Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89362.t1 | XP_003621040.2 | 96.1 | 1105 | 40 | 2 | 1 | 1105 | 1 | 1102 | 0.00E+00 | 2173.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89362.t1 | F4I116 | 66.4 | 1095 | 350 | 7 | 11 | 1104 | 6 | 1083 | 0.0e+00 | 1523.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89362.t1 | A2Q4Y9 | 96.1 | 1105 | 40 | 2 | 1 | 1105 | 1 | 1102 | 0.0e+00 | 2173.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene89362 | MS.gene68406 | PPI |
MS.gene89362 | MS.gene031761 | PPI |
MS.gene89362 | MS.gene052373 | PPI |
MS.gene89362 | MS.gene030099 | PPI |
MS.gene89362 | MS.gene037771 | PPI |
MS.gene89362 | MS.gene26848 | PPI |
MS.gene89362 | MS.gene80766 | PPI |
MS.gene89362 | MS.gene065875 | PPI |
MS.gene89362 | MS.gene061256 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89362.t1 | MTR_7g006450 | 96.109 | 1105 | 40 | 2 | 1 | 1105 | 1 | 1102 | 0.0 | 2217 |
MS.gene89362.t1 | MTR_3g058530 | 77.893 | 579 | 116 | 5 | 526 | 1103 | 1 | 568 | 0.0 | 938 |
MS.gene89362.t1 | MTR_3g058540 | 81.323 | 514 | 88 | 2 | 6 | 513 | 2 | 513 | 0.0 | 879 |
MS.gene89362.t1 | MTR_7g006440 | 49.485 | 97 | 31 | 1 | 48 | 144 | 12 | 90 | 2.20e-22 | 92.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene89362.t1 | AT1G09620 | 67.215 | 1095 | 341 | 7 | 11 | 1104 | 6 | 1083 | 0.0 | 1557 |
Find 0 sgRNAs with CRISPR-Local
Find 340 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTATATTGGTAATTTTTAA+AGG | + | 50643:37861-37880 | None:intergenic | 10.0% |
!!! | ATTTTTTTAAATACCAAAAA+AGG | + | 50643:38337-38356 | None:intergenic | 10.0% |
!! | AAATTGAACAATATTTGATT+AGG | + | 50643:38185-38204 | None:intergenic | 15.0% |
!! | AGTAATGAAAATTAAAGTAA+AGG | + | 50643:38565-38584 | None:intergenic | 15.0% |
!! | ATAAATTGAATAGCAAAAAT+TGG | + | 50643:37989-38008 | None:intergenic | 15.0% |
!! | TTCAATTTATAAGGAATTAT+AGG | - | 50643:37999-38018 | MS.gene89362:CDS | 15.0% |
!!! | TTTTTGCTATTCAATTTATA+AGG | - | 50643:37990-38009 | MS.gene89362:CDS | 15.0% |
!! | AAAAGATTACAATCAAGAAT+TGG | - | 50643:39657-39676 | MS.gene89362:CDS | 20.0% |
!! | AATGAAAATTAAAGTAAAGG+AGG | + | 50643:38562-38581 | None:intergenic | 20.0% |
!! | ACACTAAAACATTTACAAAA+AGG | + | 50643:37833-37852 | None:intergenic | 20.0% |
!! | TAACGAAAGAATCAAAATAA+GGG | + | 50643:36940-36959 | None:intergenic | 20.0% |
!!! | ATTATTTATTTCTCATTTCC+AGG | - | 50643:38588-38607 | MS.gene89362:intron | 20.0% |
!!! | CTTTCAATTTTGATGAATAA+AGG | - | 50643:37436-37455 | MS.gene89362:CDS | 20.0% |
!!! | TTCAATTTGTATTTCTACAT+AGG | + | 50643:38116-38135 | None:intergenic | 20.0% |
! | AAATAAGTAAGCCACTTATA+AGG | + | 50643:36836-36855 | None:intergenic | 25.0% |
! | AAATGAGAAATAAATTGACC+TGG | + | 50643:38609-38628 | None:intergenic | 25.0% |
! | AAGGATATAACATACTTGAA+AGG | - | 50643:37694-37713 | MS.gene89362:CDS | 25.0% |
! | AGAGTATACGATTATTAAGA+TGG | - | 50643:37090-37109 | MS.gene89362:CDS | 25.0% |
! | ATAATAGGCACAATATCAAA+TGG | + | 50643:37580-37599 | None:intergenic | 25.0% |
! | ATCATTGTTGGAGAATTTAA+AGG | - | 50643:37733-37752 | MS.gene89362:CDS | 25.0% |
! | CAAAGAATTCATTAACTTTG+AGG | - | 50643:37889-37908 | MS.gene89362:CDS | 25.0% |
! | CTAACGAAAGAATCAAAATA+AGG | + | 50643:36941-36960 | None:intergenic | 25.0% |
! | CTCAGATAAAAAAACTATAC+AGG | + | 50643:37965-37984 | None:intergenic | 25.0% |
! | CTCTTAGTAATAAGTACAAA+GGG | - | 50643:36708-36727 | MS.gene89362:CDS | 25.0% |
! | TAAGAAATAAAGTGATGTTG+TGG | - | 50643:38370-38389 | MS.gene89362:intron | 25.0% |
! | TATGATAATTTGACCTTTGT+AGG | - | 50643:37931-37950 | MS.gene89362:CDS | 25.0% |
! | TCAAAGAAAGCAAATAAACA+AGG | - | 50643:39901-39920 | MS.gene89362:CDS | 25.0% |
! | TCATTGTTGGAGAATTTAAA+GGG | - | 50643:37734-37753 | MS.gene89362:CDS | 25.0% |
! | TCTCTTAGTAATAAGTACAA+AGG | - | 50643:36707-36726 | MS.gene89362:CDS | 25.0% |
! | TGAGTATAGATTGACATATA+AGG | - | 50643:39615-39634 | MS.gene89362:CDS | 25.0% |
! | TTAATAATCGTATACTCTTG+AGG | + | 50643:37088-37107 | None:intergenic | 25.0% |
! | TTATTTGAGAAGAAAATTCC+AGG | - | 50643:39877-39896 | MS.gene89362:CDS | 25.0% |
! | TTGTAAAAATGTTACTGATG+TGG | - | 50643:38205-38224 | MS.gene89362:intron | 25.0% |
! | TTGTACTTATTACTAAGAGA+CGG | + | 50643:36707-36726 | None:intergenic | 25.0% |
! | TTTGTAAATGAACAGTTTGA+TGG | - | 50643:39970-39989 | MS.gene89362:CDS | 25.0% |
!! | ATAAAGCTTATATTTTGCAG+TGG | - | 50643:38154-38173 | MS.gene89362:intron | 25.0% |
!! | ATTTGAAATCAATGAAACTG+AGG | - | 50643:37249-37268 | MS.gene89362:CDS | 25.0% |
!! | TAGAATCTAAGGTTCAAAAA+TGG | - | 50643:36336-36355 | MS.gene89362:CDS | 25.0% |
!! | TCAATTTATTTCTCATTTCC+AGG | - | 50643:38611-38630 | MS.gene89362:intron | 25.0% |
!! | TTCATCAAAATTGAAAGCAT+AGG | + | 50643:37433-37452 | None:intergenic | 25.0% |
!! | TTTCAAGTATGTTATATCCT+TGG | + | 50643:37695-37714 | None:intergenic | 25.0% |
!!! | AACTATAATAGCTCCTTTTT+TGG | - | 50643:38321-38340 | MS.gene89362:intron | 25.0% |
!!! | ATTTTGATGAATAAAGGTAC+TGG | - | 50643:37442-37461 | MS.gene89362:CDS | 25.0% |
!!! | CTTATTTTGATTCTTTCGTT+AGG | - | 50643:36939-36958 | MS.gene89362:CDS | 25.0% |
!!! | CTTTGAAACTTGCATTATAT+TGG | + | 50643:37874-37893 | None:intergenic | 25.0% |
!!! | TTTTGATGAATAAAGGTACT+GGG | - | 50643:37443-37462 | MS.gene89362:CDS | 25.0% |
AAAAGCTTTCTCCTAATCAA+TGG | + | 50643:37781-37800 | None:intergenic | 30.0% | |
AAGTAGTTTAATCTGCACAT+CGG | + | 50643:38460-38479 | None:intergenic | 30.0% | |
AATGAGGAAATTGAAGTCAT+TGG | - | 50643:36967-36986 | MS.gene89362:CDS | 30.0% | |
AGAAGAAAGATGAACAATAC+TGG | + | 50643:38537-38556 | None:intergenic | 30.0% | |
AGAGTCCTGCAAATATTTAT+TGG | + | 50643:39836-39855 | None:intergenic | 30.0% | |
AGTGTAATAAGCCATGTAAA+TGG | + | 50643:38924-38943 | None:intergenic | 30.0% | |
ATGAGGAAATTGAAGTCATT+GGG | - | 50643:36968-36987 | MS.gene89362:CDS | 30.0% | |
ATTACAATCAAGAATTGGTG+TGG | - | 50643:39662-39681 | MS.gene89362:CDS | 30.0% | |
CAAATAAACTCTGCATAATG+TGG | + | 50643:39730-39749 | None:intergenic | 30.0% | |
CACATTATGCAGAGTTTATT+TGG | - | 50643:39728-39747 | MS.gene89362:CDS | 30.0% | |
GAAGAAGAAACCAGAATTTA+GGG | - | 50643:37522-37541 | MS.gene89362:CDS | 30.0% | |
GAGTTAAAAAGATGACAGTT+GGG | + | 50643:40389-40408 | None:intergenic | 30.0% | |
GATCAGTGGTATATAACATA+TGG | - | 50643:38710-38729 | MS.gene89362:intron | 30.0% | |
GCTAGAGAAATTCAACAATT+CGG | - | 50643:36599-36618 | MS.gene89362:CDS | 30.0% | |
GTGTTAATACAGTTCTTCAT+AGG | - | 50643:38088-38107 | MS.gene89362:intron | 30.0% | |
TAACATATGGAGAATCAGAA+TGG | - | 50643:38723-38742 | MS.gene89362:intron | 30.0% | |
TACGATTATTAAGATGGAGT+TGG | - | 50643:37096-37115 | MS.gene89362:CDS | 30.0% | |
TCCAACAATGATTATTCCTT+GGG | + | 50643:37725-37744 | None:intergenic | 30.0% | |
TGAAGAAGAAACCAGAATTT+AGG | - | 50643:37521-37540 | MS.gene89362:CDS | 30.0% | |
TGAAGAGATTTCAAAGTTTC+AGG | - | 50643:36808-36827 | MS.gene89362:CDS | 30.0% | |
TGAGTTAAAAAGATGACAGT+TGG | + | 50643:40390-40409 | None:intergenic | 30.0% | |
TGTAAATGCAGAAAGTAAGA+TGG | + | 50643:39165-39184 | None:intergenic | 30.0% | |
TTCTTCTTAGACTTCAAGAA+AGG | + | 50643:40144-40163 | None:intergenic | 30.0% | |
TTTCTTCTTCAAATGCTTCA+GGG | + | 50643:37512-37531 | None:intergenic | 30.0% | |
! | AATCTAAGGTTCAAAAATGG+TGG | - | 50643:36339-36358 | MS.gene89362:CDS | 30.0% |
! | ATCTAAGGTTCAAAAATGGT+GGG | - | 50643:36340-36359 | MS.gene89362:CDS | 30.0% |
! | ATTGATTAGGAGAAAGCTTT+TGG | - | 50643:37780-37799 | MS.gene89362:CDS | 30.0% |
! | CAGCTTCATTCTTTCTAAAA+TGG | + | 50643:39083-39102 | None:intergenic | 30.0% |
! | TAAATGAACAGTTTGATGGT+TGG | - | 50643:39974-39993 | MS.gene89362:CDS | 30.0% |
! | TATCTCTGTTGAATTTGTTC+TGG | + | 50643:40023-40042 | None:intergenic | 30.0% |
!! | AATGGTTGATGAAATATCTG+TGG | + | 50643:39065-39084 | None:intergenic | 30.0% |
!! | ATTTGTTCTGGAGAATACTT+AGG | + | 50643:40011-40030 | None:intergenic | 30.0% |
!! | CATTTTAGAAAGAATGAAGC+TGG | - | 50643:39081-39100 | MS.gene89362:CDS | 30.0% |
!! | TGTTTTCGAGAAAGCAAATA+AGG | - | 50643:39381-39400 | MS.gene89362:CDS | 30.0% |
!! | TTTGATGAATAAAGGTACTG+GGG | - | 50643:37444-37463 | MS.gene89362:CDS | 30.0% |
!!! | ATCCTGAATTTTTTCATACC+AGG | + | 50643:39434-39453 | None:intergenic | 30.0% |
!!! | ATTTTGATTCTTTCGTTAGG+TGG | - | 50643:36942-36961 | MS.gene89362:CDS | 30.0% |
!!! | GTATACAATTTTTTCGCCTT+TGG | - | 50643:37012-37031 | MS.gene89362:CDS | 30.0% |
!!! | TGGGATTATATTTTTTGCAG+TGG | - | 50643:39025-39044 | MS.gene89362:CDS | 30.0% |
AAAATGCATGCCCTAAATGA+AGG | + | 50643:36463-36482 | None:intergenic | 35.0% | |
AAAGTGATGTTGTGGTAAGA+TGG | - | 50643:38378-38397 | MS.gene89362:intron | 35.0% | |
AAATGGCAATCTCAAATCCA+GGG | + | 50643:40199-40218 | None:intergenic | 35.0% | |
AACCATTCGTGTAAGGAAAA+GGG | + | 50643:36439-36458 | None:intergenic | 35.0% | |
AACTCCGGAACTTCAATAAT+AGG | + | 50643:37595-37614 | None:intergenic | 35.0% | |
AATCAGATAAGGACTCAACT+AGG | + | 50643:38898-38917 | None:intergenic | 35.0% | |
ACAGGATTCTAATCCTACAA+AGG | + | 50643:37947-37966 | None:intergenic | 35.0% | |
ACGAATGGTTACCTTCATTT+AGG | - | 50643:36449-36468 | MS.gene89362:CDS | 35.0% | |
AGAACCTCAATTTCACCAAA+TGG | + | 50643:40216-40235 | None:intergenic | 35.0% | |
AGTTTCAGGATCCTTATAAG+TGG | - | 50643:36822-36841 | MS.gene89362:CDS | 35.0% | |
ATAATCTCAGTTAACGCAAG+CGG | + | 50643:37400-37419 | None:intergenic | 35.0% | |
ATATCTGTGGACTTAGGAAA+AGG | + | 50643:39052-39071 | None:intergenic | 35.0% | |
ATCTGATTCCACCATTTACA+TGG | - | 50643:38910-38929 | MS.gene89362:CDS | 35.0% | |
ATTATTGAAGTTCCGGAGTT+TGG | - | 50643:37595-37614 | MS.gene89362:CDS | 35.0% | |
ATTTGCATTGGAATCATCGT+CGG | + | 50643:36684-36703 | None:intergenic | 35.0% | |
CATTTGGTATAGGTTGTGAT+TGG | - | 50643:36885-36904 | MS.gene89362:CDS | 35.0% | |
CGAATGGTTACCTTCATTTA+GGG | - | 50643:36450-36469 | MS.gene89362:CDS | 35.0% | |
CTCCAACAATGATTATTCCT+TGG | + | 50643:37726-37745 | None:intergenic | 35.0% | |
GACATATAAGGAGAACAATC+AGG | - | 50643:39627-39646 | MS.gene89362:CDS | 35.0% | |
GAGTGCCAATAAATATTTGC+AGG | - | 50643:39828-39847 | MS.gene89362:CDS | 35.0% | |
GATAGCGATGTTTATCTCAT+TGG | + | 50643:39512-39531 | None:intergenic | 35.0% | |
GATGAAATATCTGTGGACTT+AGG | + | 50643:39058-39077 | None:intergenic | 35.0% | |
GATTCGACCATACTTTAAGT+TGG | - | 50643:38807-38826 | MS.gene89362:intron | 35.0% | |
GATTCTTTACCCTCATGAAA+GGG | + | 50643:38031-38050 | None:intergenic | 35.0% | |
GCAAAATCTTCTATGAGAAC+CGG | - | 50643:39454-39473 | MS.gene89362:CDS | 35.0% | |
GCCTTAAACTTATCAGGAAA+AGG | + | 50643:37127-37146 | None:intergenic | 35.0% | |
GGAAGGTTGTTAAAGATGTT+AGG | - | 50643:36990-37009 | MS.gene89362:CDS | 35.0% | |
GGTTCAACCAACTTAAAGTA+TGG | + | 50643:38817-38836 | None:intergenic | 35.0% | |
GTAATAAGCCATGTAAATGG+TGG | + | 50643:38921-38940 | None:intergenic | 35.0% | |
GTATGGTCAAACAAATGCAT+GGG | - | 50643:37201-37220 | MS.gene89362:CDS | 35.0% | |
GTTTCTTCTTCAAATGCTTC+AGG | + | 50643:37513-37532 | None:intergenic | 35.0% | |
TAACCATTCGTGTAAGGAAA+AGG | + | 50643:36440-36459 | None:intergenic | 35.0% | |
TAGATTCTATCTCACGAAGA+CGG | + | 50643:36325-36344 | None:intergenic | 35.0% | |
TCAAGAGCCTTAAACTTATC+AGG | + | 50643:37133-37152 | None:intergenic | 35.0% | |
TCTTCGTGAGATAGAATCTA+AGG | - | 50643:36325-36344 | MS.gene89362:CDS | 35.0% | |
TCTTGGAACACAAATACCAT+GGG | - | 50643:38862-38881 | MS.gene89362:intron | 35.0% | |
TGAGGAAATTGAAGTCATTG+GGG | - | 50643:36969-36988 | MS.gene89362:CDS | 35.0% | |
TGATTCTTTACCCTCATGAA+AGG | + | 50643:38032-38051 | None:intergenic | 35.0% | |
TGCCTGGTATGAAAAAATTC+AGG | - | 50643:39429-39448 | MS.gene89362:CDS | 35.0% | |
TGTATGGTCAAACAAATGCA+TGG | - | 50643:37200-37219 | MS.gene89362:CDS | 35.0% | |
TGTGCCTATTATTGAAGTTC+CGG | - | 50643:37588-37607 | MS.gene89362:CDS | 35.0% | |
TGTTTGACCATACATAGTCT+CGG | + | 50643:37194-37213 | None:intergenic | 35.0% | |
TTATCAGCAGAAGCTTTCAT+CGG | + | 50643:36575-36594 | None:intergenic | 35.0% | |
TTATTTGCTTTCTTTGAGCC+TGG | + | 50643:39898-39917 | None:intergenic | 35.0% | |
TTGGTGAAATTGAGGTTCTT+GGG | - | 50643:40217-40236 | MS.gene89362:CDS | 35.0% | |
TTTACAACCACACTGCAATT+TGG | - | 50643:39179-39198 | MS.gene89362:CDS | 35.0% | |
TTTGGTGAAATTGAGGTTCT+TGG | - | 50643:40216-40235 | MS.gene89362:CDS | 35.0% | |
! | AATGCTCCATATTTTCCATC+AGG | + | 50643:37232-37251 | None:intergenic | 35.0% |
! | ATTGCCATTTGGTGAAATTG+AGG | - | 50643:40209-40228 | MS.gene89362:CDS | 35.0% |
! | CTTATCAATGGGAGATTTTG+AGG | - | 50643:36768-36787 | MS.gene89362:CDS | 35.0% |
! | GATAAGTTTAAGGCTCTTGA+AGG | - | 50643:37133-37152 | MS.gene89362:CDS | 35.0% |
! | GATCTTAAGGCATTTGGTAT+AGG | - | 50643:36875-36894 | MS.gene89362:CDS | 35.0% |
! | GATGTTTTCAAATCAGAACC+TGG | - | 50643:36371-36390 | MS.gene89362:CDS | 35.0% |
! | GCCTTTTCCTGATAAGTTTA+AGG | - | 50643:37123-37142 | MS.gene89362:CDS | 35.0% |
! | GTAAATGGTGGAATCAGATA+AGG | + | 50643:38909-38928 | None:intergenic | 35.0% |
! | GTTTTGCCTGATGGAAAATA+TGG | - | 50643:37223-37242 | MS.gene89362:CDS | 35.0% |
!! | AGAGAGATTTTGAAGAAGGA+GGG | - | 50643:39751-39770 | MS.gene89362:CDS | 35.0% |
!! | GCTTACTTATTTTCCACCTT+TGG | - | 50643:36844-36863 | MS.gene89362:CDS | 35.0% |
!! | TTGGAGAGAGATTTTGAAGA+AGG | - | 50643:39747-39766 | MS.gene89362:CDS | 35.0% |
!! | TTTAAGTTGGTTGAACCAGT+GGG | - | 50643:38820-38839 | MS.gene89362:intron | 35.0% |
!!! | ACAATTTTTTCGCCTTTGGA+TGG | - | 50643:37016-37035 | MS.gene89362:CDS | 35.0% |
AAACCGGGTGAAAAGTTCTT+TGG | - | 50643:36407-36426 | MS.gene89362:CDS | 40.0% | |
AAATCAAAATCCTCCATCCC+AGG | - | 50643:40359-40378 | MS.gene89362:CDS | 40.0% | |
AATCAAAATCCTCCATCCCA+GGG | - | 50643:40360-40379 | MS.gene89362:CDS | 40.0% | |
ACCGTAAAACCCACTAACAA+GGG | + | 50643:39578-39597 | None:intergenic | 40.0% | |
ACGAAGAGTCCTGAAATTTC+CGG | + | 50643:39281-39300 | None:intergenic | 40.0% | |
AGGAAGAAACCCTTTCATGA+GGG | - | 50643:38019-38038 | MS.gene89362:CDS | 40.0% | |
AGTATGGTGTAAAGGACGAA+TGG | - | 50643:37548-37567 | MS.gene89362:CDS | 40.0% | |
CAAATGGCAATCTCAAATCC+AGG | + | 50643:40200-40219 | None:intergenic | 40.0% | |
CAGAAATATTGGAGGCCATA+CGG | - | 50643:40064-40083 | MS.gene89362:CDS | 40.0% | |
CCAGAAACTCGAAGATCAAA+AGG | + | 50643:39124-39143 | None:intergenic | 40.0% | |
CGACGACATCTAGTAATGAA+AGG | - | 50643:36276-36295 | MS.gene89362:CDS | 40.0% | |
GAAAAAATGTCCAAGTCCAC+CGG | - | 50643:39259-39278 | MS.gene89362:CDS | 40.0% | |
GAAATTGAAGTCATTGGGGA+AGG | - | 50643:36973-36992 | MS.gene89362:CDS | 40.0% | |
GCAAGCTTAACTCTCTCATT+CGG | + | 50643:37667-37686 | None:intergenic | 40.0% | |
GCACACTTATTTCCAAACTC+CGG | + | 50643:37610-37629 | None:intergenic | 40.0% | |
GCCCAAGGAATAATCATTGT+TGG | - | 50643:37721-37740 | MS.gene89362:CDS | 40.0% | |
GTACAAAGGGAAGAAGTCTA+AGG | - | 50643:36721-36740 | MS.gene89362:CDS | 40.0% | |
GTACAAGAAGACAATGCCAT+GGG | - | 50643:36644-36663 | MS.gene89362:CDS | 40.0% | |
GTATAGGTTGTGATTGGAGA+AGG | - | 50643:36891-36910 | MS.gene89362:CDS | 40.0% | |
GTATGGTGTAAAGGACGAAT+GGG | - | 50643:37549-37568 | MS.gene89362:CDS | 40.0% | |
GTCTTGGAACACAAATACCA+TGG | - | 50643:38861-38880 | MS.gene89362:intron | 40.0% | |
GTGTTCCAAGACCAAAAGAT+CGG | + | 50643:38853-38872 | None:intergenic | 40.0% | |
GTTTGACCATACATAGTCTC+GGG | + | 50643:37193-37212 | None:intergenic | 40.0% | |
TAAGGCTCTTGAAGGAAAGA+AGG | - | 50643:37141-37160 | MS.gene89362:CDS | 40.0% | |
TAGGAAGAAACCCTTTCATG+AGG | - | 50643:38018-38037 | MS.gene89362:CDS | 40.0% | |
TATTCGGATGAGACACGAAA+TGG | - | 50643:38785-38804 | MS.gene89362:intron | 40.0% | |
TCCACACTCAGAAATATTGG+AGG | - | 50643:40056-40075 | MS.gene89362:CDS | 40.0% | |
TCTGCATAATGTGGACAGAT+AGG | + | 50643:39721-39740 | None:intergenic | 40.0% | |
TGAAGCTGGAGTTTGAGTAT+TGG | - | 50643:39095-39114 | MS.gene89362:CDS | 40.0% | |
TGAAGGTAACCATTCGTGTA+AGG | + | 50643:36446-36465 | None:intergenic | 40.0% | |
TGCTCCACACTCAGAAATAT+TGG | - | 50643:40053-40072 | MS.gene89362:CDS | 40.0% | |
TGGTGAAATTGAGGTTCTTG+GGG | - | 50643:40218-40237 | MS.gene89362:CDS | 40.0% | |
TGTTCCAAGACCAAAAGATC+GGG | + | 50643:38852-38871 | None:intergenic | 40.0% | |
TTAAGATCCTCTACAGCCAA+AGG | + | 50643:36863-36882 | None:intergenic | 40.0% | |
TTAGCTGAAGATTGCTTGTC+TGG | - | 50643:38752-38771 | MS.gene89362:intron | 40.0% | |
TTCATACCAGGCAATCTCTT+GGG | + | 50643:39422-39441 | None:intergenic | 40.0% | |
TTTCATACCAGGCAATCTCT+TGG | + | 50643:39423-39442 | None:intergenic | 40.0% | |
TTTGGCTGTAGAGGATCTTA+AGG | - | 50643:36862-36881 | MS.gene89362:CDS | 40.0% | |
! | AAGAACTTTTCACCCGGTTT+TGG | + | 50643:36407-36426 | None:intergenic | 40.0% |
! | AAGAAGCTAGGCCATTGATT+AGG | - | 50643:37767-37786 | MS.gene89362:CDS | 40.0% |
! | ACTAAGAGACGGATTTGCAT+TGG | + | 50643:36696-36715 | None:intergenic | 40.0% |
! | CTGGATTTGAGATTGCCATT+TGG | - | 50643:40198-40217 | MS.gene89362:CDS | 40.0% |
! | GTAGAGGATCTTAAGGCATT+TGG | - | 50643:36869-36888 | MS.gene89362:CDS | 40.0% |
! | TAAACAAGGTGCTCTTGCTA+CGG | - | 50643:39915-39934 | MS.gene89362:CDS | 40.0% |
! | TGCATTTTCTCTGTCCAAGT+TGG | - | 50643:36475-36494 | MS.gene89362:CDS | 40.0% |
! | TTCCCTTTTCCTTACACGAA+TGG | - | 50643:36434-36453 | MS.gene89362:CDS | 40.0% |
! | TTGCCAAAGAACTTTTCACC+CGG | + | 50643:36413-36432 | None:intergenic | 40.0% |
! | TTTGAAGAAGGAGGGTTTTG+TGG | - | 50643:39759-39778 | MS.gene89362:CDS | 40.0% |
!! | AGGAGAAAGCTTTTGGAAAC+AGG | - | 50643:37787-37806 | MS.gene89362:CDS | 40.0% |
!! | CCTTTTGATCTTCGAGTTTC+TGG | - | 50643:39121-39140 | MS.gene89362:CDS | 40.0% |
!! | CTTTAAGTTGGTTGAACCAG+TGG | - | 50643:38819-38838 | MS.gene89362:intron | 40.0% |
!! | GAGAGAGATTTTGAAGAAGG+AGG | - | 50643:39750-39769 | MS.gene89362:CDS | 40.0% |
!! | TGATCTTCGAGTTTCTGGTA+AGG | - | 50643:39126-39145 | MS.gene89362:CDS | 40.0% |
AAGAATGACGCGATTGCACT+CGG | - | 50643:40159-40178 | MS.gene89362:CDS | 45.0% | |
AAGAGTCCTGAAATTTCCGG+TGG | + | 50643:39278-39297 | None:intergenic | 45.0% | |
AAGGCCGATCAAATCATGAC+CGG | + | 50643:37365-37384 | None:intergenic | 45.0% | |
AAGGCTGCTGCAAAATCAAG+TGG | - | 50643:36740-36759 | MS.gene89362:CDS | 45.0% | |
AAGTGGGCAGGCTTATCAAT+GGG | - | 50643:36757-36776 | MS.gene89362:CDS | 45.0% | |
ACATCATCAGTCAGCTGTTG+AGG | + | 50643:39004-39023 | None:intergenic | 45.0% | |
ACATGTCGCCATTCTGCAAA+TGG | + | 50643:38955-38974 | None:intergenic | 45.0% | |
ACGCGATCAGCATAAGTAGA+TGG | + | 50643:39484-39503 | None:intergenic | 45.0% | |
ACTAGGAACTGTTCATCCCA+TGG | + | 50643:38881-38900 | None:intergenic | 45.0% | |
AGGCTGCTGCAAAATCAAGT+GGG | - | 50643:36741-36760 | MS.gene89362:CDS | 45.0% | |
ATTTGATCGGCCTTCCACTT+AGG | - | 50643:37371-37390 | MS.gene89362:CDS | 45.0% | |
CCATACTTCGCCCTAAATTC+TGG | + | 50643:37535-37554 | None:intergenic | 45.0% | |
CCATTTGCCTTTCATTGCAC+CGG | - | 50643:36545-36564 | MS.gene89362:CDS | 45.0% | |
CGCGATCAGCATAAGTAGAT+GGG | + | 50643:39483-39502 | None:intergenic | 45.0% | |
CGTACAAGAAGACAATGCCA+TGG | - | 50643:36643-36662 | MS.gene89362:CDS | 45.0% | |
CTCACCGGTCATGATTTGAT+CGG | - | 50643:37358-37377 | MS.gene89362:CDS | 45.0% | |
CTGAGTGTGGAGCAAAAGTT+CGG | + | 50643:40047-40066 | None:intergenic | 45.0% | |
CTGGAGAATACTTAGGCACT+CGG | + | 50643:40004-40023 | None:intergenic | 45.0% | |
CTGTACACAATAGCTTGACC+TGG | + | 50643:38632-38651 | None:intergenic | 45.0% | |
CTTTCGTTAGGTGGCAAATG+AGG | - | 50643:36951-36970 | MS.gene89362:CDS | 45.0% | |
GACCGTAAAACCCACTAACA+AGG | + | 50643:39579-39598 | None:intergenic | 45.0% | |
GCACTCTTCAGTGTAAGATC+GGG | + | 50643:39814-39833 | None:intergenic | 45.0% | |
GCGATCAGCATAAGTAGATG+GGG | + | 50643:39482-39501 | None:intergenic | 45.0% | |
GGAGCAAAGTTCAAGAAGCT+AGG | - | 50643:37755-37774 | MS.gene89362:CDS | 45.0% | |
GGCACTCTTCAGTGTAAGAT+CGG | + | 50643:39815-39834 | None:intergenic | 45.0% | |
GGCTTCTCGAAACATGAAGT+TGG | + | 50643:39557-39576 | None:intergenic | 45.0% | |
GTCTGGCATGAACCTGTATT+CGG | - | 50643:38769-38788 | MS.gene89362:intron | 45.0% | |
GTTGCACACCATTTGCAGAA+TGG | - | 50643:38944-38963 | MS.gene89362:CDS | 45.0% | |
TACTTGAAAGGATTCGCCCA+AGG | - | 50643:37706-37725 | MS.gene89362:CDS | 45.0% | |
TAGGGCGAAGTATGGTGTAA+AGG | - | 50643:37540-37559 | MS.gene89362:CDS | 45.0% | |
TCACCAGATCTTGACATCAC+CGG | + | 50643:38668-38687 | None:intergenic | 45.0% | |
TGAGTGTGGAGCAAAAGTTC+GGG | + | 50643:40046-40065 | None:intergenic | 45.0% | |
TGATGCTCCGGATGATTACA+TGG | - | 50643:37486-37505 | MS.gene89362:CDS | 45.0% | |
TTCAGGGCCATGTAATCATC+CGG | + | 50643:37496-37515 | None:intergenic | 45.0% | |
TTCGAGAAGCCCTTGTTAGT+GGG | - | 50643:39566-39585 | MS.gene89362:CDS | 45.0% | |
TTCGTGTCTCATCCGAATAC+AGG | + | 50643:38784-38803 | None:intergenic | 45.0% | |
TTGAGACCCGAGACTATGTA+TGG | - | 50643:37184-37203 | MS.gene89362:CDS | 45.0% | |
TTGCAGAATGGCGACATGTA+TGG | - | 50643:38956-38975 | MS.gene89362:CDS | 45.0% | |
TTTCGAGAAGCCCTTGTTAG+TGG | - | 50643:39565-39584 | MS.gene89362:CDS | 45.0% | |
! | AACAGCTGACTGATGATGTC+TGG | - | 50643:39005-39024 | MS.gene89362:CDS | 45.0% |
! | AACCGTGTGCTGATCATGAT+AGG | - | 50643:37041-37060 | MS.gene89362:CDS | 45.0% |
! | AATGCATGGGTTTTGCCTGA+TGG | - | 50643:37214-37233 | MS.gene89362:CDS | 45.0% |
! | ACAGCTGACTGATGATGTCT+GGG | - | 50643:39006-39025 | MS.gene89362:CDS | 45.0% |
! | ACCGTGTGCTGATCATGATA+GGG | - | 50643:37042-37061 | MS.gene89362:CDS | 45.0% |
! | CCAGAATTTAGGGCGAAGTA+TGG | - | 50643:37532-37551 | MS.gene89362:CDS | 45.0% |
! | GCCTCCAATATTTCTGAGTG+TGG | + | 50643:40060-40079 | None:intergenic | 45.0% |
! | GGTTCAAAAATGGTGGGAAG+AGG | - | 50643:36346-36365 | MS.gene89362:CDS | 45.0% |
! | GTTTTGTGGTGAAAGCAGGT+TGG | - | 50643:39773-39792 | MS.gene89362:CDS | 45.0% |
! | TAATCATCCGGAGCATCACT+GGG | + | 50643:37484-37503 | None:intergenic | 45.0% |
! | TCGTTGCTTTGACAGATCAG+TGG | - | 50643:38696-38715 | MS.gene89362:intron | 45.0% |
! | TTTTCCACCTTTGGCTGTAG+AGG | - | 50643:36853-36872 | MS.gene89362:CDS | 45.0% |
!! | AACTTTTCACCCGGTTTTGG+AGG | + | 50643:36404-36423 | None:intergenic | 45.0% |
!! | GATGAATAAAGGTACTGGGG+TGG | - | 50643:37447-37466 | MS.gene89362:CDS | 45.0% |
!! | GTTTCTGAGGTACTCTTGAG+TGG | + | 50643:37321-37340 | None:intergenic | 45.0% |
!! | TGCAGTAGATGCTGATTCTG+TGG | - | 50643:40311-40330 | MS.gene89362:CDS | 45.0% |
!! | TGGGAGATTTTGAGGAGTGT+TGG | - | 50643:36776-36795 | MS.gene89362:CDS | 45.0% |
!! | TTGAGTGGTTCTGGTAAGCA+AGG | + | 50643:37306-37325 | None:intergenic | 45.0% |
!!! | ACTTTTCACCCGGTTTTGGA+GGG | + | 50643:36403-36422 | None:intergenic | 45.0% |
!!! | GCCCTTGTTAGTGGGTTTTA+CGG | - | 50643:39574-39593 | MS.gene89362:CDS | 45.0% |
!!! | TAGTGGGTTTTACGGTCTTC+AGG | - | 50643:39582-39601 | MS.gene89362:CDS | 45.0% |
ACCTACAGAACTCTGCCGTA+TGG | + | 50643:40082-40101 | None:intergenic | 50.0% | |
ACTTGCTTGCTTGAGCTCAC+CGG | - | 50643:37343-37362 | MS.gene89362:CDS | 50.0% | |
AGAAGCTTTCATCGGCATGC+CGG | + | 50643:36567-36586 | None:intergenic | 50.0% | |
AGAATGACGCGATTGCACTC+GGG | - | 50643:40160-40179 | MS.gene89362:CDS | 50.0% | |
AGATCCTCTACAGCCAAAGG+TGG | + | 50643:36860-36879 | None:intergenic | 50.0% | |
AGCATAAGTAGATGGGGCAC+CGG | + | 50643:39476-39495 | None:intergenic | 50.0% | |
AGTTAAGCTTGCAGACGCCA+AGG | - | 50643:37675-37694 | MS.gene89362:CDS | 50.0% | |
ATCTCACCCAAGAGATTGCC+TGG | - | 50643:39413-39432 | MS.gene89362:CDS | 50.0% | |
CAAGTGGGCAGGCTTATCAA+TGG | - | 50643:36756-36775 | MS.gene89362:CDS | 50.0% | |
CAATCTCAAATCCAGGGCCA+GGG | + | 50643:40193-40212 | None:intergenic | 50.0% | |
CAATTTGGTCCAAGCGTCAC+TGG | - | 50643:39194-39213 | MS.gene89362:CDS | 50.0% | |
CATTGTCTTCTTGTACGCCG+GGG | + | 50643:36640-36659 | None:intergenic | 50.0% | |
CCAAGTCCACCGGAAATTTC+AGG | - | 50643:39269-39288 | MS.gene89362:CDS | 50.0% | |
CCGGTGCAATGAAAGGCAAA+TGG | + | 50643:36548-36567 | None:intergenic | 50.0% | |
GCATTGTCTTCTTGTACGCC+GGG | + | 50643:36641-36660 | None:intergenic | 50.0% | |
GCCCTATCATGATCAGCACA+CGG | + | 50643:37046-37065 | None:intergenic | 50.0% | |
GCTGATCATGATAGGGCTAG+TGG | - | 50643:37049-37068 | MS.gene89362:CDS | 50.0% | |
GCTTGGACCAAATTGCAGTG+TGG | + | 50643:39189-39208 | None:intergenic | 50.0% | |
GGCATTGTCTTCTTGTACGC+CGG | + | 50643:36642-36661 | None:intergenic | 50.0% | |
GTGAGCTCAAGCAAGCAAGT+GGG | + | 50643:37343-37362 | None:intergenic | 50.0% | |
TGACGCAACACGTTTCGCTT+TGG | - | 50643:39324-39343 | MS.gene89362:CDS | 50.0% | |
TGCTGCAAAATCAAGTGGGC+AGG | - | 50643:36745-36764 | MS.gene89362:CDS | 50.0% | |
TGGCGAAAACCCTCCAAAAC+CGG | - | 50643:36391-36410 | MS.gene89362:CDS | 50.0% | |
TTACGGTCTTCAGGCTGCAA+GGG | - | 50643:39591-39610 | MS.gene89362:CDS | 50.0% | |
TTGTGTACAGTGAACCCGAG+AGG | - | 50643:38642-38661 | MS.gene89362:intron | 50.0% | |
TTTACGGTCTTCAGGCTGCA+AGG | - | 50643:39590-39609 | MS.gene89362:CDS | 50.0% | |
! | AGCAAGCAAGTGGGTTTCTG+AGG | + | 50643:37334-37353 | None:intergenic | 50.0% |
! | CATGATAGGGCTAGTGGTGA+AGG | - | 50643:37055-37074 | MS.gene89362:CDS | 50.0% |
! | CCTGAAATTTCCGGTGGACT+TGG | + | 50643:39272-39291 | None:intergenic | 50.0% |
! | GAGGTACTCTTGAGTGGTTC+TGG | + | 50643:37315-37334 | None:intergenic | 50.0% |
! | GCTGATTCTGTGGCTAAAGC+TGG | - | 50643:40321-40340 | MS.gene89362:CDS | 50.0% |
! | GGCAAATGGCAGAAGCACAT+TGG | + | 50643:36534-36553 | None:intergenic | 50.0% |
! | GTAATCATCCGGAGCATCAC+TGG | + | 50643:37485-37504 | None:intergenic | 50.0% |
! | GTCCAAGTTGGAATTCGCAG+CGG | - | 50643:36487-36506 | MS.gene89362:CDS | 50.0% |
! | TGCTCCCGATCTTTTGGTCT+TGG | - | 50643:38845-38864 | MS.gene89362:intron | 50.0% |
!! | GAGGGTTTTGTGGTGAAAGC+AGG | - | 50643:39769-39788 | MS.gene89362:CDS | 50.0% |
!! | GCGGCTTTTTACCGATTGAG+AGG | - | 50643:36506-36525 | MS.gene89362:CDS | 50.0% |
AACGCAAGCGGAGACCTAAG+TGG | + | 50643:37388-37407 | None:intergenic | 55.0% | |
AGATGACAGTTGGGACTCCC+TGG | + | 50643:40380-40399 | None:intergenic | 55.0% | |
AGCCGCTGCGAATTCCAACT+TGG | + | 50643:36492-36511 | None:intergenic | 55.0% | |
AGGCCGGTGATGTCAAGATC+TGG | - | 50643:38662-38681 | MS.gene89362:intron | 55.0% | |
CAAGCGGAGACCTAAGTGGA+AGG | + | 50643:37384-37403 | None:intergenic | 55.0% | |
CCATTGCACCTAAACCCACG+AGG | + | 50643:39220-39239 | None:intergenic | 55.0% | |
CCTCGTGGGTTTAGGTGCAA+TGG | - | 50643:39217-39236 | MS.gene89362:CDS | 55.0% | |
CGTTTCGCTTTGGCAGATGC+TGG | - | 50643:39334-39353 | MS.gene89362:CDS | 55.0% | |
GAATGACGCGATTGCACTCG+GGG | - | 50643:40161-40180 | MS.gene89362:CDS | 55.0% | |
GATGACAGTTGGGACTCCCT+GGG | + | 50643:40379-40398 | None:intergenic | 55.0% | |
GCAATCTCAAATCCAGGGCC+AGG | + | 50643:40194-40213 | None:intergenic | 55.0% | |
GCACACGGTTGTCCATCCAA+AGG | + | 50643:37031-37050 | None:intergenic | 55.0% | |
GCACATTGGCGCCTCTCAAT+CGG | + | 50643:36520-36539 | None:intergenic | 55.0% | |
GCCATACGGCAGAGTTCTGT+AGG | - | 50643:40078-40097 | MS.gene89362:CDS | 55.0% | |
GCTTTGGCAGATGCTGGTGA+TGG | - | 50643:39340-39359 | MS.gene89362:CDS | 55.0% | |
GGCGAAAACCCTCCAAAACC+GGG | - | 50643:36392-36411 | MS.gene89362:CDS | 55.0% | |
GGTGAGCTCAAGCAAGCAAG+TGG | + | 50643:37344-37363 | None:intergenic | 55.0% | |
TCTTGACATCACCGGCCTCT+CGG | + | 50643:38660-38679 | None:intergenic | 55.0% | |
TTCTTGTACGCCGGGGAACA+CGG | + | 50643:36633-36652 | None:intergenic | 55.0% | |
!! | AGATCGGGAGCATCAGCTGT+TGG | + | 50643:39799-39818 | None:intergenic | 55.0% |
!! | TGGGCTTGCTCCCGATCTTT+TGG | - | 50643:38839-38858 | MS.gene89362:intron | 55.0% |
!!! | GGTTTTGGAGGGTTTTCGCC+AGG | + | 50643:36392-36411 | None:intergenic | 55.0% |
AAGATCGGGAGCAAGCCCAC+TGG | + | 50643:38838-38857 | None:intergenic | 60.0% | |
ACAGTTGGGACTCCCTGGGA+TGG | + | 50643:40375-40394 | None:intergenic | 60.0% | |
ATCATCGTCGGCAGCACCCT+CGG | + | 50643:36672-36691 | None:intergenic | 60.0% | |
CAGTGTGCCCAGTGATGCTC+CGG | - | 50643:37474-37493 | MS.gene89362:CDS | 60.0% | |
CGGCATGCCGGTGCAATGAA+AGG | + | 50643:36555-36574 | None:intergenic | 60.0% | |
CTTGACATCACCGGCCTCTC+GGG | + | 50643:38659-38678 | None:intergenic | 60.0% | |
GTACAGTGAACCCGAGAGGC+CGG | - | 50643:38646-38665 | MS.gene89362:intron | 60.0% | |
TCTTGTACGCCGGGGAACAC+GGG | + | 50643:36632-36651 | None:intergenic | 60.0% | |
! | AGACAATGCCATGGGCACCG+AGG | - | 50643:36652-36671 | MS.gene89362:CDS | 60.0% |
! | GTCACTGGCCTCGTGGGTTT+AGG | - | 50643:39209-39228 | MS.gene89362:CDS | 60.0% |
!! | GACAATGCCATGGGCACCGA+GGG | - | 50643:36653-36672 | MS.gene89362:CDS | 60.0% |
GGAAACCCACCCGTGTTCCC+CGG | - | 50643:36620-36639 | MS.gene89362:CDS | 65.0% | |
GTTGGGACTCCCTGGGATGG+AGG | + | 50643:40372-40391 | None:intergenic | 65.0% | |
TGCACTCGGGGAACAAGCCC+TGG | - | 50643:40173-40192 | MS.gene89362:CDS | 65.0% | |
! | CCAAGCGTCACTGGCCTCGT+GGG | - | 50643:39203-39222 | MS.gene89362:CDS | 65.0% |
! | CGGAGCATCACTGGGCACAC+TGG | + | 50643:37476-37495 | None:intergenic | 65.0% |
! | TCCAAGCGTCACTGGCCTCG+TGG | - | 50643:39202-39221 | MS.gene89362:CDS | 65.0% |
CCCACGAGGCCAGTGACGCT+TGG | + | 50643:39206-39225 | None:intergenic | 70.0% | |
GTACGCCGGGGAACACGGGT+GGG | + | 50643:36628-36647 | None:intergenic | 70.0% | |
TGTACGCCGGGGAACACGGG+TGG | + | 50643:36629-36648 | None:intergenic | 70.0% | |
CGGGGAACAAGCCCTGGCCC+TGG | - | 50643:40179-40198 | MS.gene89362:CDS | 75.0% | |
!! | GGCAGCACCCTCGGTGCCCA+TGG | + | 50643:36663-36682 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
50643 | gene | 36272 | 40413 | 36272 | ID=MS.gene89362 |
50643 | mRNA | 36272 | 40413 | 36272 | ID=MS.gene89362.t1;Parent=MS.gene89362 |
50643 | exon | 38877 | 40413 | 38877 | ID=MS.gene89362.t1.exon1;Parent=MS.gene89362.t1 |
50643 | CDS | 38877 | 40413 | 38877 | ID=cds.MS.gene89362.t1;Parent=MS.gene89362.t1 |
50643 | exon | 36272 | 38052 | 36272 | ID=MS.gene89362.t1.exon2;Parent=MS.gene89362.t1 |
50643 | CDS | 36272 | 38052 | 36272 | ID=cds.MS.gene89362.t1;Parent=MS.gene89362.t1 |
Gene Sequence |
Protein sequence |