Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065875.t1 | XP_003607408.1 | 99 | 806 | 8 | 0 | 1 | 806 | 1 | 806 | 0.00E+00 | 1636.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065875.t1 | Q9ZTS1 | 75.5 | 800 | 189 | 3 | 8 | 806 | 8 | 801 | 0.0e+00 | 1275.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065875.t1 | G7JSP8 | 99.0 | 806 | 8 | 0 | 1 | 806 | 1 | 806 | 0.0e+00 | 1636.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050009 | MS.gene065875 | 0.811683 | 6.19E-51 | -1.69E-46 |
| MS.gene052373 | MS.gene065875 | 0.844031 | 9.72E-59 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065875.t1 | MTR_4g077700 | 99.007 | 806 | 8 | 0 | 1 | 806 | 1 | 806 | 0.0 | 1664 |
| MS.gene065875.t1 | MTR_4g122580 | 82.382 | 806 | 135 | 3 | 1 | 806 | 1 | 799 | 0.0 | 1369 |
| MS.gene065875.t1 | MTR_1g115295 | 26.974 | 608 | 350 | 22 | 19 | 598 | 59 | 600 | 3.92e-48 | 181 |
| MS.gene065875.t1 | MTR_3g093870 | 41.057 | 246 | 127 | 3 | 578 | 806 | 144 | 388 | 1.30e-44 | 166 |
| MS.gene065875.t1 | MTR_4g040350 | 47.619 | 168 | 74 | 2 | 648 | 805 | 93 | 256 | 2.43e-37 | 141 |
| MS.gene065875.t1 | MTR_4g122620 | 42.945 | 163 | 49 | 6 | 117 | 267 | 13 | 143 | 1.29e-28 | 114 |
| MS.gene065875.t1 | MTR_4g122620 | 64.615 | 65 | 11 | 1 | 349 | 413 | 142 | 194 | 2.77e-15 | 75.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065875.t1 | AT4G13780 | 74.349 | 807 | 196 | 6 | 1 | 806 | 1 | 797 | 0.0 | 1254 |
| MS.gene065875.t1 | AT2G40660 | 50.000 | 164 | 81 | 1 | 643 | 806 | 227 | 389 | 2.37e-43 | 162 |
| MS.gene065875.t1 | AT3G55400 | 26.576 | 587 | 336 | 20 | 13 | 576 | 67 | 581 | 1.91e-41 | 161 |
| MS.gene065875.t1 | AT3G55400 | 27.400 | 500 | 282 | 17 | 13 | 494 | 67 | 503 | 2.19e-37 | 148 |
| MS.gene065875.t1 | AT3G59980 | 46.746 | 169 | 82 | 2 | 644 | 805 | 105 | 272 | 3.71e-37 | 141 |
| MS.gene065875.t1 | AT5G02680 | 83.333 | 36 | 6 | 0 | 382 | 417 | 54 | 89 | 3.46e-11 | 62.0 |
Find 197 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTGGAGTTGTTTCAGTTTA+TGG | 0.110658 | 4.2:+32188975 | MS.gene065875:CDS |
| AATATAAGCTTTGATGAATT+TGG | 0.147482 | 4.2:+32187231 | MS.gene065875:CDS |
| AACAAATTCATGGTTCAAAA+TGG | 0.185409 | 4.2:+32188703 | MS.gene065875:CDS |
| GTCTCCCAAACTTTCTTCTT+TGG | 0.208381 | 4.2:-32196357 | None:intergenic |
| TTGCTCGATATTGTCGTCTT+AGG | 0.215733 | 4.2:+32186127 | MS.gene065875:CDS |
| AGTAAAGGCGTCGGGGTATT+TGG | 0.251715 | 4.2:+32191899 | MS.gene065875:CDS |
| TTGAAGAAAACTAAAGTTTC+AGG | 0.254594 | 4.2:+32194418 | MS.gene065875:CDS |
| ATTTCTTGAGCTCCCTCTTT+TGG | 0.255185 | 4.2:+32188610 | MS.gene065875:CDS |
| AGCCTTGTGATGGTAATTTC+TGG | 0.259177 | 4.2:-32195242 | None:intergenic |
| TGCTCGATATTGTCGTCTTA+GGG | 0.267863 | 4.2:+32186128 | MS.gene065875:CDS |
| GTAAGTGCCGGTCATAAAAT+TGG | 0.269958 | 4.2:+32194178 | MS.gene065875:CDS |
| TACTTGGAACTGGTCAAAAT+TGG | 0.283900 | 4.2:+32191245 | MS.gene065875:CDS |
| TTCTCCAACAAGAGCAGAAC+TGG | 0.292326 | 4.2:-32196286 | None:intergenic |
| GTGGAGTTGTTTCAGTTTAT+GGG | 0.293016 | 4.2:+32188976 | MS.gene065875:CDS |
| CAACAAAGTTGCTGCATATA+TGG | 0.295135 | 4.2:+32192537 | MS.gene065875:CDS |
| TGAATCCAAAGAAGAAAGTT+TGG | 0.297006 | 4.2:+32196352 | MS.gene065875:CDS |
| ATACTTGTCACAAATCTCTT+TGG | 0.301274 | 4.2:-32186232 | None:intergenic |
| CTTTCACTTTCTGATGATAA+AGG | 0.302687 | 4.2:+32194121 | MS.gene065875:CDS |
| AGACTGAAAGATGGCATAAA+AGG | 0.304480 | 4.2:-32193712 | None:intergenic |
| GTATCTTCTTGCTTGTTTGT+TGG | 0.305613 | 4.2:+32193687 | MS.gene065875:CDS |
| ACTAACCTGCTTCATAATTC+AGG | 0.306018 | 4.2:-32191300 | None:intergenic |
| CATATATGCAGCAACTTTGT+TGG | 0.315455 | 4.2:-32192536 | None:intergenic |
| TCATACTCACACCCTGGAAT+TGG | 0.326808 | 4.2:-32187568 | None:intergenic |
| TGCTTCATAATTCAGGTATT+CGG | 0.336714 | 4.2:-32191293 | None:intergenic |
| TTGATGCCCCTCATGGTTGC+TGG | 0.337669 | 4.2:-32195542 | None:intergenic |
| TTTGGATTCAAGAGTTCATC+TGG | 0.338301 | 4.2:-32196339 | None:intergenic |
| GAGGGTACCTGCCCAATTCC+AGG | 0.340471 | 4.2:+32187556 | MS.gene065875:CDS |
| CTAATATTCCGGTTGAAGTA+TGG | 0.343710 | 4.2:+32191939 | MS.gene065875:CDS |
| ATCTGCGGTACCGATGAGTA+TGG | 0.345827 | 4.2:+32186168 | MS.gene065875:CDS |
| CCGCCCAGTTCTGCTCTTGT+TGG | 0.347348 | 4.2:+32196282 | MS.gene065875:CDS |
| ATGAAGAAGTAGAAGTCTTC+AGG | 0.354632 | 4.2:+32194320 | MS.gene065875:CDS |
| GATATTACTTGCTAACAAAT+AGG | 0.360848 | 4.2:+32191963 | MS.gene065875:CDS |
| AAAATTGCAATGAGCATATC+TGG | 0.367625 | 4.2:+32193458 | MS.gene065875:CDS |
| TGGCACACTTCAGTTTGCTC+AGG | 0.367664 | 4.2:-32187267 | None:intergenic |
| CTTTGTAGGAAACTGAGTTT+TGG | 0.372999 | 4.2:+32193602 | MS.gene065875:intron |
| TCAATTCTGTCGGATTTAGA+AGG | 0.374112 | 4.2:-32187627 | None:intergenic |
| TGCAACTTATCTTCCAAAAG+AGG | 0.374210 | 4.2:-32188623 | None:intergenic |
| TACTTGTCACAAATCTCTTT+GGG | 0.375574 | 4.2:-32186231 | None:intergenic |
| ATCAGGAACAGTGGGAATAA+TGG | 0.381536 | 4.2:-32192473 | None:intergenic |
| TGAAACAACTCCACATTCTC+AGG | 0.383989 | 4.2:-32188967 | None:intergenic |
| ATTGGAAGGTGTTCTATGTT+TGG | 0.384669 | 4.2:+32188872 | MS.gene065875:intron |
| GAACACCAAAGCCATTGTTC+AGG | 0.386114 | 4.2:+32194200 | MS.gene065875:CDS |
| GCTAAACCAACCTGCAGGTT+TGG | 0.387299 | 4.2:-32192198 | None:intergenic |
| TGCAAAAGATACTAATATTC+CGG | 0.387319 | 4.2:+32191928 | MS.gene065875:CDS |
| CTATTCAAACAACAAATTCA+TGG | 0.387890 | 4.2:+32188693 | MS.gene065875:CDS |
| CCTCATCTCGGCAACATCAT+TGG | 0.412465 | 4.2:+32185951 | MS.gene065875:CDS |
| GCGCCGAAGCTTCCCGTTGA+AGG | 0.417667 | 4.2:+32185879 | MS.gene065875:CDS |
| TGAGGGGAATGCATATTTGC+AGG | 0.426344 | 4.2:+32193481 | MS.gene065875:CDS |
| GAATCCAAAGAAGAAAGTTT+GGG | 0.428068 | 4.2:+32196353 | MS.gene065875:CDS |
| CCAGTTCCAAGTAGAGTAGA+TGG | 0.428164 | 4.2:-32191235 | None:intergenic |
| ACAAATTCATGGTTCAAAAT+GGG | 0.429611 | 4.2:+32188704 | MS.gene065875:CDS |
| TAATATCTCCATACTTCAAC+CGG | 0.433672 | 4.2:-32191947 | None:intergenic |
| CATACTCACACCCTGGAATT+GGG | 0.434348 | 4.2:-32187567 | None:intergenic |
| CGGCAGGCTACACACGTGAT+TGG | 0.435417 | 4.2:+32188926 | MS.gene065875:CDS |
| TTTCCTTCAACGGGAAGCTT+CGG | 0.440888 | 4.2:-32185882 | None:intergenic |
| CCATCTACTCTACTTGGAAC+TGG | 0.441914 | 4.2:+32191235 | MS.gene065875:CDS |
| TTTCGAAGAGTAAAGGCGTC+GGG | 0.442818 | 4.2:+32191891 | MS.gene065875:CDS |
| TACCGAGCTTCTGAATAACT+TGG | 0.443002 | 4.2:+32192142 | MS.gene065875:CDS |
| TGGAGAAAGAATCACATTCC+CGG | 0.448358 | 4.2:+32196302 | MS.gene065875:CDS |
| TAACAAGGGAGCAGAGAGAT+TGG | 0.452678 | 4.2:-32193642 | None:intergenic |
| AGCTCCCTGAACAATGGCTT+TGG | 0.453002 | 4.2:-32194205 | None:intergenic |
| ATGTTTCCATCTACTCTACT+TGG | 0.469018 | 4.2:+32191229 | MS.gene065875:CDS |
| GTTGTTTCAGTTTATGGGAA+AGG | 0.471613 | 4.2:+32188981 | MS.gene065875:CDS |
| TTGAAGGAAGTCAAGCTGAC+AGG | 0.471653 | 4.2:+32194350 | MS.gene065875:CDS |
| AGCAGCAAGAACCATTGCTT+GGG | 0.478236 | 4.2:-32195567 | None:intergenic |
| AAAGCCATTGTTCAGGGAGC+TGG | 0.479693 | 4.2:+32194207 | MS.gene065875:CDS |
| TCCCAAGTTATTCAGAAGCT+CGG | 0.482067 | 4.2:-32192144 | None:intergenic |
| ACACACGTGATTGGGAGAAA+TGG | 0.483792 | 4.2:+32188935 | MS.gene065875:CDS |
| TGAGGAACGTTGTTGACATA+GGG | 0.485004 | 4.2:-32185933 | None:intergenic |
| GGCAGGCTACACACGTGATT+GGG | 0.487493 | 4.2:+32188927 | MS.gene065875:CDS |
| CCGTATCGTCCCATTGCCTA+TGG | 0.487513 | 4.2:-32196472 | None:intergenic |
| ATGAGGAACGTTGTTGACAT+AGG | 0.488800 | 4.2:-32185934 | None:intergenic |
| GGCACACTTCAGTTTGCTCA+GGG | 0.495259 | 4.2:-32187266 | None:intergenic |
| ACATACAGTGAATCTGCATC+AGG | 0.495378 | 4.2:-32195305 | None:intergenic |
| AGATGTCTGTGGTGGGATCA+TGG | 0.497749 | 4.2:+32188660 | MS.gene065875:CDS |
| AACACCAAAGCCATTGTTCA+GGG | 0.498027 | 4.2:+32194201 | MS.gene065875:CDS |
| TTGGGAATCTTCAATTCTGT+CGG | 0.499554 | 4.2:-32187637 | None:intergenic |
| AAGCAGCAAGAACCATTGCT+TGG | 0.500918 | 4.2:-32195568 | None:intergenic |
| ACGTTGCGCTTTCCTTCAAC+GGG | 0.501448 | 4.2:-32185891 | None:intergenic |
| ATCACATTCCCGGGGTATGA+AGG | 0.502161 | 4.2:+32196312 | MS.gene065875:CDS |
| GGAGAAAGAATCACATTCCC+GGG | 0.504503 | 4.2:+32196303 | MS.gene065875:CDS |
| TACCATGGTGTGATCAGCAT+TGG | 0.507261 | 4.2:-32195591 | None:intergenic |
| TATGCCATCTTTCAGTCTTG+AGG | 0.507830 | 4.2:+32193717 | MS.gene065875:CDS |
| GGAGCAATACATAGAGTCAA+TGG | 0.511638 | 4.2:+32192558 | MS.gene065875:CDS |
| TTGGGATTTGATGCCCCTCA+TGG | 0.513052 | 4.2:-32195549 | None:intergenic |
| GGAGTTTACTACCTTGCACT+TGG | 0.515669 | 4.2:-32187656 | None:intergenic |
| CCCTGGGATCTTGTAAGTGC+CGG | 0.516485 | 4.2:+32194166 | MS.gene065875:CDS |
| GCAACTTATCTTCCAAAAGA+GGG | 0.517389 | 4.2:-32188622 | None:intergenic |
| GTCTTCAGGAAGAAGTTTGA+AGG | 0.518322 | 4.2:+32194334 | MS.gene065875:CDS |
| CGGTTCCATCCATAGGCAAT+GGG | 0.521640 | 4.2:+32196463 | MS.gene065875:CDS |
| ATTTGCACGGTTCCATCCAT+AGG | 0.521790 | 4.2:+32196456 | MS.gene065875:CDS |
| CTTGTTATGAAAACTGCTGC+CGG | 0.522580 | 4.2:+32193658 | MS.gene065875:CDS |
| TATACCACTTGATGAAATGC+AGG | 0.523988 | 4.2:+32195388 | MS.gene065875:CDS |
| GACGTTGCGCTTTCCTTCAA+CGG | 0.527064 | 4.2:-32185892 | None:intergenic |
| TCTGGATTGCCTTCATACCC+CGG | 0.527809 | 4.2:-32196321 | None:intergenic |
| TGTGCACCTTTAGGTTGAGT+TGG | 0.528372 | 4.2:+32196254 | MS.gene065875:intron |
| GTTTGGTTTGATGCTCCGAT+TGG | 0.534698 | 4.2:+32188889 | MS.gene065875:CDS |
| CACATCAGCTGGCATTTGCA+CGG | 0.536466 | 4.2:+32196443 | MS.gene065875:CDS |
| ACAAGGCTTGATATTCGAGT+TGG | 0.537666 | 4.2:+32195257 | MS.gene065875:CDS |
| ATTCCACTGACCACATCAGC+TGG | 0.538255 | 4.2:+32196432 | MS.gene065875:CDS |
| TTGTTATGAAAACTGCTGCC+GGG | 0.539229 | 4.2:+32193659 | MS.gene065875:CDS |
| CTTAGCCGATCGACTTGTGG+AGG | 0.539801 | 4.2:+32187537 | MS.gene065875:CDS |
| GTCAACAACGTTCCTCATCT+CGG | 0.540137 | 4.2:+32185939 | MS.gene065875:CDS |
| GAGTCGCCACTTACATCATC+AGG | 0.542575 | 4.2:-32192490 | None:intergenic |
| ACCGGCACTTACAAGATCCC+AGG | 0.545961 | 4.2:-32194167 | None:intergenic |
| GTTCTTAGCCGATCGACTTG+TGG | 0.546717 | 4.2:+32187534 | MS.gene065875:CDS |
| TAGTCCTCGTATTTGTGATA+CGG | 0.547604 | 4.2:+32188580 | MS.gene065875:CDS |
| ATCGTCCCATTGCCTATGGA+TGG | 0.550835 | 4.2:-32196468 | None:intergenic |
| CTCTGAGGACACATTACAGC+AGG | 0.552010 | 4.2:+32187326 | MS.gene065875:CDS |
| TGAAGGAAGTCAAGCTGACA+GGG | 0.554340 | 4.2:+32194351 | MS.gene065875:CDS |
| GTGATTGATATATATCCAAT+CGG | 0.554368 | 4.2:-32188904 | None:intergenic |
| TCGAATATCAAGCCTTGTGA+TGG | 0.555943 | 4.2:-32195252 | None:intergenic |
| TCGAGTTGGTCTCATAAAGA+AGG | 0.557778 | 4.2:+32195271 | MS.gene065875:CDS |
| TGCAACGGAGACTAAAGCAT+TGG | 0.558923 | 4.2:+32186194 | MS.gene065875:CDS |
| TTTACTGCGATACATGCAAA+AGG | 0.559169 | 4.2:+32187512 | MS.gene065875:CDS |
| GTTCTCACACTGATCCCCTC+TGG | 0.559234 | 4.2:-32187596 | None:intergenic |
| CCAATGATGTTGCCGAGATG+AGG | 0.561565 | 4.2:-32185951 | None:intergenic |
| TCACCAAAATGACGGAAGAT+CGG | 0.561855 | 4.2:+32185853 | None:intergenic |
| CCATAGGCAATGGGACGATA+CGG | 0.562052 | 4.2:+32196472 | MS.gene065875:CDS |
| ACCGAGCTTCTGAATAACTT+GGG | 0.563182 | 4.2:+32192143 | MS.gene065875:CDS |
| CTGGATTGCCTTCATACCCC+GGG | 0.563744 | 4.2:-32196320 | None:intergenic |
| ACGGTTCCATCCATAGGCAA+TGG | 0.563965 | 4.2:+32196462 | MS.gene065875:CDS |
| CTCACACCCTGGAATTGGGC+AGG | 0.569388 | 4.2:-32187563 | None:intergenic |
| AGGGTACCTGCCCAATTCCA+GGG | 0.570926 | 4.2:+32187557 | MS.gene065875:CDS |
| CGTGCAAATGCCAGCTGATG+TGG | 0.574978 | 4.2:-32196442 | None:intergenic |
| TGACAGGGTTGTTCGTGCAG+AGG | 0.576831 | 4.2:+32194366 | MS.gene065875:CDS |
| GAAACAACTCCACATTCTCA+GGG | 0.577888 | 4.2:-32188966 | None:intergenic |
| GGATATATATCAATCACGGC+AGG | 0.586570 | 4.2:+32188910 | MS.gene065875:CDS |
| ATACATAGAGTCAATGGAGA+AGG | 0.586721 | 4.2:+32192564 | MS.gene065875:CDS |
| TGCAATGAGCATATCTGGTG+AGG | 0.586994 | 4.2:+32193463 | MS.gene065875:CDS |
| GCAATGAGCATATCTGGTGA+GGG | 0.587736 | 4.2:+32193464 | MS.gene065875:CDS |
| GCAGCAAAAGCATCATCAAG+TGG | 0.587775 | 4.2:+32195194 | MS.gene065875:CDS |
| CAAACCTGCATTTCATCAAG+TGG | 0.588160 | 4.2:-32195392 | None:intergenic |
| CGTTGCAGTCCCATACTCAT+CGG | 0.590342 | 4.2:-32186178 | None:intergenic |
| GCATTACCAGAGATCTGAAG+TGG | 0.591467 | 4.2:+32188741 | MS.gene065875:CDS |
| CACGTGATTGGGAGAAATGG+TGG | 0.593366 | 4.2:+32188938 | MS.gene065875:CDS |
| GTGAGTATGATTCTGCCAGA+GGG | 0.593875 | 4.2:+32187581 | MS.gene065875:CDS |
| GAATACCTGAATTATGAAGC+AGG | 0.594242 | 4.2:+32191295 | MS.gene065875:CDS |
| ATTACCTCAAGACTGAAAGA+TGG | 0.597613 | 4.2:-32193721 | None:intergenic |
| AGGGGAGAGCGCTAGTGATG+AGG | 0.598406 | 4.2:-32185914 | None:intergenic |
| TGGCAATAAAACTCAAAACT+CGG | 0.598920 | 4.2:-32192178 | None:intergenic |
| GGTACCCTCCACAAGTCGAT+CGG | 0.599711 | 4.2:-32187542 | None:intergenic |
| GCTCGATATTGTCGTCTTAG+GGG | 0.599763 | 4.2:+32186129 | MS.gene065875:CDS |
| TTCACAAGGAGGTCTACGAT+TGG | 0.599884 | 4.2:+32187205 | MS.gene065875:CDS |
| TCTCCAACAAGAGCAGAACT+GGG | 0.601244 | 4.2:-32196285 | None:intergenic |
| AGCAAGAAGATACACAATCC+CGG | 0.602614 | 4.2:-32193677 | None:intergenic |
| GAGGGAGCTCAAGAAATAAG+TGG | 0.603079 | 4.2:-32188604 | None:intergenic |
| GTAAAGGTTAAACTAAAGCA+AGG | 0.605462 | 4.2:+32193431 | MS.gene065875:intron |
| ACTGTTCCTGATGATGTAAG+TGG | 0.610282 | 4.2:+32192484 | MS.gene065875:CDS |
| CGAAAATAATTGGCTCTCTG+AGG | 0.610435 | 4.2:+32187311 | MS.gene065875:CDS |
| TCTGCGGTACCGATGAGTAT+GGG | 0.610606 | 4.2:+32186169 | MS.gene065875:CDS |
| GATTGGATATATATCAATCA+CGG | 0.614894 | 4.2:+32188906 | MS.gene065875:CDS |
| ATTGAAGATTCCCAAGTGCA+AGG | 0.615621 | 4.2:+32187645 | MS.gene065875:CDS |
| CAAGCAACTAAATTTGTCTG+TGG | 0.621913 | 4.2:+32194090 | MS.gene065875:CDS |
| TAATGACTTACAGTATGGAA+TGG | 0.623528 | 4.2:-32189012 | None:intergenic |
| ACCTAAAACCAGCAACCATG+AGG | 0.626255 | 4.2:+32195534 | MS.gene065875:CDS |
| CTTACATCATCAGGAACAGT+GGG | 0.627035 | 4.2:-32192481 | None:intergenic |
| GAGTTTACTACCTTGCACTT+GGG | 0.627712 | 4.2:-32187655 | None:intergenic |
| GGGCATCAAATCCCAAGCAA+TGG | 0.628535 | 4.2:+32195556 | MS.gene065875:CDS |
| CCTAAAACCAGCAACCATGA+GGG | 0.630105 | 4.2:+32195535 | MS.gene065875:CDS |
| CATACCAGCTCCCTGAACAA+TGG | 0.632892 | 4.2:-32194211 | None:intergenic |
| TTAGCCGATCGACTTGTGGA+GGG | 0.636760 | 4.2:+32187538 | MS.gene065875:CDS |
| CATCAATGAGATGTCTGTGG+TGG | 0.637086 | 4.2:+32188652 | MS.gene065875:CDS |
| CAGACAAGAACCGTTGTCAG+TGG | 0.638105 | 4.2:+32195353 | MS.gene065875:CDS |
| TACAATGCGATTTACATCTG+CGG | 0.638497 | 4.2:+32186153 | MS.gene065875:CDS |
| TTACCAGAGATCTGAAGTGG+GGG | 0.638758 | 4.2:+32188744 | MS.gene065875:CDS |
| CATTACCAGAGATCTGAAGT+GGG | 0.638794 | 4.2:+32188742 | MS.gene065875:CDS |
| TAGATACCATGCTATTCACA+AGG | 0.643601 | 4.2:+32187191 | MS.gene065875:intron |
| AGACCTCCTTGTGAATAGCA+TGG | 0.644341 | 4.2:-32187197 | None:intergenic |
| CTTGACAAGTCCACTGACAA+CGG | 0.645824 | 4.2:-32195363 | None:intergenic |
| ATGCCAGCTGATGTGGTCAG+TGG | 0.646227 | 4.2:-32196435 | None:intergenic |
| GCAGAATCATACTCACACCC+TGG | 0.653453 | 4.2:-32187574 | None:intergenic |
| CCGGCACTTACAAGATCCCA+GGG | 0.653556 | 4.2:-32194166 | None:intergenic |
| TGTGAGTATGATTCTGCCAG+AGG | 0.653951 | 4.2:+32187580 | MS.gene065875:CDS |
| CTAAAACCAGCAACCATGAG+GGG | 0.655884 | 4.2:+32195536 | MS.gene065875:CDS |
| ATCAATGAGATGTCTGTGGT+GGG | 0.655945 | 4.2:+32188653 | MS.gene065875:CDS |
| CGATGAGTATGGGACTGCAA+CGG | 0.660790 | 4.2:+32186179 | MS.gene065875:CDS |
| ACAATCAGGTGTGTTGAGTG+CGG | 0.662342 | 4.2:+32186098 | MS.gene065875:intron |
| CAATGAGCATATCTGGTGAG+GGG | 0.667194 | 4.2:+32193465 | MS.gene065875:CDS |
| GAGGAACGTTGTTGACATAG+GGG | 0.668721 | 4.2:-32185932 | None:intergenic |
| AACCAGAAATTACCATCACA+AGG | 0.669041 | 4.2:+32195240 | MS.gene065875:CDS |
| CTTGCTAACAAATAGGCCTG+AGG | 0.671819 | 4.2:+32191970 | MS.gene065875:CDS |
| ACTTACATCATCAGGAACAG+TGG | 0.673842 | 4.2:-32192482 | None:intergenic |
| TTCGAAGAGTAAAGGCGTCG+GGG | 0.678180 | 4.2:+32191892 | MS.gene065875:CDS |
| ATTACCAGAGATCTGAAGTG+GGG | 0.685797 | 4.2:+32188743 | MS.gene065875:CDS |
| GGGGATCAGTGTGAGAACTG+TGG | 0.689601 | 4.2:+32187601 | MS.gene065875:CDS |
| TATGTTGAAGAGATTGATGT+CGG | 0.692037 | 4.2:+32195323 | MS.gene065875:CDS |
| TACCAGAGATCTGAAGTGGG+GGG | 0.699203 | 4.2:+32188745 | MS.gene065875:CDS |
| GCACACTTCAGTTTGCTCAG+GGG | 0.701199 | 4.2:-32187265 | None:intergenic |
| TTCCAATGCTGATCACACCA+TGG | 0.701218 | 4.2:+32195589 | MS.gene065875:CDS |
| TGAGTATGATTCTGCCAGAG+GGG | 0.701606 | 4.2:+32187582 | MS.gene065875:CDS |
| GCACACGAATGAGAAGCTAG+AGG | 0.715856 | 4.2:+32196395 | MS.gene065875:CDS |
| GAGAAAGAATCACATTCCCG+GGG | 0.722304 | 4.2:+32196304 | MS.gene065875:CDS |
| ATACATCAATGAGATGTCTG+TGG | 0.725592 | 4.2:+32188649 | MS.gene065875:CDS |
| ATACCATGCTATTCACAAGG+AGG | 0.735757 | 4.2:+32187194 | MS.gene065875:CDS |
| CCAACAAGAGCAGAACTGGG+CGG | 0.760494 | 4.2:-32196282 | None:intergenic |
| TGGTCCGTATCACAAATACG+AGG | 0.816438 | 4.2:-32188584 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 32185861 | 32196497 | 32185861 | ID=MS.gene065875 |
| chr4.2 | mRNA | 32185861 | 32196497 | 32185861 | ID=MS.gene065875.t1;Parent=MS.gene065875 |
| chr4.2 | exon | 32185861 | 32185975 | 32185861 | ID=MS.gene065875.t1.exon1;Parent=MS.gene065875.t1 |
| chr4.2 | CDS | 32185861 | 32185975 | 32185861 | ID=cds.MS.gene065875.t1;Parent=MS.gene065875.t1 |
| chr4.2 | exon | 32186106 | 32186250 | 32186106 | ID=MS.gene065875.t1.exon2;Parent=MS.gene065875.t1 |
| chr4.2 | CDS | 32186106 | 32186250 | 32186106 | ID=cds.MS.gene065875.t1;Parent=MS.gene065875.t1 |
| chr4.2 | exon | 32187194 | 32187347 | 32187194 | ID=MS.gene065875.t1.exon3;Parent=MS.gene065875.t1 |
| chr4.2 | CDS | 32187194 | 32187347 | 32187194 | ID=cds.MS.gene065875.t1;Parent=MS.gene065875.t1 |
| chr4.2 | exon | 32187511 | 32187666 | 32187511 | ID=MS.gene065875.t1.exon4;Parent=MS.gene065875.t1 |
| chr4.2 | CDS | 32187511 | 32187666 | 32187511 | ID=cds.MS.gene065875.t1;Parent=MS.gene065875.t1 |
| chr4.2 | exon | 32188569 | 32188799 | 32188569 | ID=MS.gene065875.t1.exon5;Parent=MS.gene065875.t1 |
| chr4.2 | CDS | 32188569 | 32188799 | 32188569 | ID=cds.MS.gene065875.t1;Parent=MS.gene065875.t1 |
| chr4.2 | exon | 32188880 | 32189023 | 32188880 | ID=MS.gene065875.t1.exon6;Parent=MS.gene065875.t1 |
| chr4.2 | CDS | 32188880 | 32189023 | 32188880 | ID=cds.MS.gene065875.t1;Parent=MS.gene065875.t1 |
| chr4.2 | exon | 32191226 | 32191316 | 32191226 | ID=MS.gene065875.t1.exon7;Parent=MS.gene065875.t1 |
| chr4.2 | CDS | 32191226 | 32191316 | 32191226 | ID=cds.MS.gene065875.t1;Parent=MS.gene065875.t1 |
| chr4.2 | exon | 32191885 | 32191991 | 32191885 | ID=MS.gene065875.t1.exon8;Parent=MS.gene065875.t1 |
| chr4.2 | CDS | 32191885 | 32191991 | 32191885 | ID=cds.MS.gene065875.t1;Parent=MS.gene065875.t1 |
| chr4.2 | exon | 32192095 | 32192209 | 32192095 | ID=MS.gene065875.t1.exon9;Parent=MS.gene065875.t1 |
| chr4.2 | CDS | 32192095 | 32192209 | 32192095 | ID=cds.MS.gene065875.t1;Parent=MS.gene065875.t1 |
| chr4.2 | exon | 32192458 | 32192585 | 32192458 | ID=MS.gene065875.t1.exon10;Parent=MS.gene065875.t1 |
| chr4.2 | CDS | 32192458 | 32192585 | 32192458 | ID=cds.MS.gene065875.t1;Parent=MS.gene065875.t1 |
| chr4.2 | exon | 32193437 | 32193502 | 32193437 | ID=MS.gene065875.t1.exon11;Parent=MS.gene065875.t1 |
| chr4.2 | CDS | 32193437 | 32193502 | 32193437 | ID=cds.MS.gene065875.t1;Parent=MS.gene065875.t1 |
| chr4.2 | exon | 32193610 | 32193738 | 32193610 | ID=MS.gene065875.t1.exon12;Parent=MS.gene065875.t1 |
| chr4.2 | CDS | 32193610 | 32193738 | 32193610 | ID=cds.MS.gene065875.t1;Parent=MS.gene065875.t1 |
| chr4.2 | exon | 32194085 | 32194228 | 32194085 | ID=MS.gene065875.t1.exon13;Parent=MS.gene065875.t1 |
| chr4.2 | CDS | 32194085 | 32194228 | 32194085 | ID=cds.MS.gene065875.t1;Parent=MS.gene065875.t1 |
| chr4.2 | exon | 32194316 | 32194439 | 32194316 | ID=MS.gene065875.t1.exon14;Parent=MS.gene065875.t1 |
| chr4.2 | CDS | 32194316 | 32194439 | 32194316 | ID=cds.MS.gene065875.t1;Parent=MS.gene065875.t1 |
| chr4.2 | exon | 32195171 | 32195409 | 32195171 | ID=MS.gene065875.t1.exon15;Parent=MS.gene065875.t1 |
| chr4.2 | CDS | 32195171 | 32195409 | 32195171 | ID=cds.MS.gene065875.t1;Parent=MS.gene065875.t1 |
| chr4.2 | exon | 32195509 | 32195610 | 32195509 | ID=MS.gene065875.t1.exon16;Parent=MS.gene065875.t1 |
| chr4.2 | CDS | 32195509 | 32195610 | 32195509 | ID=cds.MS.gene065875.t1;Parent=MS.gene065875.t1 |
| chr4.2 | exon | 32196267 | 32196497 | 32196267 | ID=MS.gene065875.t1.exon17;Parent=MS.gene065875.t1 |
| chr4.2 | CDS | 32196267 | 32196497 | 32196267 | ID=cds.MS.gene065875.t1;Parent=MS.gene065875.t1 |
| Gene Sequence |
| Protein sequence |