AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene87318

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene87318.t1 MTR_8g079840 98.325 597 10 0 17 613 1 597 0.0 1209
MS.gene87318.t1 MTR_8g079840 98.394 498 8 0 17 514 1 498 0.0 1005
MS.gene87318.t1 MTR_5g017790 67.330 603 134 9 17 613 1 546 0.0 737
MS.gene87318.t1 MTR_5g017790 68.197 588 127 8 32 613 1 534 0.0 731
MS.gene87318.t1 MTR_5g017790 63.793 464 105 9 17 474 1 407 6.53e-172 495
MS.gene87318.t1 MTR_1g021040 50.174 574 249 7 39 611 8 545 8.26e-162 474
MS.gene87318.t1 MTR_3g101340 48.877 579 226 14 39 611 23 537 3.96e-158 464
MS.gene87318.t1 MTR_3g101340 48.522 575 235 12 39 611 48 563 1.28e-157 464
MS.gene87318.t1 MTR_3g101340 48.211 587 226 14 39 611 48 570 1.31e-156 462
MS.gene87318.t1 MTR_4g058015 33.223 605 330 18 49 611 117 689 1.62e-80 268
MS.gene87318.t1 MTR_5g079910 38.806 335 179 5 300 611 178 509 1.07e-72 243
MS.gene87318.t1 MTR_8g078760 26.531 588 370 11 53 611 66 620 1.36e-45 171
MS.gene87318.t1 MTR_5g018820 28.523 589 341 16 56 611 77 618 8.56e-44 166
MS.gene87318.t1 MTR_5g012790 26.202 416 270 9 218 611 183 583 3.96e-42 160
MS.gene87318.t1 MTR_4g068920 29.944 354 216 8 280 611 285 628 1.64e-35 142
MS.gene87318.t1 MTR_8g078760 24.544 493 315 10 53 516 66 530 1.26e-25 111
MS.gene87318.t1 MTR_5g079910 33.333 174 95 3 300 452 178 351 1.95e-22 99.8
MS.gene87318.t1 MTR_3g073590 32.821 195 116 6 374 561 573 759 8.10e-19 91.3
MS.gene87318.t1 MTR_5g061340 28.293 205 138 5 374 574 746 945 9.84e-16 81.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene87318.t1 AT4G37080 59.464 634 196 12 17 613 1 610 0.0 657
MS.gene87318.t1 AT4G37080 59.464 634 196 12 17 613 1 610 0.0 657
MS.gene87318.t1 AT4G37080 61.184 608 189 11 29 613 14 597 0.0 655
MS.gene87318.t1 AT4G37080 59.136 509 161 11 29 514 27 511 1.72e-170 495
MS.gene87318.t1 AT5G42690 48.893 587 216 13 32 611 2 511 9.92e-154 452
MS.gene87318.t1 AT5G42690 48.480 592 224 12 23 611 25 538 3.55e-153 452
MS.gene87318.t1 AT5G42690 48.480 592 224 12 23 611 25 538 3.55e-153 452
MS.gene87318.t1 AT5G42690 48.649 592 222 13 23 611 25 537 3.48e-152 449
MS.gene87318.t1 AT5G42690 49.013 557 204 11 58 611 7 486 5.79e-147 434
MS.gene87318.t1 AT2G39690 40.000 330 171 7 300 611 96 416 1.74e-74 244
MS.gene87318.t1 AT2G39690 40.000 330 171 7 300 611 203 523 1.09e-73 245
MS.gene87318.t1 AT2G39690 40.000 330 171 7 300 611 177 497 1.18e-73 244
MS.gene87318.t1 AT2G39690 40.426 329 170 8 300 611 177 496 1.33e-73 244
MS.gene87318.t1 AT2G39690 40.426 329 170 8 300 611 203 522 1.45e-73 245
MS.gene87318.t1 AT3G12540 37.097 372 212 6 253 611 141 503 1.49e-69 234
MS.gene87318.t1 AT3G12540 37.097 372 212 6 253 611 208 570 2.77e-69 235
MS.gene87318.t1 AT5G60720 29.748 595 314 19 94 611 122 689 8.59e-60 212
MS.gene87318.t1 AT1G16750 32.676 355 190 9 301 611 178 527 5.66e-47 173
MS.gene87318.t1 AT3G13000 32.676 355 190 10 300 611 226 574 2.40e-44 167
MS.gene87318.t1 AT3G13000 32.676 355 190 10 300 611 226 574 2.40e-44 167
MS.gene87318.t1 AT3G13000 32.676 355 190 10 300 611 197 545 2.50e-44 166
MS.gene87318.t1 AT2G39690 39.827 231 114 6 300 514 203 424 6.75e-43 160
MS.gene87318.t1 AT2G39690 40.435 230 113 7 300 514 203 423 7.53e-43 160
MS.gene87318.t1 AT5G47380 27.189 434 255 12 205 611 131 530 3.77e-40 154
MS.gene87318.t1 AT5G47380 29.179 329 204 8 296 611 274 586 3.85e-40 155
MS.gene87318.t1 AT5G47380 29.179 329 204 8 296 611 274 586 4.61e-40 155
MS.gene87318.t1 AT3G18900 32.416 327 189 6 293 611 147 449 8.87e-36 140
MS.gene87318.t1 AT3G18900 32.416 327 189 6 293 611 147 449 8.87e-36 140
MS.gene87318.t1 AT3G18900 32.416 327 189 6 293 611 223 525 1.05e-35 141
MS.gene87318.t1 AT3G18900 32.416 327 189 6 293 611 228 530 1.10e-35 141
MS.gene87318.t1 AT5G66600 29.204 339 209 6 296 611 258 588 1.23e-35 142
MS.gene87318.t1 AT5G66600 29.204 339 209 6 296 611 278 608 1.41e-35 142
MS.gene87318.t1 AT5G66600 29.204 339 209 6 296 611 278 608 1.41e-35 142
MS.gene87318.t1 AT5G66600 29.204 339 209 6 296 611 278 608 1.41e-35 142
MS.gene87318.t1 AT5G66600 29.204 339 209 6 296 611 278 608 1.41e-35 142
MS.gene87318.t1 AT5G66600 29.204 339 209 6 296 611 278 608 1.41e-35 142
MS.gene87318.t1 AT5G66600 29.204 339 209 6 296 611 224 554 1.96e-35 141
MS.gene87318.t1 AT2G39690 38.462 182 97 4 300 469 177 355 1.49e-32 129
MS.gene87318.t1 AT1G76620 27.515 338 205 8 300 611 193 516 3.59e-32 131
MS.gene87318.t1 AT1G43020 30.909 220 132 4 388 601 211 416 1.59e-26 113
MS.gene87318.t1 AT1G21060 27.356 329 206 7 298 613 185 493 3.05e-26 113
MS.gene87318.t1 AT1G21060 27.052 329 207 6 298 613 197 505 3.60e-26 113
MS.gene87318.t1 AT5G47380 27.139 339 187 11 205 517 187 491 1.55e-22 102
MS.gene87318.t1 AT1G16750 31.553 206 105 5 301 471 178 382 2.35e-22 100
MS.gene87318.t1 AT5G47380 30.131 229 132 7 296 512 274 486 5.52e-22 100
MS.gene87318.t1 AT5G66600 29.752 242 142 4 296 514 278 514 5.83e-22 100
MS.gene87318.t1 AT5G66600 29.752 242 142 4 296 514 278 514 5.83e-22 100
MS.gene87318.t1 AT5G66600 29.752 242 142 4 296 514 278 514 5.83e-22 100
MS.gene87318.t1 AT5G66600 29.752 242 142 4 296 514 278 514 5.83e-22 100
MS.gene87318.t1 AT4G08550 28.151 238 157 6 374 607 408 635 1.57e-18 90.1
MS.gene87318.t1 AT4G08550 28.151 238 157 6 374 607 462 689 1.75e-18 90.1
MS.gene87318.t1 AT3G18900 31.169 231 128 6 293 514 228 436 1.21e-17 86.7
MS.gene87318.t1 AT5G66600 28.877 187 115 2 296 466 278 462 3.61e-16 82.0
MS.gene87318.t1 AT5G66600 28.877 187 115 2 296 466 278 462 3.61e-16 82.0
MS.gene87318.t1 AT5G66600 28.877 187 115 2 296 466 278 462 3.61e-16 82.0
MS.gene87318.t1 AT5G66600 28.877 187 115 2 296 466 224 408 4.28e-16 81.6
MS.gene87318.t1 AT3G11920 32.164 171 112 3 402 570 426 594 2.40e-15 80.1
MS.gene87318.t1 AT3G18900 33.146 178 93 5 293 466 228 383 7.23e-15 77.4
MS.gene87318.t1 AT1G76620 24.896 241 145 7 300 514 193 423 3.43e-13 72.4
MS.gene87318.t1 AT1G43020 32.353 136 83 4 388 517 211 343 4.27e-13 71.6

Find 100 sgRNAs with CRISPR-Local

Find 246 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTTATTTCATCAGGTAAT+TGG 0.190698 8.3:-24528303 None:intergenic
ACAACCATTTCCGGACTTTC+AGG 0.201826 8.3:-24526838 None:intergenic
TTGAGTGGAGATTTCTTTAA+AGG 0.208758 8.3:-24525393 None:intergenic
GTGAAAGCAAGAAGCATATT+TGG 0.230491 8.3:+24527227 MS.gene87318:CDS
AATTACTTCTCATGTGGTTT+TGG 0.235218 8.3:-24525086 None:intergenic
AAAGGACCTTGATTCTTTAT+TGG 0.238431 8.3:+24528267 MS.gene87318:CDS
AGATCTTCTGAAACTCTATT+TGG 0.238770 8.3:-24525830 None:intergenic
TGGACCAACTTCTCTTGTTT+TGG 0.239386 8.3:-24526005 None:intergenic
AAGAATTTATGTGAAATTAA+AGG 0.244278 8.3:+24526031 MS.gene87318:CDS
ATTTCACATAAATTCTTATA+TGG 0.245460 8.3:-24526025 None:intergenic
GATACTAATTCCCAAGCTAT+TGG 0.317282 8.3:+24528222 MS.gene87318:CDS
AAACATTGCATTTGTTGTTC+TGG 0.321552 8.3:-24526071 None:intergenic
ATTAATGCTACAACCATTTC+CGG 0.323435 8.3:-24526847 None:intergenic
CTTTCTGCTAGAAGCACTTC+TGG 0.331481 8.3:-24525190 None:intergenic
TCTAACATATTTGTGAGAAT+TGG 0.347512 8.3:+24525866 MS.gene87318:CDS
AAGAGCATTTACAAGACCTT+TGG 0.361369 8.3:+24524483 MS.gene87318:CDS
CATGGATCAATTAAAGTTGC+AGG 0.385031 8.3:+24525437 MS.gene87318:CDS
GCTTGGTTTCTTATTTCATC+AGG 0.387730 8.3:-24528310 None:intergenic
CTTCAAGGCATTTAACTGCT+TGG 0.390658 8.3:-24528327 None:intergenic
AGAGCATTTACAAGACCTTT+GGG 0.393492 8.3:+24524484 MS.gene87318:CDS
ACTTGCTTCTTTGAACTTGA+AGG 0.397570 8.3:+24526371 MS.gene87318:CDS
ATAATCACAGTGGGAGTAAT+GGG 0.397780 8.3:+24525238 MS.gene87318:CDS
ATTCACGTTCCCTTCCTTCA+AGG 0.419066 8.3:-24528342 None:intergenic
ATTATCTGTAGGTGAATTTG+AGG 0.419838 8.3:-24525783 None:intergenic
CAAGCAGTTAAATGCCTTGA+AGG 0.420884 8.3:+24528328 MS.gene87318:CDS
ACCTTGATTCTTTATTGGAC+TGG 0.422533 8.3:+24528272 MS.gene87318:CDS
GATTATTTACAAGCTACAAT+TGG 0.427422 8.3:+24528181 MS.gene87318:CDS
GTAAAATTCAGGTACCTACT+TGG 0.431528 8.3:+24526345 MS.gene87318:intron
ATTGTGGACTTACAAACTTA+AGG 0.436584 8.3:-24527086 None:intergenic
ATGTGGAAAGCAGGAGAAGA+TGG 0.444562 8.3:+24524242 MS.gene87318:intron
GGAAAGTGCAAATGTTACTA+AGG 0.447874 8.3:-24527267 None:intergenic
ACTTACAAACTTAAGGTGAT+AGG 0.449376 8.3:-24527079 None:intergenic
TAAATACCAATCCAATAGCT+TGG 0.450394 8.3:-24528233 None:intergenic
GATTCTGAACAGATATCATA+AGG 0.452530 8.3:-24525983 None:intergenic
CTTACAAACTTAAGGTGATA+GGG 0.461257 8.3:-24527078 None:intergenic
CAGGAGAAGATGGAAGGAGG+AGG 0.462824 8.3:+24524252 MS.gene87318:intron
CTGTGATTATTGACAGTGTC+AGG 0.464530 8.3:-24525225 None:intergenic
CATACCTGAAAGTCCGGAAA+TGG 0.466334 8.3:+24526834 MS.gene87318:CDS
CTTGCTTCTTTGAACTTGAA+GGG 0.468499 8.3:+24526372 MS.gene87318:CDS
CTGCAACTTTAATTGATCCA+TGG 0.472815 8.3:-24525436 None:intergenic
AACCTGAAACTAAAATCATA+AGG 0.475747 8.3:-24528391 None:intergenic
TTTGGTTGCCTTAGCTGGAA+TGG 0.476109 8.3:+24525729 MS.gene87318:intron
AAATACCAATCCAATAGCTT+GGG 0.481611 8.3:-24528232 None:intergenic
ATGGAAGGAGGAGGGAGCAA+AGG 0.484168 8.3:+24524261 MS.gene87318:CDS
CTAACATATGGAGGAAGATA+AGG 0.489236 8.3:-24524526 None:intergenic
GAATCCAAAACAAGAGAAGT+TGG 0.490044 8.3:+24526001 MS.gene87318:CDS
TCTAGCTGAGGTGGCAGTGT+TGG 0.492182 8.3:+24524948 MS.gene87318:CDS
TTCTGGCAAGAGAATTCTGT+GGG 0.492226 8.3:-24525173 None:intergenic
TTTCAGGCAACAATAGTAGT+AGG 0.492409 8.3:+24527006 MS.gene87318:intron
CAGTTAAATGCCTTGAAGGA+AGG 0.493380 8.3:+24528332 MS.gene87318:CDS
TTGCACTTTCCTGTGGAAGT+TGG 0.498705 8.3:+24527279 MS.gene87318:CDS
GGTTGTAGCATTAATGCAAA+AGG 0.498874 8.3:+24526855 MS.gene87318:CDS
AAATAAGACCCAGAAGTTGA+AGG 0.499068 8.3:-24525923 None:intergenic
AGCAAGAAGCATATTTGGAC+TGG 0.499364 8.3:+24527232 MS.gene87318:CDS
ACATGGCATACCTGAAAGTC+CGG 0.506804 8.3:+24526828 MS.gene87318:CDS
GGCAGTGTTGGAAGAAGAAG+TGG 0.508158 8.3:+24524960 MS.gene87318:CDS
TGTTGGAAGAAGAAGTGGTT+AGG 0.511515 8.3:+24524965 MS.gene87318:CDS
AATAATCACAGTGGGAGTAA+TGG 0.514820 8.3:+24525237 MS.gene87318:CDS
GGAGATTATCAGAACATGAA+AGG 0.515426 8.3:+24525750 MS.gene87318:CDS
CATCTATACAAGAAGAAGGA+AGG 0.518813 8.3:+24525292 MS.gene87318:CDS
GAGATTATCAGAACATGAAA+GGG 0.519637 8.3:+24525751 MS.gene87318:CDS
AGTTAAATGCCTTGAAGGAA+GGG 0.523554 8.3:+24528333 MS.gene87318:CDS
TCCAGTCCAATAAAGAATCA+AGG 0.524058 8.3:-24528273 None:intergenic
ACGTGAATCTCTTTCAAAGT+TGG 0.524850 8.3:+24528357 MS.gene87318:CDS
ATCTATACAAGAAGAAGGAA+GGG 0.524855 8.3:+24525293 MS.gene87318:CDS
TTCAGGTAGATAAGTTGAAG+AGG 0.528029 8.3:+24524422 MS.gene87318:intron
TAATTCCCAAGCTATTGGAT+TGG 0.534838 8.3:+24528227 MS.gene87318:CDS
GGAAAGCAGGAGAAGATGGA+AGG 0.544627 8.3:+24524246 MS.gene87318:intron
GACATTGGAACTTCTAGCTG+AGG 0.548247 8.3:+24524936 MS.gene87318:intron
GCTTTGAATTACTTCTCATG+TGG 0.555149 8.3:-24525092 None:intergenic
AAGCAGGAGAAGATGGAAGG+AGG 0.556298 8.3:+24524249 MS.gene87318:intron
TCTGACACTTTATTATCTGT+AGG 0.556361 8.3:-24525794 None:intergenic
TGAGCTGATTCATGTTTGAG+TGG 0.563105 8.3:-24525408 None:intergenic
TTCTCATCTATACAAGAAGA+AGG 0.568329 8.3:+24525288 MS.gene87318:CDS
TGTGAGAATTGGTACATCCA+AGG 0.569116 8.3:+24525877 MS.gene87318:CDS
CAAGTTGTGAATTTCAGACA+AGG 0.573745 8.3:+24524997 MS.gene87318:CDS
TCTATACAAGAAGAAGGAAG+GGG 0.575452 8.3:+24525294 MS.gene87318:CDS
GGAAGATAAGGCGGAAGACG+AGG 0.581353 8.3:-24524514 None:intergenic
GTAACATTTGCACTTTCCTG+TGG 0.584614 8.3:+24527272 MS.gene87318:CDS
GAAGCATATTTGGACTGGAA+TGG 0.585611 8.3:+24527237 MS.gene87318:CDS
TGAATCAGCTCAGAAGTCCA+TGG 0.591207 8.3:+24525419 MS.gene87318:CDS
GAAAGTGCAAATGTTACTAA+GGG 0.594562 8.3:-24527266 None:intergenic
AGGAGAAGATGGAAGGAGGA+GGG 0.595319 8.3:+24524253 MS.gene87318:intron
TGTTCTGGTGAGATCAACAT+TGG 0.595419 8.3:-24526056 None:intergenic
AGGTGAAGACCAACTTCCAC+AGG 0.609752 8.3:-24527288 None:intergenic
ATTGGAACTTCTAGCTGAGG+TGG 0.610303 8.3:+24524939 MS.gene87318:CDS
TTACAAACTTAAGGTGATAG+GGG 0.614980 8.3:-24527077 None:intergenic
CTATAACTTACTTCAATCTG+TGG 0.615670 8.3:-24526099 None:intergenic
TTATTTCAGCCAATGTAGCA+AGG 0.617147 8.3:+24525940 MS.gene87318:CDS
AGAGAGAGACTAACATATGG+AGG 0.635286 8.3:-24524535 None:intergenic
AATTTAATTCAATGACAACA+AGG 0.640125 8.3:+24525145 MS.gene87318:CDS
TGGTAGGCATACTTAGAACA+TGG 0.651116 8.3:+24526811 MS.gene87318:intron
CTGGCAAGAGAATTCTGTGG+GGG 0.652309 8.3:-24525171 None:intergenic
CAGGCAACAATAGTAGTAGG+AGG 0.658457 8.3:+24527009 MS.gene87318:intron
ACACTGTCAATAATCACAGT+GGG 0.661419 8.3:+24525229 MS.gene87318:CDS
CTTCTGGCAAGAGAATTCTG+TGG 0.665327 8.3:-24525174 None:intergenic
ACATATGGAGGAAGATAAGG+CGG 0.675886 8.3:-24524523 None:intergenic
AGACGAGGCAAAGATCCCAA+AGG 0.692046 8.3:-24524499 None:intergenic
GACACTGTCAATAATCACAG+TGG 0.728310 8.3:+24525228 MS.gene87318:CDS
TCTGGCAAGAGAATTCTGTG+GGG 0.746852 8.3:-24525172 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTGTTTTGATTTAATTA+AGG + chr8.3:24528105-24528124 MS.gene87318:intron 10.0%
!! AAGAATTTATGTGAAATTAA+AGG + chr8.3:24526031-24526050 MS.gene87318:CDS 15.0%
!! AGAAATAAAGATAGAAATTA+AGG - chr8.3:24527169-24527188 None:intergenic 15.0%
!! ATTTCACATAAATTCTTATA+TGG - chr8.3:24526028-24526047 None:intergenic 15.0%
!! GAAATAAAGATAGAAATTAA+GGG - chr8.3:24527168-24527187 None:intergenic 15.0%
!! TCAATTTATCAAATTATTAC+CGG - chr8.3:24526196-24526215 None:intergenic 15.0%
!!! AAATTAAATTTAGAGTGAAT+AGG - chr8.3:24527901-24527920 None:intergenic 15.0%
!!! TTTGTTTAATCTTTTTGTTT+TGG + chr8.3:24525711-24525730 MS.gene87318:intron 15.0%
!!! TTTTAATATTTCTATGTTGT+TGG + chr8.3:24523862-24523881 MS.gene87318:intron 15.0%
!!! TTTTCTTTTACTTAAATCAA+TGG + chr8.3:24527347-24527366 MS.gene87318:intron 15.0%
!! AATTTAATTCAATGACAACA+AGG + chr8.3:24525145-24525164 MS.gene87318:CDS 20.0%
!! AATTTAGTGTAATTATGTGT+TGG + chr8.3:24525582-24525601 MS.gene87318:intron 20.0%
!! CGAAGAATTTAGTATATATT+TGG + chr8.3:24524566-24524585 MS.gene87318:intron 20.0%
!!! AAAGAACAAGATTTTAGATT+TGG - chr8.3:24524117-24524136 None:intergenic 20.0%
!!! AAATATAGCTTTTATCTATG+TGG + chr8.3:24524770-24524789 MS.gene87318:intron 20.0%
!!! ACAGTACTCTTTTTTTTTTT+TGG + chr8.3:24527381-24527400 MS.gene87318:intron 20.0%
!!! ACTTTTGGTATAATTATGTT+TGG + chr8.3:24527584-24527603 MS.gene87318:intron 20.0%
!!! TAATCTTTTGTGTAAAATTC+AGG + chr8.3:24526334-24526353 MS.gene87318:intron 20.0%
!!! TGATTTTCTCAAATTATTAG+CGG - chr8.3:24525559-24525578 None:intergenic 20.0%
!!! TTGTTTTTGAAGTTGATTTT+TGG + chr8.3:24524881-24524900 MS.gene87318:intron 20.0%
!!! TTTTAGCTTCAATAAAATCA+CGG - chr8.3:24524751-24524770 None:intergenic 20.0%
!!! TTTTGATTTAATTAAGGTGA+GGG + chr8.3:24528111-24528130 MS.gene87318:intron 20.0%
! AACACATCAAGATAAAATTG+TGG - chr8.3:24527105-24527124 None:intergenic 25.0%
! AACCTGAAACTAAAATCATA+AGG - chr8.3:24528394-24528413 None:intergenic 25.0%
! AATAAATGTGGATTTGTGTT+AGG - chr8.3:24528032-24528051 None:intergenic 25.0%
! AATTAACTGAATGGTCATAA+AGG + chr8.3:24526669-24526688 MS.gene87318:intron 25.0%
! AGTTTAGCTATTAGAAAACA+TGG - chr8.3:24527759-24527778 None:intergenic 25.0%
! ATTGACCTATTACAATTTCA+GGG - chr8.3:24527461-24527480 None:intergenic 25.0%
! CTTAAATTAAATTGCACTGA+AGG + chr8.3:24528076-24528095 MS.gene87318:intron 25.0%
! GATTATTTACAAGCTACAAT+TGG + chr8.3:24528181-24528200 MS.gene87318:CDS 25.0%
! GCATCAATAAAATTCAATGA+TGG + chr8.3:24527834-24527853 MS.gene87318:intron 25.0%
! TATGTTTGGTAAAAAAACCT+AGG + chr8.3:24527598-24527617 MS.gene87318:intron 25.0%
! TATTTCAAACCTATAAAGCA+CGG + chr8.3:24525486-24525505 MS.gene87318:intron 25.0%
! TCTAACATATTTGTGAGAAT+TGG + chr8.3:24525866-24525885 MS.gene87318:CDS 25.0%
! TTATGACCATTCAGTTAATT+TGG - chr8.3:24526669-24526688 None:intergenic 25.0%
!! AGTTTAGATATTTTCTTCAC+TGG - chr8.3:24525366-24525385 None:intergenic 25.0%
!! ATTGTGTGTGATAATTTTGT+TGG - chr8.3:24527666-24527685 None:intergenic 25.0%
!! GTATTTACTAGATTTTGCAA+AGG + chr8.3:24528249-24528268 MS.gene87318:CDS 25.0%
!! TTCTTATTTCATCAGGTAAT+TGG - chr8.3:24528306-24528325 None:intergenic 25.0%
!! TTGTGTGTGATAATTTTGTT+GGG - chr8.3:24527665-24527684 None:intergenic 25.0%
!! TTTAAAATAACCGAACCAAA+TGG - chr8.3:24526720-24526739 None:intergenic 25.0%
!!! AAATGATTTTGGTATCCATA+TGG + chr8.3:24526791-24526810 MS.gene87318:intron 25.0%
!!! AAGAAAAGTGCTACTTTAAT+AGG + chr8.3:24523994-24524013 MS.gene87318:intron 25.0%
!!! GAGTTATTTTGACTTTACTT+CGG - chr8.3:24527639-24527658 None:intergenic 25.0%
!!! GTTTTGATTTAATTAAGGTG+AGG + chr8.3:24528110-24528129 MS.gene87318:intron 25.0%
!!! GTTTTGTTTATTGTTGAATG+TGG + chr8.3:24524225-24524244 MS.gene87318:intron 25.0%
!!! TGTGTTATTGTTTTAGACAT+TGG + chr8.3:24524921-24524940 MS.gene87318:intron 25.0%
AAAGGACCTTGATTCTTTAT+TGG + chr8.3:24528267-24528286 MS.gene87318:CDS 30.0%
AAATACCAATCCAATAGCTT+GGG - chr8.3:24528235-24528254 None:intergenic 30.0%
ACATAACATTGTCTAACAGA+AGG - chr8.3:24527493-24527512 None:intergenic 30.0%
ACTTACAAACTTAAGGTGAT+AGG - chr8.3:24527082-24527101 None:intergenic 30.0%
ATCAAGAAAAACTTGCATTC+TGG + chr8.3:24526403-24526422 MS.gene87318:CDS 30.0%
ATCTATACAAGAAGAAGGAA+GGG + chr8.3:24525293-24525312 MS.gene87318:CDS 30.0%
ATTAATGCTACAACCATTTC+CGG - chr8.3:24526850-24526869 None:intergenic 30.0%
ATTATCTGTAGGTGAATTTG+AGG - chr8.3:24525786-24525805 None:intergenic 30.0%
ATTGGTTAAACCATTTGGTT+CGG + chr8.3:24526707-24526726 MS.gene87318:intron 30.0%
ATTGTGGACTTACAAACTTA+AGG - chr8.3:24527089-24527108 None:intergenic 30.0%
ATTTCTATGTTGTTGGAAAG+TGG + chr8.3:24523869-24523888 MS.gene87318:intron 30.0%
CACACATATAATTACAATGC+AGG + chr8.3:24526488-24526507 MS.gene87318:intron 30.0%
CTATAACTTACTTCAATCTG+TGG - chr8.3:24526102-24526121 None:intergenic 30.0%
CTTACAAACTTAAGGTGATA+GGG - chr8.3:24527081-24527100 None:intergenic 30.0%
GAGATTATCAGAACATGAAA+GGG + chr8.3:24525751-24525770 MS.gene87318:CDS 30.0%
GATTCTGAACAGATATCATA+AGG - chr8.3:24525986-24526005 None:intergenic 30.0%
GATTGACCTATTACAATTTC+AGG - chr8.3:24527462-24527481 None:intergenic 30.0%
GGAAATAAAAAGTAACTCCT+AGG - chr8.3:24527618-24527637 None:intergenic 30.0%
GGTTAATTGGTTAAACCATT+TGG + chr8.3:24526702-24526721 MS.gene87318:intron 30.0%
TAAATACCAATCCAATAGCT+TGG - chr8.3:24528236-24528255 None:intergenic 30.0%
TACATCCAAGGAAAAATTTG+TGG + chr8.3:24525889-24525908 MS.gene87318:CDS 30.0%
TACTTTAATAGGTACAAGCA+TGG + chr8.3:24524005-24524024 MS.gene87318:intron 30.0%
TAGGAAGTTAGGTTAATGAA+TGG + chr8.3:24527994-24528013 MS.gene87318:intron 30.0%
TCTGACACTTTATTATCTGT+AGG - chr8.3:24525797-24525816 None:intergenic 30.0%
TGCTACATCTTCATTTAATG+TGG + chr8.3:24527729-24527748 MS.gene87318:intron 30.0%
TTACAAACTTAAGGTGATAG+GGG - chr8.3:24527080-24527099 None:intergenic 30.0%
TTCTCATCTATACAAGAAGA+AGG + chr8.3:24525288-24525307 MS.gene87318:CDS 30.0%
TTGAGTGGAGATTTCTTTAA+AGG - chr8.3:24525396-24525415 None:intergenic 30.0%
TTTGTCCCTGAAATTGTAAT+AGG + chr8.3:24527453-24527472 MS.gene87318:intron 30.0%
! AACCTAACTTCCTAAACTTT+TGG - chr8.3:24527988-24528007 None:intergenic 30.0%
! AATTACTTCTCATGTGGTTT+TGG - chr8.3:24525089-24525108 None:intergenic 30.0%
! AGAATGCAAGTTTTTCTTGA+TGG - chr8.3:24526404-24526423 None:intergenic 30.0%
! ATGTTTGAAACTATGAAGCA+CGG - chr8.3:24525643-24525662 None:intergenic 30.0%
! CAATGGACGAAATTAACTTT+TGG + chr8.3:24527569-24527588 MS.gene87318:intron 30.0%
! GAAAGTGCAAATGTTACTAA+GGG - chr8.3:24527269-24527288 None:intergenic 30.0%
! GAGTCAACACTAAATGATTT+TGG + chr8.3:24526780-24526799 MS.gene87318:intron 30.0%
! GTTAATTGCAACATGCTTTT+AGG - chr8.3:24527141-24527160 None:intergenic 30.0%
! TCTCTTTGTTAGTTTCTCAT+AGG - chr8.3:24526136-24526155 None:intergenic 30.0%
! TGATTCCACAAATTTTTCCT+TGG - chr8.3:24525897-24525916 None:intergenic 30.0%
!! AAACATTGCATTTGTTGTTC+TGG - chr8.3:24526074-24526093 None:intergenic 30.0%
!! AGATCTTCTGAAACTCTATT+TGG - chr8.3:24525833-24525852 None:intergenic 30.0%
!! CATTGTTTTCTGAGAAAAAG+TGG + chr8.3:24523721-24523740 MS.gene87318:CDS 30.0%
!!! AGCCTTATGATTTTAGTTTC+AGG + chr8.3:24528389-24528408 MS.gene87318:CDS 30.0%
!!! TAGTGATGTTTTGAAAGCTT+TGG + chr8.3:24524398-24524417 MS.gene87318:intron 30.0%
!!! TCATCATTTTTTGCAGCTTT+TGG - chr8.3:24527206-24527225 None:intergenic 30.0%
!!! TTGGTTCGGTTATTTTAAAC+CGG + chr8.3:24526721-24526740 MS.gene87318:intron 30.0%
AAAGTTGAGAAACATACTGC+AGG - chr8.3:24527311-24527330 None:intergenic 35.0%
AAATAAGACCCAGAAGTTGA+AGG - chr8.3:24525926-24525945 None:intergenic 35.0%
AAGAGAGAGAGACTAACATA+TGG - chr8.3:24524541-24524560 None:intergenic 35.0%
AATAATCACAGTGGGAGTAA+TGG + chr8.3:24525237-24525256 MS.gene87318:CDS 35.0%
ACACTGTCAATAATCACAGT+GGG + chr8.3:24525229-24525248 MS.gene87318:CDS 35.0%
ACCTTGATTCTTTATTGGAC+TGG + chr8.3:24528272-24528291 MS.gene87318:CDS 35.0%
ACGTGAATCTCTTTCAAAGT+TGG + chr8.3:24528357-24528376 MS.gene87318:CDS 35.0%
ACTATGATCCAAAGGTCTTA+CGG - chr8.3:24526598-24526617 None:intergenic 35.0%
ACTTGCTTCTTTGAACTTGA+AGG + chr8.3:24526371-24526390 MS.gene87318:CDS 35.0%
AGAGTGCATGTTTGAATTGA+CGG - chr8.3:24524689-24524708 None:intergenic 35.0%
AGTTAAATGCCTTGAAGGAA+GGG + chr8.3:24528333-24528352 MS.gene87318:CDS 35.0%
ATAATCACAGTGGGAGTAAT+GGG + chr8.3:24525238-24525257 MS.gene87318:CDS 35.0%
CAAAAACACCTTCAACTTCT+GGG + chr8.3:24525915-24525934 MS.gene87318:CDS 35.0%
CAAGTTGTGAATTTCAGACA+AGG + chr8.3:24524997-24525016 MS.gene87318:CDS 35.0%
CATCTATACAAGAAGAAGGA+AGG + chr8.3:24525292-24525311 MS.gene87318:CDS 35.0%
CATGGATCAATTAAAGTTGC+AGG + chr8.3:24525437-24525456 MS.gene87318:CDS 35.0%
CCACATGCAGAAAATAAATG+TGG - chr8.3:24528044-24528063 None:intergenic 35.0%
CTAACATATGGAGGAAGATA+AGG - chr8.3:24524529-24524548 None:intergenic 35.0%
CTCATGGTTAACTGACAAAA+GGG + chr8.3:24524072-24524091 MS.gene87318:intron 35.0%
CTCATTGTCAGATGCATATT+TGG - chr8.3:24524818-24524837 None:intergenic 35.0%
CTGCAACTTTAATTGATCCA+TGG - chr8.3:24525439-24525458 None:intergenic 35.0%
CTTCTTTAAACTTCTCGAAC+CGG + chr8.3:24526622-24526641 MS.gene87318:intron 35.0%
CTTGCTTCTTTGAACTTGAA+GGG + chr8.3:24526372-24526391 MS.gene87318:CDS 35.0%
GAAGTTGAACTATGATCCAA+AGG - chr8.3:24526606-24526625 None:intergenic 35.0%
GAATCCAAAACAAGAGAAGT+TGG + chr8.3:24526001-24526020 MS.gene87318:CDS 35.0%
GATACTAATTCCCAAGCTAT+TGG + chr8.3:24528222-24528241 MS.gene87318:CDS 35.0%
GGAGATTATCAGAACATGAA+AGG + chr8.3:24525750-24525769 MS.gene87318:CDS 35.0%
GGTTGTAGCATTAATGCAAA+AGG + chr8.3:24526855-24526874 MS.gene87318:CDS 35.0%
GTAAAATTCAGGTACCTACT+TGG + chr8.3:24526345-24526364 MS.gene87318:intron 35.0%
TAATTCCCAAGCTATTGGAT+TGG + chr8.3:24528227-24528246 MS.gene87318:CDS 35.0%
TATTGTTGAATGTGGAAAGC+AGG + chr8.3:24524233-24524252 MS.gene87318:intron 35.0%
TCAAAAACACCTTCAACTTC+TGG + chr8.3:24525914-24525933 MS.gene87318:CDS 35.0%
TCCAGTCCAATAAAGAATCA+AGG - chr8.3:24528276-24528295 None:intergenic 35.0%
TCTATACAAGAAGAAGGAAG+GGG + chr8.3:24525294-24525313 MS.gene87318:CDS 35.0%
TCTCAAATTATTAGCGGTGT+CGG - chr8.3:24525553-24525572 None:intergenic 35.0%
TGAGTTTGACAAAACCAAAG+TGG + chr8.3:24524723-24524742 MS.gene87318:intron 35.0%
TGCCAAAAGTTTAGGAAGTT+AGG + chr8.3:24527983-24528002 MS.gene87318:intron 35.0%
TTAGTAATCATGAAGCCTCA+TGG + chr8.3:24524056-24524075 MS.gene87318:intron 35.0%
TTATTTCAGCCAATGTAGCA+AGG + chr8.3:24525940-24525959 MS.gene87318:CDS 35.0%
TTCTAAGTATGCCTACCATA+TGG - chr8.3:24526809-24526828 None:intergenic 35.0%
TTCTTTAAACTTCTCGAACC+GGG + chr8.3:24526623-24526642 MS.gene87318:intron 35.0%
TTGAATATAACCAGACGTGT+CGG + chr8.3:24526221-24526240 MS.gene87318:intron 35.0%
TTGTCACGCATCAATCAAAA+TGG - chr8.3:24527793-24527812 None:intergenic 35.0%
TTTCAGGCAACAATAGTAGT+AGG + chr8.3:24527006-24527025 MS.gene87318:intron 35.0%
! AAGAAGCAAGTTTTCCAAGT+AGG - chr8.3:24526362-24526381 None:intergenic 35.0%
! AGAGCATTTACAAGACCTTT+GGG + chr8.3:24524484-24524503 MS.gene87318:CDS 35.0%
! AGGCAAGCTAAGATTTTATC+CGG - chr8.3:24526743-24526762 None:intergenic 35.0%
! GATCTTTTTCCTTGCTACAT+TGG - chr8.3:24525952-24525971 None:intergenic 35.0%
! GCTTGGTTTCTTATTTCATC+AGG - chr8.3:24528313-24528332 None:intergenic 35.0%
! GCTTTGAATTACTTCTCATG+TGG - chr8.3:24525095-24525114 None:intergenic 35.0%
! GGAAAGTGCAAATGTTACTA+AGG - chr8.3:24527270-24527289 None:intergenic 35.0%
! GTGAAAGCAAGAAGCATATT+TGG + chr8.3:24527227-24527246 MS.gene87318:CDS 35.0%
! GTGTGATAATTTTGTTGGGT+AGG - chr8.3:24527661-24527680 None:intergenic 35.0%
! TGACCATTCAGTTAATTTGG+CGG - chr8.3:24526666-24526685 None:intergenic 35.0%
! TTCAGGTAGATAAGTTGAAG+AGG + chr8.3:24524422-24524441 MS.gene87318:intron 35.0%
!! AAGAGCATTTACAAGACCTT+TGG + chr8.3:24524483-24524502 MS.gene87318:CDS 35.0%
!! CCACATTTATTTTCTGCATG+TGG + chr8.3:24528041-24528060 MS.gene87318:intron 35.0%
!! GATGGATTTGATTTGACTAG+TGG + chr8.3:24527852-24527871 MS.gene87318:intron 35.0%
!! GATTTTGGTATCCATATGGT+AGG + chr8.3:24526795-24526814 MS.gene87318:intron 35.0%
!!! GTTTTGAAAGCTTTGGTTTC+AGG + chr8.3:24524405-24524424 MS.gene87318:intron 35.0%
!!! TCATGTGGTTTTGGTCAATA+GGG - chr8.3:24525080-24525099 None:intergenic 35.0%
AACTGAATGGTCATAAAGGC+AGG + chr8.3:24526673-24526692 MS.gene87318:intron 40.0%
ACAGTGAGTTTGACGAAATC+AGG + chr8.3:24524593-24524612 MS.gene87318:intron 40.0%
ACATATGGAGGAAGATAAGG+CGG - chr8.3:24524526-24524545 None:intergenic 40.0%
ACATTGAACCGTAAGACCTT+TGG + chr8.3:24526587-24526606 MS.gene87318:intron 40.0%
AGAGAGAGACTAACATATGG+AGG - chr8.3:24524538-24524557 None:intergenic 40.0%
AGGCAGGTTCAAAGGTTAAT+TGG + chr8.3:24526689-24526708 MS.gene87318:intron 40.0%
AGTAAACCAGTGTAGCAGAA+AGG - chr8.3:24526467-24526486 None:intergenic 40.0%
ATTTGGATTCGCGACGAATT+TGG - chr8.3:24524801-24524820 None:intergenic 40.0%
CAAGCAGTTAAATGCCTTGA+AGG + chr8.3:24528328-24528347 MS.gene87318:CDS 40.0%
CAATGCAGGACTAAAGAGTT+TGG + chr8.3:24526502-24526521 MS.gene87318:intron 40.0%
CAGTTAAATGCCTTGAAGGA+AGG + chr8.3:24528332-24528351 MS.gene87318:CDS 40.0%
CCAAACTCTGCCAAAAGTTT+AGG + chr8.3:24527975-24527994 MS.gene87318:intron 40.0%
CCTCATGGTTAACTGACAAA+AGG + chr8.3:24524071-24524090 MS.gene87318:intron 40.0%
CTGTGATTATTGACAGTGTC+AGG - chr8.3:24525228-24525247 None:intergenic 40.0%
CTTCTGACAATGCATGTTTC+AGG + chr8.3:24526990-24527009 MS.gene87318:intron 40.0%
GAACCGCCAAATTAACTGAA+TGG + chr8.3:24526660-24526679 MS.gene87318:intron 40.0%
GACACTGTCAATAATCACAG+TGG + chr8.3:24525228-24525247 MS.gene87318:CDS 40.0%
GATAATCTCCATTCCAGCTA+AGG - chr8.3:24525740-24525759 None:intergenic 40.0%
GCAGGTAACTACACTTATTG+TGG + chr8.3:24525455-24525474 MS.gene87318:intron 40.0%
GGGAGCAAAGGAATGAAAAA+TGG + chr8.3:24524273-24524292 MS.gene87318:CDS 40.0%
GTAACATTTGCACTTTCCTG+TGG + chr8.3:24527272-24527291 MS.gene87318:CDS 40.0%
TAATTTCGTCCATTGAGACG+TGG - chr8.3:24527564-24527583 None:intergenic 40.0%
TGGTAGGCATACTTAGAACA+TGG + chr8.3:24526811-24526830 MS.gene87318:intron 40.0%
TGTGAGAATTGGTACATCCA+AGG + chr8.3:24525877-24525896 MS.gene87318:CDS 40.0%
TGTTCTGGTGAGATCAACAT+TGG - chr8.3:24526059-24526078 None:intergenic 40.0%
TGTTGGAAGAAGAAGTGGTT+AGG + chr8.3:24524965-24524984 MS.gene87318:CDS 40.0%
TTCTGGCAAGAGAATTCTGT+GGG - chr8.3:24525176-24525195 None:intergenic 40.0%
! AGCAAGAAGCATATTTGGAC+TGG + chr8.3:24527232-24527251 MS.gene87318:CDS 40.0%
! CCTAAACTTTTGGCAGAGTT+TGG - chr8.3:24527978-24527997 None:intergenic 40.0%
! CCTTTTGTCAGTTAACCATG+AGG - chr8.3:24524074-24524093 None:intergenic 40.0%
! CTTCAAGGCATTTAACTGCT+TGG - chr8.3:24528330-24528349 None:intergenic 40.0%
! GAAGCATATTTGGACTGGAA+TGG + chr8.3:24527237-24527256 MS.gene87318:CDS 40.0%
! GTTTGATGGTTATTAGCTGC+TGG + chr8.3:24526283-24526302 MS.gene87318:intron 40.0%
! TGAGCTGATTCATGTTTGAG+TGG - chr8.3:24525411-24525430 None:intergenic 40.0%
!! ATAAAATCACGGTGCCACTT+TGG - chr8.3:24524740-24524759 None:intergenic 40.0%
!! CTTAGCTTGCCTAATACTCT+TGG + chr8.3:24526751-24526770 MS.gene87318:intron 40.0%
!! TGGACCAACTTCTCTTGTTT+TGG - chr8.3:24526008-24526027 None:intergenic 40.0%
!!! CTCATGTGGTTTTGGTCAAT+AGG - chr8.3:24525081-24525100 None:intergenic 40.0%
!!! TTTGTTTTGGTTGCCTTAGC+TGG + chr8.3:24525724-24525743 MS.gene87318:intron 40.0%
AAGACACCTTTCTGCTACAC+TGG + chr8.3:24526458-24526477 MS.gene87318:intron 45.0%
ACAACCATTTCCGGACTTTC+AGG - chr8.3:24526841-24526860 None:intergenic 45.0%
ACACCGACACTTTGGATTGA+AGG - chr8.3:24526265-24526284 None:intergenic 45.0%
ACATGGCATACCTGAAAGTC+CGG + chr8.3:24526828-24526847 MS.gene87318:CDS 45.0%
ACCATCAAACACCGACACTT+TGG - chr8.3:24526273-24526292 None:intergenic 45.0%
ACGCCTTCAATCCAAAGTGT+CGG + chr8.3:24526259-24526278 MS.gene87318:intron 45.0%
AGGTCTTACGGTTCAATGTC+TGG - chr8.3:24526586-24526605 None:intergenic 45.0%
ATGTGGAAAGCAGGAGAAGA+TGG + chr8.3:24524242-24524261 MS.gene87318:intron 45.0%
ATTCACGTTCCCTTCCTTCA+AGG - chr8.3:24528345-24528364 None:intergenic 45.0%
CAGGCAACAATAGTAGTAGG+AGG + chr8.3:24527009-24527028 MS.gene87318:intron 45.0%
CATACCTGAAAGTCCGGAAA+TGG + chr8.3:24526834-24526853 MS.gene87318:CDS 45.0%
CTTCTGGCAAGAGAATTCTG+TGG - chr8.3:24525177-24525196 None:intergenic 45.0%
GCACGGACACTCTTTAGATT+AGG - chr8.3:24525626-24525645 None:intergenic 45.0%
GGTCATAAAGGCAGGTTCAA+AGG + chr8.3:24526681-24526700 MS.gene87318:intron 45.0%
GTTCGATAGTAGTTTGGTCC+CGG - chr8.3:24526644-24526663 None:intergenic 45.0%
TCTGGCAAGAGAATTCTGTG+GGG - chr8.3:24525175-24525194 None:intergenic 45.0%
TCTTTAGATTAGGCGTGTCC+CGG - chr8.3:24525616-24525635 None:intergenic 45.0%
TGAATCAGCTCAGAAGTCCA+TGG + chr8.3:24525419-24525438 MS.gene87318:CDS 45.0%
TGACACTGACACATAGACAC+CGG + chr8.3:24526174-24526193 MS.gene87318:intron 45.0%
TTGCACTTTCCTGTGGAAGT+TGG + chr8.3:24527279-24527298 MS.gene87318:CDS 45.0%
TTGGCGGTTCGATAGTAGTT+TGG - chr8.3:24526650-24526669 None:intergenic 45.0%
TTTGGTTGCCTTAGCTGGAA+TGG + chr8.3:24525729-24525748 MS.gene87318:intron 45.0%
! ATTGGAACTTCTAGCTGAGG+TGG + chr8.3:24524939-24524958 MS.gene87318:CDS 45.0%
! GACATTGGAACTTCTAGCTG+AGG + chr8.3:24524936-24524955 MS.gene87318:intron 45.0%
!! CTCGTGACTCCAAGAGTATT+AGG - chr8.3:24526763-24526782 None:intergenic 45.0%
!! CTTTCTGCTAGAAGCACTTC+TGG - chr8.3:24525193-24525212 None:intergenic 45.0%
!! TCCAAAGTGTCGGTGTTTGA+TGG + chr8.3:24526269-24526288 MS.gene87318:intron 45.0%
!! TTATGTGTTGGTGTCGACAC+CGG + chr8.3:24525594-24525613 MS.gene87318:intron 45.0%
!!! ATAACCAGACGTGTCGGTTT+TGG + chr8.3:24526227-24526246 MS.gene87318:intron 45.0%
AACCTATAAAGCACGGACCC+CGG + chr8.3:24525493-24525512 MS.gene87318:intron 50.0%
AAGCAGGAGAAGATGGAAGG+AGG + chr8.3:24524249-24524268 MS.gene87318:intron 50.0%
ACATCACTGCCACGTCTCAA+TGG + chr8.3:24527552-24527571 MS.gene87318:intron 50.0%
AGACGAGGCAAAGATCCCAA+AGG - chr8.3:24524502-24524521 None:intergenic 50.0%
AGGAGAAGATGGAAGGAGGA+GGG + chr8.3:24524253-24524272 MS.gene87318:intron 50.0%
AGGTGAAGACCAACTTCCAC+AGG - chr8.3:24527291-24527310 None:intergenic 50.0%
ATTGAGACGTGGCAGTGATG+TGG - chr8.3:24527553-24527572 None:intergenic 50.0%
CTGGCAAGAGAATTCTGTGG+GGG - chr8.3:24525174-24525193 None:intergenic 50.0%
GGAAAGCAGGAGAAGATGGA+AGG + chr8.3:24524246-24524265 MS.gene87318:intron 50.0%
! CTTTGGATTGAAGGCGTGTC+TGG - chr8.3:24526256-24526275 None:intergenic 50.0%
! GGCAGTGTTGGAAGAAGAAG+TGG + chr8.3:24524960-24524979 MS.gene87318:CDS 50.0%
!! TATGTGTTGGTGTCGACACC+GGG + chr8.3:24525595-24525614 MS.gene87318:intron 50.0%
ATGGAAGGAGGAGGGAGCAA+AGG + chr8.3:24524261-24524280 MS.gene87318:CDS 55.0%
CAGGAGAAGATGGAAGGAGG+AGG + chr8.3:24524252-24524271 MS.gene87318:intron 55.0%
GCAGTGATGTGGAGTTCACG+TGG - chr8.3:24527542-24527561 None:intergenic 55.0%
GGAAGATAAGGCGGAAGACG+AGG - chr8.3:24524517-24524536 None:intergenic 55.0%
GTGTCCAAAACCGACACGTC+TGG - chr8.3:24526234-24526253 None:intergenic 55.0%
TCTAGCTGAGGTGGCAGTGT+TGG + chr8.3:24524948-24524967 MS.gene87318:CDS 55.0%
GTCCGGGGTCCGTGCTTTAT+AGG - chr8.3:24525498-24525517 None:intergenic 60.0%
GTCCGTGTCCGTGTCGTGTC+CGG - chr8.3:24525515-24525534 None:intergenic 65.0%
TCCGTGTCCGTGTCGTGTCC+GGG - chr8.3:24525514-24525533 None:intergenic 65.0%
CACGGACCCCGGACACGACA+CGG + chr8.3:24525504-24525523 MS.gene87318:intron 70.0%
CCCCGGACACGACACGGACA+CGG + chr8.3:24525510-24525529 MS.gene87318:intron 70.0%
CCGTGTCCGTGTCGTGTCCG+GGG - chr8.3:24525513-24525532 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 24523705 24528429 24523705 ID=MS.gene87318
chr8.3 mRNA 24523705 24528429 24523705 ID=MS.gene87318.t1;Parent=MS.gene87318
chr8.3 exon 24523705 24523791 24523705 ID=MS.gene87318.t1.exon1;Parent=MS.gene87318.t1
chr8.3 CDS 24523705 24523791 24523705 ID=cds.MS.gene87318.t1;Parent=MS.gene87318.t1
chr8.3 exon 24524255 24524338 24524255 ID=MS.gene87318.t1.exon2;Parent=MS.gene87318.t1
chr8.3 CDS 24524255 24524338 24524255 ID=cds.MS.gene87318.t1;Parent=MS.gene87318.t1
chr8.3 exon 24524427 24524543 24524427 ID=MS.gene87318.t1.exon3;Parent=MS.gene87318.t1
chr8.3 CDS 24524427 24524543 24524427 ID=cds.MS.gene87318.t1;Parent=MS.gene87318.t1
chr8.3 exon 24524937 24525458 24524937 ID=MS.gene87318.t1.exon4;Parent=MS.gene87318.t1
chr8.3 CDS 24524937 24525458 24524937 ID=cds.MS.gene87318.t1;Parent=MS.gene87318.t1
chr8.3 exon 24525743 24526110 24525743 ID=MS.gene87318.t1.exon5;Parent=MS.gene87318.t1
chr8.3 CDS 24525743 24526110 24525743 ID=cds.MS.gene87318.t1;Parent=MS.gene87318.t1
chr8.3 exon 24526356 24526455 24526356 ID=MS.gene87318.t1.exon6;Parent=MS.gene87318.t1
chr8.3 CDS 24526356 24526455 24526356 ID=cds.MS.gene87318.t1;Parent=MS.gene87318.t1
chr8.3 exon 24526817 24526876 24526817 ID=MS.gene87318.t1.exon7;Parent=MS.gene87318.t1
chr8.3 CDS 24526817 24526876 24526817 ID=cds.MS.gene87318.t1;Parent=MS.gene87318.t1
chr8.3 exon 24527012 24527095 24527012 ID=MS.gene87318.t1.exon8;Parent=MS.gene87318.t1
chr8.3 CDS 24527012 24527095 24527012 ID=cds.MS.gene87318.t1;Parent=MS.gene87318.t1
chr8.3 exon 24527197 24527313 24527197 ID=MS.gene87318.t1.exon9;Parent=MS.gene87318.t1
chr8.3 CDS 24527197 24527313 24527197 ID=cds.MS.gene87318.t1;Parent=MS.gene87318.t1
chr8.3 exon 24528127 24528429 24528127 ID=MS.gene87318.t1.exon10;Parent=MS.gene87318.t1
chr8.3 CDS 24528127 24528429 24528127 ID=cds.MS.gene87318.t1;Parent=MS.gene87318.t1
Gene Sequence

>MS.gene87318

TGCTATTACTACATTGCATTGTTTTCTGAGAAAAAGTGGAAGAAAAAAATGAATGCTAGAGCACGCTCAACTCTTCATTCAATCAAAGTAACTTCTCTTTCTTCTTCTTCTTCTTCTTCTAGACTAGTTTTTCATTTTTATTTTAAAAATGATTTTTTTTTAATATTTCTATGTTGTTGGAAAGTGGAATAGAAGATCTTATTGAAATTAAATTGAATTACATATTTAAAATTTTGAAAAACTATGTTTATGAATAATTGAAAAAGAAAAAGCTTGATTTCAAAGAATAAAGAAAAGTGCTACTTTAATAGGTACAAGCATGGAATTTTTCTTCAAATTTTGAAATTATGTTTAGTAATCATGAAGCCTCATGGTTAACTGACAAAAGGGTGTGTCATGCACTTTTGATCCAAATCTAAAATCTTGTTCTTTAACTTCTCTCAAGAAAAGAATAATTTATATTATTTTCTTTATATTCTTCTACTTTTAGCTTTTTTTATTCTTTGTAAACAAAATCAAAGTTTTGTTTATTGTTGAATGTGGAAAGCAGGAGAAGATGGAAGGAGGAGGGAGCAAAGGAATGAAAAATGGTCGTCGATCTAATCGAGAAAAGAAGATTGCATTGTTACAAGATGTACTTTGAATCTTCACTCAAATGAATAAGAATTTTTGTGTTATTTTCTTCATACAAAATAGTGATGTTTTGAAAGCTTTGGTTTCAGGTAGATAAGTTGAAGAGGAAGCTAAGACATGAAGAGAATGTTCACAGAGCTTTAGAAAGAGCATTTACAAGACCTTTGGGATCTTTGCCTCGTCTTCCGCCTTATCTTCCTCCATATGTTAGTCTCTCTCTCTTCTAATCGAAGAATTTAGTATATATTTGGAATCACAGTGAGTTTGACGAAATCAGGATGACACTGTAACTGTGTTGACGTTGACTCTTGTCAAAATCACAGTGACACTGTAATTCTGTCAAATATACCGTCAATTCAAACATGCACTCTGACAATGAGTTTGTTGAGTTTGACAAAACCAAAGTGGCACCGTGATTTTATTGAAGCTAAAAAATATAGCTTTTATCTATGTGGTTTTGCCAAATTCGTCGCGAATCCAAATATGCATCTGACAATGAGTTCATTTCATTGTATTGTATTTGAATTATATTGCTAGTGAATTTTGTTTTTGAAGTTGATTTTTGGATTCATTGAATGTAATGTGTGTTATTGTTTTAGACATTGGAACTTCTAGCTGAGGTGGCAGTGTTGGAAGAAGAAGTGGTTAGGCTTGAAGAACAAGTTGTGAATTTCAGACAAGGTTTATATCAAGAAGCTGTTTACATTTCATCAAAGAGAAATGCTGAAAATTTGAATGACCCTATTGACCAAAACCACATGAGAAGTAATTCAAAGCATCAAAGATCAAAATCTTATTCACAAAGTGAATTTAATTCAATGACAACAAGGCTTCCCCCACAGAATTCTCTTGCCAGAAGTGCTTCTAGCAGAAAGCTATTATTCTCTCCTGACACTGTCAATAATCACAGTGGGAGTAATGGGAAGCAATTGCATAGAAAACAAGATTCATTCTCATCTATACAAGAAGAAGGAAGGGGAAAAGAGAATTTACTGTTTAGTAACTTTTTGAAAGATAAACAGTCTCCAGTGAAGAAAATATCTAAACTCATCACTCCTTTAAAGAAATCTCCACTCAAACATGAATCAGCTCAGAAGTCCATGGATCAATTAAAGTTGCAGGTAACTACACTTATTGTGGCAACTAAATATTTCAAACCTATAAAGCACGGACCCCGGACACGACACGGACACGGACACTGTCACTGTCACGCCGACACCGCTAATAATTTGAGAAAATCACATAATTTAGTGTAATTATGTGTTGGTGTCGACACCGGGACACGCCTAATCTAAAGAGTGTCCGTGCTTCATAGTTTCAAACATGTTAGTTAGTCTATGATATGATTGATTATGCTATCTTCTCAACAATTTTTTGTTTAATCTTTTTGTTTTGGTTGCCTTAGCTGGAATGGAGATTATCAGAACATGAAAGGGCACATAGTTCCTCAAATTCACCTACAGATAATAAAGTGTCAGAAGTACATAGCACACCAAATAGAGTTTCAGAAGATCTTGTCAAGTGTTTGTCTAACATATTTGTGAGAATTGGTACATCCAAGGAAAAATTTGTGGAATCAAAAACACCTTCAACTTCTGGGTCTTATTTCAGCCAATGTAGCAAGGAAAAAGATCAGTTTTGTGATCCTTATGATATCTGTTCAGAATCCAAAACAAGAGAAGTTGGTCCATATAAGAATTTATGTGAAATTAAAGGCTCCAATGTTGATCTCACCAGAACAACAAATGCAATGTTTCTTATCCACAGATTGAAGTAAGTTATAGATGTATTTTAACCTATGAGAAACTAACAAAGAGACTGATATTGTCATTATACTGACACTGACACATAGACACCGGTAATAATTTGATAAATTGAAATAATTGAATATAACCAGACGTGTCGGTTTTGGACACCAGACACGCCTTCAATCCAAAGTGTCGGTGTTTGATGGTTATTAGCTGCTGGTTGATGATACTAATATGATATATTTACATAATCTTTTGTGTAAAATTCAGGTACCTACTTGGAAAACTTGCTTCTTTGAACTTGAAGGGACTTAACCATCAAGAAAAACTTGCATTCTGGATAAATACTTACAATTCTTCAATTCTGAATGTAAGACACCTTTCTGCTACACTGGTTTACTACACACATATAATTACAATGCAGGACTAAAGAGTTTGGTCTATTAGTTCTACATTTGAATTTGATGAAAATAATGTTTTAAATTTTAAAAACTGAACCAGACATTGAACCGTAAGACCTTTGGATCATAGTTCAACTTCTTTAAACTTCTCGAACCGGGACCAAACTACTATCGAACCGCCAAATTAACTGAATGGTCATAAAGGCAGGTTCAAAGGTTAATTGGTTAAACCATTTGGTTCGGTTATTTTAAACCGGATAAAATCTTAGCTTGCCTAATACTCTTGGAGTCACGAGTCAACACTAAATGATTTTGGTATCCATATGGTAGGCATACTTAGAACATGGCATACCTGAAAGTCCGGAAATGGTTGTAGCATTAATGCAAAAGGTATGATAATCTGAGCAATATTCTCAGCATTATATATTTGTTTTCTAAAAATTATAATACTCAAAGCAGTAGAAACATTGCTGATTTTTTTCATCTGAATATGTATTTGTTCTCTTCTGACAATGCATGTTTCAGGCAACAATAGTAGTAGGAGGACAGTTGCTGAATGCAATCACAATAGAGCATTTTATCTTGAGACTCCCCTATCACCTTAAGTTTGTAAGTCCACAATTTTATCTTGATGTGTTTTATCTATATTGTCCTAAAAGCATGTTGCAATTAACTAGTCCCTTAATTTCTATCTTTATTTCTTTCAACAGACATGTCCAAAAGCTGCAAAAAATGATGAAGTGAAAGCAAGAAGCATATTTGGACTGGAATGGTCTGAGCCCTTAGTAACATTTGCACTTTCCTGTGGAAGTTGGTCTTCACCTGCAGTATGTTTCTCAACTTTATAACAGCATAAAGCATTTTCTTTTACTTAAATCAATGGTTTAAATTAGCACAGTACTCTTTTTTTTTTTTGGTACAATTAGCACAGCACTCTAGTATTAAATTTTAGAGTTTTTAGACAACTTTGTCCCTGAAATTGTAATAGGTCAATCAAAATAGTCCTTCTGTTAGACAATGTTATGTGACATGTTAAATAAAAATGTGATAGTCCACGTGAACTCCACATCACTGCCACGTCTCAATGGACGAAATTAACTTTTGGTATAATTATGTTTGGTAAAAAAACCTAGGAGTTACTTTTTATTTCCGAAGTAAAGTCAAAATAACTCCTACCCAACAAAATTATCACACACAATTTTGTCACTAGAGATGTGGTAGCGATGTGGAGTCTGCACGGATTGCTACATCTTCATTTAATGTGGCGCGCCATGTTTTCTAATAGCTAAACTTAACGCAGAATCCATTTTGATTGATGCGTGACAATTTCAACTACGAAATTGTCACGCATCAATAAAATTCAATGATGGATTTGATTTGACTAGTGGTTACAATTTTAGCGACGAAATTGCCTATTCACTCTAAATTTAATTTACAAGCTTTCTAGTTTAGACTTTCAGTTGTGCATATTATTGTCATTTTCAATCACCAAACTCTGCCAAAAGTTTAGGAAGTTAGGTTAATGAATGGTTTCTTTCTATACCTAACACAAATCCACATTTATTTTCTGCATGTGGATATATAATGTACTTAAATTAAATTGCACTGAAGGAGCAATTTTTTGTTTTGATTTAATTAAGGTGAGGGTGTATACAGCAACACAAGTTGATAATGAGTTAGAAGCAGCAAAGAGAGATTATTTACAAGCTACAATTGGAATTACAAAAACAAACAAGATACTAATTCCCAAGCTATTGGATTGGTATTTACTAGATTTTGCAAAGGACCTTGATTCTTTATTGGACTGGATTTGTCTCCAATTACCTGATGAAATAAGAAACCAAGCAGTTAAATGCCTTGAAGGAAGGGAACGTGAATCTCTTTCAAAGTTGGTACAAATGAAGCCTTATGATTTTAGTTTCAGGTTGCTTTTACACCAATGA
Protein sequence

>MS.gene87318.t1

CYYYIALFSEKKWKKKMNARARSTLHSIKEKMEGGGSKGMKNGRRSNREKKIALLQDVDKLKRKLRHEENVHRALERAFTRPLGSLPRLPPYLPPYTLELLAEVAVLEEEVVRLEEQVVNFRQGLYQEAVYISSKRNAENLNDPIDQNHMRSNSKHQRSKSYSQSEFNSMTTRLPPQNSLARSASSRKLLFSPDTVNNHSGSNGKQLHRKQDSFSSIQEEGRGKENLLFSNFLKDKQSPVKKISKLITPLKKSPLKHESAQKSMDQLKLQLEWRLSEHERAHSSSNSPTDNKVSEVHSTPNRVSEDLVKCLSNIFVRIGTSKEKFVESKTPSTSGSYFSQCSKEKDQFCDPYDICSESKTREVGPYKNLCEIKGSNVDLTRTTNAMFLIHRLKYLLGKLASLNLKGLNHQEKLAFWINTYNSSILNAYLEHGIPESPEMVVALMQKATIVVGGQLLNAITIEHFILRLPYHLKFTCPKAAKNDEVKARSIFGLEWSEPLVTFALSCGSWSSPAVRVYTATQVDNELEAAKRDYLQATIGITKTNKILIPKLLDWYLLDFAKDLDSLLDWICLQLPDEIRNQAVKCLEGRERESLSKLVQMKPYDFSFRLLLHQ