AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene88260

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene88260.t1 MTR_4g033200 92.015 263 21 0 1 263 31 293 0.0 501
MS.gene88260.t1 MTR_4g033015 92.015 263 21 0 1 263 31 293 2.38e-180 500
MS.gene88260.t1 MTR_4g033150 88.593 263 30 0 1 263 31 293 4.74e-174 484
MS.gene88260.t1 MTR_0794s0020 89.041 219 24 0 1 219 31 249 2.26e-144 404
MS.gene88260.t1 MTR_4g088200 74.905 263 64 1 1 263 31 291 6.19e-144 408
MS.gene88260.t1 MTR_4g033170 74.609 256 59 1 1 256 31 280 5.88e-142 402
MS.gene88260.t1 MTR_4g033085 74.409 254 59 1 1 254 31 278 2.84e-139 396
MS.gene88260.t1 MTR_4g088190 76.894 264 60 1 1 263 31 294 2.06e-135 386
MS.gene88260.t1 MTR_7g014570 51.331 263 118 3 1 263 31 283 2.62e-88 266
MS.gene88260.t1 MTR_5g074600 49.242 264 127 4 1 263 31 288 9.23e-86 260
MS.gene88260.t1 MTR_5g074680 49.621 264 126 4 1 263 32 289 1.32e-85 259
MS.gene88260.t1 MTR_7g014510 48.669 263 130 3 1 263 31 288 2.31e-85 259
MS.gene88260.t1 MTR_1g076940 48.120 266 131 5 1 263 31 292 1.95e-82 251
MS.gene88260.t1 MTR_5g074580 47.727 264 131 4 1 263 32 289 1.89e-81 249
MS.gene88260.t1 MTR_7g024500 46.388 263 129 4 1 263 30 280 9.14e-80 244
MS.gene88260.t1 MTR_7g024520 48.289 263 124 4 1 263 30 280 3.67e-79 243
MS.gene88260.t1 MTR_4g088345 50.379 264 122 4 1 263 31 286 8.67e-79 242
MS.gene88260.t1 MTR_4g088340 49.242 264 125 4 1 263 8 263 1.13e-76 236
MS.gene88260.t1 MTR_5g074610 47.148 263 106 3 1 263 27 256 1.21e-76 235
MS.gene88260.t1 MTR_4g079160 45.455 264 135 3 1 263 30 285 1.28e-75 234
MS.gene88260.t1 MTR_5g074540 44.318 264 122 5 1 263 31 270 1.90e-72 225
MS.gene88260.t1 MTR_1g076930 44.726 237 120 6 1 233 8 237 2.24e-59 189
MS.gene88260.t1 MTR_3g083620 37.931 261 151 6 2 261 39 289 3.06e-49 166
MS.gene88260.t1 MTR_0079s0070 36.364 264 158 5 1 261 8 264 1.94e-45 155
MS.gene88260.t1 MTR_4g038440 36.364 264 158 5 1 261 42 298 4.07e-45 155
MS.gene88260.t1 MTR_0017s0100 35.985 264 159 5 1 261 42 298 2.55e-44 153
MS.gene88260.t1 MTR_7g012090 32.090 268 168 6 2 259 40 303 8.38e-39 139
MS.gene88260.t1 MTR_7g011990 32.463 268 159 7 2 259 40 295 3.57e-38 137
MS.gene88260.t1 MTR_7g011900 33.080 263 167 6 2 259 40 298 4.53e-38 137
MS.gene88260.t1 MTR_7g012070 31.716 268 169 7 2 259 40 303 1.51e-37 136
MS.gene88260.t1 MTR_7g012020 32.319 263 169 6 2 259 39 297 1.61e-37 135
MS.gene88260.t1 MTR_5g098170 35.955 267 155 10 1 259 33 291 2.30e-37 135
MS.gene88260.t1 MTR_7g012040 32.443 262 169 6 2 259 39 296 3.47e-37 135
MS.gene88260.t1 MTR_1g036460 32.576 264 167 6 3 259 38 297 4.58e-36 132
MS.gene88260.t1 MTR_8g068870 33.585 265 165 7 1 259 32 291 1.95e-35 130
MS.gene88260.t1 MTR_1g096310 32.453 265 168 6 2 259 40 300 2.58e-35 130
MS.gene88260.t1 MTR_0591s0010 34.091 264 165 6 1 259 46 305 4.05e-35 129
MS.gene88260.t1 MTR_7g118320 33.585 265 165 8 1 259 31 290 4.41e-35 129
MS.gene88260.t1 MTR_3g092900 33.840 263 165 6 1 259 34 291 1.24e-34 128
MS.gene88260.t1 MTR_2g055940 32.319 263 168 7 2 259 34 291 1.43e-34 127
MS.gene88260.t1 MTR_8g068690 32.955 264 168 6 1 259 45 304 7.64e-34 126
MS.gene88260.t1 MTR_1g036490 32.197 264 168 6 3 259 38 297 2.01e-33 125
MS.gene88260.t1 MTR_8g068750 32.576 264 169 6 1 259 46 305 3.68e-33 124
MS.gene88260.t1 MTR_7g118300 32.959 267 161 6 1 259 47 303 5.23e-33 124
MS.gene88260.t1 MTR_4g038440 33.617 235 146 5 2 233 43 270 1.99e-31 117
MS.gene88260.t1 MTR_2g072790 33.333 264 162 6 1 259 27 281 6.15e-31 118
MS.gene88260.t1 MTR_8g068570 32.075 265 142 9 1 259 46 278 2.33e-30 115
MS.gene88260.t1 MTR_8g024160 35.751 193 119 3 68 259 68 256 3.61e-30 115
MS.gene88260.t1 MTR_1g036510 31.780 236 155 5 26 259 80 311 7.39e-30 115
MS.gene88260.t1 MTR_3g021440 32.443 262 169 6 2 259 42 299 2.51e-29 114
MS.gene88260.t1 MTR_7g012020 31.120 241 157 6 2 237 39 275 5.28e-29 111
MS.gene88260.t1 MTR_3g096050 31.818 264 165 8 2 259 31 285 1.80e-27 108
MS.gene88260.t1 MTR_3g021430 30.534 262 174 6 2 259 29 286 2.39e-27 108
MS.gene88260.t1 MTR_6g078850 28.195 266 180 6 1 259 50 311 2.94e-25 104
MS.gene88260.t1 MTR_3g096070 30.153 262 149 7 2 259 31 262 1.33e-24 100
MS.gene88260.t1 MTR_8g068730 30.189 265 142 7 1 259 46 273 3.45e-24 99.8
MS.gene88260.t1 MTR_8g068690 29.461 241 161 6 1 236 45 281 1.02e-21 92.0
MS.gene88260.t1 MTR_1g036510 30.952 210 139 5 26 233 80 285 1.22e-21 92.0
MS.gene88260.t1 MTR_3g096050 31.092 238 149 8 2 233 31 259 1.02e-20 89.0
MS.gene88260.t1 MTR_8g068740 28.889 270 147 8 1 262 46 278 1.47e-20 88.6
MS.gene88260.t1 MTR_7g012020 30.952 210 136 6 2 206 39 244 3.31e-20 87.4
MS.gene88260.t1 MTR_8g068600 28.755 233 155 8 8 234 27 254 3.85e-18 82.0
MS.gene88260.t1 MTR_8g068620 37.391 115 68 3 123 236 2 113 1.03e-16 74.3
MS.gene88260.t1 MTR_1g036510 28.962 183 124 5 26 206 80 258 1.93e-13 68.9
MS.gene88260.t1 MTR_1g050220 38.043 92 47 1 168 259 151 232 3.97e-13 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene88260.t1 AT5G54160 34.483 261 164 5 1 259 34 289 4.90e-39 139
MS.gene88260.t1 AT1G77520 33.818 275 156 7 1 259 44 308 7.65e-37 134
MS.gene88260.t1 AT4G35150 32.296 257 124 7 2 255 31 240 4.73e-34 125
MS.gene88260.t1 AT4G35160 34.470 264 152 8 2 255 45 297 1.55e-33 125
MS.gene88260.t1 AT3G53140 33.086 269 161 8 1 259 27 286 1.29e-32 122
MS.gene88260.t1 AT1G51990 30.682 264 170 6 3 259 32 289 1.93e-32 122
MS.gene88260.t1 AT1G51990 30.712 267 166 7 3 259 32 289 1.01e-30 117
MS.gene88260.t1 AT1G77530 33.457 269 165 6 1 259 44 308 4.89e-29 113
MS.gene88260.t1 AT5G53810 31.111 270 171 6 1 259 40 305 8.48e-29 112
MS.gene88260.t1 AT1G33030 31.343 268 165 10 1 259 21 278 3.08e-28 110
MS.gene88260.t1 AT1G63140 31.852 270 168 7 1 259 44 308 2.67e-27 108
MS.gene88260.t1 AT1G63140 31.852 270 168 7 1 259 64 328 3.38e-27 108
MS.gene88260.t1 AT1G62900 41.026 117 69 0 143 259 16 132 1.21e-19 84.7
MS.gene88260.t1 AT1G76790 28.417 278 165 9 1 259 30 292 3.90e-18 83.2
MS.gene88260.t1 AT5G37170 35.294 119 76 1 142 259 43 161 4.83e-18 80.9
MS.gene88260.t1 AT1G33030 30.165 242 150 10 1 233 21 252 6.12e-18 81.3
MS.gene88260.t1 AT1G33030 30.165 242 150 10 1 233 21 252 7.49e-18 81.3
MS.gene88260.t1 AT5G37170 35.294 119 76 1 142 259 143 261 7.99e-18 82.0
MS.gene88260.t1 AT1G21130 27.636 275 169 9 1 259 40 300 4.32e-17 80.5
MS.gene88260.t1 AT5G37170 40.000 100 56 2 164 259 14 113 6.36e-17 77.0
MS.gene88260.t1 AT1G21100 27.106 273 173 8 1 259 40 300 1.69e-16 78.6
MS.gene88260.t1 AT1G63140 29.098 244 157 7 1 233 64 302 3.63e-16 77.0
MS.gene88260.t1 AT1G21120 26.374 273 175 8 1 259 40 300 7.88e-16 76.6
MS.gene88260.t1 AT1G21110 26.007 273 176 8 1 259 40 300 9.11e-16 76.6
MS.gene88260.t1 AT1G21120 28.625 269 174 7 1 259 88 348 1.56e-15 76.3

Find 49 sgRNAs with CRISPR-Local

Find 80 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCGCAAGAGGCGAGTCATTT+TGG 0.211023 4.3:-67047259 MS.gene88260:CDS
CTCAGTGAGCCATTTCTTAG+AGG 0.316815 4.3:+67047307 None:intergenic
TAGCCAAGTGTTTGAAGGTT+TGG 0.322024 4.3:-67047138 MS.gene88260:CDS
TACAGTGGATTCTGCATGAT+TGG 0.329305 4.3:-67046466 MS.gene88260:intron
TGAATTGTCCTTGAAGATAT+TGG 0.335230 4.3:-67046438 MS.gene88260:CDS
TACAGGACACTAACTTTAGA+AGG 0.365683 4.3:+67047521 None:intergenic
GCTAATTCAGTAAGAGTCAT+TGG 0.368956 4.3:+67047563 None:intergenic
AACGAAAATTTGAAATTTGT+TGG 0.401585 4.3:-67046996 MS.gene88260:CDS
TGTTTGTCACCATTTGTTAC+CGG 0.405515 4.3:-67047365 MS.gene88260:CDS
GCAGTTCTCCAATATCTTCA+AGG 0.406503 4.3:+67046430 None:intergenic
GTTTGAAGGTTTGGAGTCTC+TGG 0.414653 4.3:-67047129 MS.gene88260:CDS
TTAGGTGAGGAAAAGTTTCA+TGG 0.421372 4.3:+67047066 None:intergenic
GAGTATAGCCAAGTGTTTGA+AGG 0.431457 4.3:-67047143 MS.gene88260:CDS
CCACTGATGAGAAGCATTGA+AGG 0.442792 4.3:+67047398 None:intergenic
TGTGGTACTCCTCTAAGAAA+TGG 0.454917 4.3:-67047316 MS.gene88260:CDS
GTTGATGTTGGAGGTGGCAC+AGG 0.461040 4.3:-67047107 MS.gene88260:CDS
ATTTCAGGAAAAGGGACAAA+AGG 0.472680 4.3:-67046398 MS.gene88260:CDS
TTGGAGTCTCTGGTTGATGT+TGG 0.495110 4.3:-67047119 MS.gene88260:CDS
GAAAATTTGAAATTTGTTGG+TGG 0.495217 4.3:-67046993 MS.gene88260:CDS
GAGTCTCTGGTTGATGTTGG+AGG 0.503583 4.3:-67047116 MS.gene88260:CDS
ACACTGATGAATGGCAAAGA+AGG 0.516027 4.3:-67047452 MS.gene88260:CDS
GATGTTGGAGGTGGCACAGG+AGG 0.520874 4.3:-67047104 MS.gene88260:CDS
CTCAAATCAGCCGTGGAGCT+AGG 0.521896 4.3:-67047617 MS.gene88260:CDS
TGAAGCGATCCGGTAACAAA+TGG 0.526003 4.3:+67047356 None:intergenic
CACGGCTGATTTGAGTGCCA+TGG 0.545739 4.3:+67047625 None:intergenic
AGTCTCTTTGAGAGCGCAAG+AGG 0.547483 4.3:-67047272 MS.gene88260:CDS
ACGACATGGATGAAGCGATC+CGG 0.554100 4.3:+67047346 None:intergenic
TTGAGTAAAACAGCATCTGC+AGG 0.557051 4.3:+67046948 None:intergenic
GCAAGCGCAAGAGACGATAC+AGG 0.558531 4.3:+67047504 None:intergenic
ATCTGCTATGCCTAGCTCCA+CGG 0.571981 4.3:+67047607 None:intergenic
CCTTCAATGCTTCTCATCAG+TGG 0.573536 4.3:-67047398 MS.gene88260:CDS
GATTTGAGAATCAGCTGCCA+TGG 0.583476 4.3:+67047184 None:intergenic
TCTCTGGTTGATGTTGGAGG+TGG 0.586831 4.3:-67047113 MS.gene88260:CDS
TACCACATGTTGAGACGACA+TGG 0.595315 4.3:+67047332 None:intergenic
ATCCATGTCGTCTCAACATG+TGG 0.596571 4.3:-67047334 MS.gene88260:CDS
GAGTATGTTTCAAGATGCCA+TGG 0.599550 4.3:-67047201 MS.gene88260:CDS
CATAGTATTTGACCAACCAC+AGG 0.602779 4.3:-67047039 MS.gene88260:CDS
ACTCCAAACCTTCAAACACT+TGG 0.605410 4.3:+67047135 None:intergenic
TTGCGCTTGCTAACACACAA+TGG 0.607728 4.3:-67047491 MS.gene88260:CDS
GGACACTAACTTTAGAAGGG+TGG 0.621869 4.3:+67047525 None:intergenic
GAAATGGCTCACTGAGGACA+AGG 0.624424 4.3:-67047300 MS.gene88260:CDS
AGTAAAACAGCATCTGCAGG+AGG 0.624714 4.3:+67046951 None:intergenic
AGGAAAAGGGACAAAAGGAA+AGG 0.628316 4.3:-67046393 None:intergenic
CATGGCACTCAAATCAGCCG+TGG 0.637083 4.3:-67047624 MS.gene88260:CDS
GCAGATGCAATCCACAACCA+TGG 0.642290 4.3:-67047590 MS.gene88260:CDS
ACAGGACACTAACTTTAGAA+GGG 0.644029 4.3:+67047522 None:intergenic
CTGATGAGAAGCATTGAAGG+AGG 0.666811 4.3:+67047401 None:intergenic
GTAAAACAGCATCTGCAGGA+GGG 0.681270 4.3:+67046952 None:intergenic
CTCTAAGAAATGGCTCACTG+AGG 0.732533 4.3:-67047306 MS.gene88260:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GAGTTAAAGATATATTTTTT+GGG - chr4.3:67047114-67047133 MS.gene88260:CDS 15.0%
!!! GATAAAATATTTTTTTACAG+TGG - chr4.3:67047536-67047555 MS.gene88260:CDS 15.0%
!!! TGAGTTAAAGATATATTTTT+TGG - chr4.3:67047113-67047132 MS.gene88260:CDS 15.0%
!! ACTTAAAAAAGTAATTGAAC+CGG - chr4.3:67047268-67047287 MS.gene88260:CDS 20.0%
!! CTAATTAATCTTTGCAATAA+AGG - chr4.3:67047442-67047461 MS.gene88260:CDS 20.0%
!! TGTTCATTATCTTATATCAA+CGG + chr4.3:67047353-67047372 None:intergenic 20.0%
!!! AACGAAAATTTGAAATTTGT+TGG - chr4.3:67047021-67047040 MS.gene88260:CDS 20.0%
!!! GAGTAATTTTCTTATGTTAT+TGG - chr4.3:67047389-67047408 MS.gene88260:CDS 20.0%
! TAATTAGTCATCAACTAAAC+TGG + chr4.3:67047429-67047448 None:intergenic 25.0%
!! AAAAAAGCTATTTCAGGAAA+AGG - chr4.3:67047610-67047629 MS.gene88260:CDS 25.0%
!! AAAAAGCTATTTCAGGAAAA+GGG - chr4.3:67047611-67047630 MS.gene88260:CDS 25.0%
!!! GAAAATTTGAAATTTGTTGG+TGG - chr4.3:67047024-67047043 MS.gene88260:CDS 25.0%
TGAATTGTCCTTGAAGATAT+TGG - chr4.3:67047579-67047598 MS.gene88260:CDS 30.0%
! AACTGCAAAAAAGCTATTTC+AGG - chr4.3:67047604-67047623 MS.gene88260:CDS 30.0%
! GGTCAAATACTATGCATTTT+AGG + chr4.3:67046972-67046991 None:intergenic 30.0%
!! AATACTATGCATTTTAGGTG+AGG + chr4.3:67046967-67046986 None:intergenic 30.0%
ACCGGTCTTAAAATTGTCAA+CGG - chr4.3:67047286-67047305 MS.gene88260:CDS 35.0%
ATTTCAGGAAAAGGGACAAA+AGG - chr4.3:67047619-67047638 MS.gene88260:CDS 35.0%
CAGGTTGTAAAAAACTTGTC+TGG - chr4.3:67046997-67047016 MS.gene88260:CDS 35.0%
GCAAAAACAACACTGATGAA+TGG - chr4.3:67046556-67046575 MS.gene88260:intron 35.0%
GCTAATTCAGTAAGAGTCAT+TGG + chr4.3:67046457-67046476 None:intergenic 35.0%
TACAGGACACTAACTTTAGA+AGG + chr4.3:67046499-67046518 None:intergenic 35.0%
TTAGGTGAGGAAAAGTTTCA+TGG + chr4.3:67046954-67046973 None:intergenic 35.0%
! ACAGGACACTAACTTTAGAA+GGG + chr4.3:67046498-67046517 None:intergenic 35.0%
! TGTTTGTCACCATTTGTTAC+CGG - chr4.3:67046652-67046671 MS.gene88260:intron 35.0%
!!! AGTTTTTTACAACCTGTGGT+TGG + chr4.3:67046993-67047012 None:intergenic 35.0%
!!! GACAAGTTTTTTACAACCTG+TGG + chr4.3:67046997-67047016 None:intergenic 35.0%
!!! TAAGAGTCATTGGTTTTCCA+TGG + chr4.3:67046447-67046466 None:intergenic 35.0%
ACACTGATGAATGGCAAAGA+AGG - chr4.3:67046565-67046584 MS.gene88260:intron 40.0%
ACTCCAAACCTTCAAACACT+TGG + chr4.3:67046885-67046904 None:intergenic 40.0%
AGTTAACTGCCGCTGATATA+AGG + chr4.3:67047188-67047207 None:intergenic 40.0%
CATAGTATTTGACCAACCAC+AGG - chr4.3:67046978-67046997 MS.gene88260:CDS 40.0%
GAGTATAGCCAAGTGTTTGA+AGG - chr4.3:67046874-67046893 MS.gene88260:intron 40.0%
GAGTATGTTTCAAGATGCCA+TGG - chr4.3:67046816-67046835 MS.gene88260:intron 40.0%
GCAGTTCTCCAATATCTTCA+AGG + chr4.3:67047590-67047609 None:intergenic 40.0%
GTTAACTGCCGCTGATATAA+GGG + chr4.3:67047187-67047206 None:intergenic 40.0%
TAGCCAAGTGTTTGAAGGTT+TGG - chr4.3:67046879-67046898 MS.gene88260:intron 40.0%
TTGAGTAAAACAGCATCTGC+AGG + chr4.3:67047072-67047091 None:intergenic 40.0%
! AGGGAACGAGCAATTTTACA+AGG + chr4.3:67047168-67047187 None:intergenic 40.0%
! GGGAACGAGCAATTTTACAA+GGG + chr4.3:67047167-67047186 None:intergenic 40.0%
! TACAGTGGATTCTGCATGAT+TGG - chr4.3:67047551-67047570 MS.gene88260:CDS 40.0%
! TGTGGTACTCCTCTAAGAAA+TGG - chr4.3:67046701-67046720 MS.gene88260:intron 40.0%
!! TTCGATCATAAAAGCGTCAG+TGG + chr4.3:67047241-67047260 None:intergenic 40.0%
!!! GCCGTTGACAATTTTAAGAC+CGG + chr4.3:67047290-67047309 None:intergenic 40.0%
!!! TCATTGGTTTTCCATGGTTG+TGG + chr4.3:67046441-67046460 None:intergenic 40.0%
!!! TGCAGATGCTGTTTTACTCA+AGG - chr4.3:67047071-67047090 MS.gene88260:CDS 40.0%
AGTAAAACAGCATCTGCAGG+AGG + chr4.3:67047069-67047088 None:intergenic 45.0%
ATCCATGTCGTCTCAACATG+TGG - chr4.3:67046683-67046702 MS.gene88260:intron 45.0%
CCTTCAATGCTTCTCATCAG+TGG - chr4.3:67046619-67046638 MS.gene88260:intron 45.0%
CTCAGTGAGCCATTTCTTAG+AGG + chr4.3:67046713-67046732 None:intergenic 45.0%
GATTTGAGAATCAGCTGCCA+TGG + chr4.3:67046836-67046855 None:intergenic 45.0%
GTAAAACAGCATCTGCAGGA+GGG + chr4.3:67047068-67047087 None:intergenic 45.0%
TACCACATGTTGAGACGACA+TGG + chr4.3:67046688-67046707 None:intergenic 45.0%
TATCGCTGAAAAATGCCGAG+CGG + chr4.3:67047212-67047231 None:intergenic 45.0%
TGAAGCGATCCGGTAACAAA+TGG + chr4.3:67046664-67046683 None:intergenic 45.0%
TGCTCGTTCCCTTATATCAG+CGG - chr4.3:67047176-67047195 MS.gene88260:CDS 45.0%
! CTCTAAGAAATGGCTCACTG+AGG - chr4.3:67046711-67046730 MS.gene88260:intron 45.0%
! GGACACTAACTTTAGAAGGG+TGG + chr4.3:67046495-67046514 None:intergenic 45.0%
! GTTTGAAGGTTTGGAGTCTC+TGG - chr4.3:67046888-67046907 MS.gene88260:intron 45.0%
! TTGCGCTTGCTAACACACAA+TGG - chr4.3:67046526-67046545 MS.gene88260:intron 45.0%
! TTGGAGTCTCTGGTTGATGT+TGG - chr4.3:67046898-67046917 MS.gene88260:intron 45.0%
!! CCACTGATGAGAAGCATTGA+AGG + chr4.3:67046622-67046641 None:intergenic 45.0%
!! CTGATGAGAAGCATTGAAGG+AGG + chr4.3:67046619-67046638 None:intergenic 45.0%
ACGACATGGATGAAGCGATC+CGG + chr4.3:67046674-67046693 None:intergenic 50.0%
ATCTGCTATGCCTAGCTCCA+CGG + chr4.3:67046413-67046432 None:intergenic 50.0%
GAAATGGCTCACTGAGGACA+AGG - chr4.3:67046717-67046736 MS.gene88260:intron 50.0%
GCAGATGCAATCCACAACCA+TGG - chr4.3:67046427-67046446 MS.gene88260:CDS 50.0%
TGCCACTGAAAAATGCCGAG+CGG - chr4.3:67047317-67047336 MS.gene88260:CDS 50.0%
! AGTCTCTTTGAGAGCGCAAG+AGG - chr4.3:67046745-67046764 MS.gene88260:intron 50.0%
! GAGTCTCTGGTTGATGTTGG+AGG - chr4.3:67046901-67046920 MS.gene88260:intron 50.0%
! TCTCTGGTTGATGTTGGAGG+TGG - chr4.3:67046904-67046923 MS.gene88260:intron 50.0%
!! CGCAAGAGGCGAGTCATTTT+GGG - chr4.3:67046759-67046778 MS.gene88260:intron 50.0%
AACGGCAGTTAACTGCCGCT+CGG + chr4.3:67047335-67047354 None:intergenic 55.0%
AGCGGCAGTTAACTACCGCT+CGG - chr4.3:67047194-67047213 MS.gene88260:CDS 55.0%
CTCAAATCAGCCGTGGAGCT+AGG - chr4.3:67046400-67046419 MS.gene88260:CDS 55.0%
GCAAGCGCAAGAGACGATAC+AGG + chr4.3:67046516-67046535 None:intergenic 55.0%
GTTGATGTTGGAGGTGGCAC+AGG - chr4.3:67046910-67046929 MS.gene88260:intron 55.0%
! GCGCAAGAGGCGAGTCATTT+TGG - chr4.3:67046758-67046777 MS.gene88260:intron 55.0%
!! TGCCGCTCGGCATTTTTCAG+TGG + chr4.3:67047322-67047341 None:intergenic 55.0%
GATGTTGGAGGTGGCACAGG+AGG - chr4.3:67046913-67046932 MS.gene88260:intron 60.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 67046394 67047645 67046394 ID=MS.gene88260
chr4.3 mRNA 67046394 67047645 67046394 ID=MS.gene88260.t1;Parent=MS.gene88260
chr4.3 exon 67046947 67047645 67046947 ID=MS.gene88260.t1.exon1;Parent=MS.gene88260.t1
chr4.3 CDS 67046947 67047645 67046947 ID=cds.MS.gene88260.t1;Parent=MS.gene88260.t1
chr4.3 exon 67046394 67046483 67046394 ID=MS.gene88260.t1.exon2;Parent=MS.gene88260.t1
chr4.3 CDS 67046394 67046483 67046394 ID=cds.MS.gene88260.t1;Parent=MS.gene88260.t1
Gene Sequence

>MS.gene88260

ATGGCACTCAAATCAGCCGTGGAGCTAGGCATAGCAGATGCAATCCACAACCATGGAAAACCAATGACTCTTACTGAATTAGCTTCATCTTTGAAACTCCACCCTTCTAAAGTTAGTGTCCTGTATCGTCTCTTGCGCTTGCTAACACACAATGGTTTCTTTGCAAAAACAACACTGATGAATGGCAAAGAAGGAGAAGAAGAAACAACATATTCTCTCACTCCTCCTTCAATGCTTCTCATCAGTGGCAAATCAACATGTTTGTCACCATTTGTTACCGGATCGCTTCATCCATGTCGTCTCAACATGTGGTACTCCTCTAAGAAATGGCTCACTGAGGACAAGGAACTCAGTCTCTTTGAGAGCGCAAGAGGCGAGTCATTTTGGGACTATCTTAACAAAGATTCTGAATCTGATGAACTGAGTATGTTTCAAGATGCCATGGCAGCTGATTCTCAAATCTTTAACATTGCACTAAAAGAGTATAGCCAAGTGTTTGAAGGTTTGGAGTCTCTGGTTGATGTTGGAGGTGGCACAGGAGGTGTCACAAAACTTATCCATGAAACTTTTCCTCACCTAAAATGCATAGTATTTGACCAACCACAGGTTGTAAAAAACTTGTCTGGAAACGAAAATTTGAAATTTGTTGGTGGAGATATGTTCGAATCTATCCCTCCTGCAGATGCTGTTTTACTCAAGGTACGTTCACTAAATGTTATTGAGTTAAAGATATATTTTTTGGGTAATTATGTTATGAAAATTAATCTTCTCCCTTGTAAAATTGCTCGTTCCCTTATATCAGCGGCAGTTAACTACCGCTCGGCATTTTTCAGCGATAGAACTACCACTGACGCTTTTATGATCGAATGAACTGACTTAAAAAAGTAATTGAACCGGTCTTAAAATTGTCAACGGCAATTAGCTGCCACTGAAAAATGCCGAGCGGCAGTTAACTGCCGTTGATATAAGATAATGAACAATTTCACAAGTGAGAAGAGTAATTTTCTTATGTTATTGGTGCGAAGTATTTTACCAGTTTAGTTGATGACTAATTAATCTTTGCAATAAAGGAGAACTAATATACTCTTAAACAACATATTTTAGCAAAGCTTGATATTTTGTATAGATTTATTAACTAAATAGATAAAATATTTTTTTACAGTGGATTCTGCATGATTGGAATGATGAATTGTCCTTGAAGATATTGGAGAACTGCAAAAAAGCTATTTCAGGAAAAGGGACAAAAGGAAAG
Protein sequence

>MS.gene88260.t1

MALKSAVELGIADAIHNHGKPMTLTELASSLKLHPSKVSVLYRLLRLLTHNGFFAKTTLMNGKEGEEETTYSLTPPSMLLISGKSTCLSPFVTGSLHPCRLNMWYSSKKWLTEDKELSLFESARGESFWDYLNKDSESDELSMFQDAMAADSQIFNIALKEYSQVFEGLESLVDVGGGTGGVTKLIHETFPHLKCIVFDQPQVVKNLSGNENLKFVGGDMFESIPPADAVLLKWILHDWNDELSLKILENCKKAISGKGTKGK