Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88149.t1 | XP_003605489.2 | 80.4 | 255 | 50 | 0 | 1 | 255 | 1 | 255 | 1.10E-103 | 386.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88149.t1 | F4HT21 | 57.9 | 254 | 97 | 2 | 2 | 255 | 6 | 249 | 3.4e-77 | 290.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88149.t1 | G7JN49 | 80.4 | 255 | 50 | 0 | 1 | 255 | 1 | 255 | 8.0e-104 | 386.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene88149 | MS.gene63514 | PPI |
| MS.gene009458 | MS.gene88149 | PPI |
| MS.gene51627 | MS.gene88149 | PPI |
| MS.gene88149 | MS.gene56256 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88149.t1 | MTR_4g032220 | 89.049 | 347 | 37 | 1 | 1 | 346 | 1 | 347 | 0.0 | 591 |
| MS.gene88149.t1 | MTR_4g032240 | 84.195 | 348 | 53 | 1 | 1 | 346 | 1 | 348 | 0.0 | 584 |
| MS.gene88149.t1 | MTR_4g032300 | 65.330 | 349 | 108 | 4 | 2 | 346 | 1 | 340 | 8.39e-161 | 453 |
| MS.gene88149.t1 | MTR_4g032350 | 67.976 | 331 | 100 | 1 | 9 | 339 | 10 | 334 | 4.66e-160 | 452 |
| MS.gene88149.t1 | MTR_4g032330 | 59.701 | 67 | 26 | 1 | 281 | 346 | 17 | 83 | 1.51e-15 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88149.t1 | AT1G33970 | 56.418 | 335 | 136 | 2 | 2 | 336 | 6 | 330 | 1.50e-126 | 367 |
| MS.gene88149.t1 | AT1G33970 | 56.418 | 335 | 136 | 2 | 2 | 336 | 6 | 330 | 1.50e-126 | 367 |
| MS.gene88149.t1 | AT1G33970 | 56.418 | 335 | 136 | 2 | 2 | 336 | 6 | 330 | 1.50e-126 | 367 |
| MS.gene88149.t1 | AT1G33970 | 56.418 | 335 | 136 | 2 | 2 | 336 | 6 | 330 | 1.50e-126 | 367 |
| MS.gene88149.t1 | AT1G33970 | 56.071 | 280 | 113 | 2 | 2 | 281 | 6 | 275 | 1.49e-104 | 308 |
| MS.gene88149.t1 | AT1G33960 | 51.049 | 286 | 135 | 2 | 18 | 303 | 35 | 315 | 6.13e-91 | 276 |
| MS.gene88149.t1 | AT1G33960 | 51.049 | 286 | 135 | 2 | 18 | 303 | 59 | 339 | 2.16e-90 | 276 |
| MS.gene88149.t1 | AT4G09940 | 44.625 | 307 | 164 | 5 | 21 | 324 | 39 | 342 | 4.08e-89 | 273 |
| MS.gene88149.t1 | AT4G09940 | 44.625 | 307 | 164 | 5 | 21 | 324 | 82 | 385 | 2.01e-88 | 273 |
| MS.gene88149.t1 | AT1G33950 | 48.529 | 272 | 139 | 1 | 25 | 296 | 12 | 282 | 7.55e-87 | 264 |
| MS.gene88149.t1 | AT1G33900 | 45.066 | 304 | 156 | 4 | 25 | 327 | 14 | 307 | 1.59e-86 | 264 |
| MS.gene88149.t1 | AT4G09950 | 43.363 | 339 | 184 | 6 | 13 | 346 | 1 | 336 | 2.68e-85 | 261 |
| MS.gene88149.t1 | AT1G33930 | 45.833 | 288 | 146 | 2 | 9 | 296 | 24 | 301 | 1.39e-84 | 259 |
| MS.gene88149.t1 | AT1G33950 | 48.162 | 272 | 134 | 3 | 25 | 296 | 12 | 276 | 5.92e-81 | 249 |
| MS.gene88149.t1 | AT2G26820 | 45.520 | 279 | 147 | 3 | 30 | 307 | 6 | 280 | 7.27e-78 | 243 |
| MS.gene88149.t1 | AT2G26820 | 43.689 | 309 | 168 | 4 | 30 | 336 | 6 | 310 | 1.28e-77 | 243 |
| MS.gene88149.t1 | AT2G26820 | 43.689 | 309 | 168 | 4 | 30 | 336 | 6 | 310 | 3.24e-76 | 242 |
| MS.gene88149.t1 | AT2G26820 | 45.520 | 279 | 147 | 3 | 30 | 307 | 6 | 280 | 4.39e-76 | 241 |
| MS.gene88149.t1 | AT4G09930 | 40.058 | 347 | 194 | 8 | 2 | 346 | 1 | 335 | 1.14e-75 | 236 |
| MS.gene88149.t1 | AT1G33910 | 47.273 | 275 | 134 | 6 | 25 | 296 | 8 | 274 | 7.88e-73 | 228 |
| MS.gene88149.t1 | AT1G33890 | 43.284 | 268 | 151 | 1 | 29 | 296 | 13 | 279 | 7.17e-72 | 227 |
| MS.gene88149.t1 | AT1G33890 | 43.284 | 268 | 151 | 1 | 29 | 296 | 13 | 279 | 7.17e-72 | 227 |
| MS.gene88149.t1 | AT1G33830 | 50.980 | 204 | 100 | 0 | 32 | 235 | 11 | 214 | 2.60e-68 | 214 |
| MS.gene88149.t1 | AT1G33870 | 42.570 | 249 | 141 | 1 | 54 | 302 | 1 | 247 | 5.01e-66 | 209 |
| MS.gene88149.t1 | AT4G09950 | 41.481 | 270 | 150 | 6 | 82 | 346 | 7 | 273 | 6.27e-57 | 186 |
| MS.gene88149.t1 | AT1G33880 | 41.063 | 207 | 116 | 2 | 29 | 235 | 23 | 223 | 1.29e-55 | 181 |
| MS.gene88149.t1 | AT1G33880 | 41.063 | 207 | 116 | 2 | 29 | 235 | 23 | 223 | 1.29e-55 | 181 |
Find 78 sgRNAs with CRISPR-Local
Find 268 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCAGCTTGCAGACTTTATT+TGG | 0.123021 | 4.3:-68972161 | MS.gene88149:CDS |
| TCAACCGGTAATAGTATTAT+TGG | 0.193324 | 4.3:-68973039 | MS.gene88149:CDS |
| TCTGCTGGATCTGAGTTTAT+TGG | 0.235468 | 4.3:-68972290 | MS.gene88149:CDS |
| GATACACTTGCCGATTATTT+AGG | 0.253738 | 4.3:-68972074 | MS.gene88149:CDS |
| CTGCTGGATCTGAGTTTATT+GGG | 0.278196 | 4.3:-68972289 | MS.gene88149:CDS |
| GCAAATAACTCATGTGTATA+GGG | 0.291498 | 4.3:+68971284 | None:intergenic |
| TGAAGCTCGGACAGTGGTTT+TGG | 0.303565 | 4.3:-68973088 | MS.gene88149:CDS |
| TTTCCCAATAATACTATTAC+CGG | 0.320204 | 4.3:+68973035 | None:intergenic |
| GAAGTTATGTTGAAGATGAT+TGG | 0.342560 | 4.3:-68973158 | MS.gene88149:CDS |
| AGTTGAAGGTGTCAACTAAA+AGG | 0.357458 | 4.3:-68969458 | MS.gene88149:CDS |
| TAATAGTATTATTGGGAAAC+AGG | 0.362344 | 4.3:-68973031 | MS.gene88149:CDS |
| TGCAAATAACTCATGTGTAT+AGG | 0.363264 | 4.3:+68971283 | None:intergenic |
| CAACCGGTAATAGTATTATT+GGG | 0.369992 | 4.3:-68973038 | MS.gene88149:CDS |
| GCAAAGAAAGATTGATTCCT+TGG | 0.383767 | 4.3:-68971139 | MS.gene88149:CDS |
| GTAGATTGAGTCAAAGTTGA+AGG | 0.399631 | 4.3:-68969472 | MS.gene88149:intron |
| AAGTTATGTTGAAGATGATT+GGG | 0.420774 | 4.3:-68973157 | MS.gene88149:CDS |
| ACATTCACCGCCTAAATAAT+CGG | 0.431303 | 4.3:+68972064 | None:intergenic |
| CTCCGCAAGCGAGGTGGTAA+TGG | 0.433495 | 4.3:-68969306 | MS.gene88149:CDS |
| ATGAACATCATTAGCTGATC+CGG | 0.437986 | 4.3:+68973122 | None:intergenic |
| TTGGTTGGCCGTACAGGCAA+TGG | 0.440299 | 4.3:-68973069 | MS.gene88149:CDS |
| GGATTATTTGAAGTTTCTGC+TGG | 0.441692 | 4.3:-68972305 | MS.gene88149:CDS |
| AGGTCGAGGGCTAGCTCGTC+CGG | 0.446801 | 4.3:-68973003 | MS.gene88149:CDS |
| CTATATGATCGTGGTCTTCA+CGG | 0.451497 | 4.3:-68972123 | MS.gene88149:CDS |
| GTGGTCTTCACGGGAGGGGA+TGG | 0.461079 | 4.3:-68972113 | MS.gene88149:CDS |
| AGCAGAAGACAATGCAAAGT+TGG | 0.468961 | 4.3:-68969394 | MS.gene88149:CDS |
| CAGTGATTGGAATTTATGAT+GGG | 0.469087 | 4.3:-68973183 | None:intergenic |
| TGAGTTATTTGCAGAACTAA+AGG | 0.471603 | 4.3:-68971273 | MS.gene88149:intron |
| TGCATTGACTTTGCCAAGGA+TGG | 0.487528 | 4.3:-68972251 | MS.gene88149:CDS |
| GGCAATGGGAAAAGTTCAAC+CGG | 0.488294 | 4.3:-68973054 | MS.gene88149:CDS |
| GATTGGGAGTTAGCGTCATC+CGG | 0.490210 | 4.3:-68973141 | MS.gene88149:CDS |
| TGGTTGGCCGTACAGGCAAT+GGG | 0.494616 | 4.3:-68973068 | MS.gene88149:CDS |
| AACGATTCCCACACAAAGAC+AGG | 0.496744 | 4.3:+68971411 | None:intergenic |
| AGAAAGATTGATTCCTTGGA+AGG | 0.503880 | 4.3:-68971135 | MS.gene88149:CDS |
| GAGCAATGGAACTGCATAGC+GGG | 0.506391 | 4.3:-68971161 | MS.gene88149:CDS |
| TGAATGTCCAGAGTCTTTGA+AGG | 0.507892 | 4.3:-68972048 | MS.gene88149:intron |
| AAGGACGAAAAGAAGCGATC+TGG | 0.518274 | 4.3:-68971365 | MS.gene88149:CDS |
| GTCAATGTTATTGACACTCC+AGG | 0.521632 | 4.3:-68972928 | MS.gene88149:intron |
| TATATGATCGTGGTCTTCAC+GGG | 0.533417 | 4.3:-68972122 | MS.gene88149:CDS |
| GGGGATGGACTAGAAGATGA+TGG | 0.534525 | 4.3:-68972098 | MS.gene88149:CDS |
| GAAGGTGTCAACTAAAAGGC+TGG | 0.535970 | 4.3:-68969454 | MS.gene88149:CDS |
| TGGTGTTATCTGTCAGATCA+CGG | 0.542518 | 4.3:-68972211 | MS.gene88149:CDS |
| GTGATTGGAATTTATGATGG+GGG | 0.545427 | 4.3:-68973181 | None:intergenic |
| GATCGTGGTCTTCACGGGAG+GGG | 0.549312 | 4.3:-68972117 | MS.gene88149:CDS |
| GATGGCATGGATACCATCCT+TGG | 0.552483 | 4.3:+68972238 | None:intergenic |
| AACCATTACCACCTCGCTTG+CGG | 0.557199 | 4.3:+68969304 | None:intergenic |
| TGATAGTATCACAGAATGGT+GGG | 0.562437 | 4.3:-68971310 | MS.gene88149:CDS |
| ATATTTCAGCTAATGAAGCT+CGG | 0.568952 | 4.3:-68973101 | MS.gene88149:CDS |
| AGCAGCATGCATTTCACAAG+AGG | 0.571620 | 4.3:+68972972 | None:intergenic |
| TGATTGGAATTTATGATGGG+GGG | 0.573203 | 4.3:-68973180 | None:intergenic |
| AGCTAATGAAGCTCGGACAG+TGG | 0.575504 | 4.3:-68973094 | MS.gene88149:CDS |
| GACAGATAACACCACAAGGA+TGG | 0.579932 | 4.3:+68972220 | None:intergenic |
| ACAATGAAATACGAAAACTA+AGG | 0.582337 | 4.3:-68969356 | MS.gene88149:CDS |
| TTGATTGCAGAAAGGAGCAA+TGG | 0.584225 | 4.3:-68971175 | MS.gene88149:intron |
| CATGAAGAACTCCGCAAGCG+AGG | 0.587165 | 4.3:-68969315 | MS.gene88149:CDS |
| TGATCGTGGTCTTCACGGGA+GGG | 0.592418 | 4.3:-68972118 | MS.gene88149:CDS |
| TTGATAGTATCACAGAATGG+TGG | 0.594891 | 4.3:-68971311 | MS.gene88149:CDS |
| AGCGCTACTAGATCATAGAA+TGG | 0.596677 | 4.3:+68969278 | None:intergenic |
| ATAACACCACAAGGATGGCA+TGG | 0.596816 | 4.3:+68972225 | None:intergenic |
| GCTAAAACATATTACTGAGA+CGG | 0.608958 | 4.3:-68971052 | MS.gene88149:intron |
| ATGATCGTGGTCTTCACGGG+AGG | 0.612755 | 4.3:-68972119 | MS.gene88149:CDS |
| TAGCAAATCCTGTCTTTGTG+TGG | 0.618740 | 4.3:-68971419 | MS.gene88149:CDS |
| ACACTTGCCGATTATTTAGG+CGG | 0.621336 | 4.3:-68972071 | MS.gene88149:CDS |
| CAAGTGCATTGACTTTGCCA+AGG | 0.621929 | 4.3:-68972255 | MS.gene88149:CDS |
| AAAACTAAGGAAGAATCTTG+AGG | 0.621998 | 4.3:-68969343 | MS.gene88149:CDS |
| AGCAAATCCTGTCTTTGTGT+GGG | 0.622178 | 4.3:-68971418 | MS.gene88149:CDS |
| AGCTTGATAGTATCACAGAA+TGG | 0.625086 | 4.3:-68971314 | MS.gene88149:CDS |
| CATGCTGCTGAGTTGAGTGA+TGG | 0.628624 | 4.3:-68972958 | MS.gene88149:CDS |
| AGTGATTGGAATTTATGATG+GGG | 0.631678 | 4.3:-68973182 | None:intergenic |
| TTCACAAGAGGAAGTGACAC+CGG | 0.638052 | 4.3:+68972984 | None:intergenic |
| GCATATGCAGCAAACATACG+AGG | 0.641389 | 4.3:-68971079 | MS.gene88149:CDS |
| TGGTATCCATGCCATCCTTG+TGG | 0.652793 | 4.3:-68972231 | MS.gene88149:CDS |
| GATTGTTGACTATATGATCG+TGG | 0.655429 | 4.3:-68972132 | MS.gene88149:CDS |
| TGTCAGATCACGGTTTAGCG+AGG | 0.662423 | 4.3:-68972201 | MS.gene88149:CDS |
| GAAGAACTCCGCAAGCGAGG+TGG | 0.663684 | 4.3:-68969312 | MS.gene88149:CDS |
| ATCTGACAGATAACACCACA+AGG | 0.690950 | 4.3:+68972216 | None:intergenic |
| ACTAAGGAAGAATCTTGAGG+AGG | 0.695240 | 4.3:-68969340 | MS.gene88149:CDS |
| TCTCTTTGACAACAAGACCA+AGG | 0.701907 | 4.3:-68971384 | MS.gene88149:CDS |
| GGAGCAATGGAACTGCATAG+CGG | 0.743379 | 4.3:-68971162 | MS.gene88149:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAGAATAAAAACATAAATA+TGG | + | chr4.3:68970477-68970496 | None:intergenic | 10.0% |
| !! | TAACAAAATTAATTTACTTT+GGG | - | chr4.3:68972336-68972355 | MS.gene88149:intron | 10.0% |
| !! | TAGAATAAAAACATAAATAT+GGG | + | chr4.3:68970476-68970495 | None:intergenic | 10.0% |
| !! | TTATTATTACTCTTAATAAA+AGG | - | chr4.3:68970561-68970580 | MS.gene88149:intron | 10.0% |
| !! | TTTAATAAGGAAAATAATTA+TGG | - | chr4.3:68972021-68972040 | MS.gene88149:intron | 10.0% |
| !!! | AAAACATTGTTAATTTTTTA+GGG | - | chr4.3:68969715-68969734 | MS.gene88149:intron | 10.0% |
| !!! | GTTTTAGATTTTATAAAAAA+TGG | - | chr4.3:68972694-68972713 | MS.gene88149:intron | 10.0% |
| !!! | TAAAACATTGTTAATTTTTT+AGG | - | chr4.3:68969714-68969733 | MS.gene88149:intron | 10.0% |
| !!! | TACTTTTCTTTTTTAAATTA+CGG | + | chr4.3:68970924-68970943 | None:intergenic | 10.0% |
| !! | AATATTAGGAATTAAGTAAT+GGG | - | chr4.3:68971723-68971742 | MS.gene88149:intron | 15.0% |
| !! | CATAATAATATATGTGAAAA+AGG | + | chr4.3:68972820-68972839 | None:intergenic | 15.0% |
| !! | CTAACAAAATTAATTTACTT+TGG | - | chr4.3:68972335-68972354 | MS.gene88149:intron | 15.0% |
| !! | TTAAATATCTCAATTATTAC+CGG | - | chr4.3:68969611-68969630 | MS.gene88149:intron | 15.0% |
| !!! | ATTAACAATGTTTTATTTCT+AGG | + | chr4.3:68969709-68969728 | None:intergenic | 15.0% |
| !!! | ATTCAATTTTCACATTAATT+AGG | + | chr4.3:68972313-68972332 | None:intergenic | 15.0% |
| !!! | TAATTTTGTTGATCTTTAAT+TGG | - | chr4.3:68971002-68971021 | MS.gene88149:intron | 15.0% |
| !!! | TTAACAATGTTTTATTTCTA+GGG | + | chr4.3:68969708-68969727 | None:intergenic | 15.0% |
| !!! | TTATTTTCCTTATTAAAAGT+TGG | + | chr4.3:68972018-68972037 | None:intergenic | 15.0% |
| !! | AATAAGGAAAATAATTATGG+AGG | - | chr4.3:68972024-68972043 | MS.gene88149:intron | 20.0% |
| !! | ATAAGGAAAATAATTATGGA+GGG | - | chr4.3:68972025-68972044 | MS.gene88149:intron | 20.0% |
| !! | CAATATTAGGAATTAAGTAA+TGG | - | chr4.3:68971722-68971741 | MS.gene88149:intron | 20.0% |
| !! | GTTCAAATATAATCTATTCT+TGG | + | chr4.3:68972563-68972582 | None:intergenic | 20.0% |
| !! | TATATTACTTCAAAAACACT+TGG | + | chr4.3:68970849-68970868 | None:intergenic | 20.0% |
| !! | TTGAAAAATATAGACACAAA+AGG | + | chr4.3:68971434-68971453 | None:intergenic | 20.0% |
| !!! | AATTTTCACATTAATTAGGA+TGG | + | chr4.3:68972309-68972328 | None:intergenic | 20.0% |
| !!! | ATATTCTTTTTCCATTTCAT+GGG | - | chr4.3:68971751-68971770 | MS.gene88149:intron | 20.0% |
| !!! | TAGATTTTATAAAAAATGGG+AGG | - | chr4.3:68972698-68972717 | MS.gene88149:intron | 20.0% |
| !!! | TATATTCTTTTTCCATTTCA+TGG | - | chr4.3:68971750-68971769 | MS.gene88149:intron | 20.0% |
| !!! | TTTGGTATTTTAAAAAGTTG+TGG | - | chr4.3:68971822-68971841 | MS.gene88149:intron | 20.0% |
| ! | AAGTTATGTTGAAGATGATT+GGG | - | chr4.3:68969301-68969320 | MS.gene88149:CDS | 25.0% |
| ! | ACAATGAAATACGAAAACTA+AGG | - | chr4.3:68973102-68973121 | MS.gene88149:CDS | 25.0% |
| ! | ATCTCCTTTGTATATGTAAA+GGG | + | chr4.3:68969891-68969910 | None:intergenic | 25.0% |
| ! | ATGCTGAGAATAAAAATCAT+CGG | + | chr4.3:68969970-68969989 | None:intergenic | 25.0% |
| ! | ATGTCTATTACAAATTCACA+AGG | + | chr4.3:68971792-68971811 | None:intergenic | 25.0% |
| ! | ATTAATTGTCAAACCTAGTT+TGG | - | chr4.3:68972215-68972234 | MS.gene88149:CDS | 25.0% |
| ! | CAAAATCAAACATTGTAAGA+GGG | + | chr4.3:68972744-68972763 | None:intergenic | 25.0% |
| ! | CAATTTCTACAAAGTAGAAT+GGG | - | chr4.3:68972615-68972634 | MS.gene88149:intron | 25.0% |
| ! | TAACACATATTACAAACTCA+TGG | + | chr4.3:68972466-68972485 | None:intergenic | 25.0% |
| ! | TAATAGTATTATTGGGAAAC+AGG | - | chr4.3:68969427-68969446 | MS.gene88149:CDS | 25.0% |
| ! | TAGTTATTTGCAGTTTCTAT+AGG | - | chr4.3:68972085-68972104 | MS.gene88149:CDS | 25.0% |
| ! | TATGTGTTCGATCAATTATA+TGG | - | chr4.3:68972959-68972978 | MS.gene88149:CDS | 25.0% |
| ! | TTAGGATTTCAAAAAGCTTA+CGG | - | chr4.3:68971875-68971894 | MS.gene88149:intron | 25.0% |
| ! | TTTCATGTTTCTTACAAGAT+TGG | - | chr4.3:68969914-68969933 | MS.gene88149:intron | 25.0% |
| ! | TTTCCCAATAATACTATTAC+CGG | + | chr4.3:68969426-68969445 | None:intergenic | 25.0% |
| !! | ATAATCCTGTAAAACTTTTC+AGG | + | chr4.3:68970140-68970159 | None:intergenic | 25.0% |
| !! | CAATCTTGTTTCTTAAATCT+TGG | - | chr4.3:68971229-68971248 | MS.gene88149:intron | 25.0% |
| !! | GCTTGAATATCTAGAATTAT+AGG | - | chr4.3:68970696-68970715 | MS.gene88149:intron | 25.0% |
| !! | TTCATATATTGATTGCAGAA+AGG | - | chr4.3:68971275-68971294 | MS.gene88149:CDS | 25.0% |
| !! | TTTAACCTGAAAAGTTTTAC+AGG | - | chr4.3:68970132-68970151 | MS.gene88149:intron | 25.0% |
| !!! | AAGTATTGAAATGTGCATTA+GGG | - | chr4.3:68972396-68972415 | MS.gene88149:intron | 25.0% |
| !!! | AGTCTTCTTACACATTTTTT+TGG | - | chr4.3:68970646-68970665 | MS.gene88149:intron | 25.0% |
| !!! | TGTTTCCATTTTTGTTTGTA+CGG | - | chr4.3:68971991-68972010 | MS.gene88149:intron | 25.0% |
| !!! | TTTTTCTTTAAGGGTGTTTT+TGG | + | chr4.3:68970978-68970997 | None:intergenic | 25.0% |
| AAAACTAAGGAAGAATCTTG+AGG | - | chr4.3:68973115-68973134 | MS.gene88149:CDS | 30.0% | |
| AAGACCCTTTACATATACAA+AGG | - | chr4.3:68969884-68969903 | MS.gene88149:intron | 30.0% | |
| ATAAAAACCTTCAAAGACTC+TGG | + | chr4.3:68970420-68970439 | None:intergenic | 30.0% | |
| ATATTTCAGCTAATGAAGCT+CGG | - | chr4.3:68969357-68969376 | MS.gene88149:CDS | 30.0% | |
| ATCGAACACATAAATACTAG+GGG | + | chr4.3:68972951-68972970 | None:intergenic | 30.0% | |
| CAACCGGTAATAGTATTATT+GGG | - | chr4.3:68969420-68969439 | MS.gene88149:CDS | 30.0% | |
| CAAGTAGATCTTGATCAAAT+GGG | - | chr4.3:68972185-68972204 | MS.gene88149:CDS | 30.0% | |
| CATAACTCAAACAAAACCAT+AGG | + | chr4.3:68970050-68970069 | None:intergenic | 30.0% | |
| CATCTCCTTTGTATATGTAA+AGG | + | chr4.3:68969892-68969911 | None:intergenic | 30.0% | |
| CATCTTGATCATAAAGATCA+AGG | - | chr4.3:68972243-68972262 | MS.gene88149:CDS | 30.0% | |
| CCAAAATCAAACATTGTAAG+AGG | + | chr4.3:68972745-68972764 | None:intergenic | 30.0% | |
| CTTAAAGCTCGTTCAATATT+AGG | - | chr4.3:68971709-68971728 | MS.gene88149:intron | 30.0% | |
| GAAGTTATGTTGAAGATGAT+TGG | - | chr4.3:68969300-68969319 | MS.gene88149:CDS | 30.0% | |
| GATCGAACACATAAATACTA+GGG | + | chr4.3:68972952-68972971 | None:intergenic | 30.0% | |
| GCAAATAACTCATGTGTATA+GGG | + | chr4.3:68971177-68971196 | None:intergenic | 30.0% | |
| GCAATTTCTACAAAGTAGAA+TGG | - | chr4.3:68972614-68972633 | MS.gene88149:intron | 30.0% | |
| GCTAAAACATATTACTGAGA+CGG | - | chr4.3:68971406-68971425 | MS.gene88149:CDS | 30.0% | |
| GTATATGTAAAGGGTCTTTA+AGG | + | chr4.3:68969882-68969901 | None:intergenic | 30.0% | |
| TATATACATGCATTTCTGCA+TGG | - | chr4.3:68971550-68971569 | MS.gene88149:intron | 30.0% | |
| TATGTGTTATGAAAACTGCA+AGG | - | chr4.3:68972477-68972496 | MS.gene88149:intron | 30.0% | |
| TATTACAAACTCATGGAATC+AGG | + | chr4.3:68972459-68972478 | None:intergenic | 30.0% | |
| TCAACCGGTAATAGTATTAT+TGG | - | chr4.3:68969419-68969438 | MS.gene88149:CDS | 30.0% | |
| TCTGTCATGTGAATATTTAG+AGG | + | chr4.3:68972892-68972911 | None:intergenic | 30.0% | |
| TGAAAAAGGAAACTGTTTGT+TGG | + | chr4.3:68972806-68972825 | None:intergenic | 30.0% | |
| TGAGTTATTTGCAGAACTAA+AGG | - | chr4.3:68971185-68971204 | MS.gene88149:intron | 30.0% | |
| TGATCGAACACATAAATACT+AGG | + | chr4.3:68972953-68972972 | None:intergenic | 30.0% | |
| TGCAAATAACTCATGTGTAT+AGG | + | chr4.3:68971178-68971197 | None:intergenic | 30.0% | |
| ! | TATTCTCAGCATGAAGTTTT+TGG | - | chr4.3:68969978-68969997 | MS.gene88149:intron | 30.0% |
| ! | TTATTGGGAAACAGGTTTTT+AGG | - | chr4.3:68969435-68969454 | MS.gene88149:CDS | 30.0% |
| ! | TTGGATTGAGGATTTTTGAA+GGG | + | chr4.3:68970959-68970978 | None:intergenic | 30.0% |
| ! | TTTGGATTGAGGATTTTTGA+AGG | + | chr4.3:68970960-68970979 | None:intergenic | 30.0% |
| !! | AGATCTACTTGCATTTTGAT+CGG | + | chr4.3:68972176-68972195 | None:intergenic | 30.0% |
| !! | CAAACTTTTCAAGAAGTAGA+AGG | + | chr4.3:68970106-68970125 | None:intergenic | 30.0% |
| !! | CCTCTTACAATGTTTGATTT+TGG | - | chr4.3:68972742-68972761 | MS.gene88149:intron | 30.0% |
| !! | GAAGTATTGAAATGTGCATT+AGG | - | chr4.3:68972395-68972414 | MS.gene88149:intron | 30.0% |
| !! | TAATTTACTTTGGGTTGAGA+TGG | - | chr4.3:68972345-68972364 | MS.gene88149:intron | 30.0% |
| ACATTCACCGCCTAAATAAT+CGG | + | chr4.3:68970397-68970416 | None:intergenic | 35.0% | |
| ACTTCACACCATACCATAAA+TGG | + | chr4.3:68972380-68972399 | None:intergenic | 35.0% | |
| ATAGACATTAAGCGTGTGTT+TGG | - | chr4.3:68971804-68971823 | MS.gene88149:intron | 35.0% | |
| ATGAACATCATTAGCTGATC+CGG | + | chr4.3:68969339-68969358 | None:intergenic | 35.0% | |
| ATTAGTCGAGTTTAAACCGA+GGG | - | chr4.3:68969826-68969845 | MS.gene88149:intron | 35.0% | |
| CACATTAATTAGGATGGAGT+TGG | + | chr4.3:68972303-68972322 | None:intergenic | 35.0% | |
| CTAGTGATTCGTATCACTAA+AGG | + | chr4.3:68970624-68970643 | None:intergenic | 35.0% | |
| CTTCACACCATACCATAAAT+GGG | + | chr4.3:68972379-68972398 | None:intergenic | 35.0% | |
| GCAAGTAGATCTTGATCAAA+TGG | - | chr4.3:68972184-68972203 | MS.gene88149:CDS | 35.0% | |
| GGGTAGAATAAGGAAAATTG+AGG | - | chr4.3:68972502-68972521 | MS.gene88149:intron | 35.0% | |
| GTAGATTGAGTCAAAGTTGA+AGG | - | chr4.3:68972986-68973005 | MS.gene88149:CDS | 35.0% | |
| GTTATGAAAACTGCAAGGAT+GGG | - | chr4.3:68972482-68972501 | MS.gene88149:intron | 35.0% | |
| GTTATTTGCAGAACTAAAGG+TGG | - | chr4.3:68971188-68971207 | MS.gene88149:intron | 35.0% | |
| TCAAAAAGCTTACGGTGAAA+GGG | - | chr4.3:68971883-68971902 | MS.gene88149:intron | 35.0% | |
| TCAATGCTGTTAGCTATTAC+TGG | - | chr4.3:68971651-68971670 | MS.gene88149:intron | 35.0% | |
| TGAGAGGAAAAAAGAACTTG+TGG | - | chr4.3:68972768-68972787 | MS.gene88149:intron | 35.0% | |
| TGATAGTATCACAGAATGGT+GGG | - | chr4.3:68971148-68971167 | MS.gene88149:CDS | 35.0% | |
| TGATTCGTATCACTAAAGGA+GGG | + | chr4.3:68970620-68970639 | None:intergenic | 35.0% | |
| TGTTATGAAAACTGCAAGGA+TGG | - | chr4.3:68972481-68972500 | MS.gene88149:intron | 35.0% | |
| TTACAAATTCACAAGGCCAT+TGG | + | chr4.3:68971785-68971804 | None:intergenic | 35.0% | |
| TTATAGGAAAGTCTATCTGC+TGG | - | chr4.3:68970712-68970731 | MS.gene88149:intron | 35.0% | |
| TTCAAAAAGCTTACGGTGAA+AGG | - | chr4.3:68971882-68971901 | MS.gene88149:intron | 35.0% | |
| TTGGTCCGTACAAACAAAAA+TGG | + | chr4.3:68971999-68972018 | None:intergenic | 35.0% | |
| ! | AGAAAGATTGATTCCTTGGA+AGG | - | chr4.3:68971323-68971342 | MS.gene88149:CDS | 35.0% |
| ! | AGCTTGATAGTATCACAGAA+TGG | - | chr4.3:68971144-68971163 | MS.gene88149:CDS | 35.0% |
| ! | CAGCATTGAATGCAACTAAT+TGG | + | chr4.3:68971640-68971659 | None:intergenic | 35.0% |
| ! | GATACACTTGCCGATTATTT+AGG | - | chr4.3:68970384-68970403 | MS.gene88149:intron | 35.0% |
| ! | GATTGTTGACTATATGATCG+TGG | - | chr4.3:68970326-68970345 | MS.gene88149:intron | 35.0% |
| ! | GCAAAGAAAGATTGATTCCT+TGG | - | chr4.3:68971319-68971338 | MS.gene88149:CDS | 35.0% |
| ! | GGATTATTTGAAGTTTCTGC+TGG | - | chr4.3:68970153-68970172 | MS.gene88149:intron | 35.0% |
| ! | GTACGGACCAACTTTTAATA+AGG | - | chr4.3:68972008-68972027 | MS.gene88149:intron | 35.0% |
| ! | TTCTTTTGAATGTCCTTCCA+AGG | + | chr4.3:68971339-68971358 | None:intergenic | 35.0% |
| ! | TTGATAGTATCACAGAATGG+TGG | - | chr4.3:68971147-68971166 | MS.gene88149:CDS | 35.0% |
| ! | TTTGGTATTCGTGTTTCTGT+TGG | - | chr4.3:68969647-68969666 | MS.gene88149:intron | 35.0% |
| ! | TTTTCCATTTCATGGGTCAT+AGG | - | chr4.3:68971758-68971777 | MS.gene88149:intron | 35.0% |
| !! | AGTTGAAGGTGTCAACTAAA+AGG | - | chr4.3:68973000-68973019 | MS.gene88149:CDS | 35.0% |
| !! | TGGATTGAGGATTTTTGAAG+GGG | + | chr4.3:68970958-68970977 | None:intergenic | 35.0% |
| !! | TGTTTCTGTTGGTGATTTGT+AGG | - | chr4.3:68969658-68969677 | MS.gene88149:intron | 35.0% |
| !! | TGTTTGATTTTGGACTTGAG+AGG | - | chr4.3:68972752-68972771 | MS.gene88149:intron | 35.0% |
| !!! | GTTTTGACTTGATGTCACTT+AGG | - | chr4.3:68971675-68971694 | MS.gene88149:intron | 35.0% |
| !!! | TTAAGGGTGTTTTTGGATTG+AGG | + | chr4.3:68970971-68970990 | None:intergenic | 35.0% |
| AAGAGGACCCATTTATGGTA+TGG | - | chr4.3:68972369-68972388 | MS.gene88149:intron | 40.0% | |
| ACCAAAAACAACACAGACAC+CGG | + | chr4.3:68969633-68969652 | None:intergenic | 40.0% | |
| ACGGACACCAAAAACGAAAT+GGG | + | chr4.3:68969759-68969778 | None:intergenic | 40.0% | |
| ACTAAGGAAGAATCTTGAGG+AGG | - | chr4.3:68973118-68973137 | MS.gene88149:CDS | 40.0% | |
| AGCAAATCCTGTCTTTGTGT+GGG | - | chr4.3:68971040-68971059 | MS.gene88149:intron | 40.0% | |
| AGCAGAAGACAATGCAAAGT+TGG | - | chr4.3:68973064-68973083 | MS.gene88149:CDS | 40.0% | |
| AGGTAAATACACGCCTACAT+AGG | - | chr4.3:68969550-68969569 | MS.gene88149:intron | 40.0% | |
| ATCTGACAGATAACACCACA+AGG | + | chr4.3:68970245-68970264 | None:intergenic | 40.0% | |
| ATGGTAAGAGGACCCATTTA+TGG | - | chr4.3:68972364-68972383 | MS.gene88149:intron | 40.0% | |
| ATTTGCAGAACTAAAGGTGG+AGG | - | chr4.3:68971191-68971210 | MS.gene88149:intron | 40.0% | |
| CAAAAAGCTTACGGTGAAAG+GGG | - | chr4.3:68971884-68971903 | MS.gene88149:intron | 40.0% | |
| CAAGGTAGTGATGTTCTATC+GGG | - | chr4.3:68971916-68971935 | MS.gene88149:intron | 40.0% | |
| CATCCTACAAAACACAGACA+CGG | + | chr4.3:68969784-68969803 | None:intergenic | 40.0% | |
| CCTGAAACAAGTAACACCTA+TGG | - | chr4.3:68970031-68970050 | MS.gene88149:intron | 40.0% | |
| CTATATGATCGTGGTCTTCA+CGG | - | chr4.3:68970335-68970354 | MS.gene88149:intron | 40.0% | |
| CTGCTGGATCTGAGTTTATT+GGG | - | chr4.3:68970169-68970188 | MS.gene88149:intron | 40.0% | |
| GAAGCACGTGTCTATTTAGT+GGG | + | chr4.3:68971952-68971971 | None:intergenic | 40.0% | |
| GCAAGGTAGTGATGTTCTAT+CGG | - | chr4.3:68971915-68971934 | MS.gene88149:intron | 40.0% | |
| GTCAATGTTATTGACACTCC+AGG | - | chr4.3:68969530-68969549 | MS.gene88149:intron | 40.0% | |
| GTGATTCGTATCACTAAAGG+AGG | + | chr4.3:68970621-68970640 | None:intergenic | 40.0% | |
| GTTGTTCTATGCTTGAACTC+TGG | - | chr4.3:68972858-68972877 | MS.gene88149:intron | 40.0% | |
| TAGCAAATCCTGTCTTTGTG+TGG | - | chr4.3:68971039-68971058 | MS.gene88149:intron | 40.0% | |
| TATATGATCGTGGTCTTCAC+GGG | - | chr4.3:68970336-68970355 | MS.gene88149:intron | 40.0% | |
| TATGGAGGGTTTCTTTCACA+AGG | - | chr4.3:68972039-68972058 | MS.gene88149:intron | 40.0% | |
| TATGTAGGCGTGTATTTACC+TGG | + | chr4.3:68969551-68969570 | None:intergenic | 40.0% | |
| TCAAGATGTGATGCCAAACT+AGG | + | chr4.3:68972231-68972250 | None:intergenic | 40.0% | |
| TCTCTTTGACAACAAGACCA+AGG | - | chr4.3:68971074-68971093 | MS.gene88149:CDS | 40.0% | |
| TCTGCTGGATCTGAGTTTAT+TGG | - | chr4.3:68970168-68970187 | MS.gene88149:intron | 40.0% | |
| TGAATGTCCAGAGTCTTTGA+AGG | - | chr4.3:68970410-68970429 | MS.gene88149:intron | 40.0% | |
| TGACTGTCAATAGCCTATGT+AGG | + | chr4.3:68969566-68969585 | None:intergenic | 40.0% | |
| TGCATTAGGGATCAAAATGC+AGG | - | chr4.3:68972409-68972428 | MS.gene88149:intron | 40.0% | |
| TGTGTTTGGATTGAGGGTTT+AGG | - | chr4.3:68970745-68970764 | MS.gene88149:intron | 40.0% | |
| TTGATTGCAGAAAGGAGCAA+TGG | - | chr4.3:68971283-68971302 | MS.gene88149:CDS | 40.0% | |
| TTGCAGTTTCTATAGGAGTC+AGG | - | chr4.3:68972092-68972111 | MS.gene88149:CDS | 40.0% | |
| TTGGTAGGGGAAATTGTACT+GGG | - | chr4.3:68972127-68972146 | MS.gene88149:CDS | 40.0% | |
| TTTGGATTGAGGGTTTAGGA+GGG | - | chr4.3:68970749-68970768 | MS.gene88149:intron | 40.0% | |
| ! | AACTTTTCCCATTGCCTGTA+CGG | + | chr4.3:68969400-68969419 | None:intergenic | 40.0% |
| ! | ACACTTGCCGATTATTTAGG+CGG | - | chr4.3:68970387-68970406 | MS.gene88149:intron | 40.0% |
| ! | GATTAGTCGAGTTTAAACCG+AGG | - | chr4.3:68969825-68969844 | MS.gene88149:intron | 40.0% |
| ! | GTGTCTATTTAGTGGGTGTT+TGG | + | chr4.3:68971945-68971964 | None:intergenic | 40.0% |
| ! | TAAGCACCCCATTTCGTTTT+TGG | - | chr4.3:68969749-68969768 | MS.gene88149:intron | 40.0% |
| ! | TAGACACGTGCTTCCATTTT+TGG | - | chr4.3:68971958-68971977 | MS.gene88149:intron | 40.0% |
| ! | TCTATAGGAGTCAGGACTTT+TGG | - | chr4.3:68972100-68972119 | MS.gene88149:CDS | 40.0% |
| !! | AGACACGTGCTTCCATTTTT+GGG | - | chr4.3:68971959-68971978 | MS.gene88149:intron | 40.0% |
| !! | ATTGAGGATTTTTGAAGGGG+AGG | + | chr4.3:68970955-68970974 | None:intergenic | 40.0% |
| !! | CCATAGGTGTTACTTGTTTC+AGG | + | chr4.3:68970034-68970053 | None:intergenic | 40.0% |
| !! | TGGTGTTATCTGTCAGATCA+CGG | - | chr4.3:68970247-68970266 | MS.gene88149:intron | 40.0% |
| !! | TTGAGGATTTTTGAAGGGGA+GGG | + | chr4.3:68970954-68970973 | None:intergenic | 40.0% |
| !! | TTGGGTTGAAGCTAACACTT+AGG | - | chr4.3:68971857-68971876 | MS.gene88149:intron | 40.0% |
| !!! | GAAACAGGTTTTTAGGTCGA+GGG | - | chr4.3:68969442-68969461 | MS.gene88149:CDS | 40.0% |
| AACGATTCCCACACAAAGAC+AGG | + | chr4.3:68971050-68971069 | None:intergenic | 45.0% | |
| AAGGACGAAAAGAAGCGATC+TGG | - | chr4.3:68971093-68971112 | MS.gene88149:CDS | 45.0% | |
| AAGTTCCGACTCTTGTTAGG+TGG | - | chr4.3:68972528-68972547 | MS.gene88149:intron | 45.0% | |
| ACAAAACACAGACACGGACA+CGG | + | chr4.3:68969778-68969797 | None:intergenic | 45.0% | |
| ACAGTACACGTGCCCAAAAA+TGG | + | chr4.3:68971974-68971993 | None:intergenic | 45.0% | |
| AGCAGCATGCATTTCACAAG+AGG | + | chr4.3:68969489-68969508 | None:intergenic | 45.0% | |
| AGTTCCGACTCTTGTTAGGT+GGG | - | chr4.3:68972529-68972548 | MS.gene88149:intron | 45.0% | |
| ATAACACCACAAGGATGGCA+TGG | + | chr4.3:68970236-68970255 | None:intergenic | 45.0% | |
| CACGGACACCAAAAACGAAA+TGG | + | chr4.3:68969760-68969779 | None:intergenic | 45.0% | |
| CGCAGCTTGCAGACTTTATT+TGG | - | chr4.3:68970297-68970316 | MS.gene88149:intron | 45.0% | |
| CGGACACCAAAAACGAAATG+GGG | + | chr4.3:68969758-68969777 | None:intergenic | 45.0% | |
| CTGAAGTTCCGACTCTTGTT+AGG | - | chr4.3:68972525-68972544 | MS.gene88149:intron | 45.0% | |
| CTGCAAGGATGGGTAGAATA+AGG | - | chr4.3:68972492-68972511 | MS.gene88149:intron | 45.0% | |
| CTTGGTAGGGGAAATTGTAC+TGG | - | chr4.3:68972126-68972145 | MS.gene88149:CDS | 45.0% | |
| GACAGATAACACCACAAGGA+TGG | + | chr4.3:68970241-68970260 | None:intergenic | 45.0% | |
| GCATATGCAGCAAACATACG+AGG | - | chr4.3:68971379-68971398 | MS.gene88149:CDS | 45.0% | |
| GCTCATGATAAGTTGTCCCT+CGG | + | chr4.3:68969845-68969864 | None:intergenic | 45.0% | |
| GGCAATGGGAAAAGTTCAAC+CGG | - | chr4.3:68969404-68969423 | MS.gene88149:CDS | 45.0% | |
| GTTTGGATTGAGGGTTTAGG+AGG | - | chr4.3:68970748-68970767 | MS.gene88149:intron | 45.0% | |
| TAGGGGAAATTGTACTGGGA+AGG | - | chr4.3:68972131-68972150 | MS.gene88149:CDS | 45.0% | |
| TCAATCCAAACACACCCTGA+AGG | + | chr4.3:68970739-68970758 | None:intergenic | 45.0% | |
| TCAGGGTGTGTTTGGATTGA+GGG | - | chr4.3:68970739-68970758 | MS.gene88149:intron | 45.0% | |
| TGGACCTATGACCCATGAAA+TGG | + | chr4.3:68971765-68971784 | None:intergenic | 45.0% | |
| TTCACAAGAGGAAGTGACAC+CGG | + | chr4.3:68969477-68969496 | None:intergenic | 45.0% | |
| TTCAGGGTGTGTTTGGATTG+AGG | - | chr4.3:68970738-68970757 | MS.gene88149:intron | 45.0% | |
| TTCATGGGTCATAGGTCCAA+TGG | - | chr4.3:68971766-68971785 | MS.gene88149:intron | 45.0% | |
| TTGGATTGAGGGTTTAGGAG+GGG | - | chr4.3:68970750-68970769 | MS.gene88149:intron | 45.0% | |
| ! | AGATCGCTTCTTTTCGTCCT+TGG | + | chr4.3:68971094-68971113 | None:intergenic | 45.0% |
| ! | GGAAGCACGTGTCTATTTAG+TGG | + | chr4.3:68971953-68971972 | None:intergenic | 45.0% |
| ! | GGGTCTTTAAGGAATGCGAA+TGG | + | chr4.3:68969871-68969890 | None:intergenic | 45.0% |
| ! | TGTCCGTGTCTGTGTTTTGT+AGG | - | chr4.3:68969778-68969797 | MS.gene88149:intron | 45.0% |
| !! | AGGACTTTTGGTAGCTTGGT+AGG | - | chr4.3:68972112-68972131 | MS.gene88149:CDS | 45.0% |
| !! | AGTCAGGACTTTTGGTAGCT+TGG | - | chr4.3:68972108-68972127 | MS.gene88149:CDS | 45.0% |
| !! | CAAGTGCATTGACTTTGCCA+AGG | - | chr4.3:68970203-68970222 | MS.gene88149:intron | 45.0% |
| !! | CTTTGGGTTGAGATGGTAAG+AGG | - | chr4.3:68972352-68972371 | MS.gene88149:intron | 45.0% |
| !! | GAAGGTGTCAACTAAAAGGC+TGG | - | chr4.3:68973004-68973023 | MS.gene88149:CDS | 45.0% |
| !! | GACTTTTGGTAGCTTGGTAG+GGG | - | chr4.3:68972114-68972133 | MS.gene88149:CDS | 45.0% |
| !! | GGACTTTTGGTAGCTTGGTA+GGG | - | chr4.3:68972113-68972132 | MS.gene88149:CDS | 45.0% |
| !! | TGAGGATTTTTGAAGGGGAG+GGG | + | chr4.3:68970953-68970972 | None:intergenic | 45.0% |
| !! | TGCATTGACTTTGCCAAGGA+TGG | - | chr4.3:68970207-68970226 | MS.gene88149:intron | 45.0% |
| !!! | ACCGGTGTCTGTGTTGTTTT+TGG | - | chr4.3:68969629-68969648 | MS.gene88149:intron | 45.0% |
| !!! | GGAAACAGGTTTTTAGGTCG+AGG | - | chr4.3:68969441-68969460 | MS.gene88149:CDS | 45.0% |
| !!! | AAATTATTAATTTTTCTTTA+AGG | + | chr4.3:68970988-68971007 | None:intergenic | 5.0% |
| !!! | AATTATTAATTTTTCTTTAA+GGG | + | chr4.3:68970987-68971006 | None:intergenic | 5.0% |
| !!! | TTTATTTTCTTAATATTTTT+TGG | - | chr4.3:68971511-68971530 | MS.gene88149:intron | 5.0% |
| !!! | TTTTAGATTTTATAAAAAAT+GGG | - | chr4.3:68972695-68972714 | MS.gene88149:intron | 5.0% |
| AACCATTACCACCTCGCTTG+CGG | + | chr4.3:68973157-68973176 | None:intergenic | 50.0% | |
| ACCTCCCACCTAACAAGAGT+CGG | + | chr4.3:68972536-68972555 | None:intergenic | 50.0% | |
| AGCTAATGAAGCTCGGACAG+TGG | - | chr4.3:68969364-68969383 | MS.gene88149:CDS | 50.0% | |
| AGTCTATCTGCTGGACCTTC+AGG | - | chr4.3:68970721-68970740 | MS.gene88149:intron | 50.0% | |
| ATTGAGGGTTTAGGAGGGGA+AGG | - | chr4.3:68970754-68970773 | MS.gene88149:intron | 50.0% | |
| GAGCAATGGAACTGCATAGC+GGG | - | chr4.3:68971297-68971316 | MS.gene88149:CDS | 50.0% | |
| GATGGCATGGATACCATCCT+TGG | + | chr4.3:68970223-68970242 | None:intergenic | 50.0% | |
| GATTGGGAGTTAGCGTCATC+CGG | - | chr4.3:68969317-68969336 | MS.gene88149:CDS | 50.0% | |
| GGAGCAATGGAACTGCATAG+CGG | - | chr4.3:68971296-68971315 | MS.gene88149:CDS | 50.0% | |
| GTCTATCTGCTGGACCTTCA+GGG | - | chr4.3:68970722-68970741 | MS.gene88149:intron | 50.0% | |
| TGAAAGGGGTCTCAAACGCA+AGG | - | chr4.3:68971898-68971917 | MS.gene88149:intron | 50.0% | |
| TGGTATCCATGCCATCCTTG+TGG | - | chr4.3:68970227-68970246 | MS.gene88149:intron | 50.0% | |
| TGTCAGATCACGGTTTAGCG+AGG | - | chr4.3:68970257-68970276 | MS.gene88149:intron | 50.0% | |
| ! | AGGATGGAGTTGGTTGAGCT+GGG | + | chr4.3:68972293-68972312 | None:intergenic | 50.0% |
| ! | CATGCTGCTGAGTTGAGTGA+TGG | - | chr4.3:68969500-68969519 | MS.gene88149:intron | 50.0% |
| ! | GTTAGCTTCAACCCAACGTG+CGG | + | chr4.3:68971853-68971872 | None:intergenic | 50.0% |
| ! | TAGGATGGAGTTGGTTGAGC+TGG | + | chr4.3:68972294-68972313 | None:intergenic | 50.0% |
| ! | TGAAGCTCGGACAGTGGTTT+TGG | - | chr4.3:68969370-68969389 | MS.gene88149:CDS | 50.0% |
| !! | GATTTTTGAAGGGGAGGGGA+GGG | + | chr4.3:68970949-68970968 | None:intergenic | 50.0% |
| !! | GGGGATGGACTAGAAGATGA+TGG | - | chr4.3:68970360-68970379 | MS.gene88149:intron | 50.0% |
| AGGGTTTAGGAGGGGAAGGA+AGG | - | chr4.3:68970758-68970777 | MS.gene88149:intron | 55.0% | |
| ATGATCGTGGTCTTCACGGG+AGG | - | chr4.3:68970339-68970358 | MS.gene88149:intron | 55.0% | |
| CATGAAGAACTCCGCAAGCG+AGG | - | chr4.3:68973143-68973162 | MS.gene88149:CDS | 55.0% | |
| CTGGACCTTCAGGGTGTGTT+TGG | - | chr4.3:68970731-68970750 | MS.gene88149:intron | 55.0% | |
| GGGTTTAGGAGGGGAAGGAA+GGG | - | chr4.3:68970759-68970778 | MS.gene88149:intron | 55.0% | |
| GGTTTAGGAGGGGAAGGAAG+GGG | - | chr4.3:68970760-68970779 | MS.gene88149:intron | 55.0% | |
| TCCGACTCTTGTTAGGTGGG+AGG | - | chr4.3:68972532-68972551 | MS.gene88149:intron | 55.0% | |
| TGATCGTGGTCTTCACGGGA+GGG | - | chr4.3:68970340-68970359 | MS.gene88149:intron | 55.0% | |
| TTGTGGTGTGACCGCACGTT+GGG | - | chr4.3:68971839-68971858 | MS.gene88149:intron | 55.0% | |
| ! | TGGTTGGCCGTACAGGCAAT+GGG | - | chr4.3:68969390-68969409 | MS.gene88149:CDS | 55.0% |
| ! | TTGGTTGGCCGTACAGGCAA+TGG | - | chr4.3:68969389-68969408 | MS.gene88149:CDS | 55.0% |
| !! | GGATTTTTGAAGGGGAGGGG+AGG | + | chr4.3:68970950-68970969 | None:intergenic | 55.0% |
| !!! | GCTCGGACAGTGGTTTTGGT+TGG | - | chr4.3:68969374-68969393 | MS.gene88149:CDS | 55.0% |
| !!! | GTGGTTTTGGTTGGCCGTAC+AGG | - | chr4.3:68969383-68969402 | MS.gene88149:CDS | 55.0% |
| CTCCGCAAGCGAGGTGGTAA+TGG | - | chr4.3:68973152-68973171 | MS.gene88149:CDS | 60.0% | |
| GAAGAACTCCGCAAGCGAGG+TGG | - | chr4.3:68973146-68973165 | MS.gene88149:CDS | 60.0% | |
| GATCGTGGTCTTCACGGGAG+GGG | - | chr4.3:68970341-68970360 | MS.gene88149:intron | 60.0% | |
| GTTGTGGTGTGACCGCACGT+TGG | - | chr4.3:68971838-68971857 | MS.gene88149:intron | 60.0% | |
| TAGGAGGGGAAGGAAGGGGA+GGG | - | chr4.3:68970764-68970783 | MS.gene88149:intron | 60.0% | |
| TTAGGAGGGGAAGGAAGGGG+AGG | - | chr4.3:68970763-68970782 | MS.gene88149:intron | 60.0% | |
| GTGGTCTTCACGGGAGGGGA+TGG | - | chr4.3:68970345-68970364 | MS.gene88149:intron | 65.0% | |
| !! | AGGTCGAGGGCTAGCTCGTC+CGG | - | chr4.3:68969455-68969474 | MS.gene88149:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 68969290 | 68973190 | 68969290 | ID=MS.gene88149 |
| chr4.3 | mRNA | 68969290 | 68973190 | 68969290 | ID=MS.gene88149.t1;Parent=MS.gene88149 |
| chr4.3 | exon | 68972929 | 68973190 | 68972929 | ID=MS.gene88149.t1.exon1;Parent=MS.gene88149.t1 |
| chr4.3 | CDS | 68972929 | 68973190 | 68972929 | ID=cds.MS.gene88149.t1;Parent=MS.gene88149.t1 |
| chr4.3 | exon | 68972049 | 68972326 | 68972049 | ID=MS.gene88149.t1.exon2;Parent=MS.gene88149.t1 |
| chr4.3 | CDS | 68972049 | 68972326 | 68972049 | ID=cds.MS.gene88149.t1;Parent=MS.gene88149.t1 |
| chr4.3 | exon | 68971274 | 68971438 | 68971274 | ID=MS.gene88149.t1.exon3;Parent=MS.gene88149.t1 |
| chr4.3 | CDS | 68971274 | 68971438 | 68971274 | ID=cds.MS.gene88149.t1;Parent=MS.gene88149.t1 |
| chr4.3 | exon | 68971053 | 68971187 | 68971053 | ID=MS.gene88149.t1.exon4;Parent=MS.gene88149.t1 |
| chr4.3 | CDS | 68971053 | 68971187 | 68971053 | ID=cds.MS.gene88149.t1;Parent=MS.gene88149.t1 |
| chr4.3 | exon | 68969290 | 68969490 | 68969290 | ID=MS.gene88149.t1.exon5;Parent=MS.gene88149.t1 |
| chr4.3 | CDS | 68969290 | 68969490 | 68969290 | ID=cds.MS.gene88149.t1;Parent=MS.gene88149.t1 |
| Gene Sequence |
| Protein sequence |
