTCGTTTTCTGAACTTGTTT+AGG | + | chr7.4:73952034-73952053 | MS.gene86660:intron | 30.0% |
| AAAACGATCCTAAAGATCAG+AGG | - | chr7.4:73950808-73950827 | None:intergenic | 35.0% | |
| AACTATTGGCAGGCATAATT+AGG | + | chr7.4:73950453-73950472 | MS.gene86660:intron | 35.0% | |
| AACTTAACAGTATATAGGCC+TGG | - | chr7.4:73952355-73952374 | None:intergenic | 35.0% | |
| AAGGCTTATATTTCCTCTGA+TGG | + | chr7.4:73950398-73950417 | MS.gene86660:CDS | 35.0% | |
| AATATCAACAGAAAACGGGA+AGG | + | chr7.4:73953155-73953174 | MS.gene86660:CDS | 35.0% | |
| ACTATTGGCAGGCATAATTA+GGG | + | chr7.4:73950454-73950473 | MS.gene86660:intron | 35.0% | |
| ACTTATACAGTGTCTTGAAG+CGG | + | chr7.4:73952535-73952554 | MS.gene86660:CDS | 35.0% | |
| AGCACAGATTCACATTTACA+TGG | - | chr7.4:73953749-73953768 | None:intergenic | 35.0% | |
| ATAACAGTGTGTTCTTCAGT+AGG | - | chr7.4:73951435-73951454 | None:intergenic | 35.0% | |
| ATATGCGTAACCAAGTGATT+CGG | + | chr7.4:73949450-73949469 | MS.gene86660:intron | 35.0% | |
| ATATGTTTATATGCAGGGGA+TGG | + | chr7.4:73953041-73953060 | MS.gene86660:intron | 35.0% | |
| ATATTTCCTCTGATGGAGTT+TGG | + | chr7.4:73950405-73950424 | MS.gene86660:CDS | 35.0% | |
| CAAACAGAGACTATGTTTGA+TGG | - | chr7.4:73952075-73952094 | None:intergenic | 35.0% | |
| CAATAATCTTCGGATCAACT+GGG | - | chr7.4:73953218-73953237 | None:intergenic | 35.0% | |
| CAATCAACATGCAGAAAATG+AGG | - | chr7.4:73950833-73950852 | None:intergenic | 35.0% | |
| CAATCTATGAAGCACAGATA+CGG | - | chr7.4:73950259-73950278 | None:intergenic | 35.0% | |
| CACACTGTTATTGAACTTAC+TGG | + | chr7.4:73951444-73951463 | MS.gene86660:CDS | 35.0% | |
| CAGATTTCAGATAGTAAACC+AGG | - | chr7.4:73951480-73951499 | None:intergenic | 35.0% | |
| CATCAAACATAGTCTCTGTT+TGG | + | chr7.4:73952073-73952092 | MS.gene86660:intron | 35.0% | |
| CTATTAGCCACAAATTTGCA+TGG | - | chr7.4:73951204-73951223 | None:intergenic | 35.0% | |
| GAAATAGCGAGAATATACAC+AGG | - | chr7.4:73953411-73953430 | None:intergenic | 35.0% | |
| GGACTATGAAAGAGTTGAAA+GGG | + | chr7.4:73951761-73951780 | MS.gene86660:CDS | 35.0% | |
| GGACTTAGAGAAAGAGATAA+AGG | + | chr7.4:73951786-73951805 | MS.gene86660:CDS | 35.0% | |
| GGTGAACGATCATTTCTTAA+CGG | - | chr7.4:73952011-73952030 | None:intergenic | 35.0% | |
| GTTGACAGTGTAAACAAACA+CGG | + | chr7.4:73950323-73950342 | MS.gene86660:CDS | 35.0% | |
| TACTGAAAGGGATTATACTG+TGG | + | chr7.4:73951839-73951858 | MS.gene86660:CDS | 35.0% | |
| TACTTGAGTTTGAATCCAAG+TGG | + | chr7.4:73949693-73949712 | MS.gene86660:intron | 35.0% | |
| TCAATAATCTTCGGATCAAC+TGG | - | chr7.4:73953219-73953238 | None:intergenic | 35.0% | |
| TCTCAAATTATTAGCGGTGT+CGG | + | chr7.4:73950210-73950229 | MS.gene86660:intron | 35.0% | |
| TGAAATAAGTCATTCCAACC+AGG | + | chr7.4:73952334-73952353 | MS.gene86660:intron | 35.0% | |
| TGGAATTTATACTGCACAGT+AGG | + | chr7.4:73953516-73953535 | MS.gene86660:intron | 35.0% | |
| TTATATGATCCTTCGAATGC+TGG | + | chr7.4:73954070-73954089 | MS.gene86660:CDS | 35.0% | |
| TTGAAACAGCCAATGGTATT+AGG | + | chr7.4:73952747-73952766 | MS.gene86660:intron | 35.0% | |
| TTGACAGTGTAAACAAACAC+GGG | + | chr7.4:73950324-73950343 | MS.gene86660:CDS | 35.0% | |
| ! | AATCCAATTGTTGTTCCTTG+AGG | - | chr7.4:73953312-73953331 | None:intergenic | 35.0% |
| ! | ATCATCGGTTACATGAACTA+CGG | - | chr7.4:73951574-73951593 | None:intergenic | 35.0% |
| ! | CACTCTCAATATTGTTGCTT+TGG | + | chr7.4:73953852-73953871 | MS.gene86660:intron | 35.0% |
| ! | GAAGAACACAGTTTGACTTT+AGG | - | chr7.4:73952175-73952194 | None:intergenic | 35.0% |
| ! | GAGAGTTGTTCATGTTGTTT+AGG | + | chr7.4:73952454-73952473 | MS.gene86660:intron | 35.0% |
| ! | GTATGTAGTTTTTCATGGTG+TGG | + | chr7.4:73951929-73951948 | MS.gene86660:CDS | 35.0% |
| !! | CATATTACTTAGGTTGAGTG+TGG | + | chr7.4:73953590-73953609 | MS.gene86660:intron | 35.0% |
| !! | CTGGGTTTGTTACTTCTATT+TGG | + | chr7.4:73949371-73949390 | MS.gene86660:intron | 35.0% |
| !! | GCCGTTTTAATAAGTTATCC+TGG | + | chr7.4:73952206-73952225 | MS.gene86660:intron | 35.0% |
| !! | GGTTTGTTACTTCTATTTGG+TGG | + | chr7.4:73949374-73949393 | MS.gene86660:intron | 35.0% |
| !! | TCAATTGACTCGAATCGATT+TGG | + | chr7.4:73949668-73949687 | MS.gene86660:intron | 35.0% |
| !! | TTATTTCTAACAGCCAGATC+AGG | - | chr7.4:73951243-73951262 | None:intergenic | 35.0% |
| !! | TTGGTTTTCTGTATTCTTCG+AGG | + | chr7.4:73950961-73950980 | MS.gene86660:intron | 35.0% |
| !! | TTTAATGTGACGGATCGAAA+TGG | + | chr7.4:73950555-73950574 | MS.gene86660:CDS | 35.0% |
| !!! | GTTTTTTGGAAGAGTGCTTA+TGG | - | chr7.4:73952285-73952304 | None:intergenic | 35.0% |
| !!! | TCTCTTCGGAAGTTTTTTCA+AGG | + | chr7.4:73953332-73953351 | MS.gene86660:intron | 35.0% |
| AAAACTGCACTTTCACATCC+TGG | + | chr7.4:73951690-73951709 | MS.gene86660:CDS | 40.0% | |
| AAACAAACACGGGATACTCT+TGG | + | chr7.4:73950334-73950353 | MS.gene86660:CDS | 40.0% | |
| AACCACTTGGATTCAAACTC+AGG | - | chr7.4:73949636-73949655 | None:intergenic | 40.0% | |
| AACTGGGTTACCAGTTACAT+CGG | - | chr7.4:73953202-73953221 | None:intergenic | 40.0% | |
| AAGCCATACCTGAATAACAG+TGG | - | chr7.4:73949964-73949983 | None:intergenic | 40.0% | |
| ACAAAAGTGAAGGGATCAGA+TGG | - | chr7.4:73951106-73951125 | None:intergenic | 40.0% | |
| ACATCCTGGAGTTACGTATA+GGG | + | chr7.4:73951704-73951723 | MS.gene86660:CDS | 40.0% | |
| AGCACACCCTTATTCTTCAA+TGG | + | chr7.4:73953009-73953028 | MS.gene86660:intron | 40.0% | |
| AGTAAGCAGGACAACGATAT+TGG | + | chr7.4:73950734-73950753 | MS.gene86660:intron | 40.0% | |
| AGTTTCATTCGGTCAGAACA+TGG | + | chr7.4:73952371-73952390 | MS.gene86660:intron | 40.0% | |
| ATCAAAGCGAATTGTTGGAG+GGG | + | chr7.4:73950877-73950896 | MS.gene86660:intron | 40.0% | |
| ATCAATCGCCTCTGATCTTT+AGG | + | chr7.4:73950797-73950816 | MS.gene86660:intron | 40.0% | |
| ATTATGCGTCCAAATCTCAG+CGG | - | chr7.4:73951538-73951557 | None:intergenic | 40.0% | |
| CATAAACCAAACTCCATCAG+AGG | - | chr7.4:73950414-73950433 | None:intergenic | 40.0% | |
| CATCAAAGCGAATTGTTGGA+GGG | + | chr7.4:73950876-73950895 | MS.gene86660:intron | 40.0% | |
| CTCATTGACGTTTCAAAGCT+CGG | - | chr7.4:73951393-73951412 | None:intergenic | 40.0% | |
| CTTATTTCAAGAAGCTCTCC+AGG | - | chr7.4:73952227-73952246 | None:intergenic | 40.0% | |
| GAGTAACTGAGTTTGAATCC+AGG | + | chr7.4:73949566-73949585 | MS.gene86660:intron | 40.0% | |
| GAGTTTGAATCCAAGTCGTT+CGG | + | chr7.4:73949512-73949531 | MS.gene86660:intron | 40.0% | |
| GAGTTTGAATCCAAGTGGTT+CGG | + | chr7.4:73949636-73949655 | MS.gene86660:intron | 40.0% | |
| GATTCAATCCGTAGACAGAT+CGG | + | chr7.4:73953237-73953256 | MS.gene86660:CDS | 40.0% | |
| GCAAAGCAAATCCCTTATTG+TGG | - | chr7.4:73951634-73951653 | None:intergenic | 40.0% | |
| GGACTTCATAATTTCCTCTC+TGG | + | chr7.4:73949339-73949358 | MS.gene86660:intron | 40.0% | |
| GGGACTATGAAAGAGTTGAA+AGG | + | chr7.4:73951760-73951779 | MS.gene86660:CDS | 40.0% | |
| GTTTCATTCGGTCAGAACAT+GGG | + | chr7.4:73952372-73952391 | MS.gene86660:intron | 40.0% | |
| TAACAGTATATAGGCCTGGT+TGG | - | chr7.4:73952351-73952370 | None:intergenic | 40.0% | |
| TAACTGAGTTTGAATCCAGG+TGG | + | chr7.4:73949569-73949588 | MS.gene86660:intron | 40.0% | |
| TATGAAAGAGTTGAAAGGGC+AGG | + | chr7.4:73951765-73951784 | MS.gene86660:CDS | 40.0% | |
| TCATCAAAGCGAATTGTTGG+AGG | + | chr7.4:73950875-73950894 | MS.gene86660:intron | 40.0% | |
| TGAAAACGCCACTGTTATTC+AGG | + | chr7.4:73949953-73949972 | MS.gene86660:CDS | 40.0% | |
| TGAGAGTGAAATAGAGAGAG+AGG | - | chr7.4:73953840-73953859 | None:intergenic | 40.0% | |
| TGTCTCAGACTGTACTGAAA+GGG | + | chr7.4:73951827-73951846 | MS.gene86660:CDS | 40.0% | |
| TTCCTCTCTTAACTATTGGC+AGG | + | chr7.4:73950443-73950462 | MS.gene86660:intron | 40.0% | |
| ! | AACGACTTGGATTCAAACTC+AGG | - | chr7.4:73949512-73949531 | None:intergenic | 40.0% |
| ! | ACCAAGGTTGGTTGAAACAA+GGG | + | chr7.4:73953886-73953905 | MS.gene86660:intron | 40.0% |
| ! | CTCTGATGGAGTTTGGTTTA+TGG | + | chr7.4:73950412-73950431 | MS.gene86660:CDS | 40.0% |
| ! | GATGGAGTTTGGTTTATGGA+TGG | + | chr7.4:73950416-73950435 | MS.gene86660:CDS | 40.0% |
| ! | TAATCTGGAATCCCGGATTT+CGG | - | chr7.4:73949808-73949827 | None:intergenic | 40.0% |
| ! | TTTTACGTCACCGATGTAAC+TGG | + | chr7.4:73953189-73953208 | MS.gene86660:CDS | 40.0% |
| ! | TTTTTGTTGCTCCATCTCTG+TGG | + | chr7.4:73950670-73950689 | MS.gene86660:intron | 40.0% |
| !! | AGTGCAGTTTTTGCTGTCTT+CGG | - | chr7.4:73951681-73951700 | None:intergenic | 40.0% |
| !! | CCTCTCTGGAATGATAATCT+GGG | + | chr7.4:73949353-73949372 | MS.gene86660:intron | 40.0% |
| !! | TCAATTAGGAGTACCTGAGT+TGG | + | chr7.4:73949749-73949768 | MS.gene86660:intron | 40.0% |
| !! | TCCTCTCTGGAATGATAATC+TGG | + | chr7.4:73949352-73949371 | MS.gene86660:intron | 40.0% |
| AAATCACCCTTCCACAGAGA+TGG | - | chr7.4:73950684-73950703 | None:intergenic | 45.0% | |
| AATCCCTTATTGTGGAGAGG+CGG | - | chr7.4:73951626-73951645 | None:intergenic | 45.0% | |
| ACCACTTAAACCGAACCACT+TGG | - | chr7.4:73949649-73949668 | None:intergenic | 45.0% | |
| ACGCCACTGTTATTCAGGTA+TGG | + | chr7.4:73949958-73949977 | MS.gene86660:intron | 45.0% | |
| ACGTCAATGAGAGAGTCTGT+TGG | + | chr7.4:73951402-73951421 | MS.gene86660:CDS | 45.0% | |
| AGATAGTAAACCAGGCCTGT+CGG | - | chr7.4:73951472-73951491 | None:intergenic | 45.0% | |
| AGATTGTGTGCATGAACCTG+CGG | + | chr7.4:73950986-73951005 | MS.gene86660:intron | 45.0% | |
| AGCGAGAATATACACAGGAG+AGG | - | chr7.4:73953406-73953425 | None:intergenic | 45.0% | |
| ATACACAGGAGAGGACGTTT+AGG | - | chr7.4:73953397-73953416 | None:intergenic | 45.0% | |
| ATCTTCTATGGCACAACCAC+TGG | - | chr7.4:73951598-73951617 | None:intergenic | 45.0% | |
| ATGGTGTGGTTCAGACAGAA+AGG | + | chr7.4:73951943-73951962 | MS.gene86660:CDS | 45.0% | |
| ATTTGCTTTGCAACGTCCTC+AGG | + | chr7.4:73951643-73951662 | MS.gene86660:CDS | 45.0% | |
| CACATCCTGGAGTTACGTAT+AGG | + | chr7.4:73951703-73951722 | MS.gene86660:CDS | 45.0% | |
| CACTTATCTGGTGCTTACAC+TGG | - | chr7.4:73952120-73952139 | None:intergenic | 45.0% | |
| CATGTAACCGATGATTCCAG+TGG | + | chr7.4:73951579-73951598 | MS.gene86660:CDS | 45.0% | |
| CCACCTCAAGGAACAACAAT+TGG | + | chr7.4:73953306-73953325 | MS.gene86660:intron | 45.0% | |
| CCCAGATTATCATTCCAGAG+AGG | - | chr7.4:73949356-73949375 | None:intergenic | 45.0% | |
| CGTCAATGAGAGAGTCTGTT+GGG | + | chr7.4:73951403-73951422 | MS.gene86660:CDS | 45.0% | |
| CTATCCCTATACGTAACTCC+AGG | - | chr7.4:73951711-73951730 | None:intergenic | 45.0% | |
| CTGTCTCAGACTGTACTGAA+AGG | + | chr7.4:73951826-73951845 | MS.gene86660:CDS | 45.0% | |
| CTTACCTTATGGCCGAAATC+CGG | + | chr7.4:73949793-73949812 | MS.gene86660:intron | 45.0% | |
| CTTTCACCAAAACCACCTCA+AGG | + | chr7.4:73953294-73953313 | MS.gene86660:intron | 45.0% | |
| CTTTCAGCCTCTGAGCTTAT+GGG | - | chr7.4:73952509-73952528 | None:intergenic | 45.0% | |
| GACTACTCTCGGATATCACA+AGG | + | chr7.4:73953094-73953113 | MS.gene86660:CDS | 45.0% | |
| GAGACAGTTACATGCGGAAA+TGG | - | chr7.4:73951813-73951832 | None:intergenic | 45.0% | |
| GAGTTTGAATCCAGGTGGTT+AGG | + | chr7.4:73949574-73949593 | MS.gene86660:intron | 45.0% | |
| GCAAATCCCTTATTGTGGAG+AGG | - | chr7.4:73951629-73951648 | None:intergenic | 45.0% | |
| GTCAATGAGAGAGTCTGTTG+GGG | + | chr7.4:73951404-73951423 | MS.gene86660:CDS | 45.0% | |
| GTTCGGCTCAAGTGGTTAAT+TGG | + | chr7.4:73949529-73949548 | MS.gene86660:intron | 45.0% | |
| TATCCGAGAGTAGTCCTACA+CGG | - | chr7.4:73953089-73953108 | None:intergenic | 45.0% | |
| TCAAAGCGAATTGTTGGAGG+GGG | + | chr7.4:73950878-73950897 | MS.gene86660:intron | 45.0% | |
| TCAGGAAGGAGCTACTAATC+TGG | - | chr7.4:73949823-73949842 | None:intergenic | 45.0% | |
| TCTTTCAGCCTCTGAGCTTA+TGG | - | chr7.4:73952510-73952529 | None:intergenic | 45.0% | |
| TGAGGAATATTGCTCGAGTG+CGG | + | chr7.4:73953931-73953950 | MS.gene86660:intron | 45.0% | |
| TGCCTGAGTTTGAATCCAAG+TGG | + | chr7.4:73949631-73949650 | MS.gene86660:intron | 45.0% | |
| TGCCTGCCAATAGTTAAGAG+AGG | - | chr7.4:73950448-73950467 | None:intergenic | 45.0% | |
| TGGTTCAGACAGAAAGGACA+GGG | + | chr7.4:73951949-73951968 | MS.gene86660:CDS | 45.0% | |
| TTACCTTATGGCCGAAATCC+GGG | + | chr7.4:73949794-73949813 | MS.gene86660:intron | 45.0% | |
| TTAGTAGCTCCTTCCTGAGT+TGG | + | chr7.4:73949825-73949844 | MS.gene86660:intron | 45.0% | |
| TTTGCTTTGCAACGTCCTCA+GGG | + | chr7.4:73951644-73951663 | MS.gene86660:CDS | 45.0% | |
| ! | AACTCGCTTCTTGCTATGCA+GGG | + | chr7.4:73949908-73949927 | MS.gene86660:intron | 45.0% |
| ! | ATTTTCCTCCCCTTAGCAAG+AGG | + | chr7.4:73953489-73953508 | MS.gene86660:intron | 45.0% |
| ! | CAGTCTGAGACAGTTACATG+CGG | - | chr7.4:73951819-73951838 | None:intergenic | 45.0% |
| ! | CCAAGGTTGGTTGAAACAAG+GGG | + | chr7.4:73953887-73953906 | MS.gene86660:intron | 45.0% |
| ! | CCAATTGTTGTTCCTTGAGG+TGG | - | chr7.4:73953309-73953328 | None:intergenic | 45.0% |
| ! | GACCAAGGTTGGTTGAAACA+AGG | + | chr7.4:73953885-73953904 | MS.gene86660:intron | 45.0% |
| ! | GAGCTACTAATCTGGAATCC+CGG | - | chr7.4:73949815-73949834 | None:intergenic | 45.0% |
| ! | GTTGTTCCTTGAGGTGGTTT+TGG | - | chr7.4:73953303-73953322 | None:intergenic | 45.0% |
| ! | TAACTCGCTTCTTGCTATGC+AGG | + | chr7.4:73949907-73949926 | MS.gene86660:intron | 45.0% |
| ! | TTTTCCTCCCCTTAGCAAGA+GGG | + | chr7.4:73953490-73953509 | MS.gene86660:intron | 45.0% |
| !! | GTTTTGGCGAAAGAAGACTC+AGG | + | chr7.4:73954016-73954035 | MS.gene86660:intron | 45.0% |
| !! | TCCAAGTGGTTCGGTTTAAG+TGG | + | chr7.4:73949645-73949664 | MS.gene86660:intron | 45.0% |
| !! | AAATAGATAAAATTATAAAA+AGG | + | chr7.4:73952823-73952842 | MS.gene86660:intron | 5.0% |
| !! | TATTTATATTATTATTGTTA+TGG | + | chr7.4:73949210-73949229 | MS.gene86660:intron | 5.0% |
| AATCCCGGATTTCGGCCATA+AGG | - | chr7.4:73949800-73949819 | None:intergenic | 50.0% | |
| ACCACTTAAGCCTAACCACC+TGG | - | chr7.4:73949587-73949606 | None:intergenic | 50.0% | |
| ACCACTTGAGCCGAATCACT+TGG | - | chr7.4:73949463-73949482 | None:intergenic | 50.0% | |
| ACGTGGTTACCGCTGAGATT+TGG | + | chr7.4:73951526-73951545 | MS.gene86660:CDS | 50.0% | |
| ACTCCATACCTCGCTCTTTC+AGG | + | chr7.4:73952611-73952630 | MS.gene86660:intron | 50.0% | |
| AGAAAGGACAGGGGCTTATC+AGG | + | chr7.4:73951959-73951978 | MS.gene86660:CDS | 50.0% | |
| AGACCGTGTAGGACTACTCT+CGG | + | chr7.4:73953083-73953102 | MS.gene86660:CDS | 50.0% | |
| AGAGTGGAGCAGTGTTCACA+TGG | + | chr7.4:73954122-73954141 | MS.gene86660:CDS | 50.0% | |
| ATCCCTTATTGTGGAGAGGC+GGG | - | chr7.4:73951625-73951644 | None:intergenic | 50.0% | |
| ATGAACCTGCGGGATTCATC+TGG | + | chr7.4:73950997-73951016 | MS.gene86660:intron | 50.0% | |
| ATGGAATGAGGCTGCTAGAG+TGG | + | chr7.4:73954106-73954125 | MS.gene86660:CDS | 50.0% | |
| ATTCCAAGCCCCTCTTGCTA+AGG | - | chr7.4:73953502-73953521 | None:intergenic | 50.0% | |
| CAAAGCGAATTGTTGGAGGG+GGG | + | chr7.4:73950879-73950898 | MS.gene86660:intron | 50.0% | |
| CATTCGGTCAGAACATGGGT+TGG | + | chr7.4:73952376-73952395 | MS.gene86660:intron | 50.0% | |
| GAGGAATATTGCTCGAGTGC+GGG | + | chr7.4:73953932-73953951 | MS.gene86660:intron | 50.0% | |
| GATTGTGTGCATGAACCTGC+GGG | + | chr7.4:73950987-73951006 | MS.gene86660:intron | 50.0% | |
| GCAGAGATGTTGACCTGATC+TGG | + | chr7.4:73951227-73951246 | MS.gene86660:intron | 50.0% | |
| GGCACAACCACTGGAATCAT+CGG | - | chr7.4:73951589-73951608 | None:intergenic | 50.0% | |
| GGTTCAGACAGAAAGGACAG+GGG | + | chr7.4:73951950-73951969 | MS.gene86660:CDS | 50.0% | |
| GTCTTGAAGCGGCAATTGAG+AGG | + | chr7.4:73952546-73952565 | MS.gene86660:CDS | 50.0% | |
| GTGGTTCAGACAGAAAGGAC+AGG | + | chr7.4:73951948-73951967 | MS.gene86660:CDS | 50.0% | |
| GTTGCTCCATCTCTGTGGAA+GGG | + | chr7.4:73950675-73950694 | MS.gene86660:intron | 50.0% | |
| TCCAGGTGGTTAGGCTTAAG+TGG | + | chr7.4:73949583-73949602 | MS.gene86660:intron | 50.0% | |
| TGAGCTGCGTACATGGAATG+AGG | + | chr7.4:73954094-73954113 | MS.gene86660:CDS | 50.0% | |
| TGGCTTTCCCATAAGCTCAG+AGG | + | chr7.4:73952499-73952518 | MS.gene86660:CDS | 50.0% | |
| TGTTGCTCCATCTCTGTGGA+AGG | + | chr7.4:73950674-73950693 | MS.gene86660:intron | 50.0% | |
| TTATATGCAGGGGATGGAGC+TGG | + | chr7.4:73953047-73953066 | MS.gene86660:intron | 50.0% | |
| TTCCAAGCCCCTCTTGCTAA+GGG | - | chr7.4:73953501-73953520 | None:intergenic | 50.0% | |
| TTGAAGCGGCAATTGAGAGG+CGG | + | chr7.4:73952549-73952568 | MS.gene86660:CDS | 50.0% | |
| TTGCTTTGCAACGTCCTCAG+GGG | + | chr7.4:73951645-73951664 | MS.gene86660:CDS | 50.0% | |
| TTGTGCACAGAAGACCGTGT+AGG | + | chr7.4:73953072-73953091 | MS.gene86660:CDS | 50.0% | |
| TTTCCTCCCCTTAGCAAGAG+GGG | + | chr7.4:73953491-73953510 | MS.gene86660:intron | 50.0% | |
| ! | ACCAAGTGATTCGGCTCAAG+TGG | + | chr7.4:73949459-73949478 | MS.gene86660:intron | 50.0% |
| ! | CCCCTTGTTTCAACCAACCT+TGG | - | chr7.4:73953890-73953909 | None:intergenic | 50.0% |
| ! | TAGCTCCTTCCTGAGTTGGA+GGG | + | chr7.4:73949829-73949848 | MS.gene86660:intron | 50.0% |
| !! | GGGTTGGTCTGCTTCAGTTT+GGG | + | chr7.4:73952392-73952411 | MS.gene86660:intron | 50.0% |
| !! | TGGGTTGGTCTGCTTCAGTT+TGG | + | chr7.4:73952391-73952410 | MS.gene86660:intron | 50.0% |
| !! | TTGAACTTACTGGCACCGAC+AGG | + | chr7.4:73951454-73951473 | MS.gene86660:CDS | 50.0% |
| AATTGAGAGGCGGGCATCTG+AGG | + | chr7.4:73952559-73952578 | MS.gene86660:CDS | 55.0% | |
| ACCACTTGAGCCGAACCACT+TGG | - | chr7.4:73949711-73949730 | None:intergenic | 55.0% | |
| ACCACTTGAGCCGAACGACT+TGG | - | chr7.4:73949525-73949544 | None:intergenic | 55.0% | |
| CCTAACCCTCCAACTCAGGA+AGG | - | chr7.4:73949837-73949856 | None:intergenic | 55.0% | |
| CGAGGTATGGAGTTTCCAGC+AGG | - | chr7.4:73952604-73952623 | None:intergenic | 55.0% | |
| CTTAACGGCCTGAAAGAGCG+AGG | - | chr7.4:73952622-73952641 | None:intergenic | 55.0% | |
| CTTATTGTGGAGAGGCGGGA+CGG | - | chr7.4:73951621-73951640 | None:intergenic | 55.0% | |
| GCAGCTCAACCAGCATTCGA+AGG | - | chr7.4:73954082-73954101 | None:intergenic | 55.0% | |
| GTCCCGCCTCTCCACAATAA+GGG | + | chr7.4:73951620-73951639 | MS.gene86660:CDS | 55.0% | |
| TACGGACACCGAACACGACA+CGG | - | chr7.4:73950241-73950260 | None:intergenic | 55.0% | |
| TCCAAGCCCCTCTTGCTAAG+GGG | - | chr7.4:73953500-73953519 | None:intergenic | 55.0% | |
| TCCAAGTCGTTCGGCTCAAG+TGG | + | chr7.4:73949521-73949540 | MS.gene86660:intron | 55.0% | |
| TGAAGCGGCAATTGAGAGGC+GGG | + | chr7.4:73952550-73952569 | MS.gene86660:CDS | 55.0% | |
| TGCTTTGCAACGTCCTCAGG+GGG | + | chr7.4:73951646-73951665 | MS.gene86660:CDS | 55.0% | |
| TGGTCCTAACCCTCCAACTC+AGG | - | chr7.4:73949841-73949860 | None:intergenic | 55.0% | |
| ! | CCTTCCTGAGTTGGAGGGTT+AGG | + | chr7.4:73949834-73949853 | MS.gene86660:intron | 55.0% |
| ! | GTAGCTCCTTCCTGAGTTGG+AGG | + | chr7.4:73949828-73949847 | MS.gene86660:intron | 55.0% |
| ! | TCCAAGTGGTTCGGCTCAAG+TGG | + | chr7.4:73949707-73949726 | MS.gene86660:intron | 55.0% |
| ! | TGCTGGTTGAGCTGCGTACA+TGG | + | chr7.4:73954087-73954106 | MS.gene86660:CDS | 55.0% |
| !! | TGTCGGTGTCGTGACGTTGT+CGG | - | chr7.4:73950162-73950181 | None:intergenic | 55.0% |
| AAGCCCCTCTTGCTAAGGGG+AGG | - | chr7.4:73953497-73953516 | None:intergenic | 60.0% | |
| CCGTAGACAGATCGGCGACA+CGG | + | chr7.4:73953245-73953264 | MS.gene86660:CDS | 60.0% | |
| CCGTGTCGCCGATCTGTCTA+CGG | - | chr7.4:73953248-73953267 | None:intergenic | 60.0% | |
| CGGCCTGAAAGAGCGAGGTA+TGG | - | chr7.4:73952617-73952636 | None:intergenic | 60.0% | |
| CGGTAACCACGTTGCAGCGA+AGG | - | chr7.4:73951518-73951537 | None:intergenic | 60.0% | |
| CGTCCCGCCTCTCCACAATA+AGG | + | chr7.4:73951619-73951638 | MS.gene86660:CDS | 60.0% | |
| GAGGCGGGACGGATCTTCTA+TGG | - | chr7.4:73951610-73951629 | None:intergenic | 60.0% | |
| GCAGACCAGATGAATCCCGC+AGG | - | chr7.4:73951005-73951024 | None:intergenic | 60.0% | |
| TCCCCTTAGCAAGAGGGGCT+TGG | + | chr7.4:73953496-73953515 | MS.gene86660:intron | 60.0% | |
| TCGGATCATCACTCCCCCTG+AGG | - | chr7.4:73951662-73951681 | None:intergenic | 60.0% | |
| CGCAGACCTTCGCTGCAACG+TGG | + | chr7.4:73951509-73951528 | MS.gene86660:CDS | 65.0% | |
| CGGCGTGTCCGTGTCGTGTT+CGG | + | chr7.4:73950230-73950249 | MS.gene86660:intron | 65.0% | |
| GATCGGCGACACGGTACTGC+AGG | + | chr7.4:73953254-73953273 | MS.gene86660:CDS | 65.0% | |
| !! | CTTACTGGCACCGACAGGCC+TGG | + | chr7.4:73951459-73951478 | MS.gene86660:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 73949139 | 73954154 | 73949139 | ID=MS.gene86660 |
| chr7.4 | mRNA | 73949139 | 73954154 | 73949139 | ID=MS.gene86660.t1;Parent=MS.gene86660 |
| chr7.4 | exon | 73949139 | 73949152 | 73949139 | ID=MS.gene86660.t1.exon1;Parent=MS.gene86660.t1 |
| chr7.4 | CDS | 73949139 | 73949152 | 73949139 | ID=cds.MS.gene86660.t1;Parent=MS.gene86660.t1 |
| chr7.4 | exon | 73949929 | 73949974 | 73949929 | ID=MS.gene86660.t1.exon2;Parent=MS.gene86660.t1 |
| chr7.4 | CDS | 73949929 | 73949974 | 73949929 | ID=cds.MS.gene86660.t1;Parent=MS.gene86660.t1 |
| chr7.4 | exon | 73950323 | 73950437 | 73950323 | ID=MS.gene86660.t1.exon3;Parent=MS.gene86660.t1 |
| chr7.4 | CDS | 73950323 | 73950437 | 73950323 | ID=cds.MS.gene86660.t1;Parent=MS.gene86660.t1 |
| chr7.4 | exon | 73950553 | 73950620 | 73950553 | ID=MS.gene86660.t1.exon4;Parent=MS.gene86660.t1 |
| chr7.4 | CDS | 73950553 | 73950620 | 73950553 | ID=cds.MS.gene86660.t1;Parent=MS.gene86660.t1 |
| chr7.4 | exon | 73951375 | 73951980 | 73951375 | ID=MS.gene86660.t1.exon5;Parent=MS.gene86660.t1 |
| chr7.4 | CDS | 73951375 | 73951980 | 73951375 | ID=cds.MS.gene86660.t1;Parent=MS.gene86660.t1 |
| chr7.4 | exon | 73952476 | 73952580 | 73952476 | ID=MS.gene86660.t1.exon6;Parent=MS.gene86660.t1 |
| chr7.4 | CDS | 73952476 | 73952580 | 73952476 | ID=cds.MS.gene86660.t1;Parent=MS.gene86660.t1 |
| chr7.4 | exon | 73953057 | 73953275 | 73953057 | ID=MS.gene86660.t1.exon7;Parent=MS.gene86660.t1 |
| chr7.4 | CDS | 73953057 | 73953275 | 73953057 | ID=cds.MS.gene86660.t1;Parent=MS.gene86660.t1 |
| chr7.4 | exon | 73954029 | 73954154 | 73954029 | ID=MS.gene86660.t1.exon8;Parent=MS.gene86660.t1 |
| chr7.4 | CDS | 73954029 | 73954154 | 73954029 | ID=cds.MS.gene86660.t1;Parent=MS.gene86660.t1 |
| Gene Sequence |
| Protein sequence |
