Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89570.t1 | XP_024635315.1 | 99.5 | 421 | 2 | 0 | 1 | 421 | 1 | 421 | 2.50E-230 | 807.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89570.t1 | Q6K9N6 | 86.2 | 419 | 58 | 0 | 1 | 419 | 1 | 419 | 2.3e-205 | 716.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89570.t1 | A0A072VL01 | 99.5 | 421 | 2 | 0 | 1 | 421 | 1 | 421 | 1.8e-230 | 807.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050116 | MS.gene89570 | 0.843018 | 1.81E-58 | -1.69E-46 |
| MS.gene051809 | MS.gene89570 | 0.813848 | 2.08E-51 | -1.69E-46 |
| MS.gene057213 | MS.gene89570 | 0.848244 | 6.93E-60 | -1.69E-46 |
| MS.gene058638 | MS.gene89570 | 0.821233 | 4.50E-53 | -1.69E-46 |
| MS.gene058639 | MS.gene89570 | 0.8099 | 1.51E-50 | -1.69E-46 |
| MS.gene058758 | MS.gene89570 | 0.812069 | 5.10E-51 | -1.69E-46 |
| MS.gene05880 | MS.gene89570 | 0.831151 | 1.96E-55 | -1.69E-46 |
| MS.gene06117 | MS.gene89570 | 0.804809 | 1.81E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89570.t1 | MTR_1g069645 | 99.525 | 421 | 2 | 0 | 1 | 421 | 1 | 421 | 0.0 | 848 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89570.t1 | AT2G20420 | 85.885 | 418 | 59 | 0 | 2 | 419 | 1 | 418 | 0.0 | 747 |
Find 82 sgRNAs with CRISPR-Local
Find 309 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGTTTGAATATCTCTTTC+TGG | 0.175075 | 1.1:-51483199 | None:intergenic |
| GCTTATTATTGCTTGTAAAA+AGG | 0.207735 | 1.1:+51482723 | MS.gene89570:intron |
| AAGGCAGATTTAAATTATAT+TGG | 0.212296 | 1.1:+51484148 | MS.gene89570:CDS |
| TGACAAAGTGAAGGCTATTT+TGG | 0.228396 | 1.1:+51484582 | MS.gene89570:CDS |
| ATTGGGTTAGATGGAGAAAT+TGG | 0.248780 | 1.1:+51484166 | MS.gene89570:CDS |
| TTAAATTATATTGGGTTAGA+TGG | 0.259385 | 1.1:+51484157 | MS.gene89570:CDS |
| ATTTCCAGACATGATTATTA+AGG | 0.260056 | 1.1:+51482777 | MS.gene89570:CDS |
| TGATTCTGACTGCACTCTTT+TGG | 0.271327 | 1.1:+51483001 | MS.gene89570:CDS |
| TGATTTCTATCAGCCACTTT+AGG | 0.310229 | 1.1:-51482939 | None:intergenic |
| ATTAATAACGGCTGAAGATT+TGG | 0.314200 | 1.1:+51485269 | MS.gene89570:CDS |
| GCTGAATTGATGAGCAAATA+TGG | 0.315960 | 1.1:+51480832 | MS.gene89570:CDS |
| AGGCAGATTTAAATTATATT+GGG | 0.326373 | 1.1:+51484149 | MS.gene89570:CDS |
| ACCACCGACATCCAGAAAAT+TGG | 0.337667 | 1.1:-51484260 | None:intergenic |
| CCTTCAAGACGAACTATTAC+TGG | 0.352447 | 1.1:-51485084 | None:intergenic |
| TTAGCCGGTGGACGAGGATT+GGG | 0.369874 | 1.1:+51481319 | MS.gene89570:CDS |
| ACCGGGGAATGCATCTTTGA+TGG | 0.376142 | 1.1:-51480908 | None:intergenic |
| TGCAAAGGTTGTTGATGGTT+TGG | 0.380876 | 1.1:+51482914 | MS.gene89570:CDS |
| TGAGGAAACCGCTACGCCTC+TGG | 0.390330 | 1.1:-51480866 | None:intergenic |
| TCTCAACATCCACGAGTATC+AGG | 0.395102 | 1.1:+51480676 | MS.gene89570:CDS |
| TACAAAACAGTCAGGTCCTC+AGG | 0.399292 | 1.1:+51481670 | MS.gene89570:CDS |
| TTCTGCAAGGTCTTCAATGC+TGG | 0.400023 | 1.1:-51482752 | None:intergenic |
| TTTAGCCGGTGGACGAGGAT+TGG | 0.412502 | 1.1:+51481318 | MS.gene89570:CDS |
| CTCTCTCCGTCGCCGGCACA+TGG | 0.417809 | 1.1:+51480633 | MS.gene89570:CDS |
| CCAGTAATAGTTCGTCTTGA+AGG | 0.437190 | 1.1:+51485084 | MS.gene89570:CDS |
| AATGTACTTTGCTATAACTC+TGG | 0.458552 | 1.1:+51482511 | MS.gene89570:CDS |
| CAAACCTTAATAATCATGTC+TGG | 0.470096 | 1.1:-51482781 | None:intergenic |
| GATGCTGCAAAGGTTGTTGA+TGG | 0.481004 | 1.1:+51482909 | MS.gene89570:CDS |
| GGCTGCATGGTGAATGGAGC+AGG | 0.482177 | 1.1:+51484187 | MS.gene89570:CDS |
| GGATCGTAAGACTGCTGGTC+CGG | 0.485726 | 1.1:+51482532 | MS.gene89570:CDS |
| TAGCATCAGCAGCTACTAGT+TGG | 0.488406 | 1.1:-51483145 | None:intergenic |
| TTATCAGCTGTCTCCGCCAT+GGG | 0.493856 | 1.1:-51483122 | None:intergenic |
| GTTATCAGCTGTCTCCGCCA+TGG | 0.498469 | 1.1:-51483123 | None:intergenic |
| GAAGGCACCAATGTTGATCA+AGG | 0.499839 | 1.1:+51485102 | MS.gene89570:CDS |
| GGATCAGGTGGCTGCTGCAA+AGG | 0.506091 | 1.1:+51484129 | MS.gene89570:intron |
| AATAGTGAATGCTGCAAAGC+AGG | 0.513542 | 1.1:+51484651 | MS.gene89570:CDS |
| GCCATCAAAGATGCATTCCC+CGG | 0.516361 | 1.1:+51480907 | MS.gene89570:CDS |
| GAAATTGGCTGCATGGTGAA+TGG | 0.525680 | 1.1:+51484181 | MS.gene89570:CDS |
| GAGGAAACCGCTACGCCTCT+GGG | 0.528679 | 1.1:-51480865 | None:intergenic |
| CTGTTGATTCTGCCATGTGC+CGG | 0.536899 | 1.1:-51480645 | None:intergenic |
| TGATGGTTTGGCTCCTAAAG+TGG | 0.542936 | 1.1:+51482926 | MS.gene89570:CDS |
| ACTCTGGATCGTAAGACTGC+TGG | 0.543398 | 1.1:+51482527 | MS.gene89570:CDS |
| AAGTGGTATGGCATTAATAA+CGG | 0.545339 | 1.1:+51485257 | MS.gene89570:CDS |
| TAGCCGGTGGACGAGGATTG+GGG | 0.546458 | 1.1:+51481320 | MS.gene89570:CDS |
| TCTCGCTCTCTCTCCGTCGC+CGG | 0.547633 | 1.1:+51480626 | MS.gene89570:CDS |
| GTTTCAACAGGAAAGTGGTA+TGG | 0.559539 | 1.1:+51485245 | MS.gene89570:intron |
| AGCCTTCACTTTGTCATCAG+CGG | 0.561020 | 1.1:-51484575 | None:intergenic |
| AGTCCCCAATCCTCGTCCAC+CGG | 0.563023 | 1.1:-51481323 | None:intergenic |
| TGGTGCTGCCTCTGAAAACC+AGG | 0.565708 | 1.1:+51484279 | MS.gene89570:CDS |
| ATACTAGTTACAAAACAGTC+AGG | 0.567777 | 1.1:+51481662 | MS.gene89570:CDS |
| TGAATGTTTCAACAGGAAAG+TGG | 0.569848 | 1.1:+51485240 | MS.gene89570:intron |
| ATTCTGCCATGTGCCGGCGA+CGG | 0.571062 | 1.1:-51480639 | None:intergenic |
| GACCAGGTTGAAGATATAGC+TGG | 0.576329 | 1.1:+51481388 | MS.gene89570:CDS |
| AAGTGTGATGTTATAGCAAG+TGG | 0.576361 | 1.1:+51484628 | MS.gene89570:CDS |
| ATGGATATAATTAAGTTGCA+TGG | 0.580190 | 1.1:+51484226 | MS.gene89570:CDS |
| CAACTTAATTATATCCATTG+TGG | 0.580693 | 1.1:-51484221 | None:intergenic |
| TACTGATGAAGATGCTGCAA+AGG | 0.593207 | 1.1:+51482899 | MS.gene89570:CDS |
| ACAAAACAGTCAGGTCCTCA+GGG | 0.599578 | 1.1:+51481671 | MS.gene89570:CDS |
| GGATTGGGGACTTTCAAAAG+TGG | 0.603342 | 1.1:+51481334 | MS.gene89570:CDS |
| ACTTCGTGATACAACACAAG+AGG | 0.604434 | 1.1:+51483217 | MS.gene89570:CDS |
| TAACGTTCCCAGAGGCGTAG+CGG | 0.610301 | 1.1:+51480858 | MS.gene89570:CDS |
| TCTTTCACAGATCAATCCCA+TGG | 0.610578 | 1.1:+51483106 | MS.gene89570:intron |
| GCATTTAACTATACCTCTCG+AGG | 0.610638 | 1.1:-51483242 | None:intergenic |
| TCAAGGGAAAAGCATTCTGA+AGG | 0.611993 | 1.1:+51485119 | MS.gene89570:CDS |
| TATCTCTTTCTGGCGATATG+CGG | 0.620041 | 1.1:-51483189 | None:intergenic |
| AACCGCTGATGACAAAGTGA+AGG | 0.621215 | 1.1:+51484573 | MS.gene89570:CDS |
| AGATGGAGAAATTGGCTGCA+TGG | 0.622314 | 1.1:+51484174 | MS.gene89570:CDS |
| AAGGCACCAATGTTGATCAA+GGG | 0.623746 | 1.1:+51485103 | MS.gene89570:CDS |
| CCGACATCCAGAAAATTGGC+AGG | 0.624013 | 1.1:-51484256 | None:intergenic |
| TGCATTCCCCGGTCAAAACG+AGG | 0.636965 | 1.1:+51480918 | MS.gene89570:CDS |
| AGGGTTAGCAATGGCCACAA+TGG | 0.643855 | 1.1:+51484207 | MS.gene89570:CDS |
| CGAGAGGGACCTGATACTCG+TGG | 0.643858 | 1.1:-51480685 | None:intergenic |
| ACCCTAACAACAATGGTCAG+AGG | 0.649848 | 1.1:+51480584 | None:intergenic |
| GAATGGAGCAGGGTTAGCAA+TGG | 0.649914 | 1.1:+51484198 | MS.gene89570:CDS |
| GCACATTGTTAAGACTGACC+AGG | 0.652128 | 1.1:+51481372 | MS.gene89570:CDS |
| TACCAGCTATATCTTCAACC+TGG | 0.653753 | 1.1:-51481390 | None:intergenic |
| GATACTCGTGGATGTTGAGA+CGG | 0.670255 | 1.1:-51480673 | None:intergenic |
| AACACAAGAGGATCCTCGAG+AGG | 0.699355 | 1.1:+51483229 | MS.gene89570:CDS |
| ACTCGTGGATGTTGAGACGG+CGG | 0.714705 | 1.1:-51480670 | None:intergenic |
| GATATAATTAAGTTGCATGG+CGG | 0.729232 | 1.1:+51484229 | MS.gene89570:CDS |
| GCTGCATGGTGAATGGAGCA+GGG | 0.729760 | 1.1:+51484188 | MS.gene89570:CDS |
| TTCACAGATCAATCCCATGG+CGG | 0.738791 | 1.1:+51483109 | MS.gene89570:intron |
| TATGGAGTTAACGTTCCCAG+AGG | 0.766145 | 1.1:+51480850 | MS.gene89570:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAAAATAAAATAAAAAA+AGG | - | chr1.1:51485000-51485019 | None:intergenic | 0.0% |
| !! | AATAAATTAATACTTATGAA+TGG | - | chr1.1:51481504-51481523 | None:intergenic | 10.0% |
| !!! | AAAATAAGATTTTAATAATC+AGG | - | chr1.1:51484036-51484055 | None:intergenic | 10.0% |
| !! | AAAAAAATAAATAATCCAGT+TGG | - | chr1.1:51482115-51482134 | None:intergenic | 15.0% |
| !! | TGTAAAAAAAATTAGACAAT+TGG | - | chr1.1:51482455-51482474 | None:intergenic | 15.0% |
| !! | TTATTATTGGTCAAATTTAA+AGG | - | chr1.1:51482660-51482679 | None:intergenic | 15.0% |
| !!! | AATTGTCTAATTTTTTTTAC+AGG | + | chr1.1:51482454-51482473 | MS.gene89570:intron | 15.0% |
| !!! | ATTAAAACATTTTGCAATTA+TGG | - | chr1.1:51481090-51481109 | None:intergenic | 15.0% |
| !!! | TATTTTATTTTAAAAGCACT+GGG | + | chr1.1:51485005-51485024 | MS.gene89570:intron | 15.0% |
| !!! | TTATTTTATTTTAAAAGCAC+TGG | + | chr1.1:51485004-51485023 | MS.gene89570:intron | 15.0% |
| !!! | TTTAAAATAAAATGGAAGAT+CGG | - | chr1.1:51482328-51482347 | None:intergenic | 15.0% |
| !!! | TTTTTTGGTGATTTTTTTTT+TGG | + | chr1.1:51481572-51481591 | MS.gene89570:intron | 15.0% |
| !!! | TTTTTTTGTTTAACTAATTG+AGG | + | chr1.1:51481046-51481065 | MS.gene89570:intron | 15.0% |
| !! | AAGGCAGATTTAAATTATAT+TGG | + | chr1.1:51484148-51484167 | MS.gene89570:CDS | 20.0% |
| !! | ACTATATAAAACTGCTAATA+AGG | - | chr1.1:51484808-51484827 | None:intergenic | 20.0% |
| !! | AGGCAGATTTAAATTATATT+GGG | + | chr1.1:51484149-51484168 | MS.gene89570:CDS | 20.0% |
| !! | ATAAAGTAATATACTGACAT+AGG | - | chr1.1:51482565-51482584 | None:intergenic | 20.0% |
| !! | CAAAATAATAACCCAATATT+TGG | - | chr1.1:51483605-51483624 | None:intergenic | 20.0% |
| !! | CATCTTATATAGAATTAGAA+AGG | - | chr1.1:51481476-51481495 | None:intergenic | 20.0% |
| !! | CTTATTATTGCTTGTAAAAA+GGG | + | chr1.1:51482724-51482743 | MS.gene89570:CDS | 20.0% |
| !! | TATACACTTAAAACCATTTA+TGG | + | chr1.1:51482170-51482189 | MS.gene89570:intron | 20.0% |
| !! | TATTCAATTTGAATTTAGAG+AGG | + | chr1.1:51481520-51481539 | MS.gene89570:intron | 20.0% |
| !! | TTAAAACCATTTATGGTATT+TGG | + | chr1.1:51482177-51482196 | MS.gene89570:intron | 20.0% |
| !! | TTAAAATAAAATGGAAGATC+GGG | - | chr1.1:51482327-51482346 | None:intergenic | 20.0% |
| !! | TTACTATAATTATGTGAATC+AGG | + | chr1.1:51484528-51484547 | MS.gene89570:intron | 20.0% |
| !!! | AAAATGTTTTAATGCATGTT+TGG | + | chr1.1:51481097-51481116 | MS.gene89570:intron | 20.0% |
| !!! | AAAGTTTAGTCATTTTTTTC+TGG | + | chr1.1:51481967-51481986 | MS.gene89570:intron | 20.0% |
| !!! | ACTTGATAATCTAGATTTTT+TGG | + | chr1.1:51481557-51481576 | MS.gene89570:intron | 20.0% |
| !!! | AGAATAAAGCTGTTTTTAAA+CGG | - | chr1.1:51484719-51484738 | None:intergenic | 20.0% |
| !!! | AGTATAACCTTTAAAATTCA+CGG | - | chr1.1:51481158-51481177 | None:intergenic | 20.0% |
| !!! | ATTTCTGTTTTATATTACAC+AGG | + | chr1.1:51483271-51483290 | MS.gene89570:intron | 20.0% |
| !!! | ATTTTATTTTAAAAGCACTG+GGG | + | chr1.1:51485006-51485025 | MS.gene89570:intron | 20.0% |
| !!! | GTATGCGTTTTAAAATAAAA+TGG | - | chr1.1:51482336-51482355 | None:intergenic | 20.0% |
| !!! | TAATCTTGCTGTTATTTTTT+AGG | + | chr1.1:51485047-51485066 | MS.gene89570:intron | 20.0% |
| !!! | TGTGTCTTTTAACTTTTTTT+TGG | + | chr1.1:51484108-51484127 | MS.gene89570:intron | 20.0% |
| !!! | TTAAATTATATTGGGTTAGA+TGG | + | chr1.1:51484157-51484176 | MS.gene89570:CDS | 20.0% |
| !!! | TTATTAGCAGTTTTATATAG+TGG | + | chr1.1:51484807-51484826 | MS.gene89570:intron | 20.0% |
| !!! | TTTATATAGTGGTTTTTGTT+TGG | + | chr1.1:51484818-51484837 | MS.gene89570:intron | 20.0% |
| !!! | TTTCAATTTTCGTGAAATTA+GGG | + | chr1.1:51480808-51480827 | MS.gene89570:intron | 20.0% |
| !!! | TTTTAACTTTTTTTTGGATC+AGG | + | chr1.1:51484114-51484133 | MS.gene89570:intron | 20.0% |
| !!! | TTTTAGAGAACAAAATTGTT+TGG | - | chr1.1:51481766-51481785 | None:intergenic | 20.0% |
| !!! | TTTTCAATTTTCGTGAAATT+AGG | + | chr1.1:51480807-51480826 | MS.gene89570:intron | 20.0% |
| ! | AAATACATCATGTGAAATCT+TGG | - | chr1.1:51484010-51484029 | None:intergenic | 25.0% |
| ! | AACTGATGATAAGAAACAAA+AGG | - | chr1.1:51484065-51484084 | None:intergenic | 25.0% |
| ! | AATATGAACAAAAACATCTC+AGG | - | chr1.1:51484509-51484528 | None:intergenic | 25.0% |
| ! | ATACGTAGAATATATATGCA+AGG | + | chr1.1:51482392-51482411 | MS.gene89570:intron | 25.0% |
| ! | ATATGAACAAAAACATCTCA+GGG | - | chr1.1:51484508-51484527 | None:intergenic | 25.0% |
| ! | ATTTCCAGACATGATTATTA+AGG | + | chr1.1:51482777-51482796 | MS.gene89570:CDS | 25.0% |
| ! | CAACTTAATTATATCCATTG+TGG | - | chr1.1:51484224-51484243 | None:intergenic | 25.0% |
| ! | GCAACATAGATGTTTATTAT+TGG | - | chr1.1:51482673-51482692 | None:intergenic | 25.0% |
| ! | GCTTATTATTGCTTGTAAAA+AGG | + | chr1.1:51482723-51482742 | MS.gene89570:intron | 25.0% |
| ! | TACGTAGAATATATATGCAA+GGG | + | chr1.1:51482393-51482412 | MS.gene89570:intron | 25.0% |
| ! | TATATAGAATTAGAAAGGCA+TGG | - | chr1.1:51481471-51481490 | None:intergenic | 25.0% |
| ! | TATGGAAAACTTCATAACAA+AGG | - | chr1.1:51481072-51481091 | None:intergenic | 25.0% |
| ! | TGGAACTATTTGATATTGAA+AGG | + | chr1.1:51484838-51484857 | MS.gene89570:intron | 25.0% |
| ! | TTTGAATTTAGAGAGGTTAT+AGG | + | chr1.1:51481527-51481546 | MS.gene89570:intron | 25.0% |
| !! | AACATCTTTTGTAACAATCA+GGG | + | chr1.1:51483438-51483457 | MS.gene89570:intron | 25.0% |
| !! | ATGGATATAATTAAGTTGCA+TGG | + | chr1.1:51484226-51484245 | MS.gene89570:CDS | 25.0% |
| !! | TAGCTTTTACAAAATCACAA+TGG | + | chr1.1:51481181-51481200 | MS.gene89570:intron | 25.0% |
| !! | TATTTGAAATTTACACCCTT+TGG | + | chr1.1:51481864-51481883 | MS.gene89570:intron | 25.0% |
| !! | TTCTCTAAAAATCGAAATTC+TGG | + | chr1.1:51481776-51481795 | MS.gene89570:intron | 25.0% |
| !!! | ACAAACCATCTCTTTTAAAA+AGG | + | chr1.1:51485171-51485190 | MS.gene89570:intron | 25.0% |
| !!! | ATGGTTTTAAGTGTATAACT+TGG | - | chr1.1:51482167-51482186 | None:intergenic | 25.0% |
| !!! | ATTGGGTTATTATTTTGACA+AGG | + | chr1.1:51483608-51483627 | MS.gene89570:intron | 25.0% |
| !!! | TGGTGATTTTTTTTTTGGTT+TGG | + | chr1.1:51481577-51481596 | MS.gene89570:intron | 25.0% |
| !!! | TTAATTTTGATCTATGACGT+GGG | + | chr1.1:51484914-51484933 | MS.gene89570:intron | 25.0% |
| !!! | TTGTCATTGTTGTTTTTTCA+GGG | + | chr1.1:51481624-51481643 | MS.gene89570:intron | 25.0% |
| !!! | TTTAATTTTGATCTATGACG+TGG | + | chr1.1:51484913-51484932 | MS.gene89570:intron | 25.0% |
| !!! | TTTGTCATTGTTGTTTTTTC+AGG | + | chr1.1:51481623-51481642 | MS.gene89570:intron | 25.0% |
| AAAAACCACTTGGAATCTAA+CGG | - | chr1.1:51482236-51482255 | None:intergenic | 30.0% | |
| AACCATTTATGGTATTTGGT+AGG | + | chr1.1:51482181-51482200 | MS.gene89570:intron | 30.0% | |
| AAGTGGTATGGCATTAATAA+CGG | + | chr1.1:51485257-51485276 | MS.gene89570:CDS | 30.0% | |
| AATTATGGTCTACAGAATCA+TGG | - | chr1.1:51480948-51480967 | None:intergenic | 30.0% | |
| AATTGTCCTGGATAAAATGT+TGG | + | chr1.1:51483642-51483661 | MS.gene89570:intron | 30.0% | |
| ACGTAGAATATATATGCAAG+GGG | + | chr1.1:51482394-51482413 | MS.gene89570:intron | 30.0% | |
| ACTACAAACTGATGTGATAT+AGG | - | chr1.1:51484385-51484404 | None:intergenic | 30.0% | |
| ATAAAAACCCTCTGAATTTC+AGG | - | chr1.1:51484423-51484442 | None:intergenic | 30.0% | |
| ATACTAGTTACAAAACAGTC+AGG | + | chr1.1:51481662-51481681 | MS.gene89570:CDS | 30.0% | |
| ATGGACATGAAATGAAAACA+AGG | - | chr1.1:51481452-51481471 | None:intergenic | 30.0% | |
| ATTAATAACGGCTGAAGATT+TGG | + | chr1.1:51485269-51485288 | MS.gene89570:CDS | 30.0% | |
| ATTATTGCTTGTAAAAAGGG+AGG | + | chr1.1:51482727-51482746 | MS.gene89570:CDS | 30.0% | |
| ATTGAACTGAGAAACAACAA+AGG | - | chr1.1:51481426-51481445 | None:intergenic | 30.0% | |
| CAAACCTTAATAATCATGTC+TGG | - | chr1.1:51482784-51482803 | None:intergenic | 30.0% | |
| CTATAATTATGTGAATCAGG+TGG | + | chr1.1:51484531-51484550 | MS.gene89570:intron | 30.0% | |
| CTGCATGTAAACCAAATATT+GGG | + | chr1.1:51483591-51483610 | MS.gene89570:intron | 30.0% | |
| GAAGTTTGAATATCTCTTTC+TGG | - | chr1.1:51483202-51483221 | None:intergenic | 30.0% | |
| TCTGCATGTAAACCAAATAT+TGG | + | chr1.1:51483590-51483609 | MS.gene89570:intron | 30.0% | |
| TCTTTCTCCTACATATGATA+GGG | + | chr1.1:51484736-51484755 | MS.gene89570:intron | 30.0% | |
| TGATCAATACAAAAACCACT+TGG | - | chr1.1:51482246-51482265 | None:intergenic | 30.0% | |
| TGTAAAGAAAAAAAGTCCCA+CGG | - | chr1.1:51481896-51481915 | None:intergenic | 30.0% | |
| TGTATGTAGCTAATTAAGCT+AGG | - | chr1.1:51483890-51483909 | None:intergenic | 30.0% | |
| TTCATTGTGAATGTTTCAAC+AGG | + | chr1.1:51485233-51485252 | MS.gene89570:intron | 30.0% | |
| TTCTTTCTCCTACATATGAT+AGG | + | chr1.1:51484735-51484754 | MS.gene89570:intron | 30.0% | |
| TTGAACTGAGAAACAACAAA+GGG | - | chr1.1:51481425-51481444 | None:intergenic | 30.0% | |
| TTGTGCTTATGATACAGTTA+TGG | + | chr1.1:51483795-51483814 | MS.gene89570:intron | 30.0% | |
| TTTACATGCAATATGTCTGT+CGG | + | chr1.1:51481910-51481929 | MS.gene89570:intron | 30.0% | |
| ! | AATGTACTTTGCTATAACTC+TGG | + | chr1.1:51482511-51482530 | MS.gene89570:CDS | 30.0% |
| ! | ACTTTCAAAAGTGGTTTTCA+GGG | + | chr1.1:51481343-51481362 | MS.gene89570:CDS | 30.0% |
| ! | CATTTTATCCAGGACAATTT+TGG | - | chr1.1:51483641-51483660 | None:intergenic | 30.0% |
| ! | GAACATCTTTTGTAACAATC+AGG | + | chr1.1:51483437-51483456 | MS.gene89570:intron | 30.0% |
| ! | GATATAATTAAGTTGCATGG+CGG | + | chr1.1:51484229-51484248 | MS.gene89570:CDS | 30.0% |
| ! | GGAAGTAAATTTTCGTCAAT+TGG | + | chr1.1:51482267-51482286 | MS.gene89570:intron | 30.0% |
| !! | AAACGGCATCAATTTTGTTT+TGG | - | chr1.1:51484702-51484721 | None:intergenic | 30.0% |
| !! | AGTGGTTTTTGTATTGATCA+TGG | + | chr1.1:51482246-51482265 | MS.gene89570:intron | 30.0% |
| !! | GTTAAGAGTCAAATTTTAGC+CGG | + | chr1.1:51481304-51481323 | MS.gene89570:CDS | 30.0% |
| !! | TGCTTCCTTTTTAAAAGAGA+TGG | - | chr1.1:51485179-51485198 | None:intergenic | 30.0% |
| !!! | ATTTTGGTTAACATCTTTGG+TGG | + | chr1.1:51484598-51484617 | MS.gene89570:CDS | 30.0% |
| !!! | GCTTTTGAAGTTTTGATATC+CGG | + | chr1.1:51483931-51483950 | MS.gene89570:intron | 30.0% |
| !!! | TAACTTTTTTTTGGATCAGG+TGG | + | chr1.1:51484117-51484136 | MS.gene89570:intron | 30.0% |
| !!! | TTTTTTTAAAAGTGGCCAAC+TGG | + | chr1.1:51482130-51482149 | MS.gene89570:intron | 30.0% |
| AAGTGTGATGTTATAGCAAG+TGG | + | chr1.1:51484628-51484647 | MS.gene89570:CDS | 35.0% | |
| ACATATGATAGGGAATGAAC+AGG | + | chr1.1:51484746-51484765 | MS.gene89570:intron | 35.0% | |
| ACATTGATGCTTTCGATATC+TGG | + | chr1.1:51483769-51483788 | MS.gene89570:intron | 35.0% | |
| ACCCAACCCAAAAATATATC+AGG | - | chr1.1:51483364-51483383 | None:intergenic | 35.0% | |
| AGATACCACCTTCAATGATT+TGG | + | chr1.1:51484476-51484495 | MS.gene89570:intron | 35.0% | |
| AGCCTACCAAATACCATAAA+TGG | - | chr1.1:51482186-51482205 | None:intergenic | 35.0% | |
| AGTCCTTCAAAAACATCAAC+AGG | - | chr1.1:51482879-51482898 | None:intergenic | 35.0% | |
| ATGTACAGTGAAATAAACGC+AGG | - | chr1.1:51483753-51483772 | None:intergenic | 35.0% | |
| CATATGATAGGGAATGAACA+GGG | + | chr1.1:51484747-51484766 | MS.gene89570:intron | 35.0% | |
| CCCAACCCAAAAATATATCA+GGG | - | chr1.1:51483363-51483382 | None:intergenic | 35.0% | |
| CGTAGAATATATATGCAAGG+GGG | + | chr1.1:51482395-51482414 | MS.gene89570:intron | 35.0% | |
| CTTATGATACAGTTATGGAG+TGG | + | chr1.1:51483800-51483819 | MS.gene89570:intron | 35.0% | |
| CTTGTCTGTAATACATTACC+TGG | - | chr1.1:51484300-51484319 | None:intergenic | 35.0% | |
| GATGTTCTACAATATTGTGC+AGG | - | chr1.1:51483424-51483443 | None:intergenic | 35.0% | |
| GCATTAACCTGAAATTCAGA+GGG | + | chr1.1:51484413-51484432 | MS.gene89570:intron | 35.0% | |
| GCTGAATTGATGAGCAAATA+TGG | + | chr1.1:51480832-51480851 | MS.gene89570:CDS | 35.0% | |
| GTTACTCTTGACATTTCTCT+GGG | + | chr1.1:51482803-51482822 | MS.gene89570:intron | 35.0% | |
| GTTCATTCCCTATCATATGT+AGG | - | chr1.1:51484746-51484765 | None:intergenic | 35.0% | |
| GTTGGGTTCAATTCACATTT+CGG | + | chr1.1:51483377-51483396 | MS.gene89570:intron | 35.0% | |
| TACTGACATAGGAAACTTAC+CGG | - | chr1.1:51482554-51482573 | None:intergenic | 35.0% | |
| TAGTGAGTAGCAACAACTAA+AGG | - | chr1.1:51484457-51484476 | None:intergenic | 35.0% | |
| TATGACGTGGGTTTAGATAT+TGG | + | chr1.1:51484926-51484945 | MS.gene89570:intron | 35.0% | |
| TCAGGGAAAAATTGTTAGCA+AGG | + | chr1.1:51481688-51481707 | MS.gene89570:CDS | 35.0% | |
| TGAATAAACGAATCTCGAGA+GGG | - | chr1.1:51480703-51480722 | None:intergenic | 35.0% | |
| TGAATGTTTCAACAGGAAAG+TGG | + | chr1.1:51485240-51485259 | MS.gene89570:intron | 35.0% | |
| TGTATAAGACAGGATGAGAT+GGG | - | chr1.1:51483696-51483715 | None:intergenic | 35.0% | |
| TGTTACTCTTGACATTTCTC+TGG | + | chr1.1:51482802-51482821 | MS.gene89570:intron | 35.0% | |
| TTAAAATTCACGGTAGCTCA+CGG | - | chr1.1:51481148-51481167 | None:intergenic | 35.0% | |
| TTGGATAACATATGTCCAGT+TGG | - | chr1.1:51482148-51482167 | None:intergenic | 35.0% | |
| TTGGGTTCAATTCACATTTC+GGG | + | chr1.1:51483378-51483397 | MS.gene89570:intron | 35.0% | |
| ! | AGACAAGATTGCTCTCATTT+TGG | + | chr1.1:51484313-51484332 | MS.gene89570:intron | 35.0% |
| ! | ATGCATTCCTTCTTTCTAGT+AGG | + | chr1.1:51482851-51482870 | MS.gene89570:intron | 35.0% |
| ! | ATTGGGTTAGATGGAGAAAT+TGG | + | chr1.1:51484166-51484185 | MS.gene89570:CDS | 35.0% |
| ! | CACAATCCAACATTTTATCC+AGG | - | chr1.1:51483651-51483670 | None:intergenic | 35.0% |
| ! | GACTTTCAAAAGTGGTTTTC+AGG | + | chr1.1:51481342-51481361 | MS.gene89570:CDS | 35.0% |
| ! | TCAAGTGATGGTGTGAATTA+TGG | - | chr1.1:51480963-51480982 | None:intergenic | 35.0% |
| ! | TGAGCTACCGTGAATTTTAA+AGG | + | chr1.1:51481148-51481167 | MS.gene89570:intron | 35.0% |
| ! | TGATTTCTATCAGCCACTTT+AGG | - | chr1.1:51482942-51482961 | None:intergenic | 35.0% |
| ! | TGTCTGGAAATTTTTCTGCA+AGG | - | chr1.1:51482768-51482787 | None:intergenic | 35.0% |
| ! | TTGCTAACAATTTTTCCCTG+AGG | - | chr1.1:51481689-51481708 | None:intergenic | 35.0% |
| ! | TTTAGGAGTGTGTATAAGAC+AGG | - | chr1.1:51483706-51483725 | None:intergenic | 35.0% |
| ! | TTTTCTGACTTCTTCAACTG+AGG | - | chr1.1:51480887-51480906 | None:intergenic | 35.0% |
| !! | ATACATTACCTGGTTTTCAG+AGG | - | chr1.1:51484290-51484309 | None:intergenic | 35.0% |
| !! | GTACCTGTTGATGTTTTTGA+AGG | + | chr1.1:51482873-51482892 | MS.gene89570:CDS | 35.0% |
| !! | TAAGCTAGGCTCTAAGTTTA+GGG | - | chr1.1:51483722-51483741 | None:intergenic | 35.0% |
| !! | TTAAGCTAGGCTCTAAGTTT+AGG | - | chr1.1:51483723-51483742 | None:intergenic | 35.0% |
| !!! | ATTTTGACTGTGATGAGGAA+TGG | + | chr1.1:51481253-51481272 | MS.gene89570:intron | 35.0% |
| !!! | CCCTGATATATTTTTGGGTT+GGG | + | chr1.1:51483360-51483379 | MS.gene89570:intron | 35.0% |
| !!! | TATTTTAAAAGCACTGGGGT+CGG | + | chr1.1:51485010-51485029 | MS.gene89570:intron | 35.0% |
| !!! | TTTTTTCAGGGAAGATGCTT+GGG | + | chr1.1:51481636-51481655 | MS.gene89570:intron | 35.0% |
| AAAGAAAAAAAGTCCCACGG+TGG | - | chr1.1:51481893-51481912 | None:intergenic | 40.0% | |
| AACTGGGATTATTGTGCAGT+TGG | + | chr1.1:51481279-51481298 | MS.gene89570:intron | 40.0% | |
| AACTGGTAAACCGGTACAAA+TGG | + | chr1.1:51482075-51482094 | MS.gene89570:intron | 40.0% | |
| AAGAAAAAAAGTCCCACGGT+GGG | - | chr1.1:51481892-51481911 | None:intergenic | 40.0% | |
| AATAGTGAATGCTGCAAAGC+AGG | + | chr1.1:51484651-51484670 | MS.gene89570:CDS | 40.0% | |
| ACAGGTACCTACTAGAAAGA+AGG | - | chr1.1:51482861-51482880 | None:intergenic | 40.0% | |
| ACAGTGATACTGAACATGAG+TGG | + | chr1.1:51481227-51481246 | MS.gene89570:intron | 40.0% | |
| ACCCAAAAATATATCAGGGC+TGG | - | chr1.1:51483359-51483378 | None:intergenic | 40.0% | |
| ACTTCGTGATACAACACAAG+AGG | + | chr1.1:51483217-51483236 | MS.gene89570:CDS | 40.0% | |
| AGAGACCAAATCATTGAAGG+TGG | - | chr1.1:51484484-51484503 | None:intergenic | 40.0% | |
| AGCACTTGAAACTGGTAAAC+CGG | + | chr1.1:51482066-51482085 | MS.gene89570:intron | 40.0% | |
| ATGACGATGACAACAGCAAT+AGG | - | chr1.1:51481604-51481623 | None:intergenic | 40.0% | |
| ATGCATGTTTGGTATCACGA+CGG | + | chr1.1:51481108-51481127 | MS.gene89570:intron | 40.0% | |
| CATCAGTTTGTAGTCTGCTT+TGG | + | chr1.1:51484391-51484410 | MS.gene89570:intron | 40.0% | |
| CCAGTAATAGTTCGTCTTGA+AGG | + | chr1.1:51485084-51485103 | MS.gene89570:CDS | 40.0% | |
| CCTTCAAGACGAACTATTAC+TGG | - | chr1.1:51485087-51485106 | None:intergenic | 40.0% | |
| CTAGAAAGAAGGAATGCATC+AGG | - | chr1.1:51482850-51482869 | None:intergenic | 40.0% | |
| CTCATGTTCAGTATCACTGT+CGG | - | chr1.1:51481227-51481246 | None:intergenic | 40.0% | |
| GAGTGAAGTGAGGTTCTATA+TGG | + | chr1.1:51483817-51483836 | MS.gene89570:intron | 40.0% | |
| GCATTTAACTATACCTCTCG+AGG | - | chr1.1:51483245-51483264 | None:intergenic | 40.0% | |
| GGCATTAACCTGAAATTCAG+AGG | + | chr1.1:51484412-51484431 | MS.gene89570:intron | 40.0% | |
| GTCATTACAACTTGAGTCCA+GGG | + | chr1.1:51483324-51483343 | MS.gene89570:intron | 40.0% | |
| GTGAATAAACGAATCTCGAG+AGG | - | chr1.1:51480704-51480723 | None:intergenic | 40.0% | |
| GTGTATAAGACAGGATGAGA+TGG | - | chr1.1:51483697-51483716 | None:intergenic | 40.0% | |
| GTTTCAACAGGAAAGTGGTA+TGG | + | chr1.1:51485245-51485264 | MS.gene89570:intron | 40.0% | |
| TACAGTTATGGAGTGAAGTG+AGG | + | chr1.1:51483807-51483826 | MS.gene89570:intron | 40.0% | |
| TACCAGCTATATCTTCAACC+TGG | - | chr1.1:51481393-51481412 | None:intergenic | 40.0% | |
| TACTGATGAAGATGCTGCAA+AGG | + | chr1.1:51482899-51482918 | MS.gene89570:CDS | 40.0% | |
| TACTTCCGTTAGATTCCAAG+TGG | + | chr1.1:51482228-51482247 | MS.gene89570:intron | 40.0% | |
| TCATTACAACTTGAGTCCAG+GGG | + | chr1.1:51483325-51483344 | MS.gene89570:intron | 40.0% | |
| TCTTTCACAGATCAATCCCA+TGG | + | chr1.1:51483106-51483125 | MS.gene89570:intron | 40.0% | |
| TGATGAGGAATGGTGTAACT+GGG | + | chr1.1:51481263-51481282 | MS.gene89570:intron | 40.0% | |
| TGTATCATAAGCACAAGCTC+CGG | - | chr1.1:51483791-51483810 | None:intergenic | 40.0% | |
| TTTGAGCGAACATCAAGTGA+TGG | - | chr1.1:51480975-51480994 | None:intergenic | 40.0% | |
| ! | AAGGCACCAATGTTGATCAA+GGG | + | chr1.1:51485103-51485122 | MS.gene89570:CDS | 40.0% |
| ! | AGCCAGCCCTGATATATTTT+TGG | + | chr1.1:51483354-51483373 | MS.gene89570:intron | 40.0% |
| ! | CTGGACTCAAGTTGTAATGA+CGG | - | chr1.1:51483325-51483344 | None:intergenic | 40.0% |
| ! | GCCAGCCCTGATATATTTTT+GGG | + | chr1.1:51483355-51483374 | MS.gene89570:intron | 40.0% |
| ! | GCTTTTCCCTTGATCAACAT+TGG | - | chr1.1:51485112-51485131 | None:intergenic | 40.0% |
| ! | TATCTCTTTCTGGCGATATG+CGG | - | chr1.1:51483192-51483211 | None:intergenic | 40.0% |
| ! | TGATTCTGACTGCACTCTTT+TGG | + | chr1.1:51483001-51483020 | MS.gene89570:CDS | 40.0% |
| ! | TGGACTCAAGTTGTAATGAC+GGG | - | chr1.1:51483324-51483343 | None:intergenic | 40.0% |
| !! | AAGAGTCAAATTTTAGCCGG+TGG | + | chr1.1:51481307-51481326 | MS.gene89570:CDS | 40.0% |
| !! | AAGCTAGGCTCTAAGTTTAG+GGG | - | chr1.1:51483721-51483740 | None:intergenic | 40.0% |
| !! | ATGGATTACCTCGTTTTGAC+CGG | - | chr1.1:51480929-51480948 | None:intergenic | 40.0% |
| !! | TCAAGGGAAAAGCATTCTGA+AGG | + | chr1.1:51485119-51485138 | MS.gene89570:CDS | 40.0% |
| !! | TGCAAAGGTTGTTGATGGTT+TGG | + | chr1.1:51482914-51482933 | MS.gene89570:CDS | 40.0% |
| !! | TTCAAAAGTGGTTTTCAGGG+AGG | + | chr1.1:51481346-51481365 | MS.gene89570:CDS | 40.0% |
| !! | TTTAGGGGTGCTTATGAAAC+AGG | - | chr1.1:51483860-51483879 | None:intergenic | 40.0% |
| !!! | ATTTTAAAAGCACTGGGGTC+GGG | + | chr1.1:51485011-51485030 | MS.gene89570:intron | 40.0% |
| !!! | GCCCTGATATATTTTTGGGT+TGG | + | chr1.1:51483359-51483378 | MS.gene89570:intron | 40.0% |
| !!! | GGAGAATTTTGACTGTGATG+AGG | + | chr1.1:51481248-51481267 | MS.gene89570:intron | 40.0% |
| !!! | GTTTTTTCAGGGAAGATGCT+TGG | + | chr1.1:51481635-51481654 | MS.gene89570:intron | 40.0% |
| ACAAAACAGTCAGGTCCTCA+GGG | + | chr1.1:51481671-51481690 | MS.gene89570:CDS | 45.0% | |
| ACAATGGCTCAATGTGACTC+TGG | + | chr1.1:51481197-51481216 | MS.gene89570:intron | 45.0% | |
| ACCACCGACATCCAGAAAAT+TGG | - | chr1.1:51484263-51484282 | None:intergenic | 45.0% | |
| AGATGGAGAAATTGGCTGCA+TGG | + | chr1.1:51484174-51484193 | MS.gene89570:CDS | 45.0% | |
| ATGCAATATGTCTGTCGGAG+AGG | + | chr1.1:51481915-51481934 | MS.gene89570:intron | 45.0% | |
| CGCAGGTAGCTAATTAAGCT+AGG | - | chr1.1:51483736-51483755 | None:intergenic | 45.0% | |
| CGTCATTACAACTTGAGTCC+AGG | + | chr1.1:51483323-51483342 | MS.gene89570:intron | 45.0% | |
| CTGAAATCCAACGCCCAAAT+TGG | - | chr1.1:51482032-51482051 | None:intergenic | 45.0% | |
| GAAATTGGCTGCATGGTGAA+TGG | + | chr1.1:51484181-51484200 | MS.gene89570:CDS | 45.0% | |
| GATACTCGTGGATGTTGAGA+CGG | - | chr1.1:51480676-51480695 | None:intergenic | 45.0% | |
| GATGCTGCAAAGGTTGTTGA+TGG | + | chr1.1:51482909-51482928 | MS.gene89570:CDS | 45.0% | |
| GCACATTGTTAAGACTGACC+AGG | + | chr1.1:51481372-51481391 | MS.gene89570:CDS | 45.0% | |
| GGATTGGGGACTTTCAAAAG+TGG | + | chr1.1:51481334-51481353 | MS.gene89570:CDS | 45.0% | |
| GGCAGAGACCAAATCATTGA+AGG | - | chr1.1:51484487-51484506 | None:intergenic | 45.0% | |
| GTCTGTCTCCAAAATTGTCC+TGG | + | chr1.1:51483630-51483649 | MS.gene89570:intron | 45.0% | |
| GTGATGAGGAATGGTGTAAC+TGG | + | chr1.1:51481262-51481281 | MS.gene89570:intron | 45.0% | |
| TACAAAACAGTCAGGTCCTC+AGG | + | chr1.1:51481670-51481689 | MS.gene89570:CDS | 45.0% | |
| TACAGTTATGGAGTGGAGTG+AGG | + | chr1.1:51483969-51483988 | MS.gene89570:intron | 45.0% | |
| TAGCATCAGCAGCTACTAGT+TGG | - | chr1.1:51483148-51483167 | None:intergenic | 45.0% | |
| TATGGAGTTAACGTTCCCAG+AGG | + | chr1.1:51480850-51480869 | MS.gene89570:CDS | 45.0% | |
| TCTCAACATCCACGAGTATC+AGG | + | chr1.1:51480676-51480695 | MS.gene89570:CDS | 45.0% | |
| TGCATGTTTGGTATCACGAC+GGG | + | chr1.1:51481109-51481128 | MS.gene89570:intron | 45.0% | |
| TGGGATTATTGTGCAGTTGG+TGG | + | chr1.1:51481282-51481301 | MS.gene89570:intron | 45.0% | |
| TTCACAGATCAATCCCATGG+CGG | + | chr1.1:51483109-51483128 | MS.gene89570:intron | 45.0% | |
| TTCTGCAAGGTCTTCAATGC+TGG | - | chr1.1:51482755-51482774 | None:intergenic | 45.0% | |
| ! | CCTGCCAATTTTCTGGATGT+CGG | + | chr1.1:51484256-51484275 | MS.gene89570:CDS | 45.0% |
| ! | GACCAGGTTGAAGATATAGC+TGG | + | chr1.1:51481388-51481407 | MS.gene89570:CDS | 45.0% |
| ! | GGACTCAAGTTGTAATGACG+GGG | - | chr1.1:51483323-51483342 | None:intergenic | 45.0% |
| ! | GGTTTACCAGTTTCAAGTGC+TGG | - | chr1.1:51482067-51482086 | None:intergenic | 45.0% |
| ! | TCAAGTTGTAATGACGGGGT+GGG | - | chr1.1:51483319-51483338 | None:intergenic | 45.0% |
| ! | TGATGGTTTGGCTCCTAAAG+TGG | + | chr1.1:51482926-51482945 | MS.gene89570:CDS | 45.0% |
| ! | TTTTTCTGGACTGATCCTGC+TGG | + | chr1.1:51481981-51482000 | MS.gene89570:intron | 45.0% |
| !! | GAAGGCACCAATGTTGATCA+AGG | + | chr1.1:51485102-51485121 | MS.gene89570:CDS | 45.0% |
| !! | GAGTGGAGTGAGGTTCTAAA+TGG | + | chr1.1:51483979-51483998 | MS.gene89570:intron | 45.0% |
| !! | TACCAGTTTCAAGTGCTGGA+CGG | - | chr1.1:51482063-51482082 | None:intergenic | 45.0% |
| !! | TGGATTACCTCGTTTTGACC+GGG | - | chr1.1:51480928-51480947 | None:intergenic | 45.0% |
| !! | ATAAAAAAAAAAAAAAAAAG+TGG | - | chr1.1:51482372-51482391 | None:intergenic | 5.0% |
| !!! | ATGAAATTTAAAATAAAAAA+AGG | - | chr1.1:51483560-51483579 | None:intergenic | 5.0% |
| !!! | TATTTATTTTTTTTTAAAAG+TGG | + | chr1.1:51482122-51482141 | MS.gene89570:intron | 5.0% |
| AACACAAGAGGATCCTCGAG+AGG | + | chr1.1:51483229-51483248 | MS.gene89570:CDS | 50.0% | |
| AACCGTCCAGCACTTGAAAC+TGG | + | chr1.1:51482058-51482077 | MS.gene89570:intron | 50.0% | |
| AACTGGCCACCAGACCAATT+TGG | + | chr1.1:51482015-51482034 | MS.gene89570:intron | 50.0% | |
| ACCGGGGAATGCATCTTTGA+TGG | - | chr1.1:51480911-51480930 | None:intergenic | 50.0% | |
| ACTCTGGATCGTAAGACTGC+TGG | + | chr1.1:51482527-51482546 | MS.gene89570:CDS | 50.0% | |
| ACTGGCCACCAGACCAATTT+GGG | + | chr1.1:51482016-51482035 | MS.gene89570:intron | 50.0% | |
| AGTTTACCAGTCCAACCAGC+AGG | - | chr1.1:51481999-51482018 | None:intergenic | 50.0% | |
| ATCCAACGCCCAAATTGGTC+TGG | - | chr1.1:51482027-51482046 | None:intergenic | 50.0% | |
| CCGACATCCAGAAAATTGGC+AGG | - | chr1.1:51484259-51484278 | None:intergenic | 50.0% | |
| GCCATCAAAGATGCATTCCC+CGG | + | chr1.1:51480907-51480926 | MS.gene89570:CDS | 50.0% | |
| TACAAATGGCGTCGTTGGAC+TGG | + | chr1.1:51482089-51482108 | MS.gene89570:intron | 50.0% | |
| TCCAACGACGCCATTTGTAC+CGG | - | chr1.1:51482088-51482107 | None:intergenic | 50.0% | |
| TTATCAGCTGTCTCCGCCAT+GGG | - | chr1.1:51483125-51483144 | None:intergenic | 50.0% | |
| ! | AGGGTTAGCAATGGCCACAA+TGG | + | chr1.1:51484207-51484226 | MS.gene89570:CDS | 50.0% |
| ! | CATTTCGGGTAAGCCCAAGT+CGG | + | chr1.1:51483392-51483411 | MS.gene89570:intron | 50.0% |
| ! | CGGTACTCCTGCCAATTTTC+TGG | + | chr1.1:51484249-51484268 | MS.gene89570:CDS | 50.0% |
| ! | CTCAAGTTGTAATGACGGGG+TGG | - | chr1.1:51483320-51483339 | None:intergenic | 50.0% |
| ! | GAATGGAGCAGGGTTAGCAA+TGG | + | chr1.1:51484198-51484217 | MS.gene89570:CDS | 50.0% |
| ! | GCCAATTTTCTGGATGTCGG+TGG | + | chr1.1:51484259-51484278 | MS.gene89570:CDS | 50.0% |
| ! | GTAATGACGGGGTGGGTTTA+GGG | - | chr1.1:51483312-51483331 | None:intergenic | 50.0% |
| ! | TGTAATGACGGGGTGGGTTT+AGG | - | chr1.1:51483313-51483332 | None:intergenic | 50.0% |
| !! | CAAATTTTAGCCGGTGGACG+AGG | + | chr1.1:51481313-51481332 | MS.gene89570:CDS | 50.0% |
| !! | CTGTTGATTCTGCCATGTGC+CGG | - | chr1.1:51480648-51480667 | None:intergenic | 50.0% |
| !! | GGATTACCTCGTTTTGACCG+GGG | - | chr1.1:51480927-51480946 | None:intergenic | 50.0% |
| !! | TGCTGGTTGGACTGGTAAAC+TGG | + | chr1.1:51481998-51482017 | MS.gene89570:intron | 50.0% |
| ACCGGTACAAATGGCGTCGT+TGG | + | chr1.1:51482084-51482103 | MS.gene89570:intron | 55.0% | |
| ACTCGTGGATGTTGAGACGG+CGG | - | chr1.1:51480673-51480692 | None:intergenic | 55.0% | |
| CACCAGACCAATTTGGGCGT+TGG | + | chr1.1:51482022-51482041 | MS.gene89570:intron | 55.0% | |
| GCTGCATGGTGAATGGAGCA+GGG | + | chr1.1:51484188-51484207 | MS.gene89570:CDS | 55.0% | |
| GGATCGTAAGACTGCTGGTC+CGG | + | chr1.1:51482532-51482551 | MS.gene89570:CDS | 55.0% | |
| GTTATCAGCTGTCTCCGCCA+TGG | - | chr1.1:51483126-51483145 | None:intergenic | 55.0% | |
| TCTGGACTGATCCTGCTGGT+TGG | + | chr1.1:51481985-51482004 | MS.gene89570:intron | 55.0% | |
| TGCATTCCCCGGTCAAAACG+AGG | + | chr1.1:51480918-51480937 | MS.gene89570:CDS | 55.0% | |
| TTAGCCGGTGGACGAGGATT+GGG | + | chr1.1:51481319-51481338 | MS.gene89570:CDS | 55.0% | |
| TTTAGCCGGTGGACGAGGAT+TGG | + | chr1.1:51481318-51481337 | MS.gene89570:CDS | 55.0% | |
| ! | ACTGATCCTGCTGGTTGGAC+TGG | + | chr1.1:51481990-51482009 | MS.gene89570:intron | 55.0% |
| ! | CAACGCCCAAATTGGTCTGG+TGG | - | chr1.1:51482024-51482043 | None:intergenic | 55.0% |
| ! | TAACGTTCCCAGAGGCGTAG+CGG | + | chr1.1:51480858-51480877 | MS.gene89570:CDS | 55.0% |
| !! | GTGCAGGATAGTGCCGACTT+GGG | - | chr1.1:51483408-51483427 | None:intergenic | 55.0% |
| !! | TGGTGCTGCCTCTGAAAACC+AGG | + | chr1.1:51484279-51484298 | MS.gene89570:CDS | 55.0% |
| !! | TGTGCAGGATAGTGCCGACT+TGG | - | chr1.1:51483409-51483428 | None:intergenic | 55.0% |
| ACACCCTTTGGATCCCACCG+TGG | + | chr1.1:51481876-51481895 | MS.gene89570:intron | 60.0% | |
| AGTCCCACGGTGGGATCCAA+AGG | - | chr1.1:51481883-51481902 | None:intergenic | 60.0% | |
| AGTCCCCAATCCTCGTCCAC+CGG | - | chr1.1:51481326-51481345 | None:intergenic | 60.0% | |
| CACCCTTTGGATCCCACCGT+GGG | + | chr1.1:51481877-51481896 | MS.gene89570:intron | 60.0% | |
| CGAGAGGGACCTGATACTCG+TGG | - | chr1.1:51480688-51480707 | None:intergenic | 60.0% | |
| GAGGAAACCGCTACGCCTCT+GGG | - | chr1.1:51480868-51480887 | None:intergenic | 60.0% | |
| GGATCAGGTGGCTGCTGCAA+AGG | + | chr1.1:51484129-51484148 | MS.gene89570:intron | 60.0% | |
| GGCTGCATGGTGAATGGAGC+AGG | + | chr1.1:51484187-51484206 | MS.gene89570:CDS | 60.0% | |
| GTCCCACGGTGGGATCCAAA+GGG | - | chr1.1:51481882-51481901 | None:intergenic | 60.0% | |
| TAGCCGGTGGACGAGGATTG+GGG | + | chr1.1:51481320-51481339 | MS.gene89570:CDS | 60.0% | |
| TGAGGAAACCGCTACGCCTC+TGG | - | chr1.1:51480869-51480888 | None:intergenic | 60.0% | |
| ! | ATTCTGCCATGTGCCGGCGA+CGG | - | chr1.1:51480642-51480661 | None:intergenic | 60.0% |
| !! | AGGGCTGGCTAGAAAACCCC+TGG | - | chr1.1:51483344-51483363 | None:intergenic | 60.0% |
| TCTCGCTCTCTCTCCGTCGC+CGG | + | chr1.1:51480626-51480645 | MS.gene89570:CDS | 65.0% | |
| !! | GCGTCGTTGGACTGGCCAAC+TGG | + | chr1.1:51482097-51482116 | MS.gene89570:intron | 65.0% |
| CTCTCTCCGTCGCCGGCACA+TGG | + | chr1.1:51480633-51480652 | MS.gene89570:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 51480596 | 51485329 | 51480596 | ID=MS.gene89570 |
| chr1.1 | mRNA | 51480596 | 51485329 | 51480596 | ID=MS.gene89570.t1;Parent=MS.gene89570 |
| chr1.1 | exon | 51480596 | 51480697 | 51480596 | ID=MS.gene89570.t1.exon1;Parent=MS.gene89570.t1 |
| chr1.1 | CDS | 51480596 | 51480697 | 51480596 | ID=cds.MS.gene89570.t1;Parent=MS.gene89570.t1 |
| chr1.1 | exon | 51480829 | 51480939 | 51480829 | ID=MS.gene89570.t1.exon2;Parent=MS.gene89570.t1 |
| chr1.1 | CDS | 51480829 | 51480939 | 51480829 | ID=cds.MS.gene89570.t1;Parent=MS.gene89570.t1 |
| chr1.1 | exon | 51481298 | 51481409 | 51481298 | ID=MS.gene89570.t1.exon3;Parent=MS.gene89570.t1 |
| chr1.1 | CDS | 51481298 | 51481409 | 51481298 | ID=cds.MS.gene89570.t1;Parent=MS.gene89570.t1 |
| chr1.1 | exon | 51481645 | 51481709 | 51481645 | ID=MS.gene89570.t1.exon4;Parent=MS.gene89570.t1 |
| chr1.1 | CDS | 51481645 | 51481709 | 51481645 | ID=cds.MS.gene89570.t1;Parent=MS.gene89570.t1 |
| chr1.1 | exon | 51482476 | 51482553 | 51482476 | ID=MS.gene89570.t1.exon5;Parent=MS.gene89570.t1 |
| chr1.1 | CDS | 51482476 | 51482553 | 51482476 | ID=cds.MS.gene89570.t1;Parent=MS.gene89570.t1 |
| chr1.1 | exon | 51482724 | 51482798 | 51482724 | ID=MS.gene89570.t1.exon6;Parent=MS.gene89570.t1 |
| chr1.1 | CDS | 51482724 | 51482798 | 51482724 | ID=cds.MS.gene89570.t1;Parent=MS.gene89570.t1 |
| chr1.1 | exon | 51482873 | 51483025 | 51482873 | ID=MS.gene89570.t1.exon7;Parent=MS.gene89570.t1 |
| chr1.1 | CDS | 51482873 | 51483025 | 51482873 | ID=cds.MS.gene89570.t1;Parent=MS.gene89570.t1 |
| chr1.1 | exon | 51483116 | 51483250 | 51483116 | ID=MS.gene89570.t1.exon8;Parent=MS.gene89570.t1 |
| chr1.1 | CDS | 51483116 | 51483250 | 51483116 | ID=cds.MS.gene89570.t1;Parent=MS.gene89570.t1 |
| chr1.1 | exon | 51484136 | 51484300 | 51484136 | ID=MS.gene89570.t1.exon9;Parent=MS.gene89570.t1 |
| chr1.1 | CDS | 51484136 | 51484300 | 51484136 | ID=cds.MS.gene89570.t1;Parent=MS.gene89570.t1 |
| chr1.1 | exon | 51484550 | 51484672 | 51484550 | ID=MS.gene89570.t1.exon10;Parent=MS.gene89570.t1 |
| chr1.1 | CDS | 51484550 | 51484672 | 51484550 | ID=cds.MS.gene89570.t1;Parent=MS.gene89570.t1 |
| chr1.1 | exon | 51485069 | 51485140 | 51485069 | ID=MS.gene89570.t1.exon11;Parent=MS.gene89570.t1 |
| chr1.1 | CDS | 51485069 | 51485140 | 51485069 | ID=cds.MS.gene89570.t1;Parent=MS.gene89570.t1 |
| chr1.1 | exon | 51485255 | 51485329 | 51485255 | ID=MS.gene89570.t1.exon12;Parent=MS.gene89570.t1 |
| chr1.1 | CDS | 51485255 | 51485329 | 51485255 | ID=cds.MS.gene89570.t1;Parent=MS.gene89570.t1 |
| Gene Sequence |
| Protein sequence |
