Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80766.t1 | XP_003609799.2 | 87.2 | 795 | 96 | 4 | 1 | 790 | 1 | 794 | 0.00E+00 | 1425.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80766.t1 | Q9SVN5 | 70.7 | 803 | 220 | 6 | 1 | 795 | 1 | 796 | 0.0e+00 | 1166.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80766.t1 | G7JNY9 | 87.2 | 795 | 96 | 4 | 1 | 790 | 1 | 794 | 0.0e+00 | 1425.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80766.t1 | MTR_4g122580 | 87.799 | 795 | 91 | 4 | 1 | 790 | 1 | 794 | 0.0 | 1412 |
| MS.gene80766.t1 | MTR_4g077700 | 80.521 | 806 | 145 | 5 | 1 | 795 | 1 | 805 | 0.0 | 1335 |
| MS.gene80766.t1 | MTR_1g115295 | 26.298 | 578 | 347 | 16 | 20 | 580 | 59 | 574 | 1.20e-49 | 185 |
| MS.gene80766.t1 | MTR_3g093870 | 47.853 | 163 | 84 | 1 | 631 | 792 | 223 | 385 | 1.84e-41 | 156 |
| MS.gene80766.t1 | MTR_4g040350 | 45.342 | 161 | 71 | 5 | 639 | 786 | 93 | 249 | 2.02e-32 | 127 |
| MS.gene80766.t1 | MTR_4g122620 | 44.720 | 161 | 41 | 6 | 118 | 264 | 13 | 139 | 2.90e-26 | 107 |
| MS.gene80766.t1 | MTR_4g122620 | 64.615 | 65 | 11 | 1 | 348 | 412 | 142 | 194 | 7.38e-15 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80766.t1 | AT4G13780 | 70.984 | 803 | 218 | 6 | 1 | 795 | 1 | 796 | 0.0 | 1184 |
| MS.gene80766.t1 | AT3G55400 | 25.967 | 543 | 337 | 14 | 13 | 542 | 65 | 555 | 6.13e-43 | 166 |
| MS.gene80766.t1 | AT2G40660 | 48.718 | 156 | 79 | 1 | 634 | 788 | 227 | 382 | 4.98e-41 | 155 |
| MS.gene80766.t1 | AT3G55400 | 26.680 | 491 | 298 | 13 | 13 | 493 | 65 | 503 | 1.83e-40 | 157 |
| MS.gene80766.t1 | AT3G59980 | 42.941 | 170 | 88 | 3 | 635 | 796 | 105 | 273 | 1.31e-31 | 125 |
Find 184 sgRNAs with CRISPR-Local
Find 412 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTGGAGCTGTTTCAGTTTA+TGG | 0.120529 | 4.4:+80321920 | MS.gene80766:CDS |
| ATATCTTCTTGCTTGTTTAT+TGG | 0.183124 | 4.4:+80324452 | MS.gene80766:CDS |
| TAGTGAGTTGCTGAATAATT+TGG | 0.188892 | 4.4:+80323049 | MS.gene80766:CDS |
| GACATAAGCTTTGATAAATT+TGG | 0.203603 | 4.4:+80321089 | MS.gene80766:CDS |
| TACTCGGAACCGGTGAAAAT+TGG | 0.234882 | 4.4:+80322373 | MS.gene80766:CDS |
| CAATCACCAGGCTTGATATT+CGG | 0.254661 | 4.4:+80325619 | MS.gene80766:CDS |
| AGTGATGGCATCGGGGTATT+TGG | 0.259550 | 4.4:+80322809 | MS.gene80766:CDS |
| CCTTCAATTCGGTTGGATTA+AGG | 0.264628 | 4.4:-80321422 | None:intergenic |
| TTGAGGTTTGTCTACGTTAT+TGG | 0.264743 | 4.4:-80326351 | None:intergenic |
| CTTTGTAGGAAACCGCATTT+TGG | 0.265748 | 4.4:+80324367 | MS.gene80766:intron |
| CCCTCATGGCTGCTGGCTTT+AGG | 0.265798 | 4.4:-80325917 | None:intergenic |
| ATACTTGTCAGCAATTTCTT+TGG | 0.273146 | 4.4:-80320930 | None:intergenic |
| TTGAAGAAAACAAAAGTTTC+AGG | 0.277655 | 4.4:+80324930 | MS.gene80766:CDS |
| CCCTCTGTTGAAAGATGAAT+TGG | 0.298795 | 4.4:+80321653 | MS.gene80766:CDS |
| GTGGAGCTGTTTCAGTTTAT+GGG | 0.302887 | 4.4:+80321921 | MS.gene80766:CDS |
| TTCTCCAACAGAAGCAGAAC+TGG | 0.310805 | 4.4:-80326154 | None:intergenic |
| CCACGACCCAACGAGAAAAT+TGG | 0.311297 | 4.4:+80323346 | MS.gene80766:CDS |
| TTGATAGACTAAGGAAACTA+TGG | 0.313437 | 4.4:+80324667 | MS.gene80766:CDS |
| TGAAACAGCTCCACATTATC+TGG | 0.314170 | 4.4:-80321912 | None:intergenic |
| ATGATTGAAAATCGGAAAAC+AGG | 0.316274 | 4.4:+80320552 | MS.gene80766:CDS |
| CTTAGTGATGGTCATAAAAT+CGG | 0.319310 | 4.4:+80324696 | MS.gene80766:CDS |
| GTCTGGTTCGATGCGCCTAT+TGG | 0.328453 | 4.4:+80321834 | MS.gene80766:CDS |
| AGTGAGTTGCTGAATAATTT+GGG | 0.333053 | 4.4:+80323050 | MS.gene80766:CDS |
| CTAATATTCCAGTTGAAGTA+TGG | 0.339737 | 4.4:+80322849 | MS.gene80766:CDS |
| TACCTTGGTGTGATCATCAT+TGG | 0.353414 | 4.4:-80325973 | None:intergenic |
| CGATAAAGTTGCTGCTTACT+TGG | 0.358851 | 4.4:+80323370 | MS.gene80766:CDS |
| TCCAGGGCTCTCGTTACAAT+TGG | 0.362244 | 4.4:-80320893 | None:intergenic |
| TACTTGTCAGCAATTTCTTT+GGG | 0.362499 | 4.4:-80320929 | None:intergenic |
| AATCACCAGGCTTGATATTC+GGG | 0.370194 | 4.4:+80325620 | MS.gene80766:CDS |
| GCTCAACCAACCTTCGGGTT+TGG | 0.371534 | 4.4:-80323105 | None:intergenic |
| AGAGTGAACGATGGCATAAA+AGG | 0.373450 | 4.4:-80324477 | None:intergenic |
| TAATATCTCCATACTTCAAC+TGG | 0.376134 | 4.4:-80322857 | None:intergenic |
| TATTGGATACATTTCGATTA+CGG | 0.377342 | 4.4:+80321851 | MS.gene80766:CDS |
| CAAGTAAGCAGCAACTTTAT+CGG | 0.385878 | 4.4:-80323369 | None:intergenic |
| CCTCATCTCGGCAACATCAT+TGG | 0.388359 | 4.4:+80320645 | MS.gene80766:CDS |
| GGAGAAAGAATTACATTCAA+TGG | 0.389509 | 4.4:+80326171 | MS.gene80766:CDS |
| CTCGGATCCTTCAATTCGGT+TGG | 0.395245 | 4.4:-80321429 | None:intergenic |
| CGGCTTGCTACACACATGAT+TGG | 0.398464 | 4.4:+80321871 | MS.gene80766:CDS |
| TGATTCATACTTCAAGTATT+CGG | 0.399475 | 4.4:-80322421 | None:intergenic |
| AGATGTCTGTGGTCGGTTCA+TGG | 0.403462 | 4.4:+80321691 | MS.gene80766:CDS |
| GATATTACTTGCTCATAAAC+AGG | 0.411975 | 4.4:+80322873 | MS.gene80766:CDS |
| GGACACCCAAGCTATTGTTC+AGG | 0.412186 | 4.4:+80324718 | MS.gene80766:CDS |
| AAAAGATATTTGATAACAAA+TGG | 0.412391 | 4.4:+80321159 | MS.gene80766:CDS |
| TGCTCGTTACTGCCGACTAA+GGG | 0.413780 | 4.4:+80320826 | MS.gene80766:CDS |
| CCTTAATCCAACCGAATTGA+AGG | 0.422558 | 4.4:+80321422 | MS.gene80766:CDS |
| TTAATTCCCCTCATGGCTGC+TGG | 0.422636 | 4.4:-80325924 | None:intergenic |
| TTTCTAAGAGTGATGGCATC+GGG | 0.423509 | 4.4:+80322801 | MS.gene80766:CDS |
| TTGCTCGTTACTGCCGACTA+AGG | 0.424707 | 4.4:+80320825 | MS.gene80766:CDS |
| TTTGGGTTTAAGAGTTCGTC+GGG | 0.428688 | 4.4:-80326207 | None:intergenic |
| TGAGGGGAATGCATATTTGC+AGG | 0.430832 | 4.4:+80324213 | MS.gene80766:CDS |
| TTGTCACTTTCATGTGGAAC+GGG | 0.433499 | 4.4:-80321801 | None:intergenic |
| AATCCATAATGATTGAAAAT+CGG | 0.435381 | 4.4:+80320544 | None:intergenic |
| CTAACCTGCATTTCATCAAC+TGG | 0.443360 | 4.4:-80325759 | None:intergenic |
| CTTTCACTTTCTGATGATAA+CGG | 0.452489 | 4.4:+80324639 | MS.gene80766:CDS |
| CACTTCAGCTGGTGTTTGCA+AGG | 0.453730 | 4.4:+80326308 | MS.gene80766:CDS |
| AAAATTGCAATGAGTATATC+GGG | 0.459339 | 4.4:+80324190 | MS.gene80766:CDS |
| ATCAGGAACAGTTGGAATAG+TGG | 0.462472 | 4.4:-80323306 | None:intergenic |
| ATTACATTCAATGGATATGA+AGG | 0.467263 | 4.4:+80326180 | MS.gene80766:CDS |
| GGCTTGCTACACACATGATT+GGG | 0.470456 | 4.4:+80321872 | MS.gene80766:CDS |
| CAAGCTATTGTTCAGGGAGC+TGG | 0.471484 | 4.4:+80324725 | MS.gene80766:CDS |
| AGCTCCCTGAACAATAGCTT+GGG | 0.471729 | 4.4:-80324723 | None:intergenic |
| GAATACTTGAAGTATGAATC+AGG | 0.478484 | 4.4:+80322423 | MS.gene80766:CDS |
| GCACCTCGGATCCTTCAATT+CGG | 0.481243 | 4.4:-80321433 | None:intergenic |
| CCAATTCATCTTTCAACAGA+GGG | 0.483994 | 4.4:-80321653 | None:intergenic |
| CAAGGTACATGTCCAACTCC+TGG | 0.484148 | 4.4:+80321348 | MS.gene80766:CDS |
| CCACCCAGTTCTGCTTCTGT+TGG | 0.485237 | 4.4:+80326150 | MS.gene80766:CDS |
| CAGCTCCCTGAACAATAGCT+TGG | 0.487366 | 4.4:-80324724 | None:intergenic |
| GTAATCGAAATGTATCCAAT+AGG | 0.488264 | 4.4:-80321849 | None:intergenic |
| TAGATACCATGCTATTCATA+AGG | 0.491523 | 4.4:+80321049 | MS.gene80766:intron |
| CCGGTTCCGAGTAGAGTAGA+TGG | 0.491948 | 4.4:-80322363 | None:intergenic |
| CTCCGAGAGTACAGTGGAGC+AGG | 0.495849 | 4.4:+80321184 | MS.gene80766:CDS |
| ACACACATGATTGGGAGAAA+TGG | 0.495995 | 4.4:+80321880 | MS.gene80766:CDS |
| TGAGGTACGTTGTTGACATA+AGG | 0.498260 | 4.4:-80320627 | None:intergenic |
| TTGCACCCTTTAGGTTGAGT+TGG | 0.499855 | 4.4:+80326122 | MS.gene80766:intron |
| TTCATAAGGAGGTCTATGAT+TGG | 0.501256 | 4.4:+80321063 | MS.gene80766:CDS |
| CCATCTACTCTACTCGGAAC+CGG | 0.502934 | 4.4:+80322363 | MS.gene80766:CDS |
| TTTGCTCGAGGGAAGAGGTC+CGG | 0.503447 | 4.4:-80321112 | None:intergenic |
| GAGTCAGCGGTTACATCATC+AGG | 0.503713 | 4.4:-80323323 | None:intergenic |
| TGCAAAGTACACAGACCCTT+CGG | 0.505740 | 4.4:-80325893 | None:intergenic |
| TCCAATTCATCTTTCAACAG+AGG | 0.505834 | 4.4:-80321654 | None:intergenic |
| GTCTGTGGTACTGATGAGTA+TGG | 0.506835 | 4.4:+80320866 | MS.gene80766:CDS |
| GATGTTGCGTTTACCTTCCA+CGG | 0.507205 | 4.4:-80320586 | None:intergenic |
| TTCAGTTTGCTCGAGGGAAG+AGG | 0.507964 | 4.4:-80321117 | None:intergenic |
| TTGAGATTTAATTCCCCTCA+TGG | 0.508343 | 4.4:-80325931 | None:intergenic |
| GCTGTTTCAGTTTATGGGAA+AGG | 0.510642 | 4.4:+80321926 | MS.gene80766:CDS |
| GGCAAATTTCAGTTTGCTCG+AGG | 0.519920 | 4.4:-80321124 | None:intergenic |
| TGCAATGAGTATATCGGGTG+AGG | 0.522766 | 4.4:+80324195 | MS.gene80766:CDS |
| ACGGTGATGTTGATAGACTA+AGG | 0.523736 | 4.4:+80324658 | MS.gene80766:CDS |
| GTGGTCTGTATCACGAAGAC+GGG | 0.524977 | 4.4:-80321616 | None:intergenic |
| CACCTGCTCCACTGTACTCT+CGG | 0.525612 | 4.4:-80321186 | None:intergenic |
| TATGTTGAAGAGATTGATGT+TGG | 0.527777 | 4.4:+80325690 | MS.gene80766:CDS |
| TATGCCATCGTTCACTCTTG+AGG | 0.528010 | 4.4:+80324482 | MS.gene80766:CDS |
| TCCATCTCTGAGTCGTGCAT+TGG | 0.532976 | 4.4:-80321736 | None:intergenic |
| CCTAAAGCCAGCAGCCATGA+GGG | 0.538601 | 4.4:+80325917 | MS.gene80766:CDS |
| ACATACAAGGACTCCGCACT+AGG | 0.539535 | 4.4:-80325672 | None:intergenic |
| GACACCCAAGCTATTGTTCA+GGG | 0.540465 | 4.4:+80324719 | MS.gene80766:CDS |
| TTATGCGACCGGCTTGTACA+AGG | 0.541909 | 4.4:+80321330 | MS.gene80766:CDS |
| TATACCAGTTGATGAAATGC+AGG | 0.542578 | 4.4:+80325755 | MS.gene80766:CDS |
| CTTGTCACTTTCATGTGGAA+CGG | 0.543976 | 4.4:-80321802 | None:intergenic |
| TTAGTGATGGTCATAAAATC+GGG | 0.545228 | 4.4:+80324697 | MS.gene80766:CDS |
| ATTCCACTCAACACTTCAGC+TGG | 0.548011 | 4.4:+80326297 | MS.gene80766:CDS |
| CATGTCACACTGATCTCCTC+GGG | 0.548705 | 4.4:-80321388 | None:intergenic |
| ATGACAAGGGAGCAGAGAGA+GGG | 0.551026 | 4.4:-80324408 | None:intergenic |
| ACATGTCACACTGATCTCCT+CGG | 0.556092 | 4.4:-80321389 | None:intergenic |
| CGTTCCACATGAAAGTGACA+AGG | 0.556783 | 4.4:+80321803 | MS.gene80766:CDS |
| GTTACATCATCAGGAACAGT+TGG | 0.559570 | 4.4:-80323314 | None:intergenic |
| ACCAACCCGAATATCAAGCC+TGG | 0.561924 | 4.4:-80325625 | None:intergenic |
| ACCAGGCTTGATATTCGGGT+TGG | 0.562618 | 4.4:+80325624 | MS.gene80766:CDS |
| GGGAATTAAATCTCAAGCAA+TGG | 0.563664 | 4.4:+80325938 | MS.gene80766:CDS |
| TCGATCTGCACATTAACAAA+GGG | 0.563888 | 4.4:+80326256 | MS.gene80766:CDS |
| TCCAATTGTAACGAGAGCCC+TGG | 0.565739 | 4.4:+80320892 | MS.gene80766:CDS |
| ATCAATCTCTTCAACATACA+AGG | 0.568570 | 4.4:-80325685 | None:intergenic |
| GTGAAGGTTAAATTAAAGCA+AGG | 0.570351 | 4.4:+80324163 | MS.gene80766:intron |
| ACCAATGCACGACTCAGAGA+TGG | 0.572821 | 4.4:+80321735 | MS.gene80766:CDS |
| CACATGATTGGGAGAAATGG+TGG | 0.573031 | 4.4:+80321883 | MS.gene80766:CDS |
| CCAATGATGTTGCCGAGATG+AGG | 0.574772 | 4.4:-80320645 | None:intergenic |
| ACAACTTTCTTCAGAACCGA+AGG | 0.579211 | 4.4:+80325877 | MS.gene80766:intron |
| GCAAATTTCAGTTTGCTCGA+GGG | 0.581022 | 4.4:-80321123 | None:intergenic |
| GTCGATCTGCACATTAACAA+AGG | 0.583027 | 4.4:+80326255 | MS.gene80766:CDS |
| TATGACAAGGGAGCAGAGAG+AGG | 0.584728 | 4.4:-80324409 | None:intergenic |
| AAGGTACATGTCCAACTCCT+GGG | 0.586057 | 4.4:+80321349 | MS.gene80766:CDS |
| GTCAACAACGTACCTCATCT+CGG | 0.586439 | 4.4:+80320633 | MS.gene80766:CDS |
| CGTTGGGTCGTGGGAGTCAG+CGG | 0.586752 | 4.4:-80323336 | None:intergenic |
| GCAATGAGTATATCGGGTGA+GGG | 0.587736 | 4.4:+80324196 | MS.gene80766:CDS |
| GGGAAGGTTCTTCCCGTGGA+AGG | 0.589823 | 4.4:+80320573 | MS.gene80766:CDS |
| TCTCCAACAGAAGCAGAACT+GGG | 0.592875 | 4.4:-80326153 | None:intergenic |
| GCAGCTAAATTTGTCTGCGG+AGG | 0.595933 | 4.4:+80324611 | MS.gene80766:CDS |
| AAGGTAGAGCACTCGTGATG+AGG | 0.595967 | 4.4:-80320608 | None:intergenic |
| AGACATTATAACCCCTTAGT+CGG | 0.596960 | 4.4:-80320838 | None:intergenic |
| CTATGGGATATCCTTAGTGA+TGG | 0.599587 | 4.4:+80324684 | MS.gene80766:CDS |
| AGTGGTCTGTATCACGAAGA+CGG | 0.599599 | 4.4:-80321617 | None:intergenic |
| TAAGCTTTGATAAATTTGGC+CGG | 0.599965 | 4.4:+80321093 | MS.gene80766:CDS |
| ATATTTCCATCTACTCTACT+CGG | 0.600505 | 4.4:+80322357 | MS.gene80766:CDS |
| CTTGTAAAGGCGCCAAAATG+CGG | 0.602955 | 4.4:-80324379 | None:intergenic |
| GCATTACCAGAGATATGAAG+TGG | 0.603007 | 4.4:+80321772 | MS.gene80766:CDS |
| TGATAGACTAAGGAAACTAT+GGG | 0.607107 | 4.4:+80324668 | MS.gene80766:CDS |
| TGATTGAAAATCGGAAAACA+GGG | 0.609473 | 4.4:+80320553 | MS.gene80766:CDS |
| AAAACCTTGTCACTTTCATG+TGG | 0.613541 | 4.4:-80321807 | None:intergenic |
| TATAATGTCTTATACGTCTG+TGG | 0.613665 | 4.4:+80320851 | MS.gene80766:CDS |
| TGACAAGGGAGCAGAGAGAG+GGG | 0.619959 | 4.4:-80324407 | None:intergenic |
| ACCTAAAGCCAGCAGCCATG+AGG | 0.621221 | 4.4:+80325916 | MS.gene80766:CDS |
| GGAGCAATACATAGAAGCAA+TGG | 0.622378 | 4.4:+80323391 | MS.gene80766:CDS |
| ATACATAGAAGCAATGGAGA+AGG | 0.623970 | 4.4:+80323397 | MS.gene80766:CDS |
| TGATAGAATTATACGTGCAG+AGG | 0.624349 | 4.4:+80324881 | MS.gene80766:CDS |
| TAAGCAGCTAAATTTGTCTG+CGG | 0.625658 | 4.4:+80324608 | MS.gene80766:CDS |
| GCTCGTTACTGCCGACTAAG+GGG | 0.627869 | 4.4:+80320827 | MS.gene80766:CDS |
| GGTTGAAAAGCATCCTAGTG+CGG | 0.630435 | 4.4:+80325659 | MS.gene80766:CDS |
| ATGTTGCGTTTACCTTCCAC+GGG | 0.630487 | 4.4:-80320585 | None:intergenic |
| AGACCTCCTTATGAATAGCA+TGG | 0.630962 | 4.4:-80321055 | None:intergenic |
| ATACCATGCTATTCATAAGG+AGG | 0.633397 | 4.4:+80321052 | MS.gene80766:CDS |
| ATTGAAGGATCCGAGGTGCA+AGG | 0.633475 | 4.4:+80321437 | MS.gene80766:CDS |
| TGAAAATCGGAAAACAGGGA+AGG | 0.634637 | 4.4:+80320557 | MS.gene80766:CDS |
| CAACTTTCTTCAGAACCGAA+GGG | 0.635526 | 4.4:+80325878 | MS.gene80766:intron |
| AACAGGGAAGGTTCTTCCCG+TGG | 0.636673 | 4.4:+80320569 | MS.gene80766:CDS |
| GACATGTACCTTGTACAAGC+CGG | 0.637777 | 4.4:-80321338 | None:intergenic |
| TGGTCTGTATCACGAAGACG+GGG | 0.637877 | 4.4:-80321615 | None:intergenic |
| ACACCAGCTGAAGTGTTGAG+TGG | 0.642553 | 4.4:-80326300 | None:intergenic |
| CATTACCAGAGATATGAAGT+GGG | 0.644644 | 4.4:+80321773 | MS.gene80766:CDS |
| ATCAACAAGATGTCTGTGGT+CGG | 0.645151 | 4.4:+80321684 | MS.gene80766:CDS |
| CAATGAGTATATCGGGTGAG+GGG | 0.651518 | 4.4:+80324197 | MS.gene80766:CDS |
| CTAAAGCCAGCAGCCATGAG+GGG | 0.651643 | 4.4:+80325918 | MS.gene80766:CDS |
| TTACCAGAGATATGAAGTGG+GGG | 0.653957 | 4.4:+80321775 | MS.gene80766:CDS |
| AACAAGATATTACAATCACC+AGG | 0.654759 | 4.4:+80325607 | MS.gene80766:CDS |
| GGAGATCAGTGTGACATGTG+CGG | 0.656916 | 4.4:+80321393 | MS.gene80766:CDS |
| CAGACAAGAACTGTTGTCAG+TGG | 0.658397 | 4.4:+80325720 | MS.gene80766:CDS |
| CAACCGAATTGAAGGATCCG+AGG | 0.660626 | 4.4:+80321430 | MS.gene80766:CDS |
| TTTATTGTGATACATGCGCA+AGG | 0.662697 | 4.4:+80321304 | MS.gene80766:CDS |
| TGTGAAAACAATTCTGCCCG+AGG | 0.670562 | 4.4:+80321372 | MS.gene80766:CDS |
| ATACATCAACAAGATGTCTG+TGG | 0.675438 | 4.4:+80321680 | MS.gene80766:CDS |
| AAGGTTTCGTCAATACGTTG+TGG | 0.682814 | 4.4:+80326327 | MS.gene80766:CDS |
| ATTACCAGAGATATGAAGTG+GGG | 0.683501 | 4.4:+80321774 | MS.gene80766:CDS |
| ATGGCTCTCCGAGAGTACAG+TGG | 0.684208 | 4.4:+80321178 | MS.gene80766:CDS |
| GACTCAGAGATGGATTAGAA+CGG | 0.689500 | 4.4:+80321745 | MS.gene80766:CDS |
| TTCTAAGAGTGATGGCATCG+GGG | 0.694863 | 4.4:+80322802 | MS.gene80766:CDS |
| TATCAGATACAGACTTCACA+TGG | 0.696319 | 4.4:+80323003 | MS.gene80766:CDS |
| TACCAGAGATATGAAGTGGG+GGG | 0.699203 | 4.4:+80321776 | MS.gene80766:CDS |
| GTGGTTACTACCTTGCACCT+CGG | 0.700716 | 4.4:-80321447 | None:intergenic |
| CTTGCTCATAAACAGGCCCG+AGG | 0.723442 | 4.4:+80322880 | MS.gene80766:CDS |
| TTCCAATGATGATCACACCA+AGG | 0.729208 | 4.4:+80325971 | MS.gene80766:CDS |
| CTTACCTCAAGAGTGAACGA+TGG | 0.736356 | 4.4:-80324486 | None:intergenic |
| CCAACAGAAGCAGAACTGGG+TGG | 0.743587 | 4.4:-80326150 | None:intergenic |
| GCAGTAACGAGCAAACACAT+CGG | 0.747284 | 4.4:-80320816 | None:intergenic |
| TTGGGTTTAAGAGTTCGTCG+GGG | 0.766453 | 4.4:-80326206 | None:intergenic |
| GGTCTGTATCACGAAGACGG+GGG | 0.798116 | 4.4:-80321614 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAATTTTGTTACTTTAAAA+TGG | - | chr4.4:80322759-80322778 | None:intergenic | 10.0% |
| !!! | TTTACATTTTTTTTTTTTGT+TGG | + | chr4.4:80321490-80321509 | MS.gene80766:intron | 10.0% |
| !! | ATTAAAACAAAAATAGAGAA+TGG | - | chr4.4:80324257-80324276 | None:intergenic | 15.0% |
| !! | ATTTATAAATATCAAAAACG+TGG | + | chr4.4:80325159-80325178 | MS.gene80766:intron | 15.0% |
| !! | TTAAATTATTAATTGATCAG+TGG | - | chr4.4:80325852-80325871 | None:intergenic | 15.0% |
| !!! | AAAAGATATTTGATAACAAA+TGG | + | chr4.4:80321159-80321178 | MS.gene80766:CDS | 15.0% |
| !!! | AAGATTTAAAACATAGAAAT+TGG | - | chr4.4:80322208-80322227 | None:intergenic | 15.0% |
| !!! | AATTTTTGTTTTTTTTTACC+AGG | + | chr4.4:80320782-80320801 | MS.gene80766:intron | 15.0% |
| !!! | ATAAGAAAACAAATCTATTT+TGG | + | chr4.4:80323527-80323546 | MS.gene80766:intron | 15.0% |
| !!! | ATGTATTTTTACAATTTGTT+TGG | + | chr4.4:80321535-80321554 | MS.gene80766:intron | 15.0% |
| !!! | TGTATTTTTACAATTTGTTT+GGG | + | chr4.4:80321536-80321555 | MS.gene80766:intron | 15.0% |
| !!! | TGTCTTTTTTTTTATTTCTT+TGG | + | chr4.4:80321215-80321234 | MS.gene80766:intron | 15.0% |
| !!! | TTAAGATCTTATTTTAAGAT+AGG | + | chr4.4:80324018-80324037 | MS.gene80766:intron | 15.0% |
| !!! | TTTTTTTTCGTTTTTGTAAT+GGG | + | chr4.4:80325299-80325318 | MS.gene80766:intron | 15.0% |
| !!! | TTTTTTTTTCGTTTTTGTAA+TGG | + | chr4.4:80325298-80325317 | MS.gene80766:intron | 15.0% |
| !! | AAAAATTGCAATGAGTATAT+CGG | + | chr4.4:80324189-80324208 | MS.gene80766:CDS | 20.0% |
| !! | AAATTCTATTTAGAAATGGA+TGG | - | chr4.4:80324967-80324986 | None:intergenic | 20.0% |
| !! | AATTTACGTAAGTGATTTAT+AGG | + | chr4.4:80322773-80322792 | MS.gene80766:intron | 20.0% |
| !! | AGTGATTATAAACTTATTTC+AGG | - | chr4.4:80324075-80324094 | None:intergenic | 20.0% |
| !! | ATTTAAGAATTACATACATG+AGG | + | chr4.4:80323183-80323202 | MS.gene80766:intron | 20.0% |
| !! | ATTTACGTAAGTGATTTATA+GGG | + | chr4.4:80322774-80322793 | MS.gene80766:intron | 20.0% |
| !! | CTCAAAATTCTATTTAGAAA+TGG | - | chr4.4:80324971-80324990 | None:intergenic | 20.0% |
| !! | CTTAAGTAAATGTGATATAT+AGG | + | chr4.4:80325474-80325493 | MS.gene80766:intron | 20.0% |
| !! | TTACAATAAGAAATACAATC+AGG | - | chr4.4:80324139-80324158 | None:intergenic | 20.0% |
| !!! | AATATCATGCTATTTCAAAA+GGG | - | chr4.4:80323434-80323453 | None:intergenic | 20.0% |
| !!! | ATAGAATTTTGAGTTTATGA+TGG | + | chr4.4:80324978-80324997 | MS.gene80766:intron | 20.0% |
| !!! | ATATCTTTTTGAAAATTGAC+TGG | - | chr4.4:80321148-80321167 | None:intergenic | 20.0% |
| !!! | GAAAAAAAAAAAAACTTGCT+TGG | + | chr4.4:80323582-80323601 | MS.gene80766:intron | 20.0% |
| !!! | GTTAAACAAAAAGTATGTAA+AGG | - | chr4.4:80323249-80323268 | None:intergenic | 20.0% |
| !!! | TGTTTAAAATCAAATTACCT+CGG | - | chr4.4:80322900-80322919 | None:intergenic | 20.0% |
| !!! | TTAAAAACAATTTTAAGGGT+TGG | + | chr4.4:80323560-80323579 | MS.gene80766:intron | 20.0% |
| !!! | TTTTTTTTTTGTTGGAAACT+TGG | + | chr4.4:80321498-80321517 | MS.gene80766:intron | 20.0% |
| ! | AAAATTGCAATGAGTATATC+GGG | + | chr4.4:80324190-80324209 | MS.gene80766:CDS | 25.0% |
| ! | AAACAAAATACCAACAAAAG+TGG | - | chr4.4:80324536-80324555 | None:intergenic | 25.0% |
| ! | AAAGCTGCTTAAAAAAAAAG+TGG | - | chr4.4:80322082-80322101 | None:intergenic | 25.0% |
| ! | AAAGTGGAAGAAAAATATAC+AGG | - | chr4.4:80324520-80324539 | None:intergenic | 25.0% |
| ! | AACAAAAATTAAAGGAGACA+TGG | - | chr4.4:80320772-80320791 | None:intergenic | 25.0% |
| ! | AAGTGGAAGAAAAATATACA+GGG | - | chr4.4:80324519-80324538 | None:intergenic | 25.0% |
| ! | ATAAATTAAACCACACTTTC+AGG | - | chr4.4:80325145-80325164 | None:intergenic | 25.0% |
| ! | ATAGAAATTGGCACTATATA+AGG | - | chr4.4:80322196-80322215 | None:intergenic | 25.0% |
| ! | ATATCTTCTTGCTTGTTTAT+TGG | + | chr4.4:80324452-80324471 | MS.gene80766:CDS | 25.0% |
| ! | ATTACATTCAATGGATATGA+AGG | + | chr4.4:80326180-80326199 | MS.gene80766:CDS | 25.0% |
| ! | ATTGAATAATTTCAGAAAGC+AGG | - | chr4.4:80324758-80324777 | None:intergenic | 25.0% |
| ! | CACATTTACTTAAGAAACAA+AGG | - | chr4.4:80325468-80325487 | None:intergenic | 25.0% |
| ! | CATGATAACATATTCAATGT+TGG | - | chr4.4:80322724-80322743 | None:intergenic | 25.0% |
| ! | GAAACAAAGTGAAATTAAAG+TGG | + | chr4.4:80322647-80322666 | MS.gene80766:intron | 25.0% |
| ! | GAAACATAGTAAAAACAAGA+TGG | - | chr4.4:80322575-80322594 | None:intergenic | 25.0% |
| ! | GAAACTGTGAAAACAATTAT+TGG | + | chr4.4:80322617-80322636 | MS.gene80766:intron | 25.0% |
| ! | TAACTATAAAGTCCTCAAAT+TGG | - | chr4.4:80321986-80322005 | None:intergenic | 25.0% |
| ! | TAGAAATTGGCACTATATAA+GGG | - | chr4.4:80322195-80322214 | None:intergenic | 25.0% |
| ! | TATTGGATACATTTCGATTA+CGG | + | chr4.4:80321851-80321870 | MS.gene80766:CDS | 25.0% |
| ! | TGATTCATACTTCAAGTATT+CGG | - | chr4.4:80322424-80322443 | None:intergenic | 25.0% |
| ! | TTAAGAAACAAAGGAAAACA+TGG | - | chr4.4:80325459-80325478 | None:intergenic | 25.0% |
| ! | TTCTTATTGTAAATCTGTGA+AGG | + | chr4.4:80324147-80324166 | MS.gene80766:intron | 25.0% |
| ! | TTGAAGAAAACAAAAGTTTC+AGG | + | chr4.4:80324930-80324949 | MS.gene80766:CDS | 25.0% |
| !! | GACATAAGCTTTGATAAATT+TGG | + | chr4.4:80321089-80321108 | MS.gene80766:CDS | 25.0% |
| !! | GTTTAAAATCAAATTACCTC+GGG | - | chr4.4:80322899-80322918 | None:intergenic | 25.0% |
| !!! | ACACAAATTTTAAGGAGTTT+TGG | + | chr4.4:80321566-80321585 | MS.gene80766:intron | 25.0% |
| !!! | ATATCATGCTATTTCAAAAG+GGG | - | chr4.4:80323433-80323452 | None:intergenic | 25.0% |
| !!! | CAATATCATGCTATTTCAAA+AGG | - | chr4.4:80323435-80323454 | None:intergenic | 25.0% |
| !!! | TATTTTTCTTCCACTTTTGT+TGG | + | chr4.4:80324523-80324542 | MS.gene80766:intron | 25.0% |
| !!! | TGATATCATGTTTTTGAAAG+TGG | + | chr4.4:80323616-80323635 | MS.gene80766:intron | 25.0% |
| AAACCCAAAAAAGAAAGTCT+GGG | + | chr4.4:80326221-80326240 | MS.gene80766:CDS | 30.0% | |
| AACAAGATATTACAATCACC+AGG | + | chr4.4:80325607-80325626 | MS.gene80766:CDS | 30.0% | |
| AACATCGACATCAAAATAGT+AGG | - | chr4.4:80324305-80324324 | None:intergenic | 30.0% | |
| ACTGATGGAATTTATTCTAC+AGG | + | chr4.4:80322332-80322351 | MS.gene80766:intron | 30.0% | |
| AGTGAGTTGCTGAATAATTT+GGG | + | chr4.4:80323050-80323069 | MS.gene80766:CDS | 30.0% | |
| ATACTTGTCAGCAATTTCTT+TGG | - | chr4.4:80320933-80320952 | None:intergenic | 30.0% | |
| ATAGACTGAGTTATGGATAT+TGG | + | chr4.4:80322295-80322314 | MS.gene80766:intron | 30.0% | |
| ATATTTCCATCTACTCTACT+CGG | + | chr4.4:80322357-80322376 | MS.gene80766:CDS | 30.0% | |
| ATCAATCTCTTCAACATACA+AGG | - | chr4.4:80325688-80325707 | None:intergenic | 30.0% | |
| ATGAATCAGGTTAGTAATCT+CGG | + | chr4.4:80322436-80322455 | MS.gene80766:intron | 30.0% | |
| ATGATTGAAAATCGGAAAAC+AGG | + | chr4.4:80320552-80320571 | MS.gene80766:CDS | 30.0% | |
| ATTATATCCTTCACCTTTAC+AGG | - | chr4.4:80323285-80323304 | None:intergenic | 30.0% | |
| ATTTGAACACCTGAAAATTG+TGG | - | chr4.4:80325097-80325116 | None:intergenic | 30.0% | |
| CAGCTTCTTAGTAGTTAATT+TGG | + | chr4.4:80322155-80322174 | MS.gene80766:intron | 30.0% | |
| CTAATATTCCAGTTGAAGTA+TGG | + | chr4.4:80322849-80322868 | MS.gene80766:CDS | 30.0% | |
| CTTAGTGATGGTCATAAAAT+CGG | + | chr4.4:80324696-80324715 | MS.gene80766:CDS | 30.0% | |
| CTTTCACTTTCTGATGATAA+CGG | + | chr4.4:80324639-80324658 | MS.gene80766:CDS | 30.0% | |
| GAATACTTGAAGTATGAATC+AGG | + | chr4.4:80322423-80322442 | MS.gene80766:CDS | 30.0% | |
| GATATTACTTGCTCATAAAC+AGG | + | chr4.4:80322873-80322892 | MS.gene80766:CDS | 30.0% | |
| GGAGAAAGAATTACATTCAA+TGG | + | chr4.4:80326171-80326190 | MS.gene80766:CDS | 30.0% | |
| GTAATCGAAATGTATCCAAT+AGG | - | chr4.4:80321852-80321871 | None:intergenic | 30.0% | |
| GTGAAGGTTAAATTAAAGCA+AGG | + | chr4.4:80324163-80324182 | MS.gene80766:intron | 30.0% | |
| TAAACCCAAAAAAGAAAGTC+TGG | + | chr4.4:80326220-80326239 | MS.gene80766:CDS | 30.0% | |
| TAAGATCTCAAAAACCTTGA+CGG | + | chr4.4:80325419-80325438 | MS.gene80766:intron | 30.0% | |
| TAATATCTCCATACTTCAAC+TGG | - | chr4.4:80322860-80322879 | None:intergenic | 30.0% | |
| TACTTGTCAGCAATTTCTTT+GGG | - | chr4.4:80320932-80320951 | None:intergenic | 30.0% | |
| TAGATACCATGCTATTCATA+AGG | + | chr4.4:80321049-80321068 | MS.gene80766:intron | 30.0% | |
| TAGTGAGTTGCTGAATAATT+TGG | + | chr4.4:80323049-80323068 | MS.gene80766:CDS | 30.0% | |
| TATAATGTCTTATACGTCTG+TGG | + | chr4.4:80320851-80320870 | MS.gene80766:CDS | 30.0% | |
| TATGTTGAAGAGATTGATGT+TGG | + | chr4.4:80325690-80325709 | MS.gene80766:CDS | 30.0% | |
| TGATAGACTAAGGAAACTAT+GGG | + | chr4.4:80324668-80324687 | MS.gene80766:CDS | 30.0% | |
| TGATTGAAAATCGGAAAACA+GGG | + | chr4.4:80320553-80320572 | MS.gene80766:CDS | 30.0% | |
| TTAAGTCAAGTGTAACAAAG+AGG | - | chr4.4:80321262-80321281 | None:intergenic | 30.0% | |
| TTAGTGATGGTCATAAAATC+GGG | + | chr4.4:80324697-80324716 | MS.gene80766:CDS | 30.0% | |
| TTCAATGCATATGTCAAGAA+TGG | - | chr4.4:80325218-80325237 | None:intergenic | 30.0% | |
| TTGATAGACTAAGGAAACTA+TGG | + | chr4.4:80324667-80324686 | MS.gene80766:CDS | 30.0% | |
| TTGATTGATAGACTGAGTTA+TGG | + | chr4.4:80322288-80322307 | MS.gene80766:intron | 30.0% | |
| TTTCAACTTTCAATCACACA+TGG | - | chr4.4:80325120-80325139 | None:intergenic | 30.0% | |
| ! | AATCACTAGAATGCACTTTT+TGG | + | chr4.4:80324088-80324107 | MS.gene80766:intron | 30.0% |
| ! | CTTAGCAAAATTTTCAGCTT+CGG | - | chr4.4:80324907-80324926 | None:intergenic | 30.0% |
| ! | GAATGTATTTCTGCATTTGT+AGG | + | chr4.4:80322980-80322999 | MS.gene80766:intron | 30.0% |
| ! | GAGTGTGTACACAAATTTTA+AGG | + | chr4.4:80321558-80321577 | MS.gene80766:intron | 30.0% |
| ! | TAAGCTTTGATAAATTTGGC+CGG | + | chr4.4:80321093-80321112 | MS.gene80766:CDS | 30.0% |
| ! | TAGGAATGAATATTTGAGGT+GGG | - | chr4.4:80324280-80324299 | None:intergenic | 30.0% |
| ! | TATCAAAAACGTGGTTGATA+AGG | + | chr4.4:80325168-80325187 | MS.gene80766:intron | 30.0% |
| ! | TGTGATGTTTTGTCAACTAT+CGG | + | chr4.4:80322009-80322028 | MS.gene80766:intron | 30.0% |
| !! | CAGAAATGTTATTTCATACG+TGG | - | chr4.4:80325249-80325268 | None:intergenic | 30.0% |
| !! | TATCATGCTATTTCAAAAGG+GGG | - | chr4.4:80323432-80323451 | None:intergenic | 30.0% |
| !!! | AAAGTGTTTTTTCCTTACCT+TGG | - | chr4.4:80325991-80326010 | None:intergenic | 30.0% |
| AAAGCAGAAAATGTGACAAC+CGG | + | chr4.4:80325064-80325083 | MS.gene80766:intron | 35.0% | |
| AAATGCAAGTTGTGAAGCTA+TGG | + | chr4.4:80325820-80325839 | MS.gene80766:intron | 35.0% | |
| AAGTTATCCTCTCCAATTTG+AGG | + | chr4.4:80321971-80321990 | MS.gene80766:intron | 35.0% | |
| ACACTTTAAATTACACACCG+TGG | + | chr4.4:80326004-80326023 | MS.gene80766:intron | 35.0% | |
| ACTCTACTTCTTCATCTTTC+TGG | - | chr4.4:80324830-80324849 | None:intergenic | 35.0% | |
| ACTTGTGCAACTTACTTTGT+AGG | + | chr4.4:80324353-80324372 | MS.gene80766:intron | 35.0% | |
| AGACATTATAACCCCTTAGT+CGG | - | chr4.4:80320841-80320860 | None:intergenic | 35.0% | |
| AGGACTATGAGTATGTTTCT+TGG | + | chr4.4:80323203-80323222 | MS.gene80766:intron | 35.0% | |
| ATAAAGTCCTCAAATTGGAG+AGG | - | chr4.4:80321981-80322000 | None:intergenic | 35.0% | |
| ATACATAGAAGCAATGGAGA+AGG | + | chr4.4:80323397-80323416 | MS.gene80766:CDS | 35.0% | |
| ATACATCAACAAGATGTCTG+TGG | + | chr4.4:80321680-80321699 | MS.gene80766:CDS | 35.0% | |
| ATACCATGCTATTCATAAGG+AGG | + | chr4.4:80321052-80321071 | MS.gene80766:CDS | 35.0% | |
| ATATTGTCCTGTAAAGGTGA+AGG | + | chr4.4:80323275-80323294 | MS.gene80766:intron | 35.0% | |
| ATTACCAGAGATATGAAGTG+GGG | + | chr4.4:80321774-80321793 | MS.gene80766:CDS | 35.0% | |
| CAAAAATATCAATGCCTTCC+AGG | - | chr4.4:80325390-80325409 | None:intergenic | 35.0% | |
| CAACAGTCAAGGAAAAATAG+AGG | + | chr4.4:80323974-80323993 | MS.gene80766:intron | 35.0% | |
| CAAGTAAGCAGCAACTTTAT+CGG | - | chr4.4:80323372-80323391 | None:intergenic | 35.0% | |
| CATTACCAGAGATATGAAGT+GGG | + | chr4.4:80321773-80321792 | MS.gene80766:CDS | 35.0% | |
| CCAATTCATCTTTCAACAGA+GGG | - | chr4.4:80321656-80321675 | None:intergenic | 35.0% | |
| CTAGGAATGAATATTTGAGG+TGG | - | chr4.4:80324281-80324300 | None:intergenic | 35.0% | |
| GACATCAAAATAGTAGGACT+AGG | - | chr4.4:80324299-80324318 | None:intergenic | 35.0% | |
| GCTTCACAACTTGCATTTAA+AGG | - | chr4.4:80325818-80325837 | None:intergenic | 35.0% | |
| GGACTAGGAATGAATATTTG+AGG | - | chr4.4:80324284-80324303 | None:intergenic | 35.0% | |
| GGGAATTAAATCTCAAGCAA+TGG | + | chr4.4:80325938-80325957 | MS.gene80766:CDS | 35.0% | |
| GTGGAAAAATCCAGATAATG+TGG | + | chr4.4:80321902-80321921 | MS.gene80766:CDS | 35.0% | |
| TAAAAACATGAACCTCGAGT+AGG | + | chr4.4:80325040-80325059 | MS.gene80766:intron | 35.0% | |
| TAAGCAGCTAAATTTGTCTG+CGG | + | chr4.4:80324608-80324627 | MS.gene80766:CDS | 35.0% | |
| TACTTATTCCATGACATTGC+TGG | + | chr4.4:80324555-80324574 | MS.gene80766:intron | 35.0% | |
| TAGAATCTCAAAAACCTGGA+AGG | + | chr4.4:80325373-80325392 | MS.gene80766:intron | 35.0% | |
| TAGAGCGAAAATTCAAGAAG+TGG | - | chr4.4:80321469-80321488 | None:intergenic | 35.0% | |
| TAGCTGCTTAAATACCTTCA+AGG | - | chr4.4:80324598-80324617 | None:intergenic | 35.0% | |
| TATCAGATACAGACTTCACA+TGG | + | chr4.4:80323003-80323022 | MS.gene80766:CDS | 35.0% | |
| TATTCAATGTTGGTCCTGTT+TGG | - | chr4.4:80322714-80322733 | None:intergenic | 35.0% | |
| TCACCTTTACAGGACAATAT+GGG | - | chr4.4:80323275-80323294 | None:intergenic | 35.0% | |
| TCCAATTCATCTTTCAACAG+AGG | - | chr4.4:80321657-80321676 | None:intergenic | 35.0% | |
| TCGATCTGCACATTAACAAA+GGG | + | chr4.4:80326256-80326275 | MS.gene80766:CDS | 35.0% | |
| TCTTGACATATGCATTGAAC+TGG | + | chr4.4:80325219-80325238 | MS.gene80766:intron | 35.0% | |
| TGAAAATTGTGGAATAGTGC+CGG | - | chr4.4:80325086-80325105 | None:intergenic | 35.0% | |
| TGATAGAATTATACGTGCAG+AGG | + | chr4.4:80324881-80324900 | MS.gene80766:CDS | 35.0% | |
| TGTGTATGTCAGTAGTAAGA+AGG | + | chr4.4:80325519-80325538 | MS.gene80766:intron | 35.0% | |
| TTACCCATATTGTCCTGTAA+AGG | + | chr4.4:80323269-80323288 | MS.gene80766:intron | 35.0% | |
| TTCAACCAACTCAACCTAAA+GGG | - | chr4.4:80326130-80326149 | None:intergenic | 35.0% | |
| TTCACCTTTACAGGACAATA+TGG | - | chr4.4:80323276-80323295 | None:intergenic | 35.0% | |
| TTCATAAGGAGGTCTATGAT+TGG | + | chr4.4:80321063-80321082 | MS.gene80766:CDS | 35.0% | |
| TTGAGATTTAATTCCCCTCA+TGG | - | chr4.4:80325934-80325953 | None:intergenic | 35.0% | |
| TTTATTGTGATACATGCGCA+AGG | + | chr4.4:80321304-80321323 | MS.gene80766:CDS | 35.0% | |
| ! | AGCAGCAGTTTTTATGACAA+GGG | - | chr4.4:80324424-80324443 | None:intergenic | 35.0% |
| ! | CGATTTTATGACCATCACTA+AGG | - | chr4.4:80324698-80324717 | None:intergenic | 35.0% |
| ! | GACAGTTATTTGCTAACTGA+TGG | + | chr4.4:80322317-80322336 | MS.gene80766:intron | 35.0% |
| ! | GTTTTCACAGTTTCTTGTAC+AGG | - | chr4.4:80322611-80322630 | None:intergenic | 35.0% |
| ! | TATCTACTAGCTTCTGAATG+TGG | + | chr4.4:80326036-80326055 | MS.gene80766:intron | 35.0% |
| ! | TGCTTAAACGATAAGAGCAT+AGG | - | chr4.4:80322137-80322156 | None:intergenic | 35.0% |
| !! | AAAACCTTGTCACTTTCATG+TGG | - | chr4.4:80321810-80321829 | None:intergenic | 35.0% |
| !! | ATCATGCTATTTCAAAAGGG+GGG | - | chr4.4:80323431-80323450 | None:intergenic | 35.0% |
| !! | CTTCTAGAATCTCAAAAACC+TGG | + | chr4.4:80325369-80325388 | MS.gene80766:intron | 35.0% |
| !! | GTTATTGTTTTGCACCCTTT+AGG | + | chr4.4:80326113-80326132 | MS.gene80766:intron | 35.0% |
| !! | TATACCAGTTGATGAAATGC+AGG | + | chr4.4:80325755-80325774 | MS.gene80766:CDS | 35.0% |
| !! | TTTTCTAAGAGTGATGGCAT+CGG | + | chr4.4:80322800-80322819 | MS.gene80766:CDS | 35.0% |
| !!! | TCTCCCAGACTTTCTTTTTT+GGG | - | chr4.4:80326227-80326246 | None:intergenic | 35.0% |
| !!! | TTTTGGGTTTAAGAGTTCGT+CGG | - | chr4.4:80326211-80326230 | None:intergenic | 35.0% |
| AAGGTTTCGTCAATACGTTG+TGG | + | chr4.4:80326327-80326346 | MS.gene80766:CDS | 40.0% | |
| AATCACCAGGCTTGATATTC+GGG | + | chr4.4:80325620-80325639 | MS.gene80766:CDS | 40.0% | |
| ACAACTTTCTTCAGAACCGA+AGG | + | chr4.4:80325877-80325896 | MS.gene80766:intron | 40.0% | |
| ACACACATGATTGGGAGAAA+TGG | + | chr4.4:80321880-80321899 | MS.gene80766:CDS | 40.0% | |
| AGACCTCCTTATGAATAGCA+TGG | - | chr4.4:80321058-80321077 | None:intergenic | 40.0% | |
| AGAGTGAACGATGGCATAAA+AGG | - | chr4.4:80324480-80324499 | None:intergenic | 40.0% | |
| AGGATAGACACATGTTGATC+AGG | - | chr4.4:80322117-80322136 | None:intergenic | 40.0% | |
| AGTTGAAACACCTGAAAGTG+TGG | + | chr4.4:80325132-80325151 | MS.gene80766:intron | 40.0% | |
| ATCAACAAGATGTCTGTGGT+CGG | + | chr4.4:80321684-80321703 | MS.gene80766:CDS | 40.0% | |
| ATCAGGAACAGTTGGAATAG+TGG | - | chr4.4:80323309-80323328 | None:intergenic | 40.0% | |
| ATGATGATCACACCAAGGTA+AGG | + | chr4.4:80325976-80325995 | MS.gene80766:intron | 40.0% | |
| ATGCAGGTTAGGTTACTATC+TGG | + | chr4.4:80325771-80325790 | MS.gene80766:intron | 40.0% | |
| CAAATTGCAACAGTGGTAGA+TGG | + | chr4.4:80323712-80323731 | MS.gene80766:intron | 40.0% | |
| CAACTTTCTTCAGAACCGAA+GGG | + | chr4.4:80325878-80325897 | MS.gene80766:intron | 40.0% | |
| CAATCACCAGGCTTGATATT+CGG | + | chr4.4:80325619-80325638 | MS.gene80766:CDS | 40.0% | |
| CACCACATCATTTGTCTTTG+TGG | - | chr4.4:80325004-80325023 | None:intergenic | 40.0% | |
| CCCTCTGTTGAAAGATGAAT+TGG | + | chr4.4:80321653-80321672 | MS.gene80766:CDS | 40.0% | |
| CCTTAATCCAACCGAATTGA+AGG | + | chr4.4:80321422-80321441 | MS.gene80766:CDS | 40.0% | |
| CCTTCAATTCGGTTGGATTA+AGG | - | chr4.4:80321425-80321444 | None:intergenic | 40.0% | |
| CTAACCTGCATTTCATCAAC+TGG | - | chr4.4:80325762-80325781 | None:intergenic | 40.0% | |
| CTATATAAGGGCAAAGCAAG+AGG | - | chr4.4:80322183-80322202 | None:intergenic | 40.0% | |
| CTATGGGATATCCTTAGTGA+TGG | + | chr4.4:80324684-80324703 | MS.gene80766:CDS | 40.0% | |
| CTTGTCATAAAAACTGCTGC+TGG | + | chr4.4:80324423-80324442 | MS.gene80766:CDS | 40.0% | |
| GCATTACCAGAGATATGAAG+TGG | + | chr4.4:80321772-80321791 | MS.gene80766:CDS | 40.0% | |
| GGAGAGGATAACTTACACTA+TGG | - | chr4.4:80321965-80321984 | None:intergenic | 40.0% | |
| GGAGCAATACATAGAAGCAA+TGG | + | chr4.4:80323391-80323410 | MS.gene80766:CDS | 40.0% | |
| GTCGATCTGCACATTAACAA+AGG | + | chr4.4:80326255-80326274 | MS.gene80766:CDS | 40.0% | |
| GTTACATCATCAGGAACAGT+TGG | - | chr4.4:80323317-80323336 | None:intergenic | 40.0% | |
| GTTCAACCAACTCAACCTAA+AGG | - | chr4.4:80326131-80326150 | None:intergenic | 40.0% | |
| TCATAACATCAATGCCGTCA+AGG | - | chr4.4:80325436-80325455 | None:intergenic | 40.0% | |
| TGAAAATCGGAAAACAGGGA+AGG | + | chr4.4:80320557-80320576 | MS.gene80766:CDS | 40.0% | |
| TGAAACAGCTCCACATTATC+TGG | - | chr4.4:80321915-80321934 | None:intergenic | 40.0% | |
| TGAGGTACGTTGTTGACATA+AGG | - | chr4.4:80320630-80320649 | None:intergenic | 40.0% | |
| TTACCAGAGATATGAAGTGG+GGG | + | chr4.4:80321775-80321794 | MS.gene80766:CDS | 40.0% | |
| TTCCAATGATGATCACACCA+AGG | + | chr4.4:80325971-80325990 | MS.gene80766:CDS | 40.0% | |
| ! | ACAGTAGTGGAGGATATTAG+AGG | + | chr4.4:80323773-80323792 | MS.gene80766:intron | 40.0% |
| ! | ACGGTGATGTTGATAGACTA+AGG | + | chr4.4:80324658-80324677 | MS.gene80766:CDS | 40.0% |
| ! | AGATGATGATGCGCATTAGA+GGG | + | chr4.4:80323686-80323705 | MS.gene80766:intron | 40.0% |
| ! | CAGCAGCAGTTTTTATGACA+AGG | - | chr4.4:80324425-80324444 | None:intergenic | 40.0% |
| ! | CAGTAGTGGAGGATATTAGA+GGG | + | chr4.4:80323774-80323793 | MS.gene80766:intron | 40.0% |
| ! | CGATAAAGTTGCTGCTTACT+TGG | + | chr4.4:80323370-80323389 | MS.gene80766:CDS | 40.0% |
| ! | CTTCTTCATCTTTCTGGTCA+AGG | - | chr4.4:80324824-80324843 | None:intergenic | 40.0% |
| ! | CTTTGTAGGAAACCGCATTT+TGG | + | chr4.4:80324367-80324386 | MS.gene80766:intron | 40.0% |
| ! | GCAAATTTCAGTTTGCTCGA+GGG | - | chr4.4:80321126-80321145 | None:intergenic | 40.0% |
| ! | GCTGTTTCAGTTTATGGGAA+AGG | + | chr4.4:80321926-80321945 | MS.gene80766:CDS | 40.0% |
| ! | GGCACTATTCCACAATTTTC+AGG | + | chr4.4:80325085-80325104 | MS.gene80766:intron | 40.0% |
| ! | GGGAGAACAATTTTCTTCCA+GGG | - | chr4.4:80320912-80320931 | None:intergenic | 40.0% |
| ! | GTGACAAGGTTTTCTATGTC+TGG | + | chr4.4:80321817-80321836 | MS.gene80766:CDS | 40.0% |
| ! | GTGGAGCTGTTTCAGTTTAT+GGG | + | chr4.4:80321921-80321940 | MS.gene80766:CDS | 40.0% |
| ! | TACCTTGGTGTGATCATCAT+TGG | - | chr4.4:80325976-80325995 | None:intergenic | 40.0% |
| ! | TATCGGCCAATTTTCTCGTT+GGG | - | chr4.4:80323355-80323374 | None:intergenic | 40.0% |
| ! | TGGGAGAACAATTTTCTTCC+AGG | - | chr4.4:80320913-80320932 | None:intergenic | 40.0% |
| ! | TGTGGAGCTGTTTCAGTTTA+TGG | + | chr4.4:80321920-80321939 | MS.gene80766:CDS | 40.0% |
| ! | TTATCGGCCAATTTTCTCGT+TGG | - | chr4.4:80323356-80323375 | None:intergenic | 40.0% |
| ! | TTTCTAAGAGTGATGGCATC+GGG | + | chr4.4:80322801-80322820 | MS.gene80766:CDS | 40.0% |
| ! | TTTGGGTTTAAGAGTTCGTC+GGG | - | chr4.4:80326210-80326229 | None:intergenic | 40.0% |
| !! | ATCGTATTCTGAAGCCAAAC+AGG | + | chr4.4:80322697-80322716 | MS.gene80766:intron | 40.0% |
| !! | CAGTTGATGAAATGCAGGTT+AGG | + | chr4.4:80325760-80325779 | MS.gene80766:intron | 40.0% |
| !! | CTTGTCACTTTCATGTGGAA+CGG | - | chr4.4:80321805-80321824 | None:intergenic | 40.0% |
| !! | GACTCAGAGATGGATTAGAA+CGG | + | chr4.4:80321745-80321764 | MS.gene80766:CDS | 40.0% |
| !! | GGGAAGTTTTCTAAGAGTGA+TGG | + | chr4.4:80322794-80322813 | MS.gene80766:intron | 40.0% |
| !! | TCGGGTTGGTCTCATAAAAA+AGG | + | chr4.4:80325638-80325657 | MS.gene80766:CDS | 40.0% |
| !! | TTGTCACTTTCATGTGGAAC+GGG | - | chr4.4:80321804-80321823 | None:intergenic | 40.0% |
| !! | TTTTCTGCTTTTCCTACTCG+AGG | - | chr4.4:80325055-80325074 | None:intergenic | 40.0% |
| !!! | AGTTTTATTGCCAAACCCGA+AGG | + | chr4.4:80323095-80323114 | MS.gene80766:CDS | 40.0% |
| !!! | GTCTCCCAGACTTTCTTTTT+TGG | - | chr4.4:80326228-80326247 | None:intergenic | 40.0% |
| !!! | TTCTCTGGTTTTTGCCTTGA+AGG | + | chr4.4:80324581-80324600 | MS.gene80766:intron | 40.0% |
| AAAGAGCTCAACCAACCTTC+GGG | - | chr4.4:80323113-80323132 | None:intergenic | 45.0% | |
| AAGGTACATGTCCAACTCCT+GGG | + | chr4.4:80321349-80321368 | MS.gene80766:CDS | 45.0% | |
| AATTACACACCGTGGCACTA+TGG | + | chr4.4:80326012-80326031 | MS.gene80766:intron | 45.0% | |
| ACATGTCACACTGATCTCCT+CGG | - | chr4.4:80321392-80321411 | None:intergenic | 45.0% | |
| AGCTCCCTGAACAATAGCTT+GGG | - | chr4.4:80324726-80324745 | None:intergenic | 45.0% | |
| AGTAGATACCCATAGTGCCA+CGG | - | chr4.4:80326024-80326043 | None:intergenic | 45.0% | |
| AGTGGTCTGTATCACGAAGA+CGG | - | chr4.4:80321620-80321639 | None:intergenic | 45.0% | |
| ATGTTGCGTTTACCTTCCAC+GGG | - | chr4.4:80320588-80320607 | None:intergenic | 45.0% | |
| ATTACACACCGTGGCACTAT+GGG | + | chr4.4:80326013-80326032 | MS.gene80766:intron | 45.0% | |
| ATTCCACTCAACACTTCAGC+TGG | + | chr4.4:80326297-80326316 | MS.gene80766:CDS | 45.0% | |
| CAACAGTGGTAGATGGTGTT+GGG | + | chr4.4:80323719-80323738 | MS.gene80766:intron | 45.0% | |
| CAATGAGTATATCGGGTGAG+GGG | + | chr4.4:80324197-80324216 | MS.gene80766:CDS | 45.0% | |
| CACATGATTGGGAGAAATGG+TGG | + | chr4.4:80321883-80321902 | MS.gene80766:CDS | 45.0% | |
| CAGACAAGAACTGTTGTCAG+TGG | + | chr4.4:80325720-80325739 | MS.gene80766:CDS | 45.0% | |
| CGCATCATCATCTGGATTCT+GGG | - | chr4.4:80323679-80323698 | None:intergenic | 45.0% | |
| CGTTCCACATGAAAGTGACA+AGG | + | chr4.4:80321803-80321822 | MS.gene80766:CDS | 45.0% | |
| CTCTAATGCGCATCATCATC+TGG | - | chr4.4:80323687-80323706 | None:intergenic | 45.0% | |
| CTTACCTCAAGAGTGAACGA+TGG | - | chr4.4:80324489-80324508 | None:intergenic | 45.0% | |
| GAAAGAGCTCAACCAACCTT+CGG | - | chr4.4:80323114-80323133 | None:intergenic | 45.0% | |
| GACACCCAAGCTATTGTTCA+GGG | + | chr4.4:80324719-80324738 | MS.gene80766:CDS | 45.0% | |
| GACATGTACCTTGTACAAGC+CGG | - | chr4.4:80321341-80321360 | None:intergenic | 45.0% | |
| GAGGGAGCTCAAGAAAAAAG+TGG | - | chr4.4:80321638-80321657 | None:intergenic | 45.0% | |
| GATGTTGCGTTTACCTTCCA+CGG | - | chr4.4:80320589-80320608 | None:intergenic | 45.0% | |
| GCAATGAGTATATCGGGTGA+GGG | + | chr4.4:80324196-80324215 | MS.gene80766:CDS | 45.0% | |
| GCAGTAACGAGCAAACACAT+CGG | - | chr4.4:80320819-80320838 | None:intergenic | 45.0% | |
| GGCCACAAAGACAAATGATG+TGG | + | chr4.4:80324999-80325018 | MS.gene80766:intron | 45.0% | |
| GGCTTGATTGTTGCAACAGA+TGG | + | chr4.4:80325540-80325559 | MS.gene80766:intron | 45.0% | |
| GTCAACAACGTACCTCATCT+CGG | + | chr4.4:80320633-80320652 | MS.gene80766:CDS | 45.0% | |
| GTTGCGCCAAAAACGACAAA+AGG | + | chr4.4:80323798-80323817 | MS.gene80766:intron | 45.0% | |
| TACCAGAGATATGAAGTGGG+GGG | + | chr4.4:80321776-80321795 | MS.gene80766:CDS | 45.0% | |
| TACTCGGAACCGGTGAAAAT+TGG | + | chr4.4:80322373-80322392 | MS.gene80766:CDS | 45.0% | |
| TATGCCATCGTTCACTCTTG+AGG | + | chr4.4:80324482-80324501 | MS.gene80766:CDS | 45.0% | |
| TCTCCAACAGAAGCAGAACT+GGG | - | chr4.4:80326156-80326175 | None:intergenic | 45.0% | |
| TGACATTGCTGGTACTTCTC+TGG | + | chr4.4:80324566-80324585 | MS.gene80766:intron | 45.0% | |
| TGAGGGGAATGCATATTTGC+AGG | + | chr4.4:80324213-80324232 | MS.gene80766:CDS | 45.0% | |
| TGCAAAGTACACAGACCCTT+CGG | - | chr4.4:80325896-80325915 | None:intergenic | 45.0% | |
| TGCAATGAGTATATCGGGTG+AGG | + | chr4.4:80324195-80324214 | MS.gene80766:CDS | 45.0% | |
| TGTGAAAACAATTCTGCCCG+AGG | + | chr4.4:80321372-80321391 | MS.gene80766:CDS | 45.0% | |
| TTATTGCCAAACCCGAAGGT+TGG | + | chr4.4:80323099-80323118 | MS.gene80766:intron | 45.0% | |
| TTCTCCAACAGAAGCAGAAC+TGG | - | chr4.4:80326157-80326176 | None:intergenic | 45.0% | |
| TTGGGTTTAAGAGTTCGTCG+GGG | - | chr4.4:80326209-80326228 | None:intergenic | 45.0% | |
| ! | ACAACAATTCTGGAAGGTGC+TGG | + | chr4.4:80323833-80323852 | MS.gene80766:intron | 45.0% |
| ! | ATGGTGGAGAATGTTAGCAG+CGG | + | chr4.4:80323862-80323881 | MS.gene80766:intron | 45.0% |
| ! | CAATTTTCTCGTTGGGTCGT+GGG | - | chr4.4:80323348-80323367 | None:intergenic | 45.0% |
| ! | CAGATGATGATGCGCATTAG+AGG | + | chr4.4:80323685-80323704 | MS.gene80766:intron | 45.0% |
| ! | CGCTGAAGTCCAATTTTCAC+CGG | - | chr4.4:80322385-80322404 | None:intergenic | 45.0% |
| ! | GAGAGGGGTTTTCCTTGTAA+AGG | - | chr4.4:80324395-80324414 | None:intergenic | 45.0% |
| ! | GCAGAATTGTTTTCACACCC+AGG | - | chr4.4:80321369-80321388 | None:intergenic | 45.0% |
| ! | GGCAAATTTCAGTTTGCTCG+AGG | - | chr4.4:80321127-80321146 | None:intergenic | 45.0% |
| ! | TTCTAAGAGTGATGGCATCG+GGG | + | chr4.4:80322802-80322821 | MS.gene80766:CDS | 45.0% |
| ! | TTGTTTTCACACCCAGGAGT+TGG | - | chr4.4:80321363-80321382 | None:intergenic | 45.0% |
| !! | AGGAGTTTTGGCACTGTAAC+AGG | + | chr4.4:80321578-80321597 | MS.gene80766:intron | 45.0% |
| !! | CAAAAACGACAAAAGGTGCC+TGG | + | chr4.4:80323805-80323824 | MS.gene80766:intron | 45.0% |
| !! | CTTGTAAAGGCGCCAAAATG+CGG | - | chr4.4:80324382-80324401 | None:intergenic | 45.0% |
| !! | GAGAAGTACCAGCAATGTCA+TGG | - | chr4.4:80324566-80324585 | None:intergenic | 45.0% |
| !! | GGCTTGCTACACACATGATT+GGG | + | chr4.4:80321872-80321891 | MS.gene80766:CDS | 45.0% |
| !! | GGTTGAAAAGCATCCTAGTG+CGG | + | chr4.4:80325659-80325678 | MS.gene80766:CDS | 45.0% |
| !! | GTCTGTGGTACTGATGAGTA+TGG | + | chr4.4:80320866-80320885 | MS.gene80766:CDS | 45.0% |
| !! | TTGCACCCTTTAGGTTGAGT+TGG | + | chr4.4:80326122-80326141 | MS.gene80766:intron | 45.0% |
| !!! | CAGGCACCTTTTGTCGTTTT+TGG | - | chr4.4:80323807-80323826 | None:intergenic | 45.0% |
| !! | TAAAAAAAAACAAAAATTAA+AGG | - | chr4.4:80320780-80320799 | None:intergenic | 5.0% |
| !!! | TAATTTAAAAACAATTTTAA+GGG | + | chr4.4:80323556-80323575 | MS.gene80766:intron | 5.0% |
| !!! | TTAATTTAAAAACAATTTTA+AGG | + | chr4.4:80323555-80323574 | MS.gene80766:intron | 5.0% |
| AACCCCCCACTTCATATCTC+TGG | - | chr4.4:80321781-80321800 | None:intergenic | 50.0% | |
| ACATACAAGGACTCCGCACT+AGG | - | chr4.4:80325675-80325694 | None:intergenic | 50.0% | |
| ACCAACCCGAATATCAAGCC+TGG | - | chr4.4:80325628-80325647 | None:intergenic | 50.0% | |
| ACCAATGCACGACTCAGAGA+TGG | + | chr4.4:80321735-80321754 | MS.gene80766:CDS | 50.0% | |
| ACCAGGCTTGATATTCGGGT+TGG | + | chr4.4:80325624-80325643 | MS.gene80766:CDS | 50.0% | |
| AGAGAGAGAGAGAGAGAGAG+AGG | - | chr4.4:80320679-80320698 | None:intergenic | 50.0% | |
| ATGACAAGGGAGCAGAGAGA+GGG | - | chr4.4:80324411-80324430 | None:intergenic | 50.0% | |
| ATTGAAGGATCCGAGGTGCA+AGG | + | chr4.4:80321437-80321456 | MS.gene80766:CDS | 50.0% | |
| CAACCGAATTGAAGGATCCG+AGG | + | chr4.4:80321430-80321449 | MS.gene80766:CDS | 50.0% | |
| CAAGCTATTGTTCAGGGAGC+TGG | + | chr4.4:80324725-80324744 | MS.gene80766:CDS | 50.0% | |
| CAAGGTACATGTCCAACTCC+TGG | + | chr4.4:80321348-80321367 | MS.gene80766:CDS | 50.0% | |
| CACTTCAGCTGGTGTTTGCA+AGG | + | chr4.4:80326308-80326327 | MS.gene80766:CDS | 50.0% | |
| CAGCTCCCTGAACAATAGCT+TGG | - | chr4.4:80324727-80324746 | None:intergenic | 50.0% | |
| CATGTCACACTGATCTCCTC+GGG | - | chr4.4:80321391-80321410 | None:intergenic | 50.0% | |
| CCAATGATGTTGCCGAGATG+AGG | - | chr4.4:80320648-80320667 | None:intergenic | 50.0% | |
| CCACGACCCAACGAGAAAAT+TGG | + | chr4.4:80323346-80323365 | MS.gene80766:CDS | 50.0% | |
| CCATCTACTCTACTCGGAAC+CGG | + | chr4.4:80322363-80322382 | MS.gene80766:CDS | 50.0% | |
| CCTCATCTCGGCAACATCAT+TGG | + | chr4.4:80320645-80320664 | MS.gene80766:CDS | 50.0% | |
| CTCGGATCCTTCAATTCGGT+TGG | - | chr4.4:80321432-80321451 | None:intergenic | 50.0% | |
| GAGAATGTTAGCAGCGGCAA+TGG | + | chr4.4:80323868-80323887 | MS.gene80766:intron | 50.0% | |
| GAGTCAGCGGTTACATCATC+AGG | - | chr4.4:80323326-80323345 | None:intergenic | 50.0% | |
| GCAACAGTGGTAGATGGTGT+TGG | + | chr4.4:80323718-80323737 | MS.gene80766:intron | 50.0% | |
| GCACCTCGGATCCTTCAATT+CGG | - | chr4.4:80321436-80321455 | None:intergenic | 50.0% | |
| GCAGCTAAATTTGTCTGCGG+AGG | + | chr4.4:80324611-80324630 | MS.gene80766:CDS | 50.0% | |
| GCGCATCATCATCTGGATTC+TGG | - | chr4.4:80323680-80323699 | None:intergenic | 50.0% | |
| GGACACCCAAGCTATTGTTC+AGG | + | chr4.4:80324718-80324737 | MS.gene80766:CDS | 50.0% | |
| GGAGATCAGTGTGACATGTG+CGG | + | chr4.4:80321393-80321412 | MS.gene80766:CDS | 50.0% | |
| GTGGCGACAACAATTCTGGA+AGG | + | chr4.4:80323827-80323846 | MS.gene80766:intron | 50.0% | |
| GTGGTCTGTATCACGAAGAC+GGG | - | chr4.4:80321619-80321638 | None:intergenic | 50.0% | |
| GTGGTTACTACCTTGCACCT+CGG | - | chr4.4:80321450-80321469 | None:intergenic | 50.0% | |
| TATGACAAGGGAGCAGAGAG+AGG | - | chr4.4:80324412-80324431 | None:intergenic | 50.0% | |
| TCCAATTGTAACGAGAGCCC+TGG | + | chr4.4:80320892-80320911 | MS.gene80766:CDS | 50.0% | |
| TCCAGGGCTCTCGTTACAAT+TGG | - | chr4.4:80320896-80320915 | None:intergenic | 50.0% | |
| TCCATCTCTGAGTCGTGCAT+TGG | - | chr4.4:80321739-80321758 | None:intergenic | 50.0% | |
| TGGTCTGTATCACGAAGACG+GGG | - | chr4.4:80321618-80321637 | None:intergenic | 50.0% | |
| TTAATTCCCCTCATGGCTGC+TGG | - | chr4.4:80325927-80325946 | None:intergenic | 50.0% | |
| TTGACTGTTGACGCTTCCAC+TGG | - | chr4.4:80323964-80323983 | None:intergenic | 50.0% | |
| TTGTTCAGGGAGCTGGTAAG+TGG | + | chr4.4:80324732-80324751 | MS.gene80766:intron | 50.0% | |
| ! | AAGGTAGAGCACTCGTGATG+AGG | - | chr4.4:80320611-80320630 | None:intergenic | 50.0% |
| ! | AGATGTCTGTGGTCGGTTCA+TGG | + | chr4.4:80321691-80321710 | MS.gene80766:CDS | 50.0% |
| ! | AGGGCGTCAAATTGCAACAG+TGG | + | chr4.4:80323705-80323724 | MS.gene80766:intron | 50.0% |
| ! | AGTGATGGCATCGGGGTATT+TGG | + | chr4.4:80322809-80322828 | MS.gene80766:CDS | 50.0% |
| ! | CCAATTTTCTCGTTGGGTCG+TGG | - | chr4.4:80323349-80323368 | None:intergenic | 50.0% |
| ! | GCGCAAGGTTTTTATGCGAC+CGG | + | chr4.4:80321319-80321338 | MS.gene80766:CDS | 50.0% |
| ! | TAGATGGTGTTGGGCAGTGA+TGG | + | chr4.4:80323728-80323747 | MS.gene80766:intron | 50.0% |
| ! | TGCTCGTTACTGCCGACTAA+GGG | + | chr4.4:80320826-80320845 | MS.gene80766:CDS | 50.0% |
| ! | TTCAGTTTGCTCGAGGGAAG+AGG | - | chr4.4:80321120-80321139 | None:intergenic | 50.0% |
| ! | TTGCTCGTTACTGCCGACTA+AGG | + | chr4.4:80320825-80320844 | MS.gene80766:CDS | 50.0% |
| !! | AAACGACAAAAGGTGCCTGG+TGG | + | chr4.4:80323808-80323827 | MS.gene80766:intron | 50.0% |
| !! | ACACCAGCTGAAGTGTTGAG+TGG | - | chr4.4:80326303-80326322 | None:intergenic | 50.0% |
| !! | AGTGGAAGCGTCAACAGTCA+AGG | + | chr4.4:80323963-80323982 | MS.gene80766:intron | 50.0% |
| !! | CAATTCTGGAAGGTGCTGGA+TGG | + | chr4.4:80323837-80323856 | MS.gene80766:intron | 50.0% |
| !! | CGCATTTTGGCGCCTTTACA+AGG | + | chr4.4:80324380-80324399 | MS.gene80766:CDS | 50.0% |
| !! | CGGCTTGCTACACACATGAT+TGG | + | chr4.4:80321871-80321890 | MS.gene80766:CDS | 50.0% |
| !! | TTATGCGACCGGCTTGTACA+AGG | + | chr4.4:80321330-80321349 | MS.gene80766:CDS | 50.0% |
| AACAGGGAAGGTTCTTCCCG+TGG | + | chr4.4:80320569-80320588 | MS.gene80766:CDS | 55.0% | |
| ACATCGGCACTTAACACGCC+TGG | - | chr4.4:80320803-80320822 | None:intergenic | 55.0% | |
| ACCTAAAGCCAGCAGCCATG+AGG | + | chr4.4:80325916-80325935 | MS.gene80766:CDS | 55.0% | |
| CACCTGCTCCACTGTACTCT+CGG | - | chr4.4:80321189-80321208 | None:intergenic | 55.0% | |
| CCAACAGAAGCAGAACTGGG+TGG | - | chr4.4:80326153-80326172 | None:intergenic | 55.0% | |
| CCACCCAGTTCTGCTTCTGT+TGG | + | chr4.4:80326150-80326169 | MS.gene80766:CDS | 55.0% | |
| CCAGAATTGTTGTCGCCACC+AGG | - | chr4.4:80323826-80323845 | None:intergenic | 55.0% | |
| CCGGTTCCGAGTAGAGTAGA+TGG | - | chr4.4:80322366-80322385 | None:intergenic | 55.0% | |
| CCTAAAGCCAGCAGCCATGA+GGG | + | chr4.4:80325917-80325936 | MS.gene80766:CDS | 55.0% | |
| CTAAAGCCAGCAGCCATGAG+GGG | + | chr4.4:80325918-80325937 | MS.gene80766:CDS | 55.0% | |
| CTTGCTCATAAACAGGCCCG+AGG | + | chr4.4:80322880-80322899 | MS.gene80766:CDS | 55.0% | |
| GGTCTGTATCACGAAGACGG+GGG | - | chr4.4:80321617-80321636 | None:intergenic | 55.0% | |
| TGACAAGGGAGCAGAGAGAG+GGG | - | chr4.4:80324410-80324429 | None:intergenic | 55.0% | |
| TGGCAGACTGGCAGTGAGTA+GGG | + | chr4.4:80323651-80323670 | MS.gene80766:intron | 55.0% | |
| TTTGCTCGAGGGAAGAGGTC+CGG | - | chr4.4:80321115-80321134 | None:intergenic | 55.0% | |
| ! | ATGGCTCTCCGAGAGTACAG+TGG | + | chr4.4:80321178-80321197 | MS.gene80766:CDS | 55.0% |
| ! | CCTGGTGGCGACAACAATTC+TGG | + | chr4.4:80323823-80323842 | MS.gene80766:intron | 55.0% |
| ! | GAAAGTGGAGTACCCAGCAC+TGG | + | chr4.4:80323631-80323650 | MS.gene80766:intron | 55.0% |
| ! | GCTCAACCAACCTTCGGGTT+TGG | - | chr4.4:80323108-80323127 | None:intergenic | 55.0% |
| ! | GCTCGTTACTGCCGACTAAG+GGG | + | chr4.4:80320827-80320846 | MS.gene80766:CDS | 55.0% |
| ! | GTCTGGTTCGATGCGCCTAT+TGG | + | chr4.4:80321834-80321853 | MS.gene80766:CDS | 55.0% |
| ! | TGGTGTTGGGCAGTGATGGA+AGG | + | chr4.4:80323732-80323751 | MS.gene80766:intron | 55.0% |
| !! | AAGGTGCTGGATGGCTATGG+TGG | + | chr4.4:80323846-80323865 | MS.gene80766:intron | 55.0% |
| !! | GAAGGTACCTTGCAGCAGTG+GGG | + | chr4.4:80323750-80323769 | MS.gene80766:intron | 55.0% |
| !! | GGAAGGTACCTTGCAGCAGT+GGG | + | chr4.4:80323749-80323768 | MS.gene80766:intron | 55.0% |
| !! | TGGAAGGTACCTTGCAGCAG+TGG | + | chr4.4:80323748-80323767 | MS.gene80766:intron | 55.0% |
| !! | TGGAAGGTGCTGGATGGCTA+TGG | + | chr4.4:80323843-80323862 | MS.gene80766:intron | 55.0% |
| ACTGCCAGTCTGCCAGTGCT+GGG | - | chr4.4:80323646-80323665 | None:intergenic | 60.0% | |
| AGCAGTGGGGACAGTAGTGG+AGG | + | chr4.4:80323763-80323782 | MS.gene80766:intron | 60.0% | |
| CTACTGTCCCCACTGCTGCA+AGG | - | chr4.4:80323760-80323779 | None:intergenic | 60.0% | |
| CTGGCAGACTGGCAGTGAGT+AGG | + | chr4.4:80323650-80323669 | MS.gene80766:intron | 60.0% | |
| GGGAAGGTTCTTCCCGTGGA+AGG | + | chr4.4:80320573-80320592 | MS.gene80766:CDS | 60.0% | |
| TGCAGCAGTGGGGACAGTAG+TGG | + | chr4.4:80323760-80323779 | MS.gene80766:intron | 60.0% | |
| ! | ATGGTGTCAGGTGGAGGTGG+CGG | + | chr4.4:80323936-80323955 | MS.gene80766:intron | 60.0% |
| ! | CAGTGGATGGTGTCAGGTGG+AGG | + | chr4.4:80323930-80323949 | MS.gene80766:intron | 60.0% |
| ! | CTCCGAGAGTACAGTGGAGC+AGG | + | chr4.4:80321184-80321203 | MS.gene80766:CDS | 60.0% |
| ! | TGGATGGTGTCAGGTGGAGG+TGG | + | chr4.4:80323933-80323952 | MS.gene80766:intron | 60.0% |
| ! | TGGCAGTGGATGGTGTCAGG+TGG | + | chr4.4:80323927-80323946 | MS.gene80766:intron | 60.0% |
| !! | AGTACCCAGCACTGGCAGAC+TGG | + | chr4.4:80323639-80323658 | MS.gene80766:intron | 60.0% |
| !! | CCCTCATGGCTGCTGGCTTT+AGG | - | chr4.4:80325920-80325939 | None:intergenic | 60.0% |
| !! | GCAGTGATGGTGGAGGTGGA+GGG | + | chr4.4:80323904-80323923 | MS.gene80766:intron | 60.0% |
| AGGTGGAGGGTGGCAGTGGA+TGG | + | chr4.4:80323917-80323936 | MS.gene80766:intron | 65.0% | |
| CACTGCCAGTCTGCCAGTGC+TGG | - | chr4.4:80323647-80323666 | None:intergenic | 65.0% | |
| CCTCCACCATCACTGCCACC+TGG | - | chr4.4:80323900-80323919 | None:intergenic | 65.0% | |
| CGTGTGCCAGGTGGCAGTGA+TGG | + | chr4.4:80323891-80323910 | MS.gene80766:intron | 65.0% | |
| CGTTGGGTCGTGGGAGTCAG+CGG | - | chr4.4:80323339-80323358 | None:intergenic | 65.0% | |
| GGGTGGCAGTGGATGGTGTC+AGG | + | chr4.4:80323924-80323943 | MS.gene80766:intron | 65.0% | |
| GTGCCAGGTGGCAGTGATGG+TGG | + | chr4.4:80323894-80323913 | MS.gene80766:intron | 65.0% | |
| !! | CCAGGTGGCAGTGATGGTGG+AGG | + | chr4.4:80323897-80323916 | MS.gene80766:intron | 65.0% |
| !! | GGCAGTGATGGTGGAGGTGG+AGG | + | chr4.4:80323903-80323922 | MS.gene80766:intron | 65.0% |
| !! | GGTGGCAGTGATGGTGGAGG+TGG | + | chr4.4:80323900-80323919 | MS.gene80766:intron | 65.0% |
| !! | GTGATGGTGGAGGTGGAGGG+TGG | + | chr4.4:80323907-80323926 | MS.gene80766:intron | 65.0% |
| CAGCGGCAATGGCGTGTGCC+AGG | + | chr4.4:80323879-80323898 | MS.gene80766:intron | 70.0% | |
| CGGCAATGGCGTGTGCCAGG+TGG | + | chr4.4:80323882-80323901 | MS.gene80766:intron | 70.0% | |
| GTGGAGGTGGAGGGTGGCAG+TGG | + | chr4.4:80323913-80323932 | MS.gene80766:intron | 70.0% | |
| ! | GGTGGAGGTGGCGGCTCCAG+TGG | + | chr4.4:80323945-80323964 | MS.gene80766:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 80320552 | 80326362 | 80320552 | ID=MS.gene80766 |
| chr4.4 | mRNA | 80320552 | 80326362 | 80320552 | ID=MS.gene80766.t1;Parent=MS.gene80766 |
| chr4.4 | exon | 80320552 | 80320669 | 80320552 | ID=MS.gene80766.t1.exon1;Parent=MS.gene80766.t1 |
| chr4.4 | CDS | 80320552 | 80320669 | 80320552 | ID=cds.MS.gene80766.t1;Parent=MS.gene80766.t1 |
| chr4.4 | exon | 80320804 | 80320948 | 80320804 | ID=MS.gene80766.t1.exon2;Parent=MS.gene80766.t1 |
| chr4.4 | CDS | 80320804 | 80320948 | 80320804 | ID=cds.MS.gene80766.t1;Parent=MS.gene80766.t1 |
| chr4.4 | exon | 80321052 | 80321205 | 80321052 | ID=MS.gene80766.t1.exon3;Parent=MS.gene80766.t1 |
| chr4.4 | CDS | 80321052 | 80321205 | 80321052 | ID=cds.MS.gene80766.t1;Parent=MS.gene80766.t1 |
| chr4.4 | exon | 80321303 | 80321458 | 80321303 | ID=MS.gene80766.t1.exon4;Parent=MS.gene80766.t1 |
| chr4.4 | CDS | 80321303 | 80321458 | 80321303 | ID=cds.MS.gene80766.t1;Parent=MS.gene80766.t1 |
| chr4.4 | exon | 80321600 | 80321968 | 80321600 | ID=MS.gene80766.t1.exon5;Parent=MS.gene80766.t1 |
| chr4.4 | CDS | 80321600 | 80321968 | 80321600 | ID=cds.MS.gene80766.t1;Parent=MS.gene80766.t1 |
| chr4.4 | exon | 80322354 | 80322444 | 80322354 | ID=MS.gene80766.t1.exon6;Parent=MS.gene80766.t1 |
| chr4.4 | CDS | 80322354 | 80322444 | 80322354 | ID=cds.MS.gene80766.t1;Parent=MS.gene80766.t1 |
| chr4.4 | exon | 80322795 | 80322901 | 80322795 | ID=MS.gene80766.t1.exon7;Parent=MS.gene80766.t1 |
| chr4.4 | CDS | 80322795 | 80322901 | 80322795 | ID=cds.MS.gene80766.t1;Parent=MS.gene80766.t1 |
| chr4.4 | exon | 80323002 | 80323116 | 80323002 | ID=MS.gene80766.t1.exon8;Parent=MS.gene80766.t1 |
| chr4.4 | CDS | 80323002 | 80323116 | 80323002 | ID=cds.MS.gene80766.t1;Parent=MS.gene80766.t1 |
| chr4.4 | exon | 80323291 | 80323418 | 80323291 | ID=MS.gene80766.t1.exon9;Parent=MS.gene80766.t1 |
| chr4.4 | CDS | 80323291 | 80323418 | 80323291 | ID=cds.MS.gene80766.t1;Parent=MS.gene80766.t1 |
| chr4.4 | exon | 80324169 | 80324234 | 80324169 | ID=MS.gene80766.t1.exon10;Parent=MS.gene80766.t1 |
| chr4.4 | CDS | 80324169 | 80324234 | 80324169 | ID=cds.MS.gene80766.t1;Parent=MS.gene80766.t1 |
| chr4.4 | exon | 80324375 | 80324503 | 80324375 | ID=MS.gene80766.t1.exon11;Parent=MS.gene80766.t1 |
| chr4.4 | CDS | 80324375 | 80324503 | 80324375 | ID=cds.MS.gene80766.t1;Parent=MS.gene80766.t1 |
| chr4.4 | exon | 80324603 | 80324746 | 80324603 | ID=MS.gene80766.t1.exon12;Parent=MS.gene80766.t1 |
| chr4.4 | CDS | 80324603 | 80324746 | 80324603 | ID=cds.MS.gene80766.t1;Parent=MS.gene80766.t1 |
| chr4.4 | exon | 80324831 | 80324951 | 80324831 | ID=MS.gene80766.t1.exon13;Parent=MS.gene80766.t1 |
| chr4.4 | CDS | 80324831 | 80324951 | 80324831 | ID=cds.MS.gene80766.t1;Parent=MS.gene80766.t1 |
| chr4.4 | exon | 80325559 | 80325776 | 80325559 | ID=MS.gene80766.t1.exon14;Parent=MS.gene80766.t1 |
| chr4.4 | CDS | 80325559 | 80325776 | 80325559 | ID=cds.MS.gene80766.t1;Parent=MS.gene80766.t1 |
| chr4.4 | exon | 80325891 | 80325992 | 80325891 | ID=MS.gene80766.t1.exon15;Parent=MS.gene80766.t1 |
| chr4.4 | CDS | 80325891 | 80325992 | 80325891 | ID=cds.MS.gene80766.t1;Parent=MS.gene80766.t1 |
| chr4.4 | exon | 80326135 | 80326362 | 80326135 | ID=MS.gene80766.t1.exon16;Parent=MS.gene80766.t1 |
| chr4.4 | CDS | 80326135 | 80326362 | 80326135 | ID=cds.MS.gene80766.t1;Parent=MS.gene80766.t1 |
| Gene Sequence |
| Protein sequence |
