Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065875.t1 | XP_003607408.1 | 99 | 806 | 8 | 0 | 1 | 806 | 1 | 806 | 0.00E+00 | 1636.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065875.t1 | Q9ZTS1 | 75.5 | 800 | 189 | 3 | 8 | 806 | 8 | 801 | 0.0e+00 | 1275.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065875.t1 | G7JSP8 | 99.0 | 806 | 8 | 0 | 1 | 806 | 1 | 806 | 0.0e+00 | 1636.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050009 | MS.gene065875 | 0.811683 | 6.19E-51 | -1.69E-46 |
MS.gene052373 | MS.gene065875 | 0.844031 | 9.72E-59 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065875.t1 | MTR_4g077700 | 99.007 | 806 | 8 | 0 | 1 | 806 | 1 | 806 | 0.0 | 1664 |
MS.gene065875.t1 | MTR_4g122580 | 82.382 | 806 | 135 | 3 | 1 | 806 | 1 | 799 | 0.0 | 1369 |
MS.gene065875.t1 | MTR_1g115295 | 26.974 | 608 | 350 | 22 | 19 | 598 | 59 | 600 | 3.92e-48 | 181 |
MS.gene065875.t1 | MTR_3g093870 | 41.057 | 246 | 127 | 3 | 578 | 806 | 144 | 388 | 1.30e-44 | 166 |
MS.gene065875.t1 | MTR_4g040350 | 47.619 | 168 | 74 | 2 | 648 | 805 | 93 | 256 | 2.43e-37 | 141 |
MS.gene065875.t1 | MTR_4g122620 | 42.945 | 163 | 49 | 6 | 117 | 267 | 13 | 143 | 1.29e-28 | 114 |
MS.gene065875.t1 | MTR_4g122620 | 64.615 | 65 | 11 | 1 | 349 | 413 | 142 | 194 | 2.77e-15 | 75.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065875.t1 | AT4G13780 | 74.349 | 807 | 196 | 6 | 1 | 806 | 1 | 797 | 0.0 | 1254 |
MS.gene065875.t1 | AT2G40660 | 50.000 | 164 | 81 | 1 | 643 | 806 | 227 | 389 | 2.37e-43 | 162 |
MS.gene065875.t1 | AT3G55400 | 26.576 | 587 | 336 | 20 | 13 | 576 | 67 | 581 | 1.91e-41 | 161 |
MS.gene065875.t1 | AT3G55400 | 27.400 | 500 | 282 | 17 | 13 | 494 | 67 | 503 | 2.19e-37 | 148 |
MS.gene065875.t1 | AT3G59980 | 46.746 | 169 | 82 | 2 | 644 | 805 | 105 | 272 | 3.71e-37 | 141 |
MS.gene065875.t1 | AT5G02680 | 83.333 | 36 | 6 | 0 | 382 | 417 | 54 | 89 | 3.46e-11 | 62.0 |
Find 197 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTGGAGTTGTTTCAGTTTA+TGG | 0.110658 | 4.2:+32188975 | MS.gene065875:CDS |
AATATAAGCTTTGATGAATT+TGG | 0.147482 | 4.2:+32187231 | MS.gene065875:CDS |
AACAAATTCATGGTTCAAAA+TGG | 0.185409 | 4.2:+32188703 | MS.gene065875:CDS |
GTCTCCCAAACTTTCTTCTT+TGG | 0.208381 | 4.2:-32196357 | None:intergenic |
TTGCTCGATATTGTCGTCTT+AGG | 0.215733 | 4.2:+32186127 | MS.gene065875:CDS |
AGTAAAGGCGTCGGGGTATT+TGG | 0.251715 | 4.2:+32191899 | MS.gene065875:CDS |
TTGAAGAAAACTAAAGTTTC+AGG | 0.254594 | 4.2:+32194418 | MS.gene065875:CDS |
ATTTCTTGAGCTCCCTCTTT+TGG | 0.255185 | 4.2:+32188610 | MS.gene065875:CDS |
AGCCTTGTGATGGTAATTTC+TGG | 0.259177 | 4.2:-32195242 | None:intergenic |
TGCTCGATATTGTCGTCTTA+GGG | 0.267863 | 4.2:+32186128 | MS.gene065875:CDS |
GTAAGTGCCGGTCATAAAAT+TGG | 0.269958 | 4.2:+32194178 | MS.gene065875:CDS |
TACTTGGAACTGGTCAAAAT+TGG | 0.283900 | 4.2:+32191245 | MS.gene065875:CDS |
TTCTCCAACAAGAGCAGAAC+TGG | 0.292326 | 4.2:-32196286 | None:intergenic |
GTGGAGTTGTTTCAGTTTAT+GGG | 0.293016 | 4.2:+32188976 | MS.gene065875:CDS |
CAACAAAGTTGCTGCATATA+TGG | 0.295135 | 4.2:+32192537 | MS.gene065875:CDS |
TGAATCCAAAGAAGAAAGTT+TGG | 0.297006 | 4.2:+32196352 | MS.gene065875:CDS |
ATACTTGTCACAAATCTCTT+TGG | 0.301274 | 4.2:-32186232 | None:intergenic |
CTTTCACTTTCTGATGATAA+AGG | 0.302687 | 4.2:+32194121 | MS.gene065875:CDS |
AGACTGAAAGATGGCATAAA+AGG | 0.304480 | 4.2:-32193712 | None:intergenic |
GTATCTTCTTGCTTGTTTGT+TGG | 0.305613 | 4.2:+32193687 | MS.gene065875:CDS |
ACTAACCTGCTTCATAATTC+AGG | 0.306018 | 4.2:-32191300 | None:intergenic |
CATATATGCAGCAACTTTGT+TGG | 0.315455 | 4.2:-32192536 | None:intergenic |
TCATACTCACACCCTGGAAT+TGG | 0.326808 | 4.2:-32187568 | None:intergenic |
TGCTTCATAATTCAGGTATT+CGG | 0.336714 | 4.2:-32191293 | None:intergenic |
TTGATGCCCCTCATGGTTGC+TGG | 0.337669 | 4.2:-32195542 | None:intergenic |
TTTGGATTCAAGAGTTCATC+TGG | 0.338301 | 4.2:-32196339 | None:intergenic |
GAGGGTACCTGCCCAATTCC+AGG | 0.340471 | 4.2:+32187556 | MS.gene065875:CDS |
CTAATATTCCGGTTGAAGTA+TGG | 0.343710 | 4.2:+32191939 | MS.gene065875:CDS |
ATCTGCGGTACCGATGAGTA+TGG | 0.345827 | 4.2:+32186168 | MS.gene065875:CDS |
CCGCCCAGTTCTGCTCTTGT+TGG | 0.347348 | 4.2:+32196282 | MS.gene065875:CDS |
ATGAAGAAGTAGAAGTCTTC+AGG | 0.354632 | 4.2:+32194320 | MS.gene065875:CDS |
GATATTACTTGCTAACAAAT+AGG | 0.360848 | 4.2:+32191963 | MS.gene065875:CDS |
AAAATTGCAATGAGCATATC+TGG | 0.367625 | 4.2:+32193458 | MS.gene065875:CDS |
TGGCACACTTCAGTTTGCTC+AGG | 0.367664 | 4.2:-32187267 | None:intergenic |
CTTTGTAGGAAACTGAGTTT+TGG | 0.372999 | 4.2:+32193602 | MS.gene065875:intron |
TCAATTCTGTCGGATTTAGA+AGG | 0.374112 | 4.2:-32187627 | None:intergenic |
TGCAACTTATCTTCCAAAAG+AGG | 0.374210 | 4.2:-32188623 | None:intergenic |
TACTTGTCACAAATCTCTTT+GGG | 0.375574 | 4.2:-32186231 | None:intergenic |
ATCAGGAACAGTGGGAATAA+TGG | 0.381536 | 4.2:-32192473 | None:intergenic |
TGAAACAACTCCACATTCTC+AGG | 0.383989 | 4.2:-32188967 | None:intergenic |
ATTGGAAGGTGTTCTATGTT+TGG | 0.384669 | 4.2:+32188872 | MS.gene065875:intron |
GAACACCAAAGCCATTGTTC+AGG | 0.386114 | 4.2:+32194200 | MS.gene065875:CDS |
GCTAAACCAACCTGCAGGTT+TGG | 0.387299 | 4.2:-32192198 | None:intergenic |
TGCAAAAGATACTAATATTC+CGG | 0.387319 | 4.2:+32191928 | MS.gene065875:CDS |
CTATTCAAACAACAAATTCA+TGG | 0.387890 | 4.2:+32188693 | MS.gene065875:CDS |
CCTCATCTCGGCAACATCAT+TGG | 0.412465 | 4.2:+32185951 | MS.gene065875:CDS |
GCGCCGAAGCTTCCCGTTGA+AGG | 0.417667 | 4.2:+32185879 | MS.gene065875:CDS |
TGAGGGGAATGCATATTTGC+AGG | 0.426344 | 4.2:+32193481 | MS.gene065875:CDS |
GAATCCAAAGAAGAAAGTTT+GGG | 0.428068 | 4.2:+32196353 | MS.gene065875:CDS |
CCAGTTCCAAGTAGAGTAGA+TGG | 0.428164 | 4.2:-32191235 | None:intergenic |
ACAAATTCATGGTTCAAAAT+GGG | 0.429611 | 4.2:+32188704 | MS.gene065875:CDS |
TAATATCTCCATACTTCAAC+CGG | 0.433672 | 4.2:-32191947 | None:intergenic |
CATACTCACACCCTGGAATT+GGG | 0.434348 | 4.2:-32187567 | None:intergenic |
CGGCAGGCTACACACGTGAT+TGG | 0.435417 | 4.2:+32188926 | MS.gene065875:CDS |
TTTCCTTCAACGGGAAGCTT+CGG | 0.440888 | 4.2:-32185882 | None:intergenic |
CCATCTACTCTACTTGGAAC+TGG | 0.441914 | 4.2:+32191235 | MS.gene065875:CDS |
TTTCGAAGAGTAAAGGCGTC+GGG | 0.442818 | 4.2:+32191891 | MS.gene065875:CDS |
TACCGAGCTTCTGAATAACT+TGG | 0.443002 | 4.2:+32192142 | MS.gene065875:CDS |
TGGAGAAAGAATCACATTCC+CGG | 0.448358 | 4.2:+32196302 | MS.gene065875:CDS |
TAACAAGGGAGCAGAGAGAT+TGG | 0.452678 | 4.2:-32193642 | None:intergenic |
AGCTCCCTGAACAATGGCTT+TGG | 0.453002 | 4.2:-32194205 | None:intergenic |
ATGTTTCCATCTACTCTACT+TGG | 0.469018 | 4.2:+32191229 | MS.gene065875:CDS |
GTTGTTTCAGTTTATGGGAA+AGG | 0.471613 | 4.2:+32188981 | MS.gene065875:CDS |
TTGAAGGAAGTCAAGCTGAC+AGG | 0.471653 | 4.2:+32194350 | MS.gene065875:CDS |
AGCAGCAAGAACCATTGCTT+GGG | 0.478236 | 4.2:-32195567 | None:intergenic |
AAAGCCATTGTTCAGGGAGC+TGG | 0.479693 | 4.2:+32194207 | MS.gene065875:CDS |
TCCCAAGTTATTCAGAAGCT+CGG | 0.482067 | 4.2:-32192144 | None:intergenic |
ACACACGTGATTGGGAGAAA+TGG | 0.483792 | 4.2:+32188935 | MS.gene065875:CDS |
TGAGGAACGTTGTTGACATA+GGG | 0.485004 | 4.2:-32185933 | None:intergenic |
GGCAGGCTACACACGTGATT+GGG | 0.487493 | 4.2:+32188927 | MS.gene065875:CDS |
CCGTATCGTCCCATTGCCTA+TGG | 0.487513 | 4.2:-32196472 | None:intergenic |
ATGAGGAACGTTGTTGACAT+AGG | 0.488800 | 4.2:-32185934 | None:intergenic |
GGCACACTTCAGTTTGCTCA+GGG | 0.495259 | 4.2:-32187266 | None:intergenic |
ACATACAGTGAATCTGCATC+AGG | 0.495378 | 4.2:-32195305 | None:intergenic |
AGATGTCTGTGGTGGGATCA+TGG | 0.497749 | 4.2:+32188660 | MS.gene065875:CDS |
AACACCAAAGCCATTGTTCA+GGG | 0.498027 | 4.2:+32194201 | MS.gene065875:CDS |
TTGGGAATCTTCAATTCTGT+CGG | 0.499554 | 4.2:-32187637 | None:intergenic |
AAGCAGCAAGAACCATTGCT+TGG | 0.500918 | 4.2:-32195568 | None:intergenic |
ACGTTGCGCTTTCCTTCAAC+GGG | 0.501448 | 4.2:-32185891 | None:intergenic |
ATCACATTCCCGGGGTATGA+AGG | 0.502161 | 4.2:+32196312 | MS.gene065875:CDS |
GGAGAAAGAATCACATTCCC+GGG | 0.504503 | 4.2:+32196303 | MS.gene065875:CDS |
TACCATGGTGTGATCAGCAT+TGG | 0.507261 | 4.2:-32195591 | None:intergenic |
TATGCCATCTTTCAGTCTTG+AGG | 0.507830 | 4.2:+32193717 | MS.gene065875:CDS |
GGAGCAATACATAGAGTCAA+TGG | 0.511638 | 4.2:+32192558 | MS.gene065875:CDS |
TTGGGATTTGATGCCCCTCA+TGG | 0.513052 | 4.2:-32195549 | None:intergenic |
GGAGTTTACTACCTTGCACT+TGG | 0.515669 | 4.2:-32187656 | None:intergenic |
CCCTGGGATCTTGTAAGTGC+CGG | 0.516485 | 4.2:+32194166 | MS.gene065875:CDS |
GCAACTTATCTTCCAAAAGA+GGG | 0.517389 | 4.2:-32188622 | None:intergenic |
GTCTTCAGGAAGAAGTTTGA+AGG | 0.518322 | 4.2:+32194334 | MS.gene065875:CDS |
CGGTTCCATCCATAGGCAAT+GGG | 0.521640 | 4.2:+32196463 | MS.gene065875:CDS |
ATTTGCACGGTTCCATCCAT+AGG | 0.521790 | 4.2:+32196456 | MS.gene065875:CDS |
CTTGTTATGAAAACTGCTGC+CGG | 0.522580 | 4.2:+32193658 | MS.gene065875:CDS |
TATACCACTTGATGAAATGC+AGG | 0.523988 | 4.2:+32195388 | MS.gene065875:CDS |
GACGTTGCGCTTTCCTTCAA+CGG | 0.527064 | 4.2:-32185892 | None:intergenic |
TCTGGATTGCCTTCATACCC+CGG | 0.527809 | 4.2:-32196321 | None:intergenic |
TGTGCACCTTTAGGTTGAGT+TGG | 0.528372 | 4.2:+32196254 | MS.gene065875:intron |
GTTTGGTTTGATGCTCCGAT+TGG | 0.534698 | 4.2:+32188889 | MS.gene065875:CDS |
CACATCAGCTGGCATTTGCA+CGG | 0.536466 | 4.2:+32196443 | MS.gene065875:CDS |
ACAAGGCTTGATATTCGAGT+TGG | 0.537666 | 4.2:+32195257 | MS.gene065875:CDS |
ATTCCACTGACCACATCAGC+TGG | 0.538255 | 4.2:+32196432 | MS.gene065875:CDS |
TTGTTATGAAAACTGCTGCC+GGG | 0.539229 | 4.2:+32193659 | MS.gene065875:CDS |
CTTAGCCGATCGACTTGTGG+AGG | 0.539801 | 4.2:+32187537 | MS.gene065875:CDS |
GTCAACAACGTTCCTCATCT+CGG | 0.540137 | 4.2:+32185939 | MS.gene065875:CDS |
GAGTCGCCACTTACATCATC+AGG | 0.542575 | 4.2:-32192490 | None:intergenic |
ACCGGCACTTACAAGATCCC+AGG | 0.545961 | 4.2:-32194167 | None:intergenic |
GTTCTTAGCCGATCGACTTG+TGG | 0.546717 | 4.2:+32187534 | MS.gene065875:CDS |
TAGTCCTCGTATTTGTGATA+CGG | 0.547604 | 4.2:+32188580 | MS.gene065875:CDS |
ATCGTCCCATTGCCTATGGA+TGG | 0.550835 | 4.2:-32196468 | None:intergenic |
CTCTGAGGACACATTACAGC+AGG | 0.552010 | 4.2:+32187326 | MS.gene065875:CDS |
TGAAGGAAGTCAAGCTGACA+GGG | 0.554340 | 4.2:+32194351 | MS.gene065875:CDS |
GTGATTGATATATATCCAAT+CGG | 0.554368 | 4.2:-32188904 | None:intergenic |
TCGAATATCAAGCCTTGTGA+TGG | 0.555943 | 4.2:-32195252 | None:intergenic |
TCGAGTTGGTCTCATAAAGA+AGG | 0.557778 | 4.2:+32195271 | MS.gene065875:CDS |
TGCAACGGAGACTAAAGCAT+TGG | 0.558923 | 4.2:+32186194 | MS.gene065875:CDS |
TTTACTGCGATACATGCAAA+AGG | 0.559169 | 4.2:+32187512 | MS.gene065875:CDS |
GTTCTCACACTGATCCCCTC+TGG | 0.559234 | 4.2:-32187596 | None:intergenic |
CCAATGATGTTGCCGAGATG+AGG | 0.561565 | 4.2:-32185951 | None:intergenic |
TCACCAAAATGACGGAAGAT+CGG | 0.561855 | 4.2:+32185853 | None:intergenic |
CCATAGGCAATGGGACGATA+CGG | 0.562052 | 4.2:+32196472 | MS.gene065875:CDS |
ACCGAGCTTCTGAATAACTT+GGG | 0.563182 | 4.2:+32192143 | MS.gene065875:CDS |
CTGGATTGCCTTCATACCCC+GGG | 0.563744 | 4.2:-32196320 | None:intergenic |
ACGGTTCCATCCATAGGCAA+TGG | 0.563965 | 4.2:+32196462 | MS.gene065875:CDS |
CTCACACCCTGGAATTGGGC+AGG | 0.569388 | 4.2:-32187563 | None:intergenic |
AGGGTACCTGCCCAATTCCA+GGG | 0.570926 | 4.2:+32187557 | MS.gene065875:CDS |
CGTGCAAATGCCAGCTGATG+TGG | 0.574978 | 4.2:-32196442 | None:intergenic |
TGACAGGGTTGTTCGTGCAG+AGG | 0.576831 | 4.2:+32194366 | MS.gene065875:CDS |
GAAACAACTCCACATTCTCA+GGG | 0.577888 | 4.2:-32188966 | None:intergenic |
GGATATATATCAATCACGGC+AGG | 0.586570 | 4.2:+32188910 | MS.gene065875:CDS |
ATACATAGAGTCAATGGAGA+AGG | 0.586721 | 4.2:+32192564 | MS.gene065875:CDS |
TGCAATGAGCATATCTGGTG+AGG | 0.586994 | 4.2:+32193463 | MS.gene065875:CDS |
GCAATGAGCATATCTGGTGA+GGG | 0.587736 | 4.2:+32193464 | MS.gene065875:CDS |
GCAGCAAAAGCATCATCAAG+TGG | 0.587775 | 4.2:+32195194 | MS.gene065875:CDS |
CAAACCTGCATTTCATCAAG+TGG | 0.588160 | 4.2:-32195392 | None:intergenic |
CGTTGCAGTCCCATACTCAT+CGG | 0.590342 | 4.2:-32186178 | None:intergenic |
GCATTACCAGAGATCTGAAG+TGG | 0.591467 | 4.2:+32188741 | MS.gene065875:CDS |
CACGTGATTGGGAGAAATGG+TGG | 0.593366 | 4.2:+32188938 | MS.gene065875:CDS |
GTGAGTATGATTCTGCCAGA+GGG | 0.593875 | 4.2:+32187581 | MS.gene065875:CDS |
GAATACCTGAATTATGAAGC+AGG | 0.594242 | 4.2:+32191295 | MS.gene065875:CDS |
ATTACCTCAAGACTGAAAGA+TGG | 0.597613 | 4.2:-32193721 | None:intergenic |
AGGGGAGAGCGCTAGTGATG+AGG | 0.598406 | 4.2:-32185914 | None:intergenic |
TGGCAATAAAACTCAAAACT+CGG | 0.598920 | 4.2:-32192178 | None:intergenic |
GGTACCCTCCACAAGTCGAT+CGG | 0.599711 | 4.2:-32187542 | None:intergenic |
GCTCGATATTGTCGTCTTAG+GGG | 0.599763 | 4.2:+32186129 | MS.gene065875:CDS |
TTCACAAGGAGGTCTACGAT+TGG | 0.599884 | 4.2:+32187205 | MS.gene065875:CDS |
TCTCCAACAAGAGCAGAACT+GGG | 0.601244 | 4.2:-32196285 | None:intergenic |
AGCAAGAAGATACACAATCC+CGG | 0.602614 | 4.2:-32193677 | None:intergenic |
GAGGGAGCTCAAGAAATAAG+TGG | 0.603079 | 4.2:-32188604 | None:intergenic |
GTAAAGGTTAAACTAAAGCA+AGG | 0.605462 | 4.2:+32193431 | MS.gene065875:intron |
ACTGTTCCTGATGATGTAAG+TGG | 0.610282 | 4.2:+32192484 | MS.gene065875:CDS |
CGAAAATAATTGGCTCTCTG+AGG | 0.610435 | 4.2:+32187311 | MS.gene065875:CDS |
TCTGCGGTACCGATGAGTAT+GGG | 0.610606 | 4.2:+32186169 | MS.gene065875:CDS |
GATTGGATATATATCAATCA+CGG | 0.614894 | 4.2:+32188906 | MS.gene065875:CDS |
ATTGAAGATTCCCAAGTGCA+AGG | 0.615621 | 4.2:+32187645 | MS.gene065875:CDS |
CAAGCAACTAAATTTGTCTG+TGG | 0.621913 | 4.2:+32194090 | MS.gene065875:CDS |
TAATGACTTACAGTATGGAA+TGG | 0.623528 | 4.2:-32189012 | None:intergenic |
ACCTAAAACCAGCAACCATG+AGG | 0.626255 | 4.2:+32195534 | MS.gene065875:CDS |
CTTACATCATCAGGAACAGT+GGG | 0.627035 | 4.2:-32192481 | None:intergenic |
GAGTTTACTACCTTGCACTT+GGG | 0.627712 | 4.2:-32187655 | None:intergenic |
GGGCATCAAATCCCAAGCAA+TGG | 0.628535 | 4.2:+32195556 | MS.gene065875:CDS |
CCTAAAACCAGCAACCATGA+GGG | 0.630105 | 4.2:+32195535 | MS.gene065875:CDS |
CATACCAGCTCCCTGAACAA+TGG | 0.632892 | 4.2:-32194211 | None:intergenic |
TTAGCCGATCGACTTGTGGA+GGG | 0.636760 | 4.2:+32187538 | MS.gene065875:CDS |
CATCAATGAGATGTCTGTGG+TGG | 0.637086 | 4.2:+32188652 | MS.gene065875:CDS |
CAGACAAGAACCGTTGTCAG+TGG | 0.638105 | 4.2:+32195353 | MS.gene065875:CDS |
TACAATGCGATTTACATCTG+CGG | 0.638497 | 4.2:+32186153 | MS.gene065875:CDS |
TTACCAGAGATCTGAAGTGG+GGG | 0.638758 | 4.2:+32188744 | MS.gene065875:CDS |
CATTACCAGAGATCTGAAGT+GGG | 0.638794 | 4.2:+32188742 | MS.gene065875:CDS |
TAGATACCATGCTATTCACA+AGG | 0.643601 | 4.2:+32187191 | MS.gene065875:intron |
AGACCTCCTTGTGAATAGCA+TGG | 0.644341 | 4.2:-32187197 | None:intergenic |
CTTGACAAGTCCACTGACAA+CGG | 0.645824 | 4.2:-32195363 | None:intergenic |
ATGCCAGCTGATGTGGTCAG+TGG | 0.646227 | 4.2:-32196435 | None:intergenic |
GCAGAATCATACTCACACCC+TGG | 0.653453 | 4.2:-32187574 | None:intergenic |
CCGGCACTTACAAGATCCCA+GGG | 0.653556 | 4.2:-32194166 | None:intergenic |
TGTGAGTATGATTCTGCCAG+AGG | 0.653951 | 4.2:+32187580 | MS.gene065875:CDS |
CTAAAACCAGCAACCATGAG+GGG | 0.655884 | 4.2:+32195536 | MS.gene065875:CDS |
ATCAATGAGATGTCTGTGGT+GGG | 0.655945 | 4.2:+32188653 | MS.gene065875:CDS |
CGATGAGTATGGGACTGCAA+CGG | 0.660790 | 4.2:+32186179 | MS.gene065875:CDS |
ACAATCAGGTGTGTTGAGTG+CGG | 0.662342 | 4.2:+32186098 | MS.gene065875:intron |
CAATGAGCATATCTGGTGAG+GGG | 0.667194 | 4.2:+32193465 | MS.gene065875:CDS |
GAGGAACGTTGTTGACATAG+GGG | 0.668721 | 4.2:-32185932 | None:intergenic |
AACCAGAAATTACCATCACA+AGG | 0.669041 | 4.2:+32195240 | MS.gene065875:CDS |
CTTGCTAACAAATAGGCCTG+AGG | 0.671819 | 4.2:+32191970 | MS.gene065875:CDS |
ACTTACATCATCAGGAACAG+TGG | 0.673842 | 4.2:-32192482 | None:intergenic |
TTCGAAGAGTAAAGGCGTCG+GGG | 0.678180 | 4.2:+32191892 | MS.gene065875:CDS |
ATTACCAGAGATCTGAAGTG+GGG | 0.685797 | 4.2:+32188743 | MS.gene065875:CDS |
GGGGATCAGTGTGAGAACTG+TGG | 0.689601 | 4.2:+32187601 | MS.gene065875:CDS |
TATGTTGAAGAGATTGATGT+CGG | 0.692037 | 4.2:+32195323 | MS.gene065875:CDS |
TACCAGAGATCTGAAGTGGG+GGG | 0.699203 | 4.2:+32188745 | MS.gene065875:CDS |
GCACACTTCAGTTTGCTCAG+GGG | 0.701199 | 4.2:-32187265 | None:intergenic |
TTCCAATGCTGATCACACCA+TGG | 0.701218 | 4.2:+32195589 | MS.gene065875:CDS |
TGAGTATGATTCTGCCAGAG+GGG | 0.701606 | 4.2:+32187582 | MS.gene065875:CDS |
GCACACGAATGAGAAGCTAG+AGG | 0.715856 | 4.2:+32196395 | MS.gene065875:CDS |
GAGAAAGAATCACATTCCCG+GGG | 0.722304 | 4.2:+32196304 | MS.gene065875:CDS |
ATACATCAATGAGATGTCTG+TGG | 0.725592 | 4.2:+32188649 | MS.gene065875:CDS |
ATACCATGCTATTCACAAGG+AGG | 0.735757 | 4.2:+32187194 | MS.gene065875:CDS |
CCAACAAGAGCAGAACTGGG+CGG | 0.760494 | 4.2:-32196282 | None:intergenic |
TGGTCCGTATCACAAATACG+AGG | 0.816438 | 4.2:-32188584 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 32185861 | 32196497 | 32185861 | ID=MS.gene065875 |
chr4.2 | mRNA | 32185861 | 32196497 | 32185861 | ID=MS.gene065875.t1;Parent=MS.gene065875 |
chr4.2 | exon | 32185861 | 32185975 | 32185861 | ID=MS.gene065875.t1.exon1;Parent=MS.gene065875.t1 |
chr4.2 | CDS | 32185861 | 32185975 | 32185861 | ID=cds.MS.gene065875.t1;Parent=MS.gene065875.t1 |
chr4.2 | exon | 32186106 | 32186250 | 32186106 | ID=MS.gene065875.t1.exon2;Parent=MS.gene065875.t1 |
chr4.2 | CDS | 32186106 | 32186250 | 32186106 | ID=cds.MS.gene065875.t1;Parent=MS.gene065875.t1 |
chr4.2 | exon | 32187194 | 32187347 | 32187194 | ID=MS.gene065875.t1.exon3;Parent=MS.gene065875.t1 |
chr4.2 | CDS | 32187194 | 32187347 | 32187194 | ID=cds.MS.gene065875.t1;Parent=MS.gene065875.t1 |
chr4.2 | exon | 32187511 | 32187666 | 32187511 | ID=MS.gene065875.t1.exon4;Parent=MS.gene065875.t1 |
chr4.2 | CDS | 32187511 | 32187666 | 32187511 | ID=cds.MS.gene065875.t1;Parent=MS.gene065875.t1 |
chr4.2 | exon | 32188569 | 32188799 | 32188569 | ID=MS.gene065875.t1.exon5;Parent=MS.gene065875.t1 |
chr4.2 | CDS | 32188569 | 32188799 | 32188569 | ID=cds.MS.gene065875.t1;Parent=MS.gene065875.t1 |
chr4.2 | exon | 32188880 | 32189023 | 32188880 | ID=MS.gene065875.t1.exon6;Parent=MS.gene065875.t1 |
chr4.2 | CDS | 32188880 | 32189023 | 32188880 | ID=cds.MS.gene065875.t1;Parent=MS.gene065875.t1 |
chr4.2 | exon | 32191226 | 32191316 | 32191226 | ID=MS.gene065875.t1.exon7;Parent=MS.gene065875.t1 |
chr4.2 | CDS | 32191226 | 32191316 | 32191226 | ID=cds.MS.gene065875.t1;Parent=MS.gene065875.t1 |
chr4.2 | exon | 32191885 | 32191991 | 32191885 | ID=MS.gene065875.t1.exon8;Parent=MS.gene065875.t1 |
chr4.2 | CDS | 32191885 | 32191991 | 32191885 | ID=cds.MS.gene065875.t1;Parent=MS.gene065875.t1 |
chr4.2 | exon | 32192095 | 32192209 | 32192095 | ID=MS.gene065875.t1.exon9;Parent=MS.gene065875.t1 |
chr4.2 | CDS | 32192095 | 32192209 | 32192095 | ID=cds.MS.gene065875.t1;Parent=MS.gene065875.t1 |
chr4.2 | exon | 32192458 | 32192585 | 32192458 | ID=MS.gene065875.t1.exon10;Parent=MS.gene065875.t1 |
chr4.2 | CDS | 32192458 | 32192585 | 32192458 | ID=cds.MS.gene065875.t1;Parent=MS.gene065875.t1 |
chr4.2 | exon | 32193437 | 32193502 | 32193437 | ID=MS.gene065875.t1.exon11;Parent=MS.gene065875.t1 |
chr4.2 | CDS | 32193437 | 32193502 | 32193437 | ID=cds.MS.gene065875.t1;Parent=MS.gene065875.t1 |
chr4.2 | exon | 32193610 | 32193738 | 32193610 | ID=MS.gene065875.t1.exon12;Parent=MS.gene065875.t1 |
chr4.2 | CDS | 32193610 | 32193738 | 32193610 | ID=cds.MS.gene065875.t1;Parent=MS.gene065875.t1 |
chr4.2 | exon | 32194085 | 32194228 | 32194085 | ID=MS.gene065875.t1.exon13;Parent=MS.gene065875.t1 |
chr4.2 | CDS | 32194085 | 32194228 | 32194085 | ID=cds.MS.gene065875.t1;Parent=MS.gene065875.t1 |
chr4.2 | exon | 32194316 | 32194439 | 32194316 | ID=MS.gene065875.t1.exon14;Parent=MS.gene065875.t1 |
chr4.2 | CDS | 32194316 | 32194439 | 32194316 | ID=cds.MS.gene065875.t1;Parent=MS.gene065875.t1 |
chr4.2 | exon | 32195171 | 32195409 | 32195171 | ID=MS.gene065875.t1.exon15;Parent=MS.gene065875.t1 |
chr4.2 | CDS | 32195171 | 32195409 | 32195171 | ID=cds.MS.gene065875.t1;Parent=MS.gene065875.t1 |
chr4.2 | exon | 32195509 | 32195610 | 32195509 | ID=MS.gene065875.t1.exon16;Parent=MS.gene065875.t1 |
chr4.2 | CDS | 32195509 | 32195610 | 32195509 | ID=cds.MS.gene065875.t1;Parent=MS.gene065875.t1 |
chr4.2 | exon | 32196267 | 32196497 | 32196267 | ID=MS.gene065875.t1.exon17;Parent=MS.gene065875.t1 |
chr4.2 | CDS | 32196267 | 32196497 | 32196267 | ID=cds.MS.gene065875.t1;Parent=MS.gene065875.t1 |
Gene Sequence |
Protein sequence |