AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene88253


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene88253.t1 MTR_3g012030 98.188 276 5 0 1 276 1 276 0.0 521
MS.gene88253.t1 MTR_3g012030 98.069 259 5 0 18 276 1 259 6.17e-174 486
MS.gene88253.t1 MTR_3g012030 97.674 215 5 0 62 276 1 215 2.96e-139 397
MS.gene88253.t1 MTR_8g041420 69.204 289 72 6 1 273 1 288 2.80e-120 351
MS.gene88253.t1 MTR_5g088760 52.560 293 111 10 1 273 1 285 6.71e-64 207
MS.gene88253.t1 MTR_5g088760 51.064 282 110 10 12 273 3 276 1.02e-55 185
MS.gene88253.t1 MTR_5g047890 83.333 102 17 0 299 400 241 342 7.70e-55 184
MS.gene88253.t1 MTR_3g012020 85.437 103 14 1 299 400 291 393 2.87e-54 184
MS.gene88253.t1 MTR_5g088760 50.000 276 110 10 18 273 1 268 1.42e-51 174
MS.gene88253.t1 MTR_1g055415 77.451 102 23 0 299 400 242 343 9.25e-51 174
MS.gene88253.t1 MTR_5g047770 84.270 89 14 0 171 259 54 142 3.68e-46 155
MS.gene88253.t1 MTR_2g097240 75.258 97 24 0 303 399 244 340 1.26e-41 150
MS.gene88253.t1 MTR_6g042490 70.588 102 30 0 299 400 154 255 2.84e-40 144
MS.gene88253.t1 MTR_4g046780 68.041 97 31 0 304 400 156 252 3.26e-37 135
MS.gene88253.t1 MTR_4g088740 60.748 107 40 1 292 398 296 400 1.27e-35 135
MS.gene88253.t1 MTR_4g088735 58.407 113 44 2 287 398 164 274 1.39e-34 129
MS.gene88253.t1 MTR_4g046767 62.105 95 36 0 304 398 181 275 8.81e-32 122
MS.gene88253.t1 MTR_8g092230 51.961 102 46 1 299 400 198 296 3.87e-25 104
MS.gene88253.t1 MTR_4g066680 53.125 96 42 1 303 398 244 336 2.44e-24 102
MS.gene88253.t1 MTR_4g017240 50.000 100 47 1 299 398 249 345 1.70e-22 97.8
MS.gene88253.t1 MTR_2g023340 40.449 89 50 1 1 86 75 163 7.01e-12 65.5
MS.gene88253.t1 MTR_1g082660 39.744 78 47 0 9 86 102 179 9.08e-12 65.5
MS.gene88253.t1 MTR_3g099180 40.506 79 47 0 8 86 55 133 1.01e-11 64.7
MS.gene88253.t1 MTR_3g099180 40.506 79 47 0 8 86 55 133 1.08e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene88253.t1 AT3G12480 52.249 289 111 9 1 274 1 277 1.94e-75 236
MS.gene88253.t1 AT5G19490 63.504 137 42 4 1 136 1 130 1.28e-49 169
MS.gene88253.t1 AT2G34700 39.604 101 55 2 304 398 73 173 2.53e-14 71.2
MS.gene88253.t1 AT1G54830 41.026 78 46 0 9 86 71 148 4.00e-12 65.9
MS.gene88253.t1 AT1G54830 41.026 78 46 0 9 86 71 148 4.00e-12 65.9
MS.gene88253.t1 AT1G54830 41.026 78 46 0 9 86 71 148 4.00e-12 65.9
MS.gene88253.t1 AT1G08970 41.026 78 46 0 9 86 81 158 7.96e-12 65.1
MS.gene88253.t1 AT1G08970 41.026 78 46 0 9 86 81 158 7.96e-12 65.1
MS.gene88253.t1 AT1G08970 41.026 78 46 0 9 86 81 158 7.96e-12 65.1
MS.gene88253.t1 AT1G08970 41.026 78 46 0 9 86 81 158 7.96e-12 65.1
MS.gene88253.t1 AT2G33790 39.604 101 53 3 305 398 138 237 8.79e-12 65.1
MS.gene88253.t1 AT5G63470 40.506 79 47 0 8 86 78 156 1.01e-11 65.1
MS.gene88253.t1 AT5G63470 40.506 79 47 0 8 86 78 156 1.01e-11 65.1
MS.gene88253.t1 AT3G48590 40.506 79 47 0 8 86 65 143 1.12e-11 64.7
MS.gene88253.t1 AT1G56170 41.026 78 46 0 9 86 77 154 1.92e-11 63.5
MS.gene88253.t1 AT1G56170 41.026 78 46 0 9 86 77 154 1.92e-11 63.5

Find 110 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTATCAGTCTTGGCTTTA+AGG 0.071230 3.3:+7831663 None:intergenic
AATCTTCATGGTGGTCTTAC+TGG 0.189591 3.3:-7831539 MS.gene88253:CDS
GAACCCAAATGTCATCATTA+AGG 0.251243 3.3:-7831437 None:intergenic
CCATTATCTATTGCCATACT+TGG 0.281670 3.3:+7835111 None:intergenic
AAGAATGGTTACTTCTATAT+TGG 0.286061 3.3:-7831644 MS.gene88253:CDS
ATGGCATCAATTTCTTAGTA+TGG 0.291041 3.3:-7832970 MS.gene88253:CDS
TTGCAGCAGGTTCAGGCAAT+GGG 0.296714 3.3:+7834947 None:intergenic
TTTCATGTAAGTTGGCATTC+AGG 0.299510 3.3:+7835013 None:intergenic
AGGGGAAGAGGAAGGGGTAG+AGG 0.303468 3.3:-7835243 MS.gene88253:CDS
CTTAGTATGGAGGAGATTCT+TGG 0.315865 3.3:-7832957 MS.gene88253:CDS
AGTGAAACGATCGGTGTCTA+AGG 0.328608 3.3:-7831501 MS.gene88253:CDS
TTACAAATGCAATGCATTCA+TGG 0.332233 3.3:+7836269 None:intergenic
GGTATCAAGCTTCTTCTTCA+TGG 0.333154 3.3:+7839000 None:intergenic
TTTCCTTAATGATGACATTT+GGG 0.349096 3.3:+7831434 None:intergenic
GGACATGGCCATTCTGAGGC+TGG 0.349144 3.3:-7835672 MS.gene88253:CDS
TGGACTTCGAACCTTCTCTT+TGG 0.350657 3.3:+7835630 None:intergenic
ATCTATTGCCATACTTGGAT+TGG 0.365176 3.3:+7835116 None:intergenic
TCTATTGCCATACTTGGATT+GGG 0.367608 3.3:+7835117 None:intergenic
AGAGGCTAAGCGGAGTAAAA+TGG 0.373594 3.3:-7835492 MS.gene88253:intron
TGACAACGCCAAACACAAAT+TGG 0.375258 3.3:-7831687 MS.gene88253:CDS
ATGCCATTTCCTGTCCAATC+TGG 0.375578 3.3:+7832986 None:intergenic
TAGCCAGATTGGACAGGAAA+TGG 0.377452 3.3:-7832989 MS.gene88253:CDS
TTTAAGGACCAATTTGTGTT+TGG 0.378265 3.3:+7831679 None:intergenic
TGGCATTCAGGTCAATGTTT+CGG 0.380240 3.3:+7835025 None:intergenic
ATCTTCATGGTGGTCTTACT+GGG 0.380597 3.3:-7831538 MS.gene88253:CDS
CCAAGTATGGCAATAGATAA+TGG 0.389197 3.3:-7835111 MS.gene88253:CDS
TCTGTTGTTGCAGCAGGTTC+AGG 0.395311 3.3:+7834940 None:intergenic
GACATGGCCATTCTGAGGCT+GGG 0.396129 3.3:-7835671 MS.gene88253:CDS
CTAAAACCCTCAAATCTTCA+TGG 0.408123 3.3:-7831551 MS.gene88253:CDS
TCTTTAAAACTCTACACTGT+TGG 0.411362 3.3:-7831473 MS.gene88253:CDS
GTAGAGTTATTTCATAAGTT+CGG 0.415756 3.3:+7836307 None:intergenic
GTAACCATTCTTATCAGTCT+TGG 0.417841 3.3:+7831655 None:intergenic
AGACGTCCCCAATCCAAGTA+TGG 0.420572 3.3:-7835124 MS.gene88253:CDS
AGCAACTCACAAACTAAAAC+AGG 0.421254 3.3:+7836450 None:intergenic
GGAGGCTCAAAGAACATTGT+AGG 0.422367 3.3:-7831623 MS.gene88253:CDS
AGAGGAAGAGGCCGCGGTCG+AGG 0.425950 3.3:-7835225 MS.gene88253:CDS
AGATTCAACCTGCTGATGTA+AGG 0.427032 3.3:+7835179 None:intergenic
AGAGGAAGGGGTAGAGGAAG+AGG 0.428938 3.3:-7835237 MS.gene88253:CDS
GTTTGATTACAGCTTGAGTT+GGG 0.437970 3.3:-7835285 MS.gene88253:intron
CCACACTGGCGGTACTGGTA+GGG 0.444180 3.3:-7835262 MS.gene88253:CDS
GTTGCAGCAGGTTCAGGCAA+TGG 0.446498 3.3:+7834946 None:intergenic
TTGGGCCACACTGGCGGTAC+TGG 0.449291 3.3:-7835267 MS.gene88253:CDS
GGCGGTACTGGTAGGGGAAG+AGG 0.449384 3.3:-7835255 MS.gene88253:CDS
AAAACTTACAGCAGGGAAAC+GGG 0.451379 3.3:+7838979 None:intergenic
GGAGGAGATTCTTGGGCAGT+TGG 0.451897 3.3:-7832949 MS.gene88253:CDS
TGCATATCTGTTGTTGCAGC+AGG 0.454294 3.3:+7834934 None:intergenic
ATGCAACATGAAGAAATTCC+AGG 0.456390 3.3:-7834916 MS.gene88253:CDS
TGTTTGATTACAGCTTGAGT+TGG 0.458715 3.3:-7835286 MS.gene88253:intron
ACTGGTAGGGGAAGAGGAAG+GGG 0.463619 3.3:-7835249 MS.gene88253:CDS
TTAGTATGGAGGAGATTCTT+GGG 0.474810 3.3:-7832956 MS.gene88253:CDS
CAGTTGGCTGTCTTGTGCAT+TGG 0.475795 3.3:-7832933 MS.gene88253:intron
ACATGGCCATTCTGAGGCTG+GGG 0.478857 3.3:-7835670 MS.gene88253:CDS
AATGGTTACTTCTATATTGG+AGG 0.479179 3.3:-7831641 MS.gene88253:CDS
AGGGGTAGAGGAAGAGGCCG+CGG 0.479703 3.3:-7835231 MS.gene88253:CDS
AGACCACCATGAAGATTTGA+GGG 0.495316 3.3:+7831545 None:intergenic
AAGAGAAACCTTACATCAGC+AGG 0.497349 3.3:-7835187 MS.gene88253:CDS
GCCACACTGGCGGTACTGGT+AGG 0.501008 3.3:-7835263 MS.gene88253:CDS
CACACTGGCGGTACTGGTAG+GGG 0.503334 3.3:-7835261 MS.gene88253:CDS
AAGACCACCATGAAGATTTG+AGG 0.505523 3.3:+7831544 None:intergenic
GAGGAAGAGGCCGCGGTCGA+GGG 0.509630 3.3:-7835224 MS.gene88253:CDS
CCATGTCCATGGCTATAGTC+AGG 0.515058 3.3:+7835687 None:intergenic
CTGCAGCTTGCAGCAAACCT+TGG 0.517052 3.3:-7834853 MS.gene88253:intron
ATGCAAGCAGATGAGGATGT+TGG 0.535775 3.3:-7836492 MS.gene88253:CDS
CCATCTTGTCGACATCAGAA+AGG 0.538115 3.3:+7834887 None:intergenic
GTGAAACGATCGGTGTCTAA+GGG 0.548675 3.3:-7831500 MS.gene88253:CDS
CATCAGCCCCAGCCTCAGAA+TGG 0.550548 3.3:+7835664 None:intergenic
TACTGGTAGGGGAAGAGGAA+GGG 0.550796 3.3:-7835250 MS.gene88253:CDS
CCTTTCTGATGTCGACAAGA+TGG 0.553095 3.3:-7834887 MS.gene88253:CDS
CATTTGGGTTCAAATGCAAA+CGG 0.556290 3.3:+7831449 None:intergenic
CTATTGCCATACTTGGATTG+GGG 0.558026 3.3:+7835118 None:intergenic
TCAGGCAATGGGGCCTGAGT+AGG 0.561825 3.3:+7834958 None:intergenic
CAGCTTGAGTTGGGCCACAC+TGG 0.562286 3.3:-7835276 MS.gene88253:CDS
CATCTTGTCGACATCAGAAA+GGG 0.564046 3.3:+7834888 None:intergenic
AAAGCCAAGACTGATAAGAA+TGG 0.565446 3.3:-7831659 MS.gene88253:CDS
GAAGATAATGCAAGCAGATG+AGG 0.565858 3.3:-7836499 MS.gene88253:CDS
AGGAAGAGGCCGCGGTCGAG+GGG 0.567783 3.3:-7835223 MS.gene88253:CDS
TGAAACGATCGGTGTCTAAG+GGG 0.571261 3.3:-7831499 MS.gene88253:CDS
CCTCAGAATGGCCATGTCCA+TGG 0.574358 3.3:+7835676 None:intergenic
ATGTTTACCAGGAAAGCTGC+TGG 0.583874 3.3:-7835539 MS.gene88253:intron
TTGTAATGACAGCGATGAAG+AGG 0.584902 3.3:-7835510 MS.gene88253:CDS
TTTGAGAGACATTGTCAGCA+GGG 0.585914 3.3:-7835712 MS.gene88253:CDS
AGATAATGGTTCAGAACCAA+GGG 0.587090 3.3:-7835097 MS.gene88253:CDS
TAGATAATGGTTCAGAACCA+AGG 0.587959 3.3:-7835098 MS.gene88253:CDS
TGTGTTTGGCGTTGTCACAT+TGG 0.589091 3.3:+7831693 None:intergenic
TTCGAACCTTCTCTTTGGAA+CGG 0.592528 3.3:+7835635 None:intergenic
AGAACCAAGGGAGTTATCAA+AGG 0.594821 3.3:-7835085 MS.gene88253:CDS
ACATCAGAAAGGGACCAACC+TGG 0.595072 3.3:+7834898 None:intergenic
ATCGCGCCGTTCCAAAGAGA+AGG 0.600860 3.3:-7835641 MS.gene88253:intron
GTACTGGTAGGGGAAGAGGA+AGG 0.602926 3.3:-7835251 MS.gene88253:CDS
TGCAGCAGGTTCAGGCAATG+GGG 0.603402 3.3:+7834948 None:intergenic
GCATCAATTTCTTAGTATGG+AGG 0.612982 3.3:-7832967 MS.gene88253:CDS
CCTGACTATAGCCATGGACA+TGG 0.613541 3.3:-7835687 MS.gene88253:CDS
CCATGGACATGGCCATTCTG+AGG 0.616486 3.3:-7835676 MS.gene88253:CDS
CTTGAGTTGGGCCACACTGG+CGG 0.626402 3.3:-7835273 MS.gene88253:CDS
GTTTGCTGAATAGAAGTGCA+AGG 0.627861 3.3:+7835153 None:intergenic
GAAAATATTGCAGCTCACGA+AGG 0.630972 3.3:-7835063 MS.gene88253:CDS
AGGGTTCCTGACTATAGCCA+TGG 0.631288 3.3:-7835693 MS.gene88253:CDS
TCTTAAGCAAGTGAAACGAT+CGG 0.632311 3.3:-7831510 MS.gene88253:CDS
AAGCACGGATATACCTACTC+AGG 0.637338 3.3:-7834971 MS.gene88253:CDS
GGATGTTGGAAAGATAGCAC+TGG 0.638767 3.3:-7836478 MS.gene88253:CDS
TCTTCATGGTGGTCTTACTG+GGG 0.642122 3.3:-7831537 MS.gene88253:CDS
AACATGAAGAAATTCCAGGT+TGG 0.648140 3.3:-7834912 MS.gene88253:CDS
CAGTTCGAGCCCCTCGACCG+CGG 0.651823 3.3:+7835214 None:intergenic
CCCTACCAGTACCGCCAGTG+TGG 0.652289 3.3:+7835262 None:intergenic
GAAACGATCGGTGTCTAAGG+GGG 0.667584 3.3:-7831498 MS.gene88253:CDS
GTCACATTGGAGCTTCACAA+CGG 0.672464 3.3:+7831706 None:intergenic
ACAGCGATGAAGAGGCTAAG+CGG 0.705575 3.3:-7835502 MS.gene88253:CDS
AAACCCTCAAATCTTCATGG+TGG 0.711349 3.3:-7831548 MS.gene88253:CDS
TATGAAATAACTCTACAGAG+AGG 0.722734 3.3:-7836300 MS.gene88253:CDS
TCTAAAACAACGCTGCAACG+AGG 0.740885 3.3:+7831590 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr3.3 gene 7831439 7839020 7831439 ID=MS.gene88253
chr3.3 mRNA 7831439 7839020 7831439 ID=MS.gene88253.t1;Parent=MS.gene88253
chr3.3 exon 7838988 7839020 7838988 ID=MS.gene88253.t1.exon1;Parent=MS.gene88253.t1
chr3.3 CDS 7838988 7839020 7838988 ID=cds.MS.gene88253.t1;Parent=MS.gene88253.t1
chr3.3 exon 7836460 7836532 7836460 ID=MS.gene88253.t1.exon2;Parent=MS.gene88253.t1
chr3.3 CDS 7836460 7836532 7836460 ID=cds.MS.gene88253.t1;Parent=MS.gene88253.t1
chr3.3 exon 7836273 7836366 7836273 ID=MS.gene88253.t1.exon3;Parent=MS.gene88253.t1
chr3.3 CDS 7836273 7836366 7836273 ID=cds.MS.gene88253.t1;Parent=MS.gene88253.t1
chr3.3 exon 7835642 7835770 7835642 ID=MS.gene88253.t1.exon4;Parent=MS.gene88253.t1
chr3.3 CDS 7835642 7835770 7835642 ID=cds.MS.gene88253.t1;Parent=MS.gene88253.t1
chr3.3 exon 7835493 7835550 7835493 ID=MS.gene88253.t1.exon5;Parent=MS.gene88253.t1
chr3.3 CDS 7835493 7835550 7835493 ID=cds.MS.gene88253.t1;Parent=MS.gene88253.t1
chr3.3 exon 7834854 7835295 7834854 ID=MS.gene88253.t1.exon6;Parent=MS.gene88253.t1
chr3.3 CDS 7834854 7835295 7834854 ID=cds.MS.gene88253.t1;Parent=MS.gene88253.t1
chr3.3 exon 7832934 7833014 7832934 ID=MS.gene88253.t1.exon7;Parent=MS.gene88253.t1
chr3.3 CDS 7832934 7833014 7832934 ID=cds.MS.gene88253.t1;Parent=MS.gene88253.t1
chr3.3 exon 7831439 7831731 7831439 ID=MS.gene88253.t1.exon8;Parent=MS.gene88253.t1
chr3.3 CDS 7831439 7831731 7831439 ID=cds.MS.gene88253.t1;Parent=MS.gene88253.t1
Gene Sequence

>MS.gene88253

ATGAAGAAGAAGCTTGATACCCGTTTCCCTGCTGTAAGTTTTTTCTGCTTTTTAGCTTTAAAGTTTGTATTTTTTCATAGTGCCGTTGTGTTTTTGCATCTGGGTATTTTTTTTTTGTTTTTATTGATTTTTATATAATTGAGCTTTTTTTAATTTTGGTTTGATGATAAATTGATAATTTAGGGTTTCTGGGTTGCGGGGGTGTGAATTGGGTGGAATGGTATGATGGGTGTGACTGGAATTTTAGTATGATTCATAAGATTTATTTGTATGCTAATAGCTCACGTAGACACCGACTCCGGTCACGACAGTGACACATCGACACCGATAATAATTTGCGTAGATACATAATTAAATGCAATTACATGTGTCAGTGTCGTGTTGGATATTGGCATGTGTCAATTGAACTTTGTTTATTTATTTGGGTTTGATGATAATAGGGTTTCTAGGTTGTGGGGGTGTGAATTGGGTAGAGTGGCATGATGGGCATGACTGGAATTTTTGTATGATTCATAGGATTTTGATGTCTGCTAATAGCTCACATAGACACCGACACCGGTCACGACACTAATACATCGACACTCATGATAATTTGAGAAAATATAATGACATGTGTCAATGTGGTGTTGGTGTGGAAAACTGACATGTGCCAATTGAGCTTTGGTTACTTAGGTTTGATGATAATTGAGGGTTACTAGTTGTGGGGTGGTGTGATTGGAATTTAGTATGATTCATAGGACTTATTTGCCTGCTAAAAACTCAGAGACCAATACCGGTCACAACTGTCACATTGACACCGATAATAATTTGAGAAGATACATAATTGAATGTAATTGCATGTGTCAATGTCGTGTCGGATACCCGCACATGTCAATTGAGCTTTGCTTATTTGGGTTTGATGATAATTGAGGGTTTCTGGGTTATCGGGGTGTGAATTGGGTAGAGTGGTATGTTGGGTTTGACTGGAATTTAGTAAAGTTCATAGGATTTATATGCTCGTGTTTGATTATAATTTGAAATATATAGGTTAATAGTTATGTCTCATGCGAGTTTTAGCCAGTGCTATCAATAACCCATTATTTCGCTACATCTGCTAGCAAAACTGGAATAGAGGCAGCTATTGTCCTATTAGAAAAATTAGGACAGAGTCACGGTAGCGTTATAGTGCCTCTATCGCCGCTATTTGACAATACTTGTTTAAGCCTTCTTGGTGCTTGGTTGGTTTGGGTGGGGTCTATAATTGCTGTTAGTATCAAAATAAGTGAGGAATGTATTCATTGGGGCTGTTGTTGAGCTTTACGATGGGTATGTTTTATTGGGTTAACATACCTCTTTGGCCTTCCATTTGAATTATCCTAATGCTCTGGAAATTTGAAGTGCACAAATTTTCCGTTTGTGAATTCGATGATCCTTTTGTGATGGTTACGGTTAGAGATATAGGCTTATGTTTGCATTACCCCTTTAGTTTTGTGAAATCTAAATGCAAAAGATAAAATTTGTCTTTTGTGTTTTTTGCCTCAAATTCTGATGCAAACTGCAGTGCAAAAATGCAGATAATTGTTCATTTGTCGCTTTTGCTGCAAAGAAGATGCTTAATCATACAAAGTATGCTTGTACAGATGTGCCAGAACATTATTTTTTATCACAAGGTTATAGGTAATAAATGATAGTCCTTGCCCGTTTTCCATATTATCCCAATTACTTGAAGTGAAGCTTGCAACACATATGCACATTGTGCAAACTGTGATGTTAAATAATGTAATCAGAGAGATGGATTGGTTAAACCGAATGAAGATGGTTATAGAAGAATGTCATTGTCAAGACTGAAGTCTTTTATAAGTGTAGGTTATGTCAACTTTTTTCCAGCTGCTGCTGTCATATATATAGATAAATTGCTCATTCTCTAGCATCGTATGTGTAACTTATACAATTGTATAGATCTCCTCCTACAGTTATCCATATATGAAAAGATTGCATTGACCAAACCTATTGGATACATTTATGATTACACCTGGAGTTCGGGTTTTGGTTAACACTGCAACTGATTGTGTCCTTCATTCTTTCCTCTTTGTTAAAGTGTTCTATGCTTAGATTTAATTCTGTAGCAAAATGGCTGACCATGTTTTGTGGAATAGTTTTTGTATCTTGCTCCTTTTGATATATTGAGTAGCTTAACCTTGTTGAATCACACTGTTCTGCTTAGCCAATAGGAGTGGAAGTGTTGTCAAACAGTGGCTATAACAGCTCTATAGCACTATAGTGTAGCGGAATTGGAACAAATCACAATCGTTCCGATCTAGTACAAAGTATTGTCAAACAGCAGCTTTAGCATAACAGAATTTAAACATTCCGTTATTTCCTACAATCCGCGATTGACAACACTCAGTGGGGAATTTGAGAATATAATTTAGAACCTTTACAAATAATCTATTTAAGCAAAGCAATCTATTAAGAGAATGCTTTATCTCATGAAAACATTAATTTGCAGGCTCGGATAAAGAAGATAATGCAAGCAGATGAGGATGTTGGAAAGATAGCACTGGCAGTTCCTGTTTTAGTTTGTGAGTTGCTTTTAGTTATTTCTTAGTTAAATTTTGGGCATTTGATGCGTCTTTTCTCTCATGTTGTTGACCTCGGTCTTGATTTTCTTACAGCAAAAGCTCTGGAATTATTTTTGCAAGATCTTTGTGACCGAACTTATGAAATAACTCTACAGAGAGGAGCAAAGACCATGAATGCATTGCATTTGTAAGTTGTGGAACACTTTATTTTCTATATTTTTCTTGAGGAAACCTTCAGCTGTGAATTGTTTCTGTCCATGCATAGACCGATTTTACTTGTGCTGGTGTTTGATTTAATGATTAAGAATTGAGGTTACTAAAATTTCCGATTCTCATCTCTCGGTCAAAGACGGTCAGATCCATGCTAAGTATGAACTGATCACCCTAAATGTAAAGCATTTGGGTTTTAGTTTTATATCTCCGAATAGAGTTTTCGGAAAATTTACTGTCGGGCCTGTTTGTTACGAATTATAAAATAAGTGATTTTGGCATTCAATGATTTAGAGAAGCTATTTTGTGTTTGTTTATGTAATAAGAATCACTTTTAAAAAAAAAAATCATCGATACAAAATAATGTTTATGAGAAGCTGCTCAAAACAGCTCTCCATTCGAAGCAGATTTTAGATATATATCTTTAATGTATTATGTATTGTGAGCCTAGTCTAACCAGTGGTGAACACAAATTTCAGGAAACATTGTGTACAAAGCTACAACGTCTTTGACTTTTTGAGAGACATTGTCAGCAGGGTTCCTGACTATAGCCATGGACATGGCCATTCTGAGGCTGGGGCTGATGATCGCGCCGTTCCAAAGAGAAGGTTCGAAGTCCAGTAGCTTTTATCTTTTTATTTATCTTGTCTAATTTATCGATGCATATAAGCAATTAAAACCGTTAAGAATGTTTACCAGGAAAGCTGCTGGTGATGATTGTAATGACAGCGATGAAGAGGCTAAGCGGAGTAAAATGGTAATTTCCCTTTTAATGATAAGTTCAAATAAGTCACTTCATAGAGCCTCTTTATTCATAAGCATCTATAACCTTATAATTGGGAATCAAATGTTTATCTCAGTTAAAAAGTTCTAAGAAAGTAGAAGGTAATCTAAACTGAGACCTGCTGCAGTTTTTAGTCATGATCGATGCTGGTTAATTTTGTTTGATTACAGCTTGAGTTGGGCCACACTGGCGGTACTGGTAGGGGAAGAGGAAGGGGTAGAGGAAGAGGCCGCGGTCGAGGGGCTCGAACTGCAGAAAGAGAAACCTTACATCAGCAGGTTGAATCTGAACCTTGCACTTCTATTCAGCAAACTAGCAAAGACGTCCCCAATCCAAGTATGGCAATAGATAATGGTTCAGAACCAAGGGAGTTATCAAAGGAAAATATTGCAGCTCACGAAGGAAGTACTCAATCTCTCCGAAACATTGACCTGAATGCCAACTTACATGAAAACGAGAACAAAAACAATACAAGCACGGATATACCTACTCAGGCCCCATTGCCTGAACCTGCTGCAACAACAGATATGCAACATGAAGAAATTCCAGGTTGGTCCCTTTCTGATGTCGACAAGATGGCGATTGACACGCTGCAGCTTGCAGCAAACCTTGGTAATAGGCTAGATGAGGATGAGGAAGATTATGATGAGGAGGAAGAGTAGCTAACACCTTAAGGTGGAAATCATGACTCTGATGCTAAATGAATGATCCCTTTTTTTCTTTGCCTGGTATACCAATGACCTTGTGTAGATACTAGCAAATGTAGTTTCTTCTTATTTAGTTTCACCACTTTTTAGGGTTTAAATGGATATTGTTGTTGTAGGTTACATCAACTTTGCTAGTACATGATTTACTTCTTGGTAAAGTTGGGTTACCAGTTGGTTTCATTGTTGTTTTATTTAAGATACTGTCTGTCAATGGTTTTCTACTTCTGAGTTGTACCTCAATCAGAAAGCATAAGTATCCTTCTTAACAATAAATAAGGTAAAAGAAAAAAAAAAGAAAAATAATATCTAGGTGATGGAAGAAGTAAGATTAAATTGAAATAGATTATAAACATATTGTTTTATTAATTAACATTTTTTAATTCTTTTAAAATGTTTATATTTTTAAATAAATATTTACAAACACCACCAGGTTCGTTTCATGTATTTTATGAAATATAATATTTTACTTTTTCAAATAATAAGCAAAGAAATTGCATCTATTGAAAAAGTCTTGATTACAAGGATGTTATTGTAGAAAAGCACAACAACCAATAGTAAACAACACCACAAATGTCAGATAAAAAATAATAATTTAAAGACAACAGTTAGTTGATAGAGTACACATTTATTTCCCCTGTGGAAGAGTACATTGGTCATTATGCTAGGATACTTGATGTTGATTTCTCTGAAAAAATTTACAAGGATATTCTGGTAGAACGTGATGGTTATCTTTGTAAATTGGACACACAATAATGGTAAGTAAATTGGACACACAATTCATCTTTGTAAGAAGATGCGAAAGCATGATAGATCAAAAAGAAAGATGCAAGCACTTTCAATCCACCAATGCTGATAAGGTTATGCCTGTTTTTGGCAATCAAGTGGGTAAAAAAGGTTAGCGTATGAGACTTAGCAGGAAATGGGCAACAAGAGTATAATCATGGTCATGCTAAGAATTCTATGACTGCTAAGAGAATTAGCATACCAGTTCCTGTAGCAGTGAATCAGGTTATTTATATTTCTGTGAATCAGGAACTGATTATCAGAATCAGAAACTGATTAGCAGTGAATCAGCCCTGTTGTCTTTGAAGACAGTGCTGTCATGTTGGAGAAAAGTAATGGACCTGCAGTTGAAAAATGTCATCCTAAGGATATAGATCAAGCAAAAAATAATGAAAAATCTCCCTGGAGATAACATCGTTTATTACGGCAGGGACTGAACCGGTGCATTATTTAGCAGGAAAGTCAGCTGATGAAGTGGCTAAGGTTGTTTCAAGTGATATTAATACCAACCATTTTGCAGCTTCTCTAGCTTTTGATGACAGAATCATAACCTATGAAGTACAGACACGGACACTGGACACAACACTGACGCGTCCACAGTGATAAAATTTTGTGAAAATGACATAGGTTATGATCCTGAGACTCGCCTTCGATCACAAGTATCGGTGCAACATAGATCATAACAAATTATGCTCACAATTAGAGTTAAACATACCTCTGAGGAGACCTATCCTCTGAGGAGCAAGATATGGCAGATGAATGAAATAACTATCAAGTGAGTGATAGAGAAGCTGATAGGGATTTCACCTTTTATGTCTCCAATAGGCAAAAAAAGGTGAAATTGAATCACAAGCATAATAGATTGCAGTAATCCAGTGGACATATAGTGATTATATACAAACTCATTCCAAAAAGGGTGTTAATAAAGAGAATGCCATATGAGTTTTGTTCCTGTTCTCAGTTTTAGCCAGATTGGACAGGAAATGGCATCAATTTCTTAGTATGGAGGAGATTCTTGGGCAGTTGGCTGTCTTGTGCATTGGTTTGTGATTTCATTGGTTGCTTTCTTTAGCTTAGTGTTCCTTGAAGGCTTGCTGGTAGCTTTGGTTTCCATAACTAGTTTAGGTTGTAACTTAGTGTTGATCCTTGAAACTTTTATGGTTGTTTGTTTGTTTCATTGGGTTTTAGCTTAGTCCCCCAATTTCTTCCTTTTTTTTTTTTTTTTTACTTTGGCTTAAATGCCTTTTTGGTAAACATTTTTTCATTTTTCTAAAGTTTTAGTACCTCTATTTTAAAATTCAGCTTTTGCTCCTCCTATTTCAAATTTTTATAACTTTTGATCCCCATAATATTTTAAGGTCAACGTTGATGATGTGTACAAGTCATTAATGACATGACAAAACACATATGAAGAAGTCACTAAATTTGATATGTCCACACGTGCCTTGTCATGTCATAAGTGACTTAGACTCATCGTCAAAGTTGATCTTAAAATGGGATGAGAGATCAAAAGTTAGAAAAAATTGAGATAAAAGGACCAAAAAGCTGAATTCTAAAATAGGAGTACCAAATCTTTAGAAAAGTGAATGGTTAAATAAGTTTTTGGTCTCTATAAATATATTCAATTTCGTTTTTAGTCCTCATAAAAAAAGTGACATGTTTTAATCCCTATAAAAATTTTCACCAAGTAGTTTTGAATTTTTTTAACATACTTGTTTAAAACACTCCGGTTCATACTCCTTTATTTTATTTGTCTTTTTAATTTACAAAGTATTTTTTTTATTTTTTTTCCTACTATCTTTTGTCACACCAAGCATTGCCTACAATCTTGCATGAAGAATCAAAATATATTATGTCAAATTGAGTGTATTTTTTTCACACCTTTTAGCCTAATATTTTATCTACAATGTTAATAGATCTAAAAATATTATTACAACCAATGATCTGTGTCCGTATATACATTCTTGTATTTTTTTTTCATTGACATGACAAGTTTGTAGAAGAACTTCTATAGTCACAGAAACATAATAACACGTTATTAATTTTGCCACCAAAATAGCACATTATTTAATTATTTCAAAAACACATTTTATTTAATAATCTTATTTTCTACCTTTTTTATTTGTGTATGTCAATATTATTATGTATTATTTCATAAGAGTTTCGACCAAAACCTTCTCCAATGTTATGTGTTATTTGCTGCTAAAAGACAATGACATTGTTATGTTGTTTTGAAAATTGAAGGTGCCGTTGTGAAGCTCCAATGTGACAACGCCAAACACAAATTGGTCCTTAAAGCCAAGACTGATAAGAATGGTTACTTCTATATTGGAGGCTCAAAGAACATTGTAGGTTATTCAACTCCTCGTTGCAGCGTTGTTTTAGATAGTGCACCAAAAGTACTAAAACCCTCAAATCTTCATGGTGGTCTTACTGGGGCTCTTCTTAAGCAAGTGAAACGATCGGTGTCTAAGGGGGTTTCTTTAAAACTCTACACTGTTGGACCGTTTGCATTTGAACCCAAATGTCATCATTAA

Protein sequence

>MS.gene88253.t1

MKKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNALHLKHCVQSYNVFDFLRDIVSRVPDYSHGHGHSEAGADDRAVPKRRKAAGDDCNDSDEEAKRSKMLELGHTGGTGRGRGRGRGRGRGRGARTAERETLHQQVESEPCTSIQQTSKDVPNPSMAIDNGSEPRELSKENIAAHEGSTQSLRNIDLNANLHENENKNNTSTDIPTQAPLPEPAATTDMQHEEIPGWSLSDVDKMAIDTLQLAANLVLARLDRKWHQFLSMEEILGQLAVLCIGAVVKLQCDNAKHKLVLKAKTDKNGYFYIGGSKNIVGYSTPRCSVVLDSAPKVLKPSNLHGGLTGALLKQVKRSVSKGVSLKLYTVGPFAFEPKCHH