Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89421.t1 | XP_013459502.1 | 97.4 | 269 | 7 | 0 | 1 | 269 | 1 | 269 | 6.70E-149 | 536.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89421.t1 | J9U5U9 | 39.6 | 260 | 156 | 1 | 6 | 265 | 3 | 261 | 7.7e-61 | 235.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89421.t1 | A0A072UWT8 | 97.4 | 269 | 7 | 0 | 1 | 269 | 1 | 269 | 4.9e-149 | 536.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene011748 | MS.gene89421 | PPI |
| MS.gene89421 | MS.gene66455 | PPI |
| MS.gene89421 | MS.gene00497 | PPI |
| MS.gene89421 | MS.gene44503 | PPI |
| MS.gene89421 | MS.gene041911 | PPI |
| MS.gene89421 | MS.gene24472 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89421.t1 | MTR_3g045440 | 97.398 | 269 | 7 | 0 | 1 | 269 | 1 | 269 | 0.0 | 545 |
| MS.gene89421.t1 | MTR_6g086560 | 63.498 | 263 | 95 | 1 | 8 | 269 | 17 | 279 | 3.90e-125 | 357 |
| MS.gene89421.t1 | MTR_1g018320 | 38.077 | 260 | 159 | 2 | 7 | 265 | 5 | 263 | 6.72e-73 | 224 |
| MS.gene89421.t1 | MTR_4g095310 | 41.224 | 245 | 142 | 2 | 13 | 256 | 9 | 252 | 1.12e-70 | 219 |
| MS.gene89421.t1 | MTR_5g016150 | 38.367 | 245 | 149 | 2 | 13 | 256 | 9 | 252 | 2.37e-67 | 211 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89421.t1 | AT3G24420 | 50.185 | 271 | 132 | 2 | 1 | 268 | 1 | 271 | 2.81e-104 | 304 |
| MS.gene89421.t1 | AT3G03990 | 38.697 | 261 | 159 | 1 | 5 | 265 | 3 | 262 | 1.05e-75 | 231 |
| MS.gene89421.t1 | AT4G37470 | 42.041 | 245 | 140 | 2 | 13 | 256 | 9 | 252 | 3.43e-71 | 220 |
Find 54 sgRNAs with CRISPR-Local
Find 102 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATAAGCATAGGGCATTATT+TGG | 0.168365 | 3.3:-31924964 | MS.gene89421:CDS |
| AAATAATGCCCTATGCTTAT+TGG | 0.181198 | 3.3:+31924966 | None:intergenic |
| TATTTGGATGAGAACATTAA+AGG | 0.265555 | 3.3:-31924948 | MS.gene89421:CDS |
| TGACATAAAACTATTGTTTC+GGG | 0.281340 | 3.3:+31926222 | None:intergenic |
| ATGACATAAAACTATTGTTT+CGG | 0.322926 | 3.3:+31926221 | None:intergenic |
| TTGGAACAGACCAGTCTATA+TGG | 0.354404 | 3.3:-31926194 | MS.gene89421:CDS |
| TCAACAGAGTCAGCATCATT+TGG | 0.359346 | 3.3:+31925134 | None:intergenic |
| ACAGTCTAGTTCTGTTTGAT+TGG | 0.364702 | 3.3:-31926140 | MS.gene89421:CDS |
| TGATGAGTTAATCACTCTTA+TGG | 0.373825 | 3.3:-31926046 | MS.gene89421:CDS |
| TTTCAGTGACTATAGAGATA+TGG | 0.378657 | 3.3:-31925045 | MS.gene89421:CDS |
| GCTTTCGTATTGAGACTCTA+TGG | 0.399369 | 3.3:+31925190 | None:intergenic |
| ATTTGGATGAGAACATTAAA+GGG | 0.399918 | 3.3:-31924947 | MS.gene89421:CDS |
| TCTGTAATAGCTCCAGAAAA+TGG | 0.417553 | 3.3:+31926117 | None:intergenic |
| CATTAAAGGGGTGTCTACTT+TGG | 0.418244 | 3.3:-31924934 | MS.gene89421:CDS |
| TCATTTGGATCCACTGCAAT+AGG | 0.424577 | 3.3:+31925149 | None:intergenic |
| TAGAGTCTCAATACGAAAGC+TGG | 0.436550 | 3.3:-31925187 | MS.gene89421:CDS |
| CTCATCAGCATAAGGTTCAT+AGG | 0.436848 | 3.3:+31926062 | None:intergenic |
| ACAATCCTCTTAAAGAGCTC+AGG | 0.437679 | 3.3:+31925943 | None:intergenic |
| ATAAATACAGATGACTATAA+AGG | 0.458026 | 3.3:-31925251 | MS.gene89421:CDS |
| CTCAGTTAACTGCACACCTT+AGG | 0.466113 | 3.3:-31924884 | MS.gene89421:CDS |
| CTATAGAGATATGGTTGAAA+AGG | 0.466254 | 3.3:-31925036 | MS.gene89421:CDS |
| CGAGGTGCTGAAGGGTATTG+TGG | 0.466637 | 3.3:-31924856 | MS.gene89421:CDS |
| TGTTTCGGGTCCTGAGCCTA+TGG | 0.470244 | 3.3:+31926236 | None:intergenic |
| CACTCTATGTCTGCTATGAT+AGG | 0.473029 | 3.3:-31925988 | MS.gene89421:CDS |
| TTCTTCTTTGTGCTTCCCCA+AGG | 0.483467 | 3.3:-31925921 | MS.gene89421:intron |
| GTGATTAACTCATCAGCATA+AGG | 0.495421 | 3.3:+31926054 | None:intergenic |
| AATCACTCTTATGGATGAGT+TGG | 0.497837 | 3.3:-31926037 | MS.gene89421:CDS |
| CAACAAAAGTGATACATTTG+AGG | 0.498332 | 3.3:+31926013 | None:intergenic |
| TAGGTTGGTCGAGGTGCTGA+AGG | 0.501148 | 3.3:-31924865 | MS.gene89421:CDS |
| GTGCAGTTAACTGAGGGAAA+TGG | 0.509673 | 3.3:+31924892 | None:intergenic |
| TTGGAGTTTATAGACATGAC+TGG | 0.548171 | 3.3:-31924915 | MS.gene89421:CDS |
| AATGCAAGAACCATAGGCTC+AGG | 0.553052 | 3.3:-31926246 | MS.gene89421:CDS |
| GAAAGCTGGGTTTCAGCATA+CGG | 0.556562 | 3.3:-31925173 | MS.gene89421:CDS |
| TCTTTAAATGCAAGAACCAT+AGG | 0.556752 | 3.3:-31926252 | MS.gene89421:CDS |
| GTGGCAGTTCCAATAAGCAT+AGG | 0.560917 | 3.3:-31924975 | MS.gene89421:CDS |
| ACTTGACTGAATGATTGTGC+AGG | 0.563263 | 3.3:+31925004 | None:intergenic |
| GAGGTGCTGAAGGGTATTGT+GGG | 0.563926 | 3.3:-31924855 | MS.gene89421:CDS |
| AGCATACGGTCCTATTGCAG+TGG | 0.564652 | 3.3:-31925159 | MS.gene89421:CDS |
| TCAGCACCTCGACCAACCTA+AGG | 0.574763 | 3.3:+31924868 | None:intergenic |
| TTGCATTTAAAGATGTTGAG+AGG | 0.576785 | 3.3:+31926262 | None:intergenic |
| AGAGTCTCAATACGAAAGCT+GGG | 0.578249 | 3.3:-31925186 | MS.gene89421:CDS |
| TGGCAGTTCCAATAAGCATA+GGG | 0.586920 | 3.3:-31924974 | MS.gene89421:CDS |
| GTTAACTGCACACCTTAGGT+TGG | 0.595927 | 3.3:-31924880 | MS.gene89421:CDS |
| TTTGGATGAGAACATTAAAG+GGG | 0.595928 | 3.3:-31924946 | MS.gene89421:CDS |
| CTTGACTGAATGATTGTGCA+GGG | 0.604202 | 3.3:+31925005 | None:intergenic |
| TGCACACCTTAGGTTGGTCG+AGG | 0.612843 | 3.3:-31924874 | MS.gene89421:CDS |
| AGGTTGGTCGAGGTGCTGAA+GGG | 0.615703 | 3.3:-31924864 | MS.gene89421:CDS |
| AATACAGATGACTATAAAGG+AGG | 0.635005 | 3.3:-31925248 | MS.gene89421:CDS |
| CATTCAGTCAAGTAATGATG+TGG | 0.635222 | 3.3:-31924994 | MS.gene89421:CDS |
| CTAAGGTGTGCAGTTAACTG+AGG | 0.643140 | 3.3:+31924885 | None:intergenic |
| TAAGGTGTGCAGTTAACTGA+GGG | 0.643687 | 3.3:+31924886 | None:intergenic |
| TGGTGAAGTTGCAATTACCT+TGG | 0.664064 | 3.3:-31925081 | MS.gene89421:CDS |
| AAATGCTTGAAAAGAATGAG+TGG | 0.685359 | 3.3:-31925101 | MS.gene89421:CDS |
| TTGACTGAATGATTGTGCAG+GGG | 0.705699 | 3.3:+31925006 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAACTTTTTAACTATGTTAT+TGG | - | chr3.3:31925587-31925606 | MS.gene89421:intron | 15.0% |
| !!! | TATATTTTGCATGATTATAA+AGG | + | chr3.3:31925048-31925067 | None:intergenic | 15.0% |
| !! | AATTAGTTATTGACAAAACT+CGG | + | chr3.3:31925626-31925645 | None:intergenic | 20.0% |
| !! | ACCTATGAATGAATAATTAT+GGG | + | chr3.3:31925860-31925879 | None:intergenic | 20.0% |
| !! | ATAAATACAGATGACTATAA+AGG | - | chr3.3:31925882-31925901 | MS.gene89421:intron | 20.0% |
| !! | ATGACATAAAACTATTGTTT+CGG | + | chr3.3:31924915-31924934 | None:intergenic | 20.0% |
| !! | TACCTATGAATGAATAATTA+TGG | + | chr3.3:31925861-31925880 | None:intergenic | 20.0% |
| !! | TGTTAAAACACTTGATTATT+TGG | - | chr3.3:31925336-31925355 | MS.gene89421:intron | 20.0% |
| !!! | AAACAATAGTTTTATGTCAT+GGG | - | chr3.3:31924915-31924934 | MS.gene89421:CDS | 20.0% |
| ! | ATTAGTTATTGACAAAACTC+GGG | + | chr3.3:31925625-31925644 | None:intergenic | 25.0% |
| ! | ATTTGGATGAGAACATTAAA+GGG | - | chr3.3:31926186-31926205 | MS.gene89421:CDS | 25.0% |
| ! | GAAATCTCATATTGTGTATT+TGG | - | chr3.3:31925360-31925379 | MS.gene89421:intron | 25.0% |
| ! | TATTTGGATGAGAACATTAA+AGG | - | chr3.3:31926185-31926204 | MS.gene89421:CDS | 25.0% |
| ! | TCCCATAATTATTCATTCAT+AGG | - | chr3.3:31925856-31925875 | MS.gene89421:intron | 25.0% |
| ! | TGACATAAAACTATTGTTTC+GGG | + | chr3.3:31924914-31924933 | None:intergenic | 25.0% |
| !! | AAACATTTGATGGTACAATA+TGG | - | chr3.3:31925806-31925825 | MS.gene89421:intron | 25.0% |
| !! | AACATTTGATGGTACAATAT+GGG | - | chr3.3:31925807-31925826 | MS.gene89421:intron | 25.0% |
| !! | CAATTTTATTCCATATAGAC+TGG | + | chr3.3:31924952-31924971 | None:intergenic | 25.0% |
| !! | CTGTAATTTTCAGTTAAAAG+AGG | + | chr3.3:31924977-31924996 | None:intergenic | 25.0% |
| !!! | GAAACAATAGTTTTATGTCA+TGG | - | chr3.3:31924914-31924933 | MS.gene89421:CDS | 25.0% |
| AAATAATGCCCTATGCTTAT+TGG | + | chr3.3:31926170-31926189 | None:intergenic | 30.0% | |
| AAATGCTTGAAAAGAATGAG+TGG | - | chr3.3:31926032-31926051 | MS.gene89421:CDS | 30.0% | |
| AATACAGATGACTATAAAGG+AGG | - | chr3.3:31925885-31925904 | MS.gene89421:intron | 30.0% | |
| CAACAAAAGTGATACATTTG+AGG | + | chr3.3:31925123-31925142 | None:intergenic | 30.0% | |
| CTATAGAGATATGGTTGAAA+AGG | - | chr3.3:31926097-31926116 | MS.gene89421:CDS | 30.0% | |
| GTACCATCAAATGTTTGAAT+TGG | + | chr3.3:31925802-31925821 | None:intergenic | 30.0% | |
| TCTTTAAATGCAAGAACCAT+AGG | - | chr3.3:31924881-31924900 | MS.gene89421:CDS | 30.0% | |
| TGATGAGTTAATCACTCTTA+TGG | - | chr3.3:31925087-31925106 | MS.gene89421:CDS | 30.0% | |
| TTAGTTATTGACAAAACTCG+GGG | + | chr3.3:31925624-31925643 | None:intergenic | 30.0% | |
| TTGCATTTAAAGATGTTGAG+AGG | + | chr3.3:31924874-31924893 | None:intergenic | 30.0% | |
| TTTCAGTGACTATAGAGATA+TGG | - | chr3.3:31926088-31926107 | MS.gene89421:CDS | 30.0% | |
| TTTGGATGAGAACATTAAAG+GGG | - | chr3.3:31926187-31926206 | MS.gene89421:CDS | 30.0% | |
| ! | AATAAGCATAGGGCATTATT+TGG | - | chr3.3:31926169-31926188 | MS.gene89421:CDS | 30.0% |
| ! | TTTTGTGGAAGGACAAAAAT+AGG | + | chr3.3:31925733-31925752 | None:intergenic | 30.0% |
| !! | CTCAAATGTATCACTTTTGT+TGG | - | chr3.3:31925121-31925140 | MS.gene89421:CDS | 30.0% |
| !!! | AAAGAGCTCAGGTTTTTTAA+TGG | + | chr3.3:31925182-31925201 | None:intergenic | 30.0% |
| !!! | ATAGTTTTATGTCATGGGTT+TGG | - | chr3.3:31924920-31924939 | MS.gene89421:CDS | 30.0% |
| !!! | GTTTAGCATTTCTAGTTTTG+TGG | + | chr3.3:31925748-31925767 | None:intergenic | 30.0% |
| AAAAACCTGAGCTCTTTAAG+AGG | - | chr3.3:31925185-31925204 | MS.gene89421:CDS | 35.0% | |
| AATCACTCTTATGGATGAGT+TGG | - | chr3.3:31925096-31925115 | MS.gene89421:CDS | 35.0% | |
| AGGCCAATTCAAACATTTGA+TGG | - | chr3.3:31925796-31925815 | MS.gene89421:intron | 35.0% | |
| CATTCAGTCAAGTAATGATG+TGG | - | chr3.3:31926139-31926158 | MS.gene89421:CDS | 35.0% | |
| GAAAAACATAGATGTGAGAG+AGG | + | chr3.3:31925685-31925704 | None:intergenic | 35.0% | |
| GTGATTAACTCATCAGCATA+AGG | + | chr3.3:31925082-31925101 | None:intergenic | 35.0% | |
| TAGTTATTGACAAAACTCGG+GGG | + | chr3.3:31925623-31925642 | None:intergenic | 35.0% | |
| TCTGTAATAGCTCCAGAAAA+TGG | + | chr3.3:31925019-31925038 | None:intergenic | 35.0% | |
| TTGGAGTTTATAGACATGAC+TGG | - | chr3.3:31926218-31926237 | MS.gene89421:CDS | 35.0% | |
| ! | ACATCAGAGAGAGTATATGT+AGG | + | chr3.3:31925252-31925271 | None:intergenic | 35.0% |
| ! | ATTTGATGGTACAATATGGG+TGG | - | chr3.3:31925810-31925829 | MS.gene89421:intron | 35.0% |
| ! | GTCACTGAAAAACACAGTTT+TGG | + | chr3.3:31926078-31926097 | None:intergenic | 35.0% |
| ! | TCAAATGTTTGAATTGGCCT+AGG | + | chr3.3:31925796-31925815 | None:intergenic | 35.0% |
| !! | ACAGTCTAGTTCTGTTTGAT+TGG | - | chr3.3:31924993-31925012 | MS.gene89421:CDS | 35.0% |
| !!! | AGCATTTCTAGTTTTGTGGA+AGG | + | chr3.3:31925744-31925763 | None:intergenic | 35.0% |
| !!! | TCACTTTTTTTTCCTAGCCT+AGG | - | chr3.3:31925776-31925795 | MS.gene89421:intron | 35.0% |
| ACAATCCTCTTAAAGAGCTC+AGG | + | chr3.3:31925193-31925212 | None:intergenic | 40.0% | |
| ACTTGACTGAATGATTGTGC+AGG | + | chr3.3:31926132-31926151 | None:intergenic | 40.0% | |
| AGAGTCTCAATACGAAAGCT+GGG | - | chr3.3:31925947-31925966 | MS.gene89421:CDS | 40.0% | |
| CACTCTATGTCTGCTATGAT+AGG | - | chr3.3:31925145-31925164 | MS.gene89421:CDS | 40.0% | |
| CATGTGTTACCGACATATGT+CGG | - | chr3.3:31925491-31925510 | MS.gene89421:intron | 40.0% | |
| CTCATCAGCATAAGGTTCAT+AGG | + | chr3.3:31925074-31925093 | None:intergenic | 40.0% | |
| CTTGACTGAATGATTGTGCA+GGG | + | chr3.3:31926131-31926150 | None:intergenic | 40.0% | |
| GCTTTCGTATTGAGACTCTA+TGG | + | chr3.3:31925946-31925965 | None:intergenic | 40.0% | |
| GTGCACTTCTTTATGTGTTG+TGG | + | chr3.3:31925711-31925730 | None:intergenic | 40.0% | |
| TAAGGTGTGCAGTTAACTGA+GGG | + | chr3.3:31926250-31926269 | None:intergenic | 40.0% | |
| TAGAGTCTCAATACGAAAGC+TGG | - | chr3.3:31925946-31925965 | MS.gene89421:CDS | 40.0% | |
| TAGTGTCAACGTGTTAGTGA+CGG | + | chr3.3:31925428-31925447 | None:intergenic | 40.0% | |
| TCAACAGAGTCAGCATCATT+TGG | + | chr3.3:31926002-31926021 | None:intergenic | 40.0% | |
| TCATTTGGATCCACTGCAAT+AGG | + | chr3.3:31925987-31926006 | None:intergenic | 40.0% | |
| TGGCAGTTCCAATAAGCATA+GGG | - | chr3.3:31926159-31926178 | MS.gene89421:CDS | 40.0% | |
| TGGTGAAGTTGCAATTACCT+TGG | - | chr3.3:31926052-31926071 | MS.gene89421:CDS | 40.0% | |
| TTGACTGAATGATTGTGCAG+GGG | + | chr3.3:31926130-31926149 | None:intergenic | 40.0% | |
| TTGGAACAGACCAGTCTATA+TGG | - | chr3.3:31924939-31924958 | MS.gene89421:CDS | 40.0% | |
| ! | ACACTTTCCATCAGAAGTGT+CGG | - | chr3.3:31925523-31925542 | MS.gene89421:intron | 40.0% |
| ! | GAGAGAGGCTACTTTAAAGA+TGG | + | chr3.3:31925670-31925689 | None:intergenic | 40.0% |
| !! | AGGTAAAGATGAGAGTACCT+TGG | + | chr3.3:31925232-31925251 | None:intergenic | 40.0% |
| !! | CATTAAAGGGGTGTCTACTT+TGG | - | chr3.3:31926199-31926218 | MS.gene89421:CDS | 40.0% |
| !! | CTGTTTGATTGGCCATTTTC+TGG | - | chr3.3:31925004-31925023 | MS.gene89421:CDS | 40.0% |
| !! | GAAAAACACAGTTTTGGCCA+AGG | + | chr3.3:31926072-31926091 | None:intergenic | 40.0% |
| !! | GGTAAAGATGAGAGTACCTT+GGG | + | chr3.3:31925231-31925250 | None:intergenic | 40.0% |
| !! | GTAAAGATGAGAGTACCTTG+GGG | + | chr3.3:31925230-31925249 | None:intergenic | 40.0% |
| !!! | GAGCTCAGGTTTTTTAATGG+AGG | + | chr3.3:31925179-31925198 | None:intergenic | 40.0% |
| !!! | GATGTTGAGAGGCTCTTTTT+TGG | + | chr3.3:31924863-31924882 | None:intergenic | 40.0% |
| AATGCAAGAACCATAGGCTC+AGG | - | chr3.3:31924887-31924906 | MS.gene89421:CDS | 45.0% | |
| CTAAGGTGTGCAGTTAACTG+AGG | + | chr3.3:31926251-31926270 | None:intergenic | 45.0% | |
| CTCAGTTAACTGCACACCTT+AGG | - | chr3.3:31926249-31926268 | MS.gene89421:CDS | 45.0% | |
| GAAAGCTGGGTTTCAGCATA+CGG | - | chr3.3:31925960-31925979 | MS.gene89421:CDS | 45.0% | |
| GTCTGATGTCCGACATATGT+CGG | + | chr3.3:31925503-31925522 | None:intergenic | 45.0% | |
| GTGCAGTTAACTGAGGGAAA+TGG | + | chr3.3:31926244-31926263 | None:intergenic | 45.0% | |
| GTGGCAGTTCCAATAAGCAT+AGG | - | chr3.3:31926158-31926177 | MS.gene89421:CDS | 45.0% | |
| GTTAACTGCACACCTTAGGT+TGG | - | chr3.3:31926253-31926272 | MS.gene89421:CDS | 45.0% | |
| TTCTTCTTTGTGCTTCCCCA+AGG | - | chr3.3:31925212-31925231 | MS.gene89421:CDS | 45.0% | |
| ! | TGTTTGAATTGGCCTAGGCT+AGG | + | chr3.3:31925791-31925810 | None:intergenic | 45.0% |
| !! | GTGTCGGTGCTACAAAGATT+TGG | - | chr3.3:31925539-31925558 | MS.gene89421:intron | 45.0% |
| AGCATACGGTCCTATTGCAG+TGG | - | chr3.3:31925974-31925993 | MS.gene89421:CDS | 50.0% | |
| !! | GAGGTGCTGAAGGGTATTGT+GGG | - | chr3.3:31926278-31926297 | MS.gene89421:CDS | 50.0% |
| !! | TGTAGCACCGACACTTCTGA+TGG | + | chr3.3:31925533-31925552 | None:intergenic | 50.0% |
| TCAGCACCTCGACCAACCTA+AGG | + | chr3.3:31926268-31926287 | None:intergenic | 55.0% | |
| ! | TGTTTCGGGTCCTGAGCCTA+TGG | + | chr3.3:31924900-31924919 | None:intergenic | 55.0% |
| !! | AGGTTGGTCGAGGTGCTGAA+GGG | - | chr3.3:31926269-31926288 | MS.gene89421:CDS | 55.0% |
| !! | CGAGGTGCTGAAGGGTATTG+TGG | - | chr3.3:31926277-31926296 | MS.gene89421:CDS | 55.0% |
| !! | TAGGTTGGTCGAGGTGCTGA+AGG | - | chr3.3:31926268-31926287 | MS.gene89421:CDS | 55.0% |
| !! | TGCACACCTTAGGTTGGTCG+AGG | - | chr3.3:31926259-31926278 | MS.gene89421:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 31924851 | 31926304 | 31924851 | ID=MS.gene89421 |
| chr3.3 | mRNA | 31924851 | 31926304 | 31924851 | ID=MS.gene89421.t1;Parent=MS.gene89421 |
| chr3.3 | exon | 31925922 | 31926304 | 31925922 | ID=MS.gene89421.t1.exon1;Parent=MS.gene89421.t1 |
| chr3.3 | CDS | 31925922 | 31926304 | 31925922 | ID=cds.MS.gene89421.t1;Parent=MS.gene89421.t1 |
| chr3.3 | exon | 31924851 | 31925277 | 31924851 | ID=MS.gene89421.t1.exon2;Parent=MS.gene89421.t1 |
| chr3.3 | CDS | 31924851 | 31925277 | 31924851 | ID=cds.MS.gene89421.t1;Parent=MS.gene89421.t1 |
| Gene Sequence |
| Protein sequence |
