AlfalfaGEDB | MS.gene88806

M. sativa cultivar XinJiangDaYe / MS.gene88806

KEGG: -
GO: GO:0003674 GO:0003824 GO:0005488 GO:0005506 GO:0008150 GO:0008152 GO:0016491 GO:0016705 GO:0020037 GO:0043167 GO:0043169 GO:0046872 GO:0046906 GO:0046914 GO:0048037 GO:0055114 GO:0097159 GO:1901363
PFAM: PF00067.25

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene88806.t1	XP_003615665.1	81.4	161	30	0	1	161	70	230	1.90E-66	261.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene88806.t1	H2DH18	47.8	161	84	0	1	161	68	228	9.1e-41	167.9

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene88806.t1	G7KE79	81.4	161	30	0	1	161	70	230	1.4e-66	261.9

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049993	MS.gene88806	0.80326	3.79E-49	-1.69E-46
MS.gene051525	MS.gene88806	0.801878	7.31E-49	-1.69E-46
MS.gene052011	MS.gene88806	-0.824684	7.07E-54	-1.69E-46
MS.gene052253	MS.gene88806	0.807284	5.45E-50	-1.69E-46
MS.gene052589	MS.gene88806	0.816869	4.43E-52	-1.69E-46
MS.gene054102	MS.gene88806	0.822001	2.99E-53	-1.69E-46
MS.gene054110	MS.gene88806	0.807174	5.75E-50	-1.69E-46
MS.gene054183	MS.gene88806	0.823767	1.16E-53	-1.69E-46
MS.gene054349	MS.gene88806	0.808691	2.73E-50	-1.69E-46
MS.gene054719	MS.gene88806	0.827607	1.43E-54	-1.69E-46
MS.gene056659	MS.gene88806	0.812486	4.14E-51	-1.69E-46
MS.gene05702	MS.gene88806	0.801384	9.24E-49	-1.69E-46
MS.gene057749	MS.gene88806	0.833788	4.36E-56	-1.69E-46
MS.gene057823	MS.gene88806	0.831532	1.58E-55	-1.69E-46
MS.gene057826	MS.gene88806	0.825572	4.36E-54	-1.69E-46
MS.gene058142	MS.gene88806	0.801752	7.76E-49	-1.69E-46
MS.gene058444	MS.gene88806	0.802628	5.13E-49	-1.69E-46
MS.gene059011	MS.gene88806	0.817431	3.31E-52	-1.69E-46
MS.gene059420	MS.gene88806	0.831098	2.02E-55	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene88806.t1	MTR_5g070710	77.019	161	37	0	1	161	71	231	6.35e-84	255
MS.gene88806.t1	MTR_5g470730	75.155	161	40	0	1	161	72	232	1.74e-82	249
MS.gene88806.t1	MTR_5g070690	81.366	161	30	0	1	161	70	230	3.31e-82	251
MS.gene88806.t1	MTR_5g070800	81.366	161	30	0	1	161	70	230	3.31e-82	251
MS.gene88806.t1	MTR_5g070850	72.671	161	44	0	1	161	72	232	3.81e-79	243
MS.gene88806.t1	MTR_5g070700	78.882	161	34	0	1	161	72	232	1.35e-77	239
MS.gene88806.t1	MTR_5g070920	78.261	161	35	0	1	161	72	232	1.25e-76	237
MS.gene88806.t1	MTR_5g070980	75.949	158	38	0	1	158	72	229	1.21e-74	223
MS.gene88806.t1	MTR_8g104080	59.006	161	66	0	1	161	71	231	4.38e-66	203
MS.gene88806.t1	MTR_6g084770	57.764	161	68	0	1	161	72	232	3.82e-61	196
MS.gene88806.t1	MTR_5g070830	77.193	114	26	0	48	161	229	342	1.85e-47	162
MS.gene88806.t1	MTR_6g084910	51.667	120	58	0	42	161	1	120	3.32e-40	132
MS.gene88806.t1	MTR_2g065360	41.566	166	91	2	1	161	42	206	3.81e-38	135
MS.gene88806.t1	MTR_8g091690	41.566	166	89	3	1	161	63	225	4.80e-37	132
MS.gene88806.t1	MTR_6g084760	58.163	98	40	1	42	139	1	97	6.44e-34	115
MS.gene88806.t1	MTR_3g058230	40.506	158	89	2	1	155	1	156	4.16e-32	119
MS.gene88806.t1	MTR_3g058400	40.373	161	91	2	1	158	73	231	6.09e-31	116
MS.gene88806.t1	MTR_3g057900	39.873	158	90	2	1	155	72	227	6.11e-31	116
MS.gene88806.t1	MTR_3g058210	39.873	158	90	2	1	155	73	228	1.29e-30	115
MS.gene88806.t1	MTR_3g058240	39.241	158	91	2	1	155	37	192	2.89e-30	114
MS.gene88806.t1	MTR_3g057980	37.255	153	94	1	1	153	72	222	5.00e-30	114
MS.gene88806.t1	MTR_3g058250	38.608	158	92	2	1	155	71	226	5.82e-30	114
MS.gene88806.t1	MTR_3g057970	39.873	158	90	2	1	155	69	224	7.21e-30	113
MS.gene88806.t1	MTR_3g058390	37.975	158	93	2	1	155	71	226	1.33e-29	112
MS.gene88806.t1	MTR_6g039630	36.601	153	95	1	1	153	70	220	1.59e-29	109
MS.gene88806.t1	MTR_3g057800	35.000	160	102	1	1	160	71	228	3.52e-29	111
MS.gene88806.t1	MTR_3g058060	38.509	161	94	2	1	158	74	232	3.91e-29	112
MS.gene88806.t1	MTR_3g058000	37.975	158	93	2	1	155	74	229	4.99e-29	111
MS.gene88806.t1	MTR_5g019010	32.500	160	106	1	1	160	72	229	5.78e-29	111
MS.gene88806.t1	MTR_1g023730	36.047	172	97	1	1	159	68	239	9.74e-29	110
MS.gene88806.t1	MTR_7g092620	31.325	166	108	2	1	161	69	233	1.17e-28	110
MS.gene88806.t1	MTR_0554s0020	37.342	158	94	2	1	155	73	228	3.49e-28	108
MS.gene88806.t1	MTR_5g018980	34.437	151	97	1	3	153	74	222	8.60e-28	107
MS.gene88806.t1	MTR_5g094660	37.908	153	93	1	1	153	75	225	2.21e-27	106
MS.gene88806.t1	MTR_5g094570	35.294	153	97	1	1	153	75	225	3.22e-27	106
MS.gene88806.t1	MTR_6g462640	35.948	153	96	1	1	153	71	221	4.96e-27	105
MS.gene88806.t1	MTR_3g058220	36.646	161	97	2	1	158	72	230	5.06e-27	105
MS.gene88806.t1	MTR_5g018990	32.026	153	102	1	1	153	73	223	6.03e-27	105
MS.gene88806.t1	MTR_3g057860	34.615	156	96	3	1	153	72	224	8.04e-27	105
MS.gene88806.t1	MTR_8g468780	34.161	161	99	2	1	155	1	160	2.07e-26	103
MS.gene88806.t1	MTR_8g020940	30.769	169	107	2	1	161	71	237	3.28e-26	103
MS.gene88806.t1	MTR_3g057910	33.333	153	100	1	1	153	73	223	3.62e-26	103
MS.gene88806.t1	MTR_6g035115	34.177	158	99	2	1	155	73	228	4.25e-26	103
MS.gene88806.t1	MTR_8g466180	35.294	153	97	1	1	153	70	220	6.00e-26	102
MS.gene88806.t1	MTR_1g035140	35.443	158	96	3	1	155	73	227	6.44e-26	102
MS.gene88806.t1	MTR_3g025260	31.765	170	107	1	1	161	67	236	7.74e-26	102
MS.gene88806.t1	MTR_1g023720	33.140	172	102	1	1	159	68	239	8.47e-26	102
MS.gene88806.t1	MTR_5g094550	33.987	153	99	1	1	153	75	225	1.06e-25	102
MS.gene88806.t1	MTR_2g010530	31.646	158	103	2	1	155	70	225	1.09e-25	102
MS.gene88806.t1	MTR_1g035190	36.709	158	94	3	1	155	56	210	1.32e-25	101
MS.gene88806.t1	MTR_0059s0170	36.478	159	93	5	1	155	73	227	1.49e-25	101
MS.gene88806.t1	MTR_4g048580	34.641	153	98	1	1	153	75	225	2.01e-25	101
MS.gene88806.t1	MTR_5g073250	35.443	158	100	1	1	158	75	230	2.78e-25	100
MS.gene88806.t1	MTR_1g023700	33.721	172	101	1	1	159	69	240	3.56e-25	100
MS.gene88806.t1	MTR_3g058110	35.948	153	96	1	1	153	74	224	4.11e-25	100
MS.gene88806.t1	MTR_0171s0010	33.333	159	101	2	1	155	72	229	4.13e-25	100
MS.gene88806.t1	MTR_4g109470	32.353	170	106	3	1	161	66	235	1.08e-24	99.4
MS.gene88806.t1	MTR_3g024520	31.977	172	104	2	1	161	67	236	2.28e-24	98.2
MS.gene88806.t1	MTR_3g025230	31.977	172	104	2	1	161	67	236	2.32e-24	98.2
MS.gene88806.t1	MTR_5g094840	33.544	158	100	2	1	155	80	235	2.54e-24	98.2
MS.gene88806.t1	MTR_4g104610	32.484	157	104	1	1	155	63	219	3.14e-24	97.8
MS.gene88806.t1	MTR_4g089020	33.333	156	100	2	1	155	65	217	3.17e-24	97.8
MS.gene88806.t1	MTR_8g020950	30.178	169	108	2	1	161	73	239	3.81e-24	97.8
MS.gene88806.t1	MTR_0171s0020	30.909	165	110	1	1	161	72	236	3.88e-24	97.8
MS.gene88806.t1	MTR_5g094540	33.333	153	100	1	1	153	75	225	4.17e-24	97.4
MS.gene88806.t1	MTR_1g442730	34.641	153	97	2	1	153	70	219	6.11e-24	97.1
MS.gene88806.t1	MTR_5g094520	33.987	153	99	1	1	153	1	151	6.52e-24	96.7
MS.gene88806.t1	MTR_5g094520	33.987	153	99	1	1	153	106	256	9.13e-24	96.7
MS.gene88806.t1	MTR_5g021390	33.750	160	102	3	3	161	81	237	1.20e-23	96.3
MS.gene88806.t1	MTR_3g058380	36.424	151	91	2	11	158	2	150	1.23e-23	95.9
MS.gene88806.t1	MTR_4g025950	28.659	164	112	1	1	159	65	228	1.69e-23	94.0
MS.gene88806.t1	MTR_8g076290	33.750	160	102	3	3	161	72	228	2.61e-23	95.5
MS.gene88806.t1	MTR_5g073320	33.333	153	100	1	1	153	76	226	3.79e-23	94.7
MS.gene88806.t1	MTR_4g104640	35.366	164	102	2	1	160	83	246	4.83e-23	94.7
MS.gene88806.t1	MTR_4g062510	29.940	167	109	2	1	161	72	236	6.61e-23	94.4
MS.gene88806.t1	MTR_3g436390	31.928	166	107	3	1	161	71	235	7.45e-23	94.0
MS.gene88806.t1	MTR_4g104540	31.056	161	108	2	1	158	1	161	7.66e-23	93.6
MS.gene88806.t1	MTR_3g076530	31.410	156	100	2	3	153	77	230	8.87e-23	94.0
MS.gene88806.t1	MTR_5g094560	32.026	153	102	1	1	153	75	225	1.02e-22	93.6
MS.gene88806.t1	MTR_1g107305	30.539	167	108	2	1	161	73	237	1.33e-22	92.4
MS.gene88806.t1	MTR_4g133750	28.758	153	107	1	1	153	75	225	1.70e-22	93.2
MS.gene88806.t1	MTR_3g020780	32.927	164	104	2	3	161	72	234	2.61e-22	92.4
MS.gene88806.t1	MTR_4g071710	30.864	162	104	3	3	161	74	230	2.68e-22	92.4
MS.gene88806.t1	MTR_4g025970	28.659	164	112	1	1	159	65	228	3.65e-22	92.0
MS.gene88806.t1	MTR_0022s0290	32.075	159	104	2	1	155	76	234	3.97e-22	92.0
MS.gene88806.t1	MTR_5g045770	27.607	163	114	1	1	159	65	227	4.47e-22	91.7
MS.gene88806.t1	MTR_4g062500	31.737	167	106	2	1	161	70	234	5.39e-22	91.7
MS.gene88806.t1	MTR_7g012330	28.834	163	112	1	1	159	70	232	6.53e-22	91.3
MS.gene88806.t1	MTR_5g095260	31.013	158	104	2	1	155	77	232	1.00e-21	90.9
MS.gene88806.t1	MTR_5g095290	29.747	158	106	2	1	155	77	232	1.04e-21	90.9
MS.gene88806.t1	MTR_5g018480	28.655	171	111	2	2	161	78	248	1.20e-21	89.4
MS.gene88806.t1	MTR_1g107295	30.539	167	108	2	1	161	73	237	1.23e-21	90.5
MS.gene88806.t1	MTR_4g025980	28.834	163	112	1	1	159	66	228	1.31e-21	90.5
MS.gene88806.t1	MTR_4g104550	30.435	161	102	2	1	155	63	219	2.97e-21	89.4
MS.gene88806.t1	MTR_8g469300	29.091	165	111	1	1	159	70	234	8.46e-21	88.2
MS.gene88806.t1	MTR_2g073420	31.515	165	109	1	1	161	79	243	1.99e-20	87.0
MS.gene88806.t1	MTR_5g094535	28.758	153	90	1	1	153	75	208	3.18e-20	84.0
MS.gene88806.t1	MTR_3g436540	28.313	166	114	1	1	161	75	240	3.92e-20	86.3
MS.gene88806.t1	MTR_6g035100	26.797	153	111	1	1	153	73	224	4.93e-20	85.9
MS.gene88806.t1	MTR_4g026050	27.607	163	114	1	1	159	65	227	6.02e-20	85.9
MS.gene88806.t1	MTR_6g034965	24.183	153	115	1	1	153	73	224	8.34e-20	85.5
MS.gene88806.t1	MTR_1g055325	29.697	165	112	1	1	161	89	253	1.00e-19	85.1
MS.gene88806.t1	MTR_4g089025	29.560	159	105	3	1	155	87	242	1.22e-19	85.1
MS.gene88806.t1	MTR_0171s0030	31.081	148	98	1	18	161	1	148	1.24e-19	84.7
MS.gene88806.t1	MTR_5g073020	30.818	159	106	1	3	157	71	229	1.65e-19	84.7
MS.gene88806.t1	MTR_1g031700	27.879	165	115	1	1	161	69	233	2.55e-19	84.0
MS.gene88806.t1	MTR_7g012860	28.221	163	113	1	1	159	69	231	3.01e-19	84.0
MS.gene88806.t1	MTR_0287s0060	28.221	163	113	1	1	159	69	231	3.01e-19	84.0
MS.gene88806.t1	MTR_5g023680	29.448	163	111	1	1	159	41	203	3.36e-19	83.6
MS.gene88806.t1	MTR_5g070685	86.047	43	6	0	1	43	73	115	3.49e-19	78.2
MS.gene88806.t1	MTR_4g089055	31.875	160	102	3	1	156	87	243	3.89e-19	83.6
MS.gene88806.t1	MTR_8g046210	28.485	165	114	1	1	161	76	240	7.73e-19	82.8
MS.gene88806.t1	MTR_0181s0030	29.518	166	111	2	1	161	69	233	9.35e-19	82.4
MS.gene88806.t1	MTR_4g104660	30.864	162	110	1	1	160	81	242	9.45e-19	82.4
MS.gene88806.t1	MTR_5g073230	32.680	153	86	3	1	153	78	213	2.05e-18	81.3
MS.gene88806.t1	MTR_7g056103	29.091	165	113	1	1	161	69	233	2.71e-18	81.3
MS.gene88806.t1	MTR_8g046240	28.485	165	114	1	1	161	76	240	4.13e-18	80.5
MS.gene88806.t1	MTR_5g072980	29.814	161	109	1	1	157	69	229	5.15e-18	80.5
MS.gene88806.t1	MTR_5g072930	29.814	161	109	1	1	157	69	229	5.15e-18	80.5
MS.gene88806.t1	MTR_1g103680	26.061	165	118	1	1	161	70	234	5.16e-18	80.1
MS.gene88806.t1	MTR_1g103670	27.879	165	115	1	1	161	69	233	5.31e-18	80.1
MS.gene88806.t1	MTR_4g026200	27.607	163	114	1	1	159	65	227	5.40e-18	80.1
MS.gene88806.t1	MTR_3g076560	30.909	165	104	3	3	160	88	249	9.96e-18	79.3
MS.gene88806.t1	MTR_4g089030	28.481	158	110	2	1	155	83	240	1.02e-17	79.3
MS.gene88806.t1	MTR_8g020960	26.036	169	115	2	1	161	72	238	2.03e-17	78.6
MS.gene88806.t1	MTR_4g026070	28.221	163	113	1	1	159	65	227	3.08e-17	77.0
MS.gene88806.t1	MTR_5g073240	45.333	75	41	0	1	75	119	193	3.17e-17	75.1
MS.gene88806.t1	MTR_1g097240	28.916	166	113	2	1	161	62	227	4.78e-17	77.4
MS.gene88806.t1	MTR_4g062530	30.323	155	102	3	1	155	70	218	5.79e-17	77.0
MS.gene88806.t1	MTR_4g102310	29.091	165	109	3	3	161	76	238	1.24e-16	76.3
MS.gene88806.t1	MTR_8g012585	29.480	173	110	3	1	161	9	181	2.21e-16	75.5
MS.gene88806.t1	MTR_2g437840	28.902	173	111	3	1	161	66	238	4.09e-16	74.7
MS.gene88806.t1	MTR_7g087520	28.931	159	105	2	3	153	74	232	6.39e-16	74.3
MS.gene88806.t1	MTR_4g102280	29.091	165	109	2	3	161	81	243	7.51e-16	73.9
MS.gene88806.t1	MTR_1g097220	26.380	163	112	3	1	158	100	259	1.11e-15	73.6
MS.gene88806.t1	MTR_4g133760	42.857	70	40	0	1	70	1	70	2.58e-15	72.4
MS.gene88806.t1	MTR_3g467220	27.485	171	111	2	3	161	85	254	2.80e-15	72.4
MS.gene88806.t1	MTR_8g012590	28.571	161	108	3	3	161	77	232	4.36e-15	72.0
MS.gene88806.t1	MTR_4g088425	26.471	170	107	4	1	160	76	237	5.78e-15	71.6
MS.gene88806.t1	MTR_2g450040	25.731	171	116	3	1	160	76	246	1.02e-14	70.9
MS.gene88806.t1	MTR_3g077460	33.065	124	65	1	1	124	42	147	1.30e-14	70.5
MS.gene88806.t1	MTR_5g007460	25.595	168	118	2	1	161	44	211	1.53e-14	70.5
MS.gene88806.t1	MTR_5g007450	25.455	165	112	2	1	161	77	234	2.23e-14	69.7
MS.gene88806.t1	MTR_5g007550	25.455	165	112	2	1	161	77	234	2.39e-14	69.7
MS.gene88806.t1	MTR_0608s0010	26.761	142	100	1	1	138	69	210	2.70e-14	69.3
MS.gene88806.t1	MTR_8g036185	28.788	132	90	2	23	150	92	223	3.46e-14	69.3
MS.gene88806.t1	MTR_8g091680	33.871	124	63	1	1	124	63	167	4.64e-14	68.9
MS.gene88806.t1	MTR_1g091023	27.607	163	116	1	1	161	69	231	4.66e-14	68.9
MS.gene88806.t1	MTR_4g088400	25.146	171	116	2	2	160	84	254	5.49e-14	68.9
MS.gene88806.t1	MTR_1g091003	26.994	163	117	1	1	161	69	231	6.33e-14	68.6
MS.gene88806.t1	MTR_7g092600	28.485	165	113	1	1	160	74	238	8.58e-14	68.2
MS.gene88806.t1	MTR_4g094772	25.786	159	116	2	2	159	70	227	1.02e-13	67.8
MS.gene88806.t1	MTR_5g094460	26.623	154	82	2	1	153	66	189	1.16e-13	67.8
MS.gene88806.t1	MTR_6g008500	24.468	188	113	3	2	160	75	262	1.37e-13	67.8
MS.gene88806.t1	MTR_4g035330	27.044	159	114	2	2	159	67	224	1.50e-13	67.4
MS.gene88806.t1	MTR_2g073480	32.110	109	74	0	1	109	1	109	1.56e-13	67.4
MS.gene88806.t1	MTR_5g095220	24.684	158	99	3	1	155	64	204	1.63e-13	67.4
MS.gene88806.t1	MTR_4g088160	25.157	159	111	4	2	158	72	224	1.81e-13	67.4
MS.gene88806.t1	MTR_2g073440	28.369	141	97	1	1	137	68	208	1.97e-13	67.0
MS.gene88806.t1	MTR_6g008620	24.719	178	112	3	1	159	78	252	1.98e-13	67.0
MS.gene88806.t1	MTR_1g091010	26.994	163	117	1	1	161	68	230	1.99e-13	67.0
MS.gene88806.t1	MTR_3g467200	27.586	174	107	3	3	161	90	259	2.35e-13	67.0
MS.gene88806.t1	MTR_7g027960	27.329	161	112	2	1	161	67	222	2.65e-13	66.6
MS.gene88806.t1	MTR_7g028020	27.329	161	112	2	1	161	67	222	3.25e-13	66.6
MS.gene88806.t1	MTR_4g094775	26.012	173	115	5	1	161	67	238	3.50e-13	66.2
MS.gene88806.t1	MTR_7g103450	28.824	170	107	3	3	161	83	249	7.86e-13	65.5
MS.gene88806.t1	MTR_4g078110	27.329	161	106	1	1	161	63	212	1.14e-12	65.1
MS.gene88806.t1	MTR_6g042540	27.528	178	108	3	1	160	71	245	1.76e-12	64.3
MS.gene88806.t1	MTR_3g076550	28.188	149	101	3	17	160	87	234	2.35e-12	63.9
MS.gene88806.t1	MTR_4g088170	23.418	158	115	3	2	158	72	224	2.57e-12	63.9
MS.gene88806.t1	MTR_4g471620	29.268	82	58	0	3	84	74	155	6.58e-12	61.2
MS.gene88806.t1	MTR_1g037370	26.380	163	116	1	1	159	66	228	7.08e-12	62.8
MS.gene88806.t1	MTR_6g022450	25.146	171	115	3	3	161	77	246	9.18e-12	62.4
MS.gene88806.t1	MTR_4g088195	23.899	159	113	4	2	158	72	224	9.56e-12	62.4
MS.gene88806.t1	MTR_5g094670	30.216	139	75	5	1	138	75	192	1.15e-11	61.2
MS.gene88806.t1	MTR_5g016410	23.392	171	120	3	1	160	67	237	1.17e-11	62.0
MS.gene88806.t1	MTR_1g111240	22.424	165	118	3	3	158	103	266	1.68e-11	61.6
MS.gene88806.t1	MTR_6g042610	22.857	175	120	3	1	160	71	245	2.08e-11	61.2
MS.gene88806.t1	MTR_3g465300	26.875	160	113	2	3	159	87	245	2.09e-11	61.2
MS.gene88806.t1	MTR_2g437880	22.727	176	118	3	2	161	68	241	2.12e-11	61.2
MS.gene88806.t1	MTR_4g077210	27.059	170	112	4	3	161	72	240	5.05e-11	60.1
MS.gene88806.t1	MTR_7g075540	26.471	170	113	3	1	161	69	235	5.09e-11	60.1
MS.gene88806.t1	MTR_6g008530	28.723	94	67	0	1	94	78	171	5.52e-11	60.1
MS.gene88806.t1	MTR_4g088415	31.915	94	60	1	2	95	82	171	6.90e-11	59.7
MS.gene88806.t1	MTR_6g008600	23.034	178	119	3	1	160	77	254	7.42e-11	59.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene88806.t1	AT3G48320	36.478	159	99	1	1	159	67	223	1.05e-31	118
MS.gene88806.t1	AT2G30770	35.185	162	102	1	1	159	68	229	7.32e-29	110
MS.gene88806.t1	AT3G48310	33.962	159	103	1	1	159	67	223	1.10e-27	107
MS.gene88806.t1	AT1G11610	34.568	162	103	1	1	159	68	229	4.55e-27	105
MS.gene88806.t1	AT1G11610	34.568	162	103	1	1	159	68	229	4.75e-27	105
MS.gene88806.t1	AT3G48280	32.704	159	105	1	1	159	65	221	7.68e-27	105
MS.gene88806.t1	AT5G24950	31.481	162	108	1	1	159	67	228	2.57e-26	103
MS.gene88806.t1	AT4G13310	32.927	164	105	2	1	159	67	230	3.30e-26	102
MS.gene88806.t1	AT3G48270	32.704	159	105	1	1	159	66	222	5.24e-26	102
MS.gene88806.t1	AT5G42590	33.951	162	101	2	1	156	67	228	7.41e-26	102
MS.gene88806.t1	AT4G13310	32.927	164	105	2	1	159	67	230	8.77e-26	102
MS.gene88806.t1	AT2G30750	37.037	162	99	1	1	159	68	229	2.30e-25	101
MS.gene88806.t1	AT5G07990	33.735	166	104	3	1	161	68	232	2.57e-25	100
MS.gene88806.t1	AT3G48290	30.818	159	108	1	1	159	68	224	1.11e-24	99.4
MS.gene88806.t1	AT3G48290	30.818	159	108	1	1	159	68	224	1.33e-24	99.0
MS.gene88806.t1	AT3G48300	31.447	159	107	1	1	159	64	220	2.55e-24	98.2
MS.gene88806.t1	AT3G48300	31.447	159	107	1	1	159	66	222	2.57e-24	98.2
MS.gene88806.t1	AT3G26310	31.481	162	103	2	1	156	65	224	3.97e-24	97.8
MS.gene88806.t1	AT4G36220	32.298	161	103	4	3	161	77	233	9.36e-24	96.7
MS.gene88806.t1	AT5G24960	34.568	162	103	2	1	159	68	229	9.53e-24	95.9
MS.gene88806.t1	AT4G13290	31.707	164	107	2	1	159	68	231	1.80e-23	95.9
MS.gene88806.t1	AT3G26330	32.099	162	102	2	1	156	66	225	1.90e-23	95.9
MS.gene88806.t1	AT5G24960	34.568	162	103	2	1	159	68	229	1.90e-23	95.9
MS.gene88806.t1	AT1G13110	34.783	161	100	2	1	156	67	227	2.88e-23	95.1
MS.gene88806.t1	AT5G57260	30.000	160	108	1	1	156	65	224	3.35e-23	95.1
MS.gene88806.t1	AT3G26320	31.447	159	101	2	1	153	66	222	7.46e-23	94.0
MS.gene88806.t1	AT3G26190	31.646	158	103	2	1	153	63	220	1.12e-22	93.6
MS.gene88806.t1	AT1G13080	38.650	163	93	2	3	158	68	230	2.25e-22	92.8
MS.gene88806.t1	AT5G35715	32.927	164	101	3	1	155	1	164	3.30e-22	92.0
MS.gene88806.t1	AT3G26290	30.864	162	104	2	1	156	66	225	5.68e-22	91.7
MS.gene88806.t1	AT3G26300	31.481	162	103	2	1	156	66	225	5.68e-22	91.7
MS.gene88806.t1	AT3G26290	30.864	162	104	2	1	156	79	238	6.14e-22	91.7
MS.gene88806.t1	AT3G26210	39.200	125	76	0	1	125	66	190	6.86e-22	91.3
MS.gene88806.t1	AT4G20240	31.481	162	108	1	1	159	68	229	1.21e-21	90.1
MS.gene88806.t1	AT3G53280	33.333	162	101	3	1	155	63	224	1.85e-21	90.1
MS.gene88806.t1	AT4G20240	31.481	162	108	1	1	159	68	229	2.03e-21	89.7
MS.gene88806.t1	AT4G13770	28.221	163	113	1	1	159	66	228	3.59e-21	89.4
MS.gene88806.t1	AT3G26150	32.298	161	104	1	1	156	65	225	4.03e-21	89.4
MS.gene88806.t1	AT3G26280	32.919	161	102	2	1	156	67	226	4.29e-21	89.0
MS.gene88806.t1	AT3G26280	32.919	161	102	2	1	156	84	243	4.55e-21	89.0
MS.gene88806.t1	AT3G53305	30.488	164	105	3	1	155	1	164	9.62e-21	87.0
MS.gene88806.t1	AT3G26170	32.298	161	104	1	1	156	65	225	1.42e-20	87.8
MS.gene88806.t1	AT4G20235	32.653	147	78	2	13	159	82	207	1.45e-20	86.7
MS.gene88806.t1	AT3G26180	32.298	161	104	1	1	156	65	225	1.79e-20	87.4
MS.gene88806.t1	AT3G44250	34.356	163	95	5	3	155	65	225	1.85e-20	87.4
MS.gene88806.t1	AT3G26200	33.544	158	100	2	1	153	63	220	1.91e-20	87.4
MS.gene88806.t1	AT1G13100	33.974	156	98	2	3	153	62	217	2.30e-20	87.0
MS.gene88806.t1	AT4G31500	29.012	162	111	2	2	159	66	227	4.86e-20	86.3
MS.gene88806.t1	AT3G26160	34.783	161	100	2	1	156	65	225	5.34e-20	85.9
MS.gene88806.t1	AT1G13090	32.911	158	101	2	3	155	65	222	5.90e-20	84.3
MS.gene88806.t1	AT3G26270	32.927	164	104	2	1	158	67	230	1.48e-19	84.7
MS.gene88806.t1	AT1G13090	35.878	131	82	1	3	131	65	195	2.13e-19	84.3
MS.gene88806.t1	AT2G40890	25.444	169	110	3	1	155	62	228	4.22e-19	83.6
MS.gene88806.t1	AT5G25130	31.250	160	105	2	1	156	64	222	1.36e-18	82.0
MS.gene88806.t1	AT4G12330	30.952	168	107	2	3	161	83	250	2.54e-18	81.3
MS.gene88806.t1	AT5G06900	27.811	169	112	2	1	161	69	235	3.14e-18	80.9
MS.gene88806.t1	AT3G53300	28.659	164	108	3	1	155	63	226	4.53e-18	80.5
MS.gene88806.t1	AT5G44620	30.303	165	109	1	3	161	83	247	1.88e-17	79.0
MS.gene88806.t1	AT2G05180	32.653	147	95	1	1	143	77	223	2.69e-17	78.2
MS.gene88806.t1	AT3G20940	33.333	147	94	1	1	143	78	224	6.18e-17	77.4
MS.gene88806.t1	AT4G22710	28.571	168	112	2	1	161	89	255	8.04e-17	77.0
MS.gene88806.t1	AT4G22690	28.571	168	112	2	1	161	120	286	8.57e-17	77.0
MS.gene88806.t1	AT3G20950	33.333	147	94	1	1	143	82	228	8.68e-17	77.0
MS.gene88806.t1	AT5G25120	28.125	160	110	2	1	156	64	222	2.26e-16	75.5
MS.gene88806.t1	AT4G37410	27.879	165	110	3	3	158	68	232	3.18e-16	75.1
MS.gene88806.t1	AT3G32047	31.250	144	95	1	3	142	80	223	3.50e-16	75.1
MS.gene88806.t1	AT4G12300	28.485	165	112	2	3	161	79	243	4.90e-16	74.7
MS.gene88806.t1	AT1G01280	27.108	166	112	1	3	159	69	234	6.72e-16	74.3
MS.gene88806.t1	AT5G04330	28.743	167	110	4	1	161	67	230	1.06e-15	73.6
MS.gene88806.t1	AT4G15350	31.293	147	97	1	1	143	71	217	1.11e-15	73.6
MS.gene88806.t1	AT4G31970	27.119	177	113	3	1	161	70	246	1.23e-15	73.6
MS.gene88806.t1	AT4G15360	31.724	145	95	1	3	143	78	222	1.28e-15	73.6
MS.gene88806.t1	AT4G12320	29.091	165	111	2	3	161	79	243	1.82e-15	73.2
MS.gene88806.t1	AT5G25140	28.931	159	108	2	3	157	66	223	1.87e-15	73.2
MS.gene88806.t1	AT3G20130	30.822	146	97	1	1	142	78	223	2.27e-15	72.8
MS.gene88806.t1	AT4G37320	27.485	171	112	4	3	161	71	241	2.31e-15	72.8
MS.gene88806.t1	AT3G26220	33.607	122	81	0	3	124	66	187	2.89e-15	72.4
MS.gene88806.t1	AT3G20110	29.747	158	107	1	1	154	75	232	5.24e-15	71.6
MS.gene88806.t1	AT3G53290	29.530	149	96	3	16	155	8	156	6.36e-15	71.2
MS.gene88806.t1	AT4G37330	28.916	166	109	4	3	159	71	236	7.54e-15	71.2
MS.gene88806.t1	AT4G37340	26.506	166	109	3	1	155	68	231	7.88e-15	71.2
MS.gene88806.t1	AT2G24180	29.375	160	109	1	1	156	71	230	8.36e-15	71.2
MS.gene88806.t1	AT4G31940	25.843	178	115	2	1	161	70	247	8.71e-15	71.2
MS.gene88806.t1	AT3G25180	25.455	165	117	1	1	159	76	240	8.76e-15	70.9
MS.gene88806.t1	AT3G25180	25.455	165	117	1	1	159	76	240	1.10e-14	70.9
MS.gene88806.t1	AT2G23220	28.402	169	109	4	3	159	86	254	1.80e-14	70.1
MS.gene88806.t1	AT2G14100	28.682	129	92	0	1	129	79	207	1.86e-14	70.1
MS.gene88806.t1	AT3G20140	29.932	147	99	1	1	143	78	224	2.20e-14	70.1
MS.gene88806.t1	AT5G36220	27.976	168	111	3	1	158	74	241	2.87e-14	69.7
MS.gene88806.t1	AT4G15330	29.600	125	88	0	1	125	74	198	3.06e-14	69.7
MS.gene88806.t1	AT5G06905	26.590	173	105	5	1	160	66	229	3.55e-14	69.3
MS.gene88806.t1	AT3G20100	30.263	152	102	1	1	148	77	228	8.08e-14	68.2
MS.gene88806.t1	AT5G57220	27.711	166	110	3	2	158	66	230	8.38e-14	68.2
MS.gene88806.t1	AT5G25180	28.125	160	110	2	1	156	64	222	8.41e-14	68.2
MS.gene88806.t1	AT4G12310	28.485	165	112	2	3	161	81	245	8.84e-14	68.2
MS.gene88806.t1	AT3G20960	29.252	147	100	1	1	143	77	223	1.05e-13	68.2
MS.gene88806.t1	AT5G09970	30.120	166	103	7	1	158	107	267	1.36e-13	67.8
MS.gene88806.t1	AT5G67310	24.699	166	117	4	3	161	80	244	1.46e-13	67.4
MS.gene88806.t1	AT3G20090	28.682	129	92	0	1	129	79	207	1.48e-13	67.4
MS.gene88806.t1	AT2G23190	27.485	171	112	4	1	159	113	283	2.00e-13	67.0
MS.gene88806.t1	AT4G37400	25.904	166	112	3	2	158	67	230	2.19e-13	67.0
MS.gene88806.t1	AT2G27000	28.244	131	90	2	1	129	75	203	3.92e-13	66.2
MS.gene88806.t1	AT2G02580	29.299	157	107	1	1	153	66	222	4.12e-13	66.2
MS.gene88806.t1	AT1G74550	26.415	159	110	4	1	155	62	217	4.21e-13	66.2
MS.gene88806.t1	AT4G37360	24.699	166	112	3	1	155	68	231	4.36e-13	66.2
MS.gene88806.t1	AT3G20080	27.907	129	93	0	1	129	78	206	4.46e-13	66.2
MS.gene88806.t1	AT3G20080	27.907	129	93	0	1	129	78	206	4.46e-13	66.2
MS.gene88806.t1	AT3G20120	29.457	129	91	0	1	129	77	205	5.03e-13	65.9
MS.gene88806.t1	AT3G61880	27.976	168	110	4	1	161	104	267	6.08e-13	65.9
MS.gene88806.t1	AT3G61880	27.976	168	110	4	1	161	104	267	6.21e-13	65.9
MS.gene88806.t1	AT5G47990	27.891	147	102	1	1	143	78	224	8.69e-13	65.5
MS.gene88806.t1	AT2G42250	27.879	165	113	2	1	160	76	239	1.59e-12	64.7
MS.gene88806.t1	AT1G50520	28.244	131	92	1	1	129	79	209	2.94e-12	63.9
MS.gene88806.t1	AT3G26830	30.147	136	93	1	3	136	65	200	3.81e-12	63.5
MS.gene88806.t1	AT5G10610	25.153	163	113	3	3	156	70	232	4.30e-12	63.2
MS.gene88806.t1	AT1G58260	25.568	176	107	5	4	160	78	248	5.18e-12	63.2
MS.gene88806.t1	AT5G10600	34.409	93	61	0	3	95	84	176	7.64e-12	62.8
MS.gene88806.t1	AT4G37310	26.036	169	114	3	2	159	68	236	8.25e-12	62.4
MS.gene88806.t1	AT2G46660	27.879	165	110	5	1	161	108	267	1.15e-11	62.0
MS.gene88806.t1	AT4G37430	25.581	172	113	3	2	158	64	235	1.23e-11	62.0
MS.gene88806.t1	AT3G26230	31.967	122	83	0	3	124	63	184	1.65e-11	61.6
MS.gene88806.t1	AT1G74540	25.000	164	111	3	1	155	62	222	1.74e-11	61.6
MS.gene88806.t1	AT2G25160	27.485	171	108	4	4	159	74	243	4.95e-11	60.1
MS.gene88806.t1	AT2G25160	27.485	171	108	4	4	159	74	243	6.98e-11	59.7

Find 30 sgRNAs with CRISPR-Local

Find 31 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTTCTGAGTATGGTCCTTAT+TGG	0.239224	5.4:+55474210	MS.gene88806:CDS
GCTAGGAGCATTTGATATTC+AGG	0.249787	5.4:+55474520	MS.gene88806:CDS
AAAGCAAGAGTTGGATGTTT+TGG	0.267848	5.4:+55474304	MS.gene88806:CDS
AGCTCAGATCCTTGAGTCTT+TGG	0.286174	5.4:-55474158	None:intergenic
TCCAACTCTTGCTTTCTAAT+AGG	0.315063	5.4:-55474296	None:intergenic
GAAGATGAAATGATAATAGT+TGG	0.344929	5.4:-55474083	None:intergenic
TTTCTGACGCTATGCCAATA+AGG	0.356351	5.4:-55474224	None:intergenic
ATCTTTGATGAAAGCTGCTT+TGG	0.368782	5.4:+55474331	MS.gene88806:CDS
ATCTTGTTGATTATGTTCCT+TGG	0.383278	5.4:+55474498	MS.gene88806:CDS
GATTCAAAAGTTGAGATGTT+TGG	0.407372	5.4:+55474272	MS.gene88806:CDS
GTTGATTATGTTCCTTGGCT+AGG	0.426814	5.4:+55474503	MS.gene88806:CDS
TGGAACTTGACCAAGTTGTA+AGG	0.454316	5.4:-55474063	None:intergenic
GCAATTTGACTTGAAGAAGT+TGG	0.470536	5.4:+55474442	MS.gene88806:CDS
CCAATCATGTCCTTACAACT+TGG	0.481699	5.4:+55474053	None:intergenic
CAAGAAGGAGTGGCTTTGAC+CGG	0.501076	5.4:+55474467	MS.gene88806:CDS
ATCAACAAGATTAAAAGCTC+CGG	0.503671	5.4:-55474486	None:intergenic
GGATCTGAGCTCATGTCAAA+TGG	0.507441	5.4:+55474170	MS.gene88806:CDS
TTGAAGAAGTTGGTTCAAGA+AGG	0.515737	5.4:+55474452	MS.gene88806:CDS
CTCATGTCAAATGGTGCCAA+AGG	0.516327	5.4:+55474179	MS.gene88806:CDS
TCCTATTAGAAAGCAAGAGT+TGG	0.542429	5.4:+55474295	MS.gene88806:CDS
GTCAAATGGTGCCAAAGGGT+TGG	0.569020	5.4:+55474184	MS.gene88806:CDS
TGTATAAGATGATACTCGGT+CGG	0.582929	5.4:+55474408	MS.gene88806:CDS
TCATGTCAAATGGTGCCAAA+GGG	0.588821	5.4:+55474180	MS.gene88806:CDS
GGCTGTACAGAATCTTATAG+AGG	0.592984	5.4:+55474379	MS.gene88806:CDS
GCAAGTCGACCAAAGACTCA+AGG	0.598156	5.4:+55474149	MS.gene88806:CDS
ATATCAAATGCTCCTAGCCA+AGG	0.600570	5.4:-55474515	None:intergenic
GAAGTTGGTTCAAGAAGGAG+TGG	0.602882	5.4:+55474457	MS.gene88806:CDS
TTGATGAAAGCTGCTTTGGT+AGG	0.608318	5.4:+55474335	MS.gene88806:CDS
TGAGATTGTGAATGTTAGTG+AGG	0.622510	5.4:+55474358	MS.gene88806:CDS
AATGTGTATAAGATGATACT+CGG	0.650024	5.4:+55474404	MS.gene88806:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	AATGTGTATAAGATGATACT+CGG	+	chr5.4:55474404-55474423	MS.gene88806:CDS	25.0%
!	GAAGATGAAATGATAATAGT+TGG	-	chr5.4:55474086-55474105	None:intergenic	25.0%
	ATCAACAAGATTAAAAGCTC+CGG	-	chr5.4:55474489-55474508	None:intergenic	30.0%
	GATTCAAAAGTTGAGATGTT+TGG	+	chr5.4:55474272-55474291	MS.gene88806:CDS	30.0%
!	AATTGATGTCATGAGTTTTG+AGG	-	chr5.4:55474127-55474146	None:intergenic	30.0%
!	ATCTTGTTGATTATGTTCCT+TGG	+	chr5.4:55474498-55474517	MS.gene88806:CDS	30.0%
	ATCTTTGATGAAAGCTGCTT+TGG	+	chr5.4:55474331-55474350	MS.gene88806:CDS	35.0%
	TCCAACTCTTGCTTTCTAAT+AGG	-	chr5.4:55474299-55474318	None:intergenic	35.0%
	TCCTATTAGAAAGCAAGAGT+TGG	+	chr5.4:55474295-55474314	MS.gene88806:CDS	35.0%
	TGAGATTGTGAATGTTAGTG+AGG	+	chr5.4:55474358-55474377	MS.gene88806:CDS	35.0%
	TGTATAAGATGATACTCGGT+CGG	+	chr5.4:55474408-55474427	MS.gene88806:CDS	35.0%
	TTTCTGAGTATGGTCCTTAT+TGG	+	chr5.4:55474210-55474229	MS.gene88806:CDS	35.0%
!	AAAGCAAGAGTTGGATGTTT+TGG	+	chr5.4:55474304-55474323	MS.gene88806:CDS	35.0%
!	TTGAAGAAGTTGGTTCAAGA+AGG	+	chr5.4:55474452-55474471	MS.gene88806:CDS	35.0%
!!	GCAATTTGACTTGAAGAAGT+TGG	+	chr5.4:55474442-55474461	MS.gene88806:CDS	35.0%
	ATATCAAATGCTCCTAGCCA+AGG	-	chr5.4:55474518-55474537	None:intergenic	40.0%
	GGCTGTACAGAATCTTATAG+AGG	+	chr5.4:55474379-55474398	MS.gene88806:CDS	40.0%
	GTTGATTATGTTCCTTGGCT+AGG	+	chr5.4:55474503-55474522	MS.gene88806:CDS	40.0%
	TGGAACTTGACCAAGTTGTA+AGG	-	chr5.4:55474066-55474085	None:intergenic	40.0%
	TTTCTGACGCTATGCCAATA+AGG	-	chr5.4:55474227-55474246	None:intergenic	40.0%
!	TCATGTCAAATGGTGCCAAA+GGG	+	chr5.4:55474180-55474199	MS.gene88806:CDS	40.0%
!	TTGATGAAAGCTGCTTTGGT+AGG	+	chr5.4:55474335-55474354	MS.gene88806:CDS	40.0%
	AGCTCAGATCCTTGAGTCTT+TGG	-	chr5.4:55474161-55474180	None:intergenic	45.0%
	CTCAGAAAAAGCCAACCCTT+TGG	-	chr5.4:55474198-55474217	None:intergenic	45.0%
	GGATCTGAGCTCATGTCAAA+TGG	+	chr5.4:55474170-55474189	MS.gene88806:CDS	45.0%
!	CTCATGTCAAATGGTGCCAA+AGG	+	chr5.4:55474179-55474198	MS.gene88806:CDS	45.0%
!	GAAGTTGGTTCAAGAAGGAG+TGG	+	chr5.4:55474457-55474476	MS.gene88806:CDS	45.0%
!!!	GGGTTGGCTTTTTCTGAGTA+TGG	+	chr5.4:55474200-55474219	MS.gene88806:CDS	45.0%
	GCAAGTCGACCAAAGACTCA+AGG	+	chr5.4:55474149-55474168	MS.gene88806:CDS	50.0%
!	GTCAAATGGTGCCAAAGGGT+TGG	+	chr5.4:55474184-55474203	MS.gene88806:CDS	50.0%
!!	CAAGAAGGAGTGGCTTTGAC+CGG	+	chr5.4:55474467-55474486	MS.gene88806:CDS	50.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.4	gene	55474059	55474541	55474059	ID=MS.gene88806
chr5.4	mRNA	55474059	55474541	55474059	ID=MS.gene88806.t1;Parent=MS.gene88806
chr5.4	exon	55474059	55474541	55474059	ID=MS.gene88806.t1.exon1;Parent=MS.gene88806.t1
chr5.4	CDS	55474059	55474541	55474059	ID=cds.MS.gene88806.t1;Parent=MS.gene88806.t1

Gene Sequence

>MS.gene88806

ATGTCCTTACAACTTGGTCAAGTTCCAACTATTATCATTTCATCTTCAAAAGTTGCAGAATCATTCCTCAAAACTCATGACATCAATTTTGCAAGTCGACCAAAGACTCAAGGATCTGAGCTCATGTCAAATGGTGCCAAAGGGTTGGCTTTTTCTGAGTATGGTCCTTATTGGCATAGCGTCAGAAAACTTTGCACTTTAAAACTTCTTAATGATTCAAAAGTTGAGATGTTTGGTCCTATTAGAAAGCAAGAGTTGGATGTTTTGGTTAAATCTTTGATGAAAGCTGCTTTGGTAGGTGAGATTGTGAATGTTAGTGAGGCTGTACAGAATCTTATAGAGGAAAATGTGTATAAGATGATACTCGGTCGGAGTAAGTGTGAGCAATTTGACTTGAAGAAGTTGGTTCAAGAAGGAGTGGCTTTGACCGGAGCTTTTAATCTTGTTGATTATGTTCCTTGGCTAGGAGCATTTGATATTCAG

Protein sequence

>MS.gene88806.t1

MSLQLGQVPTIIISSSKVAESFLKTHDINFASRPKTQGSELMSNGAKGLAFSEYGPYWHSVRKLCTLKLLNDSKVEMFGPIRKQELDVLVKSLMKAALVGEIVNVSEAVQNLIEENVYKMILGRSKCEQFDLKKLVQEGVALTGAFNLVDYVPWLGAFDIQ