Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90143.t1 | XP_003630985.1 | 99.1 | 110 | 1 | 0 | 290 | 399 | 192 | 301 | 3.60E-52 | 216.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90143.t1 | P59169 | 98.6 | 69 | 1 | 0 | 418 | 486 | 68 | 136 | 3.4e-30 | 134.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90143.t1 | G7LBH4 | 99.1 | 110 | 1 | 0 | 290 | 399 | 192 | 301 | 2.6e-52 | 216.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene90143 | 0.815424 | 9.31E-52 | -1.69E-46 |
| MS.gene050442 | MS.gene90143 | 0.817093 | 3.94E-52 | -1.69E-46 |
| MS.gene052020 | MS.gene90143 | 0.811918 | 5.51E-51 | -1.69E-46 |
| MS.gene057869 | MS.gene90143 | 0.83841 | 2.92E-57 | -1.69E-46 |
| MS.gene058010 | MS.gene90143 | 0.811134 | 8.15E-51 | -1.69E-46 |
| MS.gene060918 | MS.gene90143 | 0.815547 | 8.74E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90143.t1 | MTR_8g105860 | 99.091 | 110 | 1 | 0 | 290 | 399 | 192 | 301 | 1.20e-71 | 232 |
| MS.gene90143.t1 | MTR_8g464490 | 71.711 | 152 | 26 | 4 | 160 | 297 | 218 | 366 | 7.78e-55 | 190 |
| MS.gene90143.t1 | MTR_4g097170 | 98.551 | 69 | 1 | 0 | 418 | 486 | 109 | 177 | 4.77e-41 | 145 |
| MS.gene90143.t1 | MTR_7g059070 | 95.652 | 69 | 3 | 0 | 418 | 486 | 68 | 136 | 2.86e-39 | 139 |
| MS.gene90143.t1 | MTR_5g029820 | 95.652 | 69 | 3 | 0 | 418 | 486 | 68 | 136 | 2.86e-39 | 139 |
| MS.gene90143.t1 | MTR_5g029770 | 95.652 | 69 | 3 | 0 | 418 | 486 | 68 | 136 | 2.86e-39 | 139 |
| MS.gene90143.t1 | MTR_4g065990 | 95.652 | 69 | 3 | 0 | 418 | 486 | 68 | 136 | 2.86e-39 | 139 |
| MS.gene90143.t1 | MTR_4g088150 | 95.652 | 69 | 3 | 0 | 418 | 486 | 68 | 136 | 2.86e-39 | 139 |
| MS.gene90143.t1 | MTR_2g035230 | 95.652 | 69 | 3 | 0 | 418 | 486 | 68 | 136 | 2.86e-39 | 139 |
| MS.gene90143.t1 | MTR_8g092720 | 95.652 | 69 | 3 | 0 | 418 | 486 | 68 | 136 | 2.86e-39 | 139 |
| MS.gene90143.t1 | MTR_8g063500 | 95.652 | 69 | 3 | 0 | 418 | 486 | 68 | 136 | 2.86e-39 | 139 |
| MS.gene90143.t1 | MTR_8g103245 | 95.652 | 69 | 3 | 0 | 418 | 486 | 68 | 136 | 2.86e-39 | 139 |
| MS.gene90143.t1 | MTR_8g092820 | 95.652 | 69 | 3 | 0 | 418 | 486 | 68 | 136 | 2.86e-39 | 139 |
| MS.gene90143.t1 | MTR_7g013610 | 95.652 | 69 | 3 | 0 | 418 | 486 | 167 | 235 | 6.71e-38 | 139 |
| MS.gene90143.t1 | MTR_8g099430 | 98.551 | 69 | 1 | 0 | 418 | 486 | 68 | 136 | 2.99e-36 | 131 |
| MS.gene90143.t1 | MTR_2g082370 | 98.551 | 69 | 1 | 0 | 418 | 486 | 78 | 146 | 3.49e-36 | 131 |
| MS.gene90143.t1 | MTR_4g097175 | 98.551 | 69 | 1 | 0 | 418 | 486 | 68 | 136 | 4.33e-36 | 130 |
| MS.gene90143.t1 | MTR_1g023630 | 98.551 | 69 | 1 | 0 | 418 | 486 | 68 | 136 | 4.33e-36 | 130 |
| MS.gene90143.t1 | MTR_8g061940 | 98.551 | 69 | 1 | 0 | 418 | 486 | 68 | 136 | 4.33e-36 | 130 |
| MS.gene90143.t1 | MTR_2g082310 | 92.754 | 69 | 5 | 0 | 418 | 486 | 68 | 136 | 3.03e-34 | 125 |
| MS.gene90143.t1 | MTR_2g082340 | 92.754 | 69 | 5 | 0 | 418 | 486 | 68 | 136 | 3.03e-34 | 125 |
| MS.gene90143.t1 | MTR_2g082400 | 89.855 | 69 | 6 | 1 | 418 | 485 | 67 | 135 | 3.74e-31 | 117 |
| MS.gene90143.t1 | MTR_7g013600 | 79.710 | 69 | 14 | 0 | 418 | 486 | 45 | 113 | 1.97e-27 | 106 |
| MS.gene90143.t1 | MTR_7g023830 | 76.119 | 67 | 16 | 0 | 418 | 484 | 67 | 133 | 6.06e-26 | 103 |
| MS.gene90143.t1 | MTR_7g023880 | 73.529 | 68 | 17 | 1 | 418 | 484 | 70 | 137 | 6.19e-23 | 95.1 |
| MS.gene90143.t1 | MTR_8g105150 | 95.238 | 42 | 1 | 1 | 437 | 477 | 28 | 69 | 4.67e-19 | 81.6 |
| MS.gene90143.t1 | MTR_8g092740 | 94.872 | 39 | 2 | 0 | 448 | 486 | 117 | 155 | 5.32e-18 | 81.3 |
| MS.gene90143.t1 | MTR_5g024530 | 70.175 | 57 | 17 | 0 | 422 | 478 | 98 | 154 | 1.17e-17 | 80.5 |
| MS.gene90143.t1 | MTR_5g089120 | 64.000 | 50 | 18 | 0 | 429 | 478 | 3 | 52 | 9.96e-14 | 67.4 |
| MS.gene90143.t1 | MTR_2g081170 | 36.646 | 161 | 69 | 4 | 1 | 131 | 248 | 405 | 3.60e-13 | 71.6 |
| MS.gene90143.t1 | MTR_8g027840 | 49.254 | 67 | 33 | 1 | 418 | 483 | 59 | 125 | 1.91e-12 | 64.7 |
| MS.gene90143.t1 | MTR_4g128040 | 72.973 | 37 | 10 | 0 | 429 | 465 | 20 | 56 | 5.30e-12 | 62.0 |
| MS.gene90143.t1 | MTR_5g024630 | 73.684 | 38 | 10 | 0 | 429 | 466 | 76 | 113 | 2.10e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90143.t1 | AT1G14810 | 88.182 | 110 | 13 | 0 | 290 | 399 | 188 | 297 | 2.31e-55 | 187 |
| MS.gene90143.t1 | AT1G14810 | 88.182 | 110 | 13 | 0 | 290 | 399 | 188 | 297 | 1.55e-54 | 187 |
| MS.gene90143.t1 | AT4G40030 | 98.551 | 69 | 1 | 0 | 418 | 486 | 96 | 164 | 2.69e-41 | 145 |
| MS.gene90143.t1 | AT1G13370 | 95.652 | 69 | 3 | 0 | 418 | 486 | 68 | 136 | 1.44e-40 | 142 |
| MS.gene90143.t1 | AT5G65360 | 95.652 | 69 | 3 | 0 | 418 | 486 | 68 | 136 | 1.90e-39 | 139 |
| MS.gene90143.t1 | AT5G10390 | 95.652 | 69 | 3 | 0 | 418 | 486 | 68 | 136 | 1.90e-39 | 139 |
| MS.gene90143.t1 | AT5G10400 | 95.652 | 69 | 3 | 0 | 418 | 486 | 68 | 136 | 1.90e-39 | 139 |
| MS.gene90143.t1 | AT3G27360 | 95.652 | 69 | 3 | 0 | 418 | 486 | 68 | 136 | 1.90e-39 | 139 |
| MS.gene90143.t1 | AT1G09200 | 95.652 | 69 | 3 | 0 | 418 | 486 | 68 | 136 | 1.90e-39 | 139 |
| MS.gene90143.t1 | AT5G65350 | 94.203 | 69 | 4 | 0 | 418 | 486 | 68 | 136 | 1.65e-38 | 137 |
| MS.gene90143.t1 | AT5G10980 | 98.551 | 69 | 1 | 0 | 418 | 486 | 68 | 136 | 4.54e-36 | 130 |
| MS.gene90143.t1 | AT4G40040 | 98.551 | 69 | 1 | 0 | 418 | 486 | 68 | 136 | 4.54e-36 | 130 |
| MS.gene90143.t1 | AT4G40040 | 98.551 | 69 | 1 | 0 | 418 | 486 | 68 | 136 | 4.54e-36 | 130 |
| MS.gene90143.t1 | AT4G40040 | 98.551 | 69 | 1 | 0 | 418 | 486 | 68 | 136 | 4.54e-36 | 130 |
| MS.gene90143.t1 | AT4G40030 | 98.551 | 69 | 1 | 0 | 418 | 486 | 68 | 136 | 4.54e-36 | 130 |
| MS.gene90143.t1 | AT4G40030 | 98.551 | 69 | 1 | 0 | 418 | 486 | 68 | 136 | 4.54e-36 | 130 |
| MS.gene90143.t1 | AT4G40030 | 98.551 | 69 | 1 | 0 | 418 | 486 | 68 | 136 | 4.54e-36 | 130 |
| MS.gene90143.t1 | AT1G75600 | 95.652 | 69 | 3 | 0 | 418 | 486 | 68 | 136 | 5.93e-36 | 130 |
| MS.gene90143.t1 | AT1G19890 | 95.652 | 69 | 3 | 0 | 418 | 486 | 69 | 137 | 1.28e-34 | 127 |
| MS.gene90143.t1 | AT5G12910 | 76.471 | 68 | 16 | 0 | 418 | 485 | 63 | 130 | 1.27e-30 | 115 |
| MS.gene90143.t1 | AT1G01370 | 52.778 | 72 | 32 | 1 | 415 | 484 | 103 | 174 | 7.93e-15 | 73.2 |
| MS.gene90143.t1 | AT1G01370 | 52.778 | 72 | 32 | 1 | 415 | 484 | 103 | 174 | 7.93e-15 | 73.2 |
| MS.gene90143.t1 | AT1G01370 | 52.778 | 72 | 32 | 1 | 415 | 484 | 103 | 174 | 7.93e-15 | 73.2 |
| MS.gene90143.t1 | AT1G01370 | 52.778 | 72 | 32 | 1 | 415 | 484 | 103 | 174 | 7.93e-15 | 73.2 |
Find 117 sgRNAs with CRISPR-Local
Find 349 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGCCTTCCCCTTGCCTTGT+TGG | 0.181592 | 2.3:+17261544 | None:intergenic |
| CGCCTTCCCCTTGCCTTGTT+GGG | 0.203018 | 2.3:+17261545 | None:intergenic |
| TCAAGGAGACAAGGAAAATT+TGG | 0.222926 | 2.3:-17258409 | MS.gene90143:CDS |
| TCAAAGTTCATTAGCATCTT+TGG | 0.227250 | 2.3:+17261276 | None:intergenic |
| CCATGCAGTTCTTGCACTTC+AGG | 0.275497 | 2.3:-17256845 | MS.gene90143:CDS |
| AGGGGTCGTAAATCGTCTTC+TGG | 0.277018 | 2.3:-17259808 | MS.gene90143:CDS |
| GTGGAGCCAGTTCCTGATTC+AGG | 0.280781 | 2.3:+17261591 | None:intergenic |
| TAATGCTGCACACAAATTTC+AGG | 0.284797 | 2.3:-17257303 | MS.gene90143:intron |
| AGCATGAATTGCACACAAAT+TGG | 0.287581 | 2.3:+17256783 | None:intergenic |
| GTGCAGCATTAGGATCATTT+TGG | 0.296107 | 2.3:+17257315 | None:intergenic |
| TGAAATTTGTGTGCAGCATT+AGG | 0.307048 | 2.3:+17257305 | None:intergenic |
| GAAGGAAAAGGAATAATAAT+AGG | 0.322246 | 2.3:-17259652 | MS.gene90143:CDS |
| TGTTGGTAACATGAAGTTTA+GGG | 0.341584 | 2.3:-17259827 | MS.gene90143:CDS |
| ATGTTGGTAACATGAAGTTT+AGG | 0.350395 | 2.3:-17259828 | MS.gene90143:CDS |
| CATTCGCGGTGAACGTGCTT+AGG | 0.355234 | 2.3:-17256716 | None:intergenic |
| AAAATTGAGTTCCCTGAATC+AGG | 0.365597 | 2.3:-17261603 | MS.gene90143:CDS |
| CTACAAATCCTACATATACT+AGG | 0.373610 | 2.3:+17260756 | None:intergenic |
| TCAGGACCAGCATAAATATA+TGG | 0.383753 | 2.3:-17259956 | MS.gene90143:CDS |
| GAGAGCGGAGTGCGTTAATC+AGG | 0.386359 | 2.3:-17261494 | MS.gene90143:CDS |
| TAGTGAGTAGTACCAGTCTT+AGG | 0.393119 | 2.3:-17259891 | MS.gene90143:CDS |
| AGTCACCTCTGCCTTGCCCT+TGG | 0.404511 | 2.3:+17261347 | None:intergenic |
| CAAGGAGACAAGGAAAATTT+GGG | 0.416255 | 2.3:-17258408 | MS.gene90143:intron |
| AGGCAAGGGGAAGGCGGTGG+TGG | 0.418592 | 2.3:-17261538 | MS.gene90143:CDS |
| TGGTGGTATAATCTCTGAAA+TGG | 0.420051 | 2.3:+17261296 | None:intergenic |
| GTGCAAGAACTGCATGGCTC+TGG | 0.421979 | 2.3:+17256851 | None:intergenic |
| AGCTGTAATGGAAGATGTCT+TGG | 0.424271 | 2.3:+17259675 | None:intergenic |
| TGCGTTAATCAGGCGAAAAC+CGG | 0.424714 | 2.3:-17261484 | MS.gene90143:CDS |
| TCAGGTGCAGGTGCCAGTGC+AGG | 0.426256 | 2.3:-17261436 | MS.gene90143:CDS |
| CCAATCGTCTTGCTTGTGTC+CGG | 0.429697 | 2.3:+17261465 | None:intergenic |
| TATGGTTGTTAGTACCTATC+AGG | 0.441485 | 2.3:-17258785 | MS.gene90143:CDS |
| GGGGTCGTAAATCGTCTTCT+GGG | 0.442925 | 2.3:-17259807 | MS.gene90143:CDS |
| TTACCTGGTTGGATTGTTTG+AGG | 0.445449 | 2.3:-17256809 | MS.gene90143:CDS |
| CATCAATGTTGCAAAGTCAT+TGG | 0.449370 | 2.3:-17259623 | MS.gene90143:intron |
| CGAGCAAGCTGAATGTCCTT+TGG | 0.451057 | 2.3:+17256742 | None:intergenic |
| GGAAGCAACTGAGGCTTACC+TGG | 0.457278 | 2.3:-17256824 | MS.gene90143:CDS |
| TAATGAAGAAGAAATGAAAC+TGG | 0.458730 | 2.3:-17258432 | MS.gene90143:CDS |
| CAGCTTGCTCGTCGCATTCG+CGG | 0.459350 | 2.3:-17256730 | MS.gene90143:CDS |
| TGAAATCTTGAGCAATTTCA+CGG | 0.459574 | 2.3:+17256991 | None:intergenic |
| GAGTTCCCTGAATCAGGAAC+TGG | 0.459629 | 2.3:-17261597 | MS.gene90143:CDS |
| TGAAATTGCTCAAGATTTCA+AGG | 0.466768 | 2.3:-17256988 | MS.gene90143:intron |
| TCCATTACAGCTGAAGGAAA+AGG | 0.468562 | 2.3:-17259664 | MS.gene90143:CDS |
| GATAAGAACAGGTGCAATCC+TGG | 0.472976 | 2.3:-17259706 | MS.gene90143:CDS |
| AGAAAATCACAGATAAGAAC+AGG | 0.480243 | 2.3:-17259717 | MS.gene90143:CDS |
| GATGTCTTGGATTTATTACC+AGG | 0.480862 | 2.3:+17259688 | None:intergenic |
| ACAAGGCAAGGGGAAGGCGG+TGG | 0.483097 | 2.3:-17261541 | MS.gene90143:CDS |
| TTGAGCTCCCTAGTATATGT+AGG | 0.485838 | 2.3:-17260764 | MS.gene90143:CDS |
| ACAAACTTAGCTTCATAACT+AGG | 0.487569 | 2.3:+17259757 | None:intergenic |
| GGCAGTACCCCAACAAGGCA+AGG | 0.494029 | 2.3:-17261553 | MS.gene90143:CDS |
| TAGTAATAGTTACCTCATCA+AGG | 0.496624 | 2.3:+17258203 | None:intergenic |
| AGTAGAAGCCTCAAGAGTTC+AGG | 0.496950 | 2.3:-17259974 | MS.gene90143:CDS |
| AGCTCCACTAGCCGCCTGAT+AGG | 0.498168 | 2.3:+17258771 | None:intergenic |
| CAAGACGATTGGGACTTCTC+AGG | 0.499022 | 2.3:-17261454 | MS.gene90143:CDS |
| ATTCGCGGTGAACGTGCTTA+GGG | 0.501136 | 2.3:-17256715 | None:intergenic |
| GGTGCAGGTGCCAGTGCAGG+TGG | 0.502905 | 2.3:-17261433 | MS.gene90143:CDS |
| GCCTTCCCCTTGCCTTGTTG+GGG | 0.506108 | 2.3:+17261546 | None:intergenic |
| CGGACACAAGCAAGACGATT+GGG | 0.506404 | 2.3:-17261464 | MS.gene90143:CDS |
| TGGAGCTGGTGCTGCTGCAA+TGG | 0.507471 | 2.3:-17258755 | MS.gene90143:CDS |
| TATCAGGCGGCTAGTGGAGC+TGG | 0.507716 | 2.3:-17258769 | MS.gene90143:CDS |
| ATGCTGGTCCTGAACTCTTG+AGG | 0.511672 | 2.3:+17259966 | None:intergenic |
| GATCCTCTACTCAGTGGCTG+TGG | 0.512205 | 2.3:+17261318 | None:intergenic |
| TCTTCTGGGAAATCTAGTGT+TGG | 0.515601 | 2.3:-17259793 | MS.gene90143:CDS |
| AAAAGTCTCAAAAGTGGAGA+TGG | 0.515736 | 2.3:-17259851 | MS.gene90143:CDS |
| TGCCACGACGTTACTTGAAG+TGG | 0.516595 | 2.3:+17261572 | None:intergenic |
| CTTCTGGGAAATCTAGTGTT+GGG | 0.517475 | 2.3:-17259792 | MS.gene90143:CDS |
| ACAGGCAAAGCAAGTTCATC+CGG | 0.517882 | 2.3:-17257345 | MS.gene90143:intron |
| GCAACTGAGGCTTACCTGGT+TGG | 0.520813 | 2.3:-17256820 | MS.gene90143:CDS |
| GATAACTTCTCCACCTGCAC+TGG | 0.522401 | 2.3:+17261423 | None:intergenic |
| AAGTTCATTAGCATCTTTGG+TGG | 0.525227 | 2.3:+17261279 | None:intergenic |
| TGGAGCCAGTTCCTGATTCA+GGG | 0.525265 | 2.3:+17261592 | None:intergenic |
| TCTGCATGAGCCCGCATGAC+GGG | 0.525434 | 2.3:+17258253 | None:intergenic |
| GATTGGGACTTCTCAGGTGC+AGG | 0.527401 | 2.3:-17261448 | MS.gene90143:CDS |
| AAACCATGTGATCAGAAAAG+TGG | 0.530271 | 2.3:-17259922 | MS.gene90143:CDS |
| AGTACCTATCAGGCGGCTAG+TGG | 0.530566 | 2.3:-17258775 | MS.gene90143:CDS |
| ATGTAAAATATTTAACCGAC+AGG | 0.534319 | 2.3:-17258581 | MS.gene90143:intron |
| GCAGTACCCCAACAAGGCAA+GGG | 0.536991 | 2.3:-17261552 | MS.gene90143:CDS |
| ACGAAGACTGGCCAAGGGCA+AGG | 0.539812 | 2.3:-17261358 | MS.gene90143:CDS |
| AACACCAAAAGTCTCAAAAG+TGG | 0.540910 | 2.3:-17259857 | MS.gene90143:CDS |
| ACCCCAACAAGGCAAGGGGA+AGG | 0.545952 | 2.3:-17261547 | MS.gene90143:CDS |
| ACTGGCCAAGGGCAAGGCAG+AGG | 0.546522 | 2.3:-17261352 | MS.gene90143:CDS |
| GTTGTTGATTCATCTGATGA+AGG | 0.547741 | 2.3:-17261516 | MS.gene90143:CDS |
| ACATCTTCCATTACAGCTGA+AGG | 0.548952 | 2.3:-17259670 | MS.gene90143:CDS |
| CCGGACACAAGCAAGACGAT+TGG | 0.551290 | 2.3:-17261465 | MS.gene90143:CDS |
| TACAAATCCTACATATACTA+GGG | 0.555180 | 2.3:+17260757 | None:intergenic |
| ACACCTCCATATATTTATGC+TGG | 0.557766 | 2.3:+17259950 | None:intergenic |
| TGCACTTCAGGAAGCAACTG+AGG | 0.558912 | 2.3:-17256833 | MS.gene90143:CDS |
| TCAAAAGTGGAGATGGATGT+TGG | 0.563203 | 2.3:-17259844 | MS.gene90143:CDS |
| TAATGAACTTTGAGCTGAAG+TGG | 0.564308 | 2.3:-17261266 | MS.gene90143:CDS |
| GTTTGTTTCAAAGCAGCAGA+GGG | 0.566136 | 2.3:-17259740 | MS.gene90143:CDS |
| TATACGAGTACCCGTCATGC+GGG | 0.568049 | 2.3:-17258263 | MS.gene90143:CDS |
| AGTAATAGTTACCTCATCAA+GGG | 0.570369 | 2.3:+17258204 | None:intergenic |
| CTCTGCATGAGCCCGCATGA+CGG | 0.576671 | 2.3:+17258252 | None:intergenic |
| GCTTGAGCTGCAGACTCGAG+TGG | 0.586075 | 2.3:-17258728 | MS.gene90143:intron |
| AATGCATCTGTTCTTTCGAA+CGG | 0.590643 | 2.3:-17258458 | MS.gene90143:CDS |
| CCAACAAGGCAAGGGGAAGG+CGG | 0.591447 | 2.3:-17261544 | MS.gene90143:CDS |
| CCTGAAGTGCAAGAACTGCA+TGG | 0.601251 | 2.3:+17256845 | None:intergenic |
| TGAAACTGGTCAAGGAGACA+AGG | 0.604591 | 2.3:-17258418 | MS.gene90143:CDS |
| AGTTTGTTTCAAAGCAGCAG+AGG | 0.620497 | 2.3:-17259741 | MS.gene90143:CDS |
| GTGTGCAATTCATGCTAAGA+GGG | 0.622964 | 2.3:-17256776 | MS.gene90143:CDS |
| AATGCTACAGGTGTTGCGTA+TGG | 0.623957 | 2.3:-17258803 | MS.gene90143:intron |
| GAGGGTGACAATTATGCCAA+AGG | 0.629580 | 2.3:-17256758 | MS.gene90143:CDS |
| TGTGTGCAATTCATGCTAAG+AGG | 0.637555 | 2.3:-17256777 | MS.gene90143:CDS |
| AGAAGAAATGAAACTGGTCA+AGG | 0.637947 | 2.3:-17258426 | MS.gene90143:CDS |
| ATTCGAGAGACCCCTTGATG+AGG | 0.638486 | 2.3:-17258215 | MS.gene90143:intron |
| GAACCACAGCCACTGAGTAG+AGG | 0.642081 | 2.3:-17261321 | MS.gene90143:CDS |
| CAGTACCCCAACAAGGCAAG+GGG | 0.643145 | 2.3:-17261551 | MS.gene90143:CDS |
| GTAATAGTTACCTCATCAAG+GGG | 0.648620 | 2.3:+17258205 | None:intergenic |
| GGGCAAGGCAGAGGTGACTG+AGG | 0.665571 | 2.3:-17261343 | MS.gene90143:CDS |
| TGTCCTCAAACAATCCAACC+AGG | 0.667495 | 2.3:+17256806 | None:intergenic |
| GTTGGTAACATGAAGTTTAG+GGG | 0.667862 | 2.3:-17259826 | MS.gene90143:CDS |
| GGACCAGCATAAATATATGG+AGG | 0.674367 | 2.3:-17259953 | MS.gene90143:CDS |
| CTCCACTTCAAGTAACGTCG+TGG | 0.679657 | 2.3:-17261574 | MS.gene90143:CDS |
| ATTCATCTGATGAAGGAGAG+CGG | 0.682819 | 2.3:-17261509 | MS.gene90143:CDS |
| GTCGTGGCAGTACCCCAACA+AGG | 0.686800 | 2.3:-17261558 | MS.gene90143:CDS |
| GGTTGTTAGTACCTATCAGG+CGG | 0.692262 | 2.3:-17258782 | MS.gene90143:CDS |
| GAAATGGATCCTCTACTCAG+TGG | 0.698298 | 2.3:+17261312 | None:intergenic |
| GTATACGAGTACCCGTCATG+CGG | 0.702661 | 2.3:-17258264 | MS.gene90143:CDS |
| GATTTGTAGTATATGCAATG+AGG | 0.704831 | 2.3:-17260742 | MS.gene90143:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTAAATATTTTTAAAAA+TGG | + | chr2.3:17260266-17260285 | None:intergenic | 0.0% |
| !!! | TAAAAATATTTAATTTATAT+CGG | - | chr2.3:17260270-17260289 | MS.gene90143:intron | 0.0% |
| !! | TAAACTAAAAAGTAAATTAT+AGG | + | chr2.3:17258990-17259009 | None:intergenic | 10.0% |
| !! | AAGAGTAAATATATTCTATT+TGG | - | chr2.3:17259313-17259332 | MS.gene90143:intron | 15.0% |
| !! | AGAGTAAATATATTCTATTT+GGG | - | chr2.3:17259314-17259333 | MS.gene90143:intron | 15.0% |
| !! | TAATAAATCACACTAAAAAA+TGG | + | chr2.3:17259458-17259477 | None:intergenic | 15.0% |
| !!! | AAAATTGATTTTGAAATGTT+TGG | + | chr2.3:17259345-17259364 | None:intergenic | 15.0% |
| !!! | ATTTTGGATTCATAATTTTT+AGG | - | chr2.3:17261180-17261199 | MS.gene90143:intron | 15.0% |
| !!! | TTTAATTTCACTTATATATG+AGG | + | chr2.3:17259389-17259408 | None:intergenic | 15.0% |
| !! | AAGTAAATTATAGGATATCT+AGG | + | chr2.3:17258981-17259000 | None:intergenic | 20.0% |
| !! | ACAAATTAAATAAACCAAAG+AGG | + | chr2.3:17261415-17261434 | None:intergenic | 20.0% |
| !! | GAGTAAATATATTCTATTTG+GGG | - | chr2.3:17259315-17259334 | MS.gene90143:intron | 20.0% |
| !! | TCTGAAAACCTAAAAAATTA+GGG | + | chr2.3:17261147-17261166 | None:intergenic | 20.0% |
| !! | TGAATGAAGATAAAATTTGT+AGG | + | chr2.3:17258778-17258797 | None:intergenic | 20.0% |
| !! | TGAGTTCATTTATTTATGTT+TGG | - | chr2.3:17259177-17259196 | MS.gene90143:intron | 20.0% |
| !! | TTCTACTCAATAAGAAATAT+GGG | + | chr2.3:17257471-17257490 | None:intergenic | 20.0% |
| !! | TTTCTACTCAATAAGAAATA+TGG | + | chr2.3:17257472-17257491 | None:intergenic | 20.0% |
| !!! | AGAGTTTTGAATTTGAATTT+TGG | - | chr2.3:17261164-17261183 | MS.gene90143:intron | 20.0% |
| !!! | GTTTTGTTTTTTGACTTTTA+AGG | - | chr2.3:17259703-17259722 | MS.gene90143:CDS | 20.0% |
| !!! | TATTTAATTTATATCGGACT+CGG | - | chr2.3:17260276-17260295 | MS.gene90143:intron | 20.0% |
| !!! | TTAAATATTTTACATGTTGG+TGG | + | chr2.3:17259743-17259762 | None:intergenic | 20.0% |
| !!! | TTTGATATTGTTGTTATAGA+CGG | - | chr2.3:17261445-17261464 | MS.gene90143:CDS | 20.0% |
| !!! | TTTTAGGAATTTTGAATTTG+CGG | - | chr2.3:17261196-17261215 | MS.gene90143:intron | 20.0% |
| !!! | TTTTTTGACTTTTAAGGTAT+TGG | - | chr2.3:17259709-17259728 | MS.gene90143:CDS | 20.0% |
| ! | AAAGAAAGAAAGAAAGAAAG+AGG | + | chr2.3:17260775-17260794 | None:intergenic | 25.0% |
| ! | AAAGAAAGAGGAAGATAAAT+CGG | + | chr2.3:17260763-17260782 | None:intergenic | 25.0% |
| ! | AATAATTAAGTGTGAATCGA+AGG | + | chr2.3:17258264-17258283 | None:intergenic | 25.0% |
| ! | AATTATAGGATATCTAGGAA+AGG | + | chr2.3:17258976-17258995 | None:intergenic | 25.0% |
| ! | AATTTCTAAACTACTAGTAG+TGG | + | chr2.3:17257781-17257800 | None:intergenic | 25.0% |
| ! | ACATACTTTCTTATTGTTAC+AGG | - | chr2.3:17260966-17260985 | MS.gene90143:intron | 25.0% |
| ! | ACATCAATGTTAATGTTATG+TGG | - | chr2.3:17257611-17257630 | MS.gene90143:intron | 25.0% |
| ! | ACTCCAAAAGAAAAATTCAA+TGG | + | chr2.3:17257524-17257543 | None:intergenic | 25.0% |
| ! | ATATAATGATCAGTACATTG+TGG | - | chr2.3:17257238-17257257 | MS.gene90143:intron | 25.0% |
| ! | ATCTCTTAAAGTGAAAAAGT+GGG | - | chr2.3:17257805-17257824 | MS.gene90143:intron | 25.0% |
| ! | ATGTAAAATATTTAACCGAC+AGG | - | chr2.3:17259748-17259767 | MS.gene90143:CDS | 25.0% |
| ! | CATCAACAAACTTCAATAAT+GGG | + | chr2.3:17260449-17260468 | None:intergenic | 25.0% |
| ! | CTATCTCATATTCTAGTATT+GGG | - | chr2.3:17259630-17259649 | MS.gene90143:CDS | 25.0% |
| ! | CTGAAAACCTAAAAAATTAG+GGG | + | chr2.3:17261146-17261165 | None:intergenic | 25.0% |
| ! | GAAGGAAAAGGAATAATAAT+AGG | - | chr2.3:17258677-17258696 | MS.gene90143:intron | 25.0% |
| ! | TAATGAAGAAGAAATGAAAC+TGG | - | chr2.3:17259897-17259916 | MS.gene90143:CDS | 25.0% |
| ! | TACAAATCCTACATATACTA+GGG | + | chr2.3:17257575-17257594 | None:intergenic | 25.0% |
| ! | TCAAAGAAACGTTAAAAATG+CGG | + | chr2.3:17258294-17258313 | None:intergenic | 25.0% |
| ! | TCATCAACAAACTTCAATAA+TGG | + | chr2.3:17260450-17260469 | None:intergenic | 25.0% |
| ! | TCTATCTCATATTCTAGTAT+TGG | - | chr2.3:17259629-17259648 | MS.gene90143:CDS | 25.0% |
| ! | TGAAATTAAACTGACACTTA+TGG | - | chr2.3:17259399-17259418 | MS.gene90143:intron | 25.0% |
| ! | TTGATATAGGGTGATTATAA+GGG | - | chr2.3:17260563-17260582 | MS.gene90143:intron | 25.0% |
| ! | TTTCAGAATCTCAAGATAAA+GGG | - | chr2.3:17260537-17260556 | MS.gene90143:intron | 25.0% |
| ! | TTTGATATAGGGTGATTATA+AGG | - | chr2.3:17260562-17260581 | MS.gene90143:intron | 25.0% |
| !! | AATTTGCGGTTATGATTTTT+AGG | - | chr2.3:17261210-17261229 | MS.gene90143:intron | 25.0% |
| !! | ATAACTGTCACTTAATACAA+AGG | + | chr2.3:17258931-17258950 | None:intergenic | 25.0% |
| !! | CCTTTTCATTTGAAAAACAA+AGG | - | chr2.3:17260191-17260210 | MS.gene90143:intron | 25.0% |
| !! | CGGTTAAATATTTTACATGT+TGG | + | chr2.3:17259746-17259765 | None:intergenic | 25.0% |
| !! | CTCTGAAAACCTAAAAAATT+AGG | + | chr2.3:17261148-17261167 | None:intergenic | 25.0% |
| !! | TAACTGTCACTTAATACAAA+GGG | + | chr2.3:17258930-17258949 | None:intergenic | 25.0% |
| !! | TGATGCATTTGATAATCATT+AGG | + | chr2.3:17258874-17258893 | None:intergenic | 25.0% |
| !!! | ATTATTGAAGTTTGTTGATG+AGG | - | chr2.3:17260449-17260468 | MS.gene90143:intron | 25.0% |
| !!! | CCTTTGTTTTTCAAATGAAA+AGG | + | chr2.3:17260194-17260213 | None:intergenic | 25.0% |
| !!! | TGAATTTTTCTTTTGGAGTT+CGG | - | chr2.3:17257525-17257544 | MS.gene90143:intron | 25.0% |
| !!! | TTTAACGTTTCTTTGAGATT+TGG | - | chr2.3:17258298-17258317 | MS.gene90143:CDS | 25.0% |
| !!! | TTTGATTTGATAAATGCTAC+AGG | - | chr2.3:17259514-17259533 | MS.gene90143:intron | 25.0% |
| AAAAATGCATGACTTGAAGA+AGG | + | chr2.3:17258744-17258763 | None:intergenic | 30.0% | |
| AAATCAGAACCATTAGATCA+AGG | - | chr2.3:17257917-17257936 | MS.gene90143:intron | 30.0% | |
| AACTGAATGAAGAAGAGAAA+AGG | + | chr2.3:17260798-17260817 | None:intergenic | 30.0% | |
| ACAAACTTAGCTTCATAACT+AGG | + | chr2.3:17258575-17258594 | None:intergenic | 30.0% | |
| ACCTCAGCATGTATATATTA+CGG | - | chr2.3:17257848-17257867 | MS.gene90143:intron | 30.0% | |
| AGAAAATCACAGATAAGAAC+AGG | - | chr2.3:17258612-17258631 | MS.gene90143:intron | 30.0% | |
| AGAGCTCAAAACTTCTAATT+TGG | + | chr2.3:17258906-17258925 | None:intergenic | 30.0% | |
| AGCTTTGCGAATTTGATTAT+CGG | + | chr2.3:17260855-17260874 | None:intergenic | 30.0% | |
| AGTAATAGTTACCTCATCAA+GGG | + | chr2.3:17260128-17260147 | None:intergenic | 30.0% | |
| ATGTTCTTATTGAGAATGCT+GGG | - | chr2.3:17259023-17259042 | MS.gene90143:intron | 30.0% | |
| CAAAGAAAATGTGTGTTCTT+TGG | - | chr2.3:17260325-17260344 | MS.gene90143:intron | 30.0% | |
| CAAAGAAACGTTAAAAATGC+GGG | + | chr2.3:17258293-17258312 | None:intergenic | 30.0% | |
| CATCTCTTAAAGTGAAAAAG+TGG | - | chr2.3:17257804-17257823 | MS.gene90143:intron | 30.0% | |
| CTACAAATCCTACATATACT+AGG | + | chr2.3:17257576-17257595 | None:intergenic | 30.0% | |
| GAAACACGAAGTTAATACAA+AGG | + | chr2.3:17260491-17260510 | None:intergenic | 30.0% | |
| GATTTGTAGTATATGCAATG+AGG | - | chr2.3:17257587-17257606 | MS.gene90143:intron | 30.0% | |
| GGCAAAAGTTATTATGCATA+AGG | - | chr2.3:17257869-17257888 | MS.gene90143:intron | 30.0% | |
| GTTTCAGAATCTCAAGATAA+AGG | - | chr2.3:17260536-17260555 | MS.gene90143:intron | 30.0% | |
| TAAGTTATGCAGGATTTCTA+AGG | - | chr2.3:17260668-17260687 | MS.gene90143:intron | 30.0% | |
| TACTCAATAAGAAATATGGG+TGG | + | chr2.3:17257468-17257487 | None:intergenic | 30.0% | |
| TAGTAATAGTTACCTCATCA+AGG | + | chr2.3:17260129-17260148 | None:intergenic | 30.0% | |
| TATACATAGTCAATTCGCTT+GGG | - | chr2.3:17257203-17257222 | MS.gene90143:intron | 30.0% | |
| TATGGTGTATAGTGTTTGAT+GGG | - | chr2.3:17259417-17259436 | MS.gene90143:intron | 30.0% | |
| TATGTTCTTATTGAGAATGC+TGG | - | chr2.3:17259022-17259041 | MS.gene90143:intron | 30.0% | |
| TCAAAGTTCATTAGCATCTT+TGG | + | chr2.3:17257056-17257075 | None:intergenic | 30.0% | |
| TCTGAATGAGTTAGAAAATC+TGG | - | chr2.3:17258800-17258819 | MS.gene90143:intron | 30.0% | |
| TGAAATCTTGAGCAATTTCA+CGG | + | chr2.3:17261341-17261360 | None:intergenic | 30.0% | |
| TGAAATTGCTCAAGATTTCA+AGG | - | chr2.3:17261341-17261360 | MS.gene90143:CDS | 30.0% | |
| TTAAAGTGAAAAAGTGGGAT+GGG | - | chr2.3:17257810-17257829 | MS.gene90143:intron | 30.0% | |
| TTAACTTCGTGTTTCTTGTA+TGG | - | chr2.3:17260496-17260515 | MS.gene90143:intron | 30.0% | |
| TTATGGTGTATAGTGTTTGA+TGG | - | chr2.3:17259416-17259435 | MS.gene90143:intron | 30.0% | |
| ! | AAACCTTCAATTTGAGATCA+AGG | + | chr2.3:17259687-17259706 | None:intergenic | 30.0% |
| ! | AGATAAAGGGCTTTTGATAT+AGG | - | chr2.3:17260550-17260569 | MS.gene90143:intron | 30.0% |
| ! | AGTCAATTTTGCAGTGAAAA+TGG | + | chr2.3:17259132-17259151 | None:intergenic | 30.0% |
| ! | CATTTTCTTTGCCTCATTTT+TGG | + | chr2.3:17260316-17260335 | None:intergenic | 30.0% |
| ! | GATAAAGGGCTTTTGATATA+GGG | - | chr2.3:17260551-17260570 | MS.gene90143:intron | 30.0% |
| ! | GGACCATTGAATTTTTCTTT+TGG | - | chr2.3:17257518-17257537 | MS.gene90143:intron | 30.0% |
| ! | TCGTTTTCCCCTAATTTTTT+AGG | - | chr2.3:17261136-17261155 | MS.gene90143:intron | 30.0% |
| ! | TGCATTTGATAATCATTAGG+TGG | + | chr2.3:17258871-17258890 | None:intergenic | 30.0% |
| !! | ATGAACTCACTTTTAACAAG+AGG | + | chr2.3:17259166-17259185 | None:intergenic | 30.0% |
| !! | ATGTTGGTAACATGAAGTTT+AGG | - | chr2.3:17258501-17258520 | MS.gene90143:intron | 30.0% |
| !! | ATTAGTTTGTGTGCTTTGTA+TGG | - | chr2.3:17259474-17259493 | MS.gene90143:intron | 30.0% |
| !! | TGTGTTGTTTATGATCAATC+CGG | - | chr2.3:17259075-17259094 | MS.gene90143:intron | 30.0% |
| !! | TGTTGGTAACATGAAGTTTA+GGG | - | chr2.3:17258502-17258521 | MS.gene90143:intron | 30.0% |
| !!! | CACTTTTTCACTTTAAGAGA+TGG | + | chr2.3:17257806-17257825 | None:intergenic | 30.0% |
| !!! | CTCTAATGATTTTGAAGTTC+AGG | - | chr2.3:17259792-17259811 | MS.gene90143:CDS | 30.0% |
| !!! | TGTTGCCAGAATTAGTTTTA+GGG | - | chr2.3:17260616-17260635 | MS.gene90143:intron | 30.0% |
| !!! | TTGACTTTTAAGGTATTGGA+AGG | - | chr2.3:17259713-17259732 | MS.gene90143:CDS | 30.0% |
| AAAAGTCTCAAAAGTGGAGA+TGG | - | chr2.3:17258478-17258497 | MS.gene90143:CDS | 35.0% | |
| AAAATTGAGTTCCCTGAATC+AGG | - | chr2.3:17256726-17256745 | MS.gene90143:CDS | 35.0% | |
| AAACCATGTGATCAGAAAAG+TGG | - | chr2.3:17258407-17258426 | MS.gene90143:intron | 35.0% | |
| AACACCAAAAGTCTCAAAAG+TGG | - | chr2.3:17258472-17258491 | MS.gene90143:CDS | 35.0% | |
| AACATCTGTCCTTGATCTAA+TGG | + | chr2.3:17257929-17257948 | None:intergenic | 35.0% | |
| AAGTGTGAATCGAAGGAAAA+CGG | + | chr2.3:17258257-17258276 | None:intergenic | 35.0% | |
| AAGTTCATTAGCATCTTTGG+TGG | + | chr2.3:17257053-17257072 | None:intergenic | 35.0% | |
| AATGCATCTGTTCTTTCGAA+CGG | - | chr2.3:17259871-17259890 | MS.gene90143:CDS | 35.0% | |
| ACACCTCCATATATTTATGC+TGG | + | chr2.3:17258382-17258401 | None:intergenic | 35.0% | |
| ACTACGGTAGAATATTCACA+TGG | - | chr2.3:17259253-17259272 | MS.gene90143:intron | 35.0% | |
| AGAAAGAATTCGGTAAGTGA+AGG | - | chr2.3:17257180-17257199 | MS.gene90143:intron | 35.0% | |
| AGAAGAAATGAAACTGGTCA+AGG | - | chr2.3:17259903-17259922 | MS.gene90143:CDS | 35.0% | |
| AGCATGAATTGCACACAAAT+TGG | + | chr2.3:17261549-17261568 | None:intergenic | 35.0% | |
| AGGCAAAAACTTGGTTACTA+CGG | - | chr2.3:17259237-17259256 | MS.gene90143:intron | 35.0% | |
| AGGCTAGAAATCAATTCTAG+AGG | - | chr2.3:17259217-17259236 | MS.gene90143:intron | 35.0% | |
| AGTCCTTGATCTCAAATTGA+AGG | - | chr2.3:17259681-17259700 | MS.gene90143:CDS | 35.0% | |
| ATCTGTGTTAGCATTACTCA+CGG | - | chr2.3:17259103-17259122 | MS.gene90143:intron | 35.0% | |
| ATGAGTTAGAAAATCTGGTG+CGG | - | chr2.3:17258805-17258824 | MS.gene90143:intron | 35.0% | |
| ATGGTGTATAGTGTTTGATG+GGG | - | chr2.3:17259418-17259437 | MS.gene90143:intron | 35.0% | |
| CAAGGACAGATGTTATAATC+TGG | - | chr2.3:17257935-17257954 | MS.gene90143:intron | 35.0% | |
| CAAGGAGACAAGGAAAATTT+GGG | - | chr2.3:17259921-17259940 | MS.gene90143:CDS | 35.0% | |
| CATAAGGATTTCCTTATGCA+TGG | - | chr2.3:17257885-17257904 | MS.gene90143:intron | 35.0% | |
| CATCAATGTTGCAAAGTCAT+TGG | - | chr2.3:17258706-17258725 | MS.gene90143:intron | 35.0% | |
| CTAGAAATACCATAGTCAGA+CGG | - | chr2.3:17257104-17257123 | MS.gene90143:intron | 35.0% | |
| CTTAAAGTGAAAAAGTGGGA+TGG | - | chr2.3:17257809-17257828 | MS.gene90143:intron | 35.0% | |
| CTTAGCCCTAAAACTAATTC+TGG | + | chr2.3:17260624-17260643 | None:intergenic | 35.0% | |
| GAACTTATGTGAGGAAAAAC+TGG | - | chr2.3:17259652-17259671 | MS.gene90143:CDS | 35.0% | |
| GATGTCTTGGATTTATTACC+AGG | + | chr2.3:17258644-17258663 | None:intergenic | 35.0% | |
| GATTGAAATGGAAATGGAAG+TGG | + | chr2.3:17258218-17258237 | None:intergenic | 35.0% | |
| GTAATAGTTACCTCATCAAG+GGG | + | chr2.3:17260127-17260146 | None:intergenic | 35.0% | |
| GTATACATAGTCAATTCGCT+TGG | - | chr2.3:17257202-17257221 | MS.gene90143:intron | 35.0% | |
| GTTTCTTGTATGGTTGACTA+AGG | - | chr2.3:17260506-17260525 | MS.gene90143:intron | 35.0% | |
| TAATGAACTTTGAGCTGAAG+TGG | - | chr2.3:17257063-17257082 | MS.gene90143:intron | 35.0% | |
| TAATGCTGCACACAAATTTC+AGG | - | chr2.3:17261026-17261045 | MS.gene90143:intron | 35.0% | |
| TACTCACTCTGTTATTGTGT+TGG | + | chr2.3:17257981-17258000 | None:intergenic | 35.0% | |
| TATGGTTGTTAGTACCTATC+AGG | - | chr2.3:17259544-17259563 | MS.gene90143:intron | 35.0% | |
| TATTCCAAATCCAGTACATC+TGG | - | chr2.3:17260223-17260242 | MS.gene90143:intron | 35.0% | |
| TCAAGGAGACAAGGAAAATT+TGG | - | chr2.3:17259920-17259939 | MS.gene90143:CDS | 35.0% | |
| TCAATAAGAAATATGGGTGG+AGG | + | chr2.3:17257465-17257484 | None:intergenic | 35.0% | |
| TCAGGACCAGCATAAATATA+TGG | - | chr2.3:17258373-17258392 | MS.gene90143:intron | 35.0% | |
| TCATCATGCATAAGTTATGC+AGG | - | chr2.3:17260658-17260677 | MS.gene90143:intron | 35.0% | |
| TCGCAAAGCTTATTATCACA+AGG | - | chr2.3:17260865-17260884 | MS.gene90143:intron | 35.0% | |
| TGAAATTTGTGTGCAGCATT+AGG | + | chr2.3:17261027-17261046 | None:intergenic | 35.0% | |
| TGAAGAAGAAAAACGAAGAC+TGG | - | chr2.3:17256959-17256978 | MS.gene90143:intron | 35.0% | |
| TGGATATGCATGTAAATCTG+AGG | - | chr2.3:17259197-17259216 | MS.gene90143:intron | 35.0% | |
| TGTGAAATCTTGTTCCTCTT+TGG | - | chr2.3:17261398-17261417 | MS.gene90143:CDS | 35.0% | |
| TGTTTATGATCAATCCGGTT+CGG | - | chr2.3:17259080-17259099 | MS.gene90143:intron | 35.0% | |
| TTCGCAACTCAGAAAGAATT+CGG | - | chr2.3:17257170-17257189 | MS.gene90143:intron | 35.0% | |
| TTCTTTGGTATCTGATGGTT+TGG | - | chr2.3:17260340-17260359 | MS.gene90143:intron | 35.0% | |
| TTGGATTGAGATTTCAGTAG+AGG | - | chr2.3:17258317-17258336 | MS.gene90143:intron | 35.0% | |
| ! | AAAGAGCATAACATACCTGT+CGG | + | chr2.3:17259766-17259785 | None:intergenic | 35.0% |
| ! | CAATTCTAGAGGCAAAAACT+TGG | - | chr2.3:17259228-17259247 | MS.gene90143:intron | 35.0% |
| ! | CTTTTCCTTTCAGAATGACA+AGG | - | chr2.3:17260021-17260040 | MS.gene90143:intron | 35.0% |
| ! | GTTTGGATTGGGATTCAAAT+TGG | - | chr2.3:17260357-17260376 | MS.gene90143:intron | 35.0% |
| ! | TACATGACTTTTCCTAAGAC+TGG | + | chr2.3:17258453-17258472 | None:intergenic | 35.0% |
| ! | TAGTATTGGGAACTTATGTG+AGG | - | chr2.3:17259643-17259662 | MS.gene90143:CDS | 35.0% |
| ! | TATGAGGCAAAACTGATTTC+AGG | + | chr2.3:17259373-17259392 | None:intergenic | 35.0% |
| ! | TGGTGGTATAATCTCTGAAA+TGG | + | chr2.3:17257036-17257055 | None:intergenic | 35.0% |
| !! | GACTATGGTATTTCTAGTGA+CGG | + | chr2.3:17257101-17257120 | None:intergenic | 35.0% |
| !! | GTTGGTAACATGAAGTTTAG+GGG | - | chr2.3:17258503-17258522 | MS.gene90143:intron | 35.0% |
| !! | GTTGTTGATTCATCTGATGA+AGG | - | chr2.3:17256813-17256832 | MS.gene90143:CDS | 35.0% |
| !! | TTCTTTGCCTCATTTTTGGA+GGG | + | chr2.3:17260312-17260331 | None:intergenic | 35.0% |
| !! | TTTCTTTGCCTCATTTTTGG+AGG | + | chr2.3:17260313-17260332 | None:intergenic | 35.0% |
| !!! | ATCTCCACTTTTGAGACTTT+TGG | + | chr2.3:17258479-17258498 | None:intergenic | 35.0% |
| !!! | GGATCATTTTGGTTTCTATC+CGG | + | chr2.3:17261006-17261025 | None:intergenic | 35.0% |
| !!! | GTGTTGCCAGAATTAGTTTT+AGG | - | chr2.3:17260615-17260634 | MS.gene90143:intron | 35.0% |
| AAGTTGAACTAGTCCCACAT+CGG | - | chr2.3:17257395-17257414 | MS.gene90143:intron | 40.0% | |
| AATTGTGAACCGTCTGACTA+TGG | + | chr2.3:17257116-17257135 | None:intergenic | 40.0% | |
| ACATCTTCCATTACAGCTGA+AGG | - | chr2.3:17258659-17258678 | MS.gene90143:intron | 40.0% | |
| AGCAGAAGAAGATACTTCAG+AGG | + | chr2.3:17260831-17260850 | None:intergenic | 40.0% | |
| ATGTGGTAGCTATAGCTAAG+CGG | - | chr2.3:17257628-17257647 | MS.gene90143:intron | 40.0% | |
| ATGTTGCTAAGTATCCGATG+TGG | + | chr2.3:17257412-17257431 | None:intergenic | 40.0% | |
| ATTCATCTGATGAAGGAGAG+CGG | - | chr2.3:17256820-17256839 | MS.gene90143:CDS | 40.0% | |
| CAGTACTCTTCTGGTACTTA+CGG | + | chr2.3:17261281-17261300 | None:intergenic | 40.0% | |
| CGATGCGATTGAAATGGAAA+TGG | + | chr2.3:17258224-17258243 | None:intergenic | 40.0% | |
| CTTAGTATCTTCGTCAATGG+CGG | + | chr2.3:17258186-17258205 | None:intergenic | 40.0% | |
| CTTGTATGGTTGACTAAGGA+GGG | - | chr2.3:17260510-17260529 | MS.gene90143:intron | 40.0% | |
| GACATCCTTGTCATTCTGAA+AGG | + | chr2.3:17260029-17260048 | None:intergenic | 40.0% | |
| GACCTTAGTATCTTCGTCAA+TGG | + | chr2.3:17258189-17258208 | None:intergenic | 40.0% | |
| GCCGTAATATATACATGCTG+AGG | + | chr2.3:17257852-17257871 | None:intergenic | 40.0% | |
| GGACCAGCATAAATATATGG+AGG | - | chr2.3:17258376-17258395 | MS.gene90143:intron | 40.0% | |
| GTGTGCAATTCATGCTAAGA+GGG | - | chr2.3:17261553-17261572 | MS.gene90143:CDS | 40.0% | |
| GTGTGTTCTTTGGTATCTGA+TGG | - | chr2.3:17260335-17260354 | MS.gene90143:intron | 40.0% | |
| GTTTGTTTCAAAGCAGCAGA+GGG | - | chr2.3:17258589-17258608 | MS.gene90143:CDS | 40.0% | |
| TAGTGAGTAGTACCAGTCTT+AGG | - | chr2.3:17258438-17258457 | MS.gene90143:CDS | 40.0% | |
| TATAGTGTTTGATGGGGGTA+GGG | - | chr2.3:17259424-17259443 | MS.gene90143:intron | 40.0% | |
| TATTTCGCCCTCCAAAAATG+AGG | - | chr2.3:17260302-17260321 | MS.gene90143:intron | 40.0% | |
| TCAAAAGCTCAGTACTCTTC+TGG | + | chr2.3:17261290-17261309 | None:intergenic | 40.0% | |
| TCAAAAGTGGAGATGGATGT+TGG | - | chr2.3:17258485-17258504 | MS.gene90143:CDS | 40.0% | |
| TCAATGCTCTCTTATCAGTG+AGG | + | chr2.3:17257370-17257389 | None:intergenic | 40.0% | |
| TCAATGGTCCTGCCTATTAA+GGG | + | chr2.3:17257508-17257527 | None:intergenic | 40.0% | |
| TCCATTACAGCTGAAGGAAA+AGG | - | chr2.3:17258665-17258684 | MS.gene90143:intron | 40.0% | |
| TCTTGTATGGTTGACTAAGG+AGG | - | chr2.3:17260509-17260528 | MS.gene90143:intron | 40.0% | |
| TGGTGTATAGTGTTTGATGG+GGG | - | chr2.3:17259419-17259438 | MS.gene90143:intron | 40.0% | |
| TGTGTGCAATTCATGCTAAG+AGG | - | chr2.3:17261552-17261571 | MS.gene90143:CDS | 40.0% | |
| TGTTGCTAAGTATCCGATGT+GGG | + | chr2.3:17257411-17257430 | None:intergenic | 40.0% | |
| TTACCTGGTTGGATTGTTTG+AGG | - | chr2.3:17261520-17261539 | MS.gene90143:CDS | 40.0% | |
| TTCAATGGTCCTGCCTATTA+AGG | + | chr2.3:17257509-17257528 | None:intergenic | 40.0% | |
| TTGAGCTCCCTAGTATATGT+AGG | - | chr2.3:17257565-17257584 | MS.gene90143:intron | 40.0% | |
| TTGCTTATGCACCATGCATA+AGG | + | chr2.3:17257899-17257918 | None:intergenic | 40.0% | |
| ! | AGACGGTTCACAATTCGTTT+TGG | - | chr2.3:17257121-17257140 | MS.gene90143:intron | 40.0% |
| ! | AGCTGTAATGGAAGATGTCT+TGG | + | chr2.3:17258657-17258676 | None:intergenic | 40.0% |
| ! | AGTTTGTTTCAAAGCAGCAG+AGG | - | chr2.3:17258588-17258607 | MS.gene90143:CDS | 40.0% |
| ! | CTTCTGGGAAATCTAGTGTT+GGG | - | chr2.3:17258537-17258556 | MS.gene90143:intron | 40.0% |
| ! | GGTATCTGATGGTTTGGATT+GGG | - | chr2.3:17260346-17260365 | MS.gene90143:intron | 40.0% |
| ! | GTGCAGCATTAGGATCATTT+TGG | + | chr2.3:17261017-17261036 | None:intergenic | 40.0% |
| ! | TCCTTTTCCTTCAGCTGTAA+TGG | + | chr2.3:17258669-17258688 | None:intergenic | 40.0% |
| ! | TCTTCTGGGAAATCTAGTGT+TGG | - | chr2.3:17258536-17258555 | MS.gene90143:intron | 40.0% |
| ! | TGCTGGGTTTACATTTTCAC+AGG | - | chr2.3:17259039-17259058 | MS.gene90143:intron | 40.0% |
| ! | TGGTATCTGATGGTTTGGAT+TGG | - | chr2.3:17260345-17260364 | MS.gene90143:intron | 40.0% |
| !! | CTACTAGTAGTGGACAGTAT+TGG | + | chr2.3:17257771-17257790 | None:intergenic | 40.0% |
| !! | CTTCCACTTTTCTGATCACA+TGG | + | chr2.3:17258413-17258432 | None:intergenic | 40.0% |
| !! | TCACAATTCGTTTTGGTACG+TGG | - | chr2.3:17257128-17257147 | MS.gene90143:intron | 40.0% |
| !! | TTTTTGACTCCTCCAGTAGT+AGG | + | chr2.3:17261074-17261093 | None:intergenic | 40.0% |
| AAGTGAAAAAGTGGGATGGG+TGG | - | chr2.3:17257813-17257832 | MS.gene90143:intron | 45.0% | |
| ACAGGCAAAGCAAGTTCATC+CGG | - | chr2.3:17260984-17261003 | MS.gene90143:intron | 45.0% | |
| ACGAAATTACCGAAGTGCGA+CGG | + | chr2.3:17261120-17261139 | None:intergenic | 45.0% | |
| ACTCCAGTTACTCCTACTAC+TGG | - | chr2.3:17261059-17261078 | MS.gene90143:intron | 45.0% | |
| AGTAGAAGCCTCAAGAGTTC+AGG | - | chr2.3:17258355-17258374 | MS.gene90143:intron | 45.0% | |
| AGTCAATTCGCTTGGGTTTG+TGG | - | chr2.3:17257210-17257229 | MS.gene90143:intron | 45.0% | |
| AGTGAAAAAGTGGGATGGGT+GGG | - | chr2.3:17257814-17257833 | MS.gene90143:intron | 45.0% | |
| ATGCTAACACAGATCCGAAC+CGG | + | chr2.3:17259097-17259116 | None:intergenic | 45.0% | |
| CGAATGCGATGCGATTGAAA+TGG | + | chr2.3:17258230-17258249 | None:intergenic | 45.0% | |
| CGCCATTGACGAAGATACTA+AGG | - | chr2.3:17258184-17258203 | MS.gene90143:intron | 45.0% | |
| GAAATGGATCCTCTACTCAG+TGG | + | chr2.3:17257020-17257039 | None:intergenic | 45.0% | |
| GAGGGTGACAATTATGCCAA+AGG | - | chr2.3:17261571-17261590 | MS.gene90143:CDS | 45.0% | |
| GATAAGAACAGGTGCAATCC+TGG | - | chr2.3:17258623-17258642 | MS.gene90143:intron | 45.0% | |
| GGCTCGTATAAAACAGGGAT+TGG | - | chr2.3:17258826-17258845 | MS.gene90143:intron | 45.0% | |
| GGTTGTTAGTACCTATCAGG+CGG | - | chr2.3:17259547-17259566 | MS.gene90143:intron | 45.0% | |
| GTATAGTGTTTGATGGGGGT+AGG | - | chr2.3:17259423-17259442 | MS.gene90143:intron | 45.0% | |
| TATGGTTGACTAAGGAGGGT+TGG | - | chr2.3:17260514-17260533 | MS.gene90143:intron | 45.0% | |
| TGAAACTGGTCAAGGAGACA+AGG | - | chr2.3:17259911-17259930 | MS.gene90143:CDS | 45.0% | |
| TGAGCCAGATGTACTGGATT+TGG | + | chr2.3:17260230-17260249 | None:intergenic | 45.0% | |
| TGCGTTAATCAGGCGAAAAC+CGG | - | chr2.3:17256845-17256864 | MS.gene90143:CDS | 45.0% | |
| TGTCCTCAAACAATCCAACC+AGG | + | chr2.3:17261526-17261545 | None:intergenic | 45.0% | |
| TTTGGTACGTGGTACAGGTT+CGG | - | chr2.3:17257139-17257158 | MS.gene90143:intron | 45.0% | |
| ! | AATGCTACAGGTGTTGCGTA+TGG | - | chr2.3:17259526-17259545 | MS.gene90143:intron | 45.0% |
| ! | AGAAAAACGAAGACTGGCCA+AGG | - | chr2.3:17256965-17256984 | MS.gene90143:intron | 45.0% |
| ! | GAAAAACGAAGACTGGCCAA+GGG | - | chr2.3:17256966-17256985 | MS.gene90143:intron | 45.0% |
| !! | TTCGTTTTGGTACGTGGTAC+AGG | - | chr2.3:17257134-17257153 | MS.gene90143:intron | 45.0% |
| !!! | GTGTTTTTTGCCGTCGTTGA+TGG | + | chr2.3:17258037-17258056 | None:intergenic | 45.0% |
| !!! | TTTTTTGCCGTCGTTGATGG+AGG | + | chr2.3:17258034-17258053 | None:intergenic | 45.0% |
| AAACCTCACTGTTACCGTCC+TGG | - | chr2.3:17261092-17261111 | MS.gene90143:intron | 50.0% | |
| ACAACCACCTCCATCAACGA+CGG | - | chr2.3:17258024-17258043 | MS.gene90143:intron | 50.0% | |
| ACATGCTGAGGTTCGAATCC+AGG | + | chr2.3:17257840-17257859 | None:intergenic | 50.0% | |
| ACGGCAAAAAACACCGACAC+CGG | - | chr2.3:17258043-17258062 | MS.gene90143:intron | 50.0% | |
| AGCTATAGCTAAGCGGTAGC+TGG | - | chr2.3:17257635-17257654 | MS.gene90143:intron | 50.0% | |
| AGGGGTCGTAAATCGTCTTC+TGG | - | chr2.3:17258521-17258540 | MS.gene90143:intron | 50.0% | |
| ATCGAAGCAGAGGAGTGGTT+CGG | + | chr2.3:17258144-17258163 | None:intergenic | 50.0% | |
| ATGCTGGTCCTGAACTCTTG+AGG | + | chr2.3:17258366-17258385 | None:intergenic | 50.0% | |
| ATTCGAGAGACCCCTTGATG+AGG | - | chr2.3:17260114-17260133 | MS.gene90143:intron | 50.0% | |
| CAAGACGATTGGGACTTCTC+AGG | - | chr2.3:17256875-17256894 | MS.gene90143:intron | 50.0% | |
| CAGTTGTGAGCCAGATGTAC+TGG | + | chr2.3:17260236-17260255 | None:intergenic | 50.0% | |
| CCAATCGTCTTGCTTGTGTC+CGG | + | chr2.3:17256867-17256886 | None:intergenic | 50.0% | |
| CCAGTTACTCCTACTACTGG+AGG | - | chr2.3:17261062-17261081 | MS.gene90143:intron | 50.0% | |
| CCATGCAGTTCTTGCACTTC+AGG | - | chr2.3:17261484-17261503 | MS.gene90143:CDS | 50.0% | |
| CCTCCAGTAGTAGGAGTAAC+TGG | + | chr2.3:17261065-17261084 | None:intergenic | 50.0% | |
| CCTGAAGTGCAAGAACTGCA+TGG | + | chr2.3:17261487-17261506 | None:intergenic | 50.0% | |
| CGAGCAAGCTGAATGTCCTT+TGG | + | chr2.3:17261590-17261609 | None:intergenic | 50.0% | |
| CGGACACAAGCAAGACGATT+GGG | - | chr2.3:17256865-17256884 | MS.gene90143:CDS | 50.0% | |
| CTCCACTTCAAGTAACGTCG+TGG | - | chr2.3:17256755-17256774 | MS.gene90143:CDS | 50.0% | |
| GACGCTGAAATGGAAGCTTG+CGG | + | chr2.3:17261314-17261333 | None:intergenic | 50.0% | |
| GAGTTCCCTGAATCAGGAAC+TGG | - | chr2.3:17256732-17256751 | MS.gene90143:CDS | 50.0% | |
| GATAACTTCTCCACCTGCAC+TGG | + | chr2.3:17256909-17256928 | None:intergenic | 50.0% | |
| GGGGTCGTAAATCGTCTTCT+GGG | - | chr2.3:17258522-17258541 | MS.gene90143:intron | 50.0% | |
| GGTGCGGCTCGTATAAAACA+GGG | - | chr2.3:17258821-17258840 | MS.gene90143:intron | 50.0% | |
| GTATACGAGTACCCGTCATG+CGG | - | chr2.3:17260065-17260084 | MS.gene90143:intron | 50.0% | |
| GTGCTTCCCATGCCCTTAAT+AGG | - | chr2.3:17257493-17257512 | MS.gene90143:intron | 50.0% | |
| GTGGTACAGGTTCGGATATG+CGG | - | chr2.3:17257147-17257166 | MS.gene90143:intron | 50.0% | |
| GTTTGATGGGGGTAGGGTTT+AGG | - | chr2.3:17259430-17259449 | MS.gene90143:intron | 50.0% | |
| TATACGAGTACCCGTCATGC+GGG | - | chr2.3:17260066-17260085 | MS.gene90143:intron | 50.0% | |
| TCACGGACAAGACGCTGAAA+TGG | + | chr2.3:17261324-17261343 | None:intergenic | 50.0% | |
| TGCACTTCAGGAAGCAACTG+AGG | - | chr2.3:17261496-17261515 | MS.gene90143:CDS | 50.0% | |
| TGCCACGACGTTACTTGAAG+TGG | + | chr2.3:17256760-17256779 | None:intergenic | 50.0% | |
| TGGAGCCAGTTCCTGATTCA+GGG | + | chr2.3:17256740-17256759 | None:intergenic | 50.0% | |
| TGGTGCGGCTCGTATAAAAC+AGG | - | chr2.3:17258820-17258839 | MS.gene90143:intron | 50.0% | |
| TTCCCATGCCCTTAATAGGC+AGG | - | chr2.3:17257497-17257516 | MS.gene90143:intron | 50.0% | |
| ! | GTCCTGCCTATTAAGGGCAT+GGG | + | chr2.3:17257502-17257521 | None:intergenic | 50.0% |
| ! | TGGTTCGGGAGATTTGTGAG+CGG | + | chr2.3:17258129-17258148 | None:intergenic | 50.0% |
| !!! | GGTTGTGGTGGTGGTGATTT+TGG | + | chr2.3:17258010-17258029 | None:intergenic | 50.0% |
| AGGAGATCGAAGCAGAGGAG+TGG | + | chr2.3:17258149-17258168 | None:intergenic | 55.0% | |
| AGTACCTATCAGGCGGCTAG+TGG | - | chr2.3:17259554-17259573 | MS.gene90143:intron | 55.0% | |
| CAGAGAGGAGATCGAAGCAG+AGG | + | chr2.3:17258154-17258173 | None:intergenic | 55.0% | |
| CAGTACCCCAACAAGGCAAG+GGG | - | chr2.3:17256778-17256797 | MS.gene90143:CDS | 55.0% | |
| CCGGACACAAGCAAGACGAT+TGG | - | chr2.3:17256864-17256883 | MS.gene90143:CDS | 55.0% | |
| GAACCACAGCCACTGAGTAG+AGG | - | chr2.3:17257008-17257027 | MS.gene90143:intron | 55.0% | |
| GAGAGCGGAGTGCGTTAATC+AGG | - | chr2.3:17256835-17256854 | MS.gene90143:CDS | 55.0% | |
| GATCCTCTACTCAGTGGCTG+TGG | + | chr2.3:17257014-17257033 | None:intergenic | 55.0% | |
| GATTGGGACTTCTCAGGTGC+AGG | - | chr2.3:17256881-17256900 | MS.gene90143:intron | 55.0% | |
| GCAAAAAACACCGACACCGG+CGG | - | chr2.3:17258046-17258065 | MS.gene90143:intron | 55.0% | |
| GCAACTGAGGCTTACCTGGT+TGG | - | chr2.3:17261509-17261528 | MS.gene90143:CDS | 55.0% | |
| GCAGTACCCCAACAAGGCAA+GGG | - | chr2.3:17256777-17256796 | MS.gene90143:CDS | 55.0% | |
| GGAAGCAACTGAGGCTTACC+TGG | - | chr2.3:17261505-17261524 | MS.gene90143:CDS | 55.0% | |
| GGTCCTGCCTATTAAGGGCA+TGG | + | chr2.3:17257503-17257522 | None:intergenic | 55.0% | |
| GTGCAAGAACTGCATGGCTC+TGG | + | chr2.3:17261481-17261500 | None:intergenic | 55.0% | |
| GTGGAGCCAGTTCCTGATTC+AGG | + | chr2.3:17256741-17256760 | None:intergenic | 55.0% | |
| GTTCCAGGACGGTAACAGTG+AGG | + | chr2.3:17261098-17261117 | None:intergenic | 55.0% | |
| TCAGTGAGTCACGAGTGACG+AGG | + | chr2.3:17260736-17260755 | None:intergenic | 55.0% | |
| TCGAAGCAGAGGAGTGGTTC+GGG | + | chr2.3:17258143-17258162 | None:intergenic | 55.0% | |
| TGGCGGAGATGAGATCAGAG+AGG | + | chr2.3:17258169-17258188 | None:intergenic | 55.0% | |
| TTCGGGAGATTTGTGAGCGG+CGG | + | chr2.3:17258126-17258145 | None:intergenic | 55.0% | |
| ! | GTCGTTGATGGAGGTGGTTG+TGG | + | chr2.3:17258025-17258044 | None:intergenic | 55.0% |
| ! | GTTGATGGAGGTGGTTGTGG+TGG | + | chr2.3:17258022-17258041 | None:intergenic | 55.0% |
| ! | TTTGCCGTCGTTGATGGAGG+TGG | + | chr2.3:17258031-17258050 | None:intergenic | 55.0% |
| AAAAGTGGGATGGGTGGGCC+TGG | - | chr2.3:17257819-17257838 | MS.gene90143:intron | 60.0% | |
| ACCCCAACAAGGCAAGGGGA+AGG | - | chr2.3:17256782-17256801 | MS.gene90143:CDS | 60.0% | |
| AGCTCCACTAGCCGCCTGAT+AGG | + | chr2.3:17259561-17259580 | None:intergenic | 60.0% | |
| AGTACGCCGAACCGGGATAG+CGG | + | chr2.3:17258074-17258093 | None:intergenic | 60.0% | |
| AGTCACCTCTGCCTTGCCCT+TGG | + | chr2.3:17256985-17257004 | None:intergenic | 60.0% | |
| CCAACAAGGCAAGGGGAAGG+CGG | - | chr2.3:17256785-17256804 | MS.gene90143:CDS | 60.0% | |
| CTCTGCATGAGCCCGCATGA+CGG | + | chr2.3:17260080-17260099 | None:intergenic | 60.0% | |
| GAAGTGCGACGGTTCCAGGA+CGG | + | chr2.3:17261109-17261128 | None:intergenic | 60.0% | |
| GATGGAGGTGGTTGTGGTGG+TGG | + | chr2.3:17258019-17258038 | None:intergenic | 60.0% | |
| GCTTGAGCTGCAGACTCGAG+TGG | - | chr2.3:17259601-17259620 | MS.gene90143:intron | 60.0% | |
| GGCAGTACCCCAACAAGGCA+AGG | - | chr2.3:17256776-17256795 | MS.gene90143:CDS | 60.0% | |
| GTCCTGGAACCGTCGCACTT+CGG | - | chr2.3:17261108-17261127 | MS.gene90143:intron | 60.0% | |
| GTCGTGGCAGTACCCCAACA+AGG | - | chr2.3:17256771-17256790 | MS.gene90143:CDS | 60.0% | |
| TACCGAAGTGCGACGGTTCC+AGG | + | chr2.3:17261113-17261132 | None:intergenic | 60.0% | |
| TATCAGGCGGCTAGTGGAGC+TGG | - | chr2.3:17259560-17259579 | MS.gene90143:intron | 60.0% | |
| TCTGCATGAGCCCGCATGAC+GGG | + | chr2.3:17260079-17260098 | None:intergenic | 60.0% | |
| ! | ACGAAGACTGGCCAAGGGCA+AGG | - | chr2.3:17256971-17256990 | MS.gene90143:intron | 60.0% |
| ! | CAGCTTGCTCGTCGCATTCG+CGG | - | chr2.3:17261599-17261618 | MS.gene90143:CDS | 60.0% |
| ! | CGCCTTCCCCTTGCCTTGTT+GGG | + | chr2.3:17256787-17256806 | None:intergenic | 60.0% |
| ! | GCCTTCCCCTTGCCTTGTTG+GGG | + | chr2.3:17256786-17256805 | None:intergenic | 60.0% |
| !! | TGGAGCTGGTGCTGCTGCAA+TGG | - | chr2.3:17259574-17259593 | MS.gene90143:intron | 60.0% |
| ACAAGGCAAGGGGAAGGCGG+TGG | - | chr2.3:17256788-17256807 | MS.gene90143:CDS | 65.0% | |
| ACTGGCCAAGGGCAAGGCAG+AGG | - | chr2.3:17256977-17256996 | MS.gene90143:intron | 65.0% | |
| CCGCCTTCCCCTTGCCTTGT+TGG | + | chr2.3:17256788-17256807 | None:intergenic | 65.0% | |
| GGGCAAGGCAGAGGTGACTG+AGG | - | chr2.3:17256986-17257005 | MS.gene90143:intron | 65.0% | |
| GTGAGCGGCGGAAGCGACTA+TGG | + | chr2.3:17258114-17258133 | None:intergenic | 65.0% | |
| TCAGGTGCAGGTGCCAGTGC+AGG | - | chr2.3:17256893-17256912 | MS.gene90143:intron | 65.0% | |
| !! | ATCCCGGTTCGGCGTACTGG+TGG | - | chr2.3:17258076-17258095 | MS.gene90143:intron | 65.0% |
| !! | GCTATCCCGGTTCGGCGTAC+TGG | - | chr2.3:17258073-17258092 | MS.gene90143:intron | 65.0% |
| AGGCAAGGGGAAGGCGGTGG+TGG | - | chr2.3:17256791-17256810 | MS.gene90143:CDS | 70.0% | |
| CGCCACCAGTACGCCGAACC+GGG | + | chr2.3:17258081-17258100 | None:intergenic | 70.0% | |
| GCGCCACCAGTACGCCGAAC+CGG | + | chr2.3:17258082-17258101 | None:intergenic | 70.0% | |
| GCGGCACCGCTATCCCGGTT+CGG | - | chr2.3:17258065-17258084 | MS.gene90143:intron | 70.0% | |
| GGTGCAGGTGCCAGTGCAGG+TGG | - | chr2.3:17256896-17256915 | MS.gene90143:intron | 70.0% | |
| !! | AACCGGGATAGCGGTGCCGC+CGG | + | chr2.3:17258065-17258084 | None:intergenic | 70.0% |
| !! | GATAGCGGTGCCGCCGGTGT+CGG | + | chr2.3:17258059-17258078 | None:intergenic | 70.0% |
| CACCGGCGGCACCGCTATCC+CGG | - | chr2.3:17258060-17258079 | MS.gene90143:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 17256717 | 17261634 | 17256717 | ID=MS.gene90143 |
| chr2.3 | mRNA | 17256717 | 17261634 | 17256717 | ID=MS.gene90143.t1;Parent=MS.gene90143 |
| chr2.3 | exon | 17261252 | 17261634 | 17261252 | ID=MS.gene90143.t1.exon1;Parent=MS.gene90143.t1 |
| chr2.3 | CDS | 17261252 | 17261634 | 17261252 | ID=cds.MS.gene90143.t1;Parent=MS.gene90143.t1 |
| chr2.3 | exon | 17260743 | 17260832 | 17260743 | ID=MS.gene90143.t1.exon2;Parent=MS.gene90143.t1 |
| chr2.3 | CDS | 17260743 | 17260832 | 17260743 | ID=cds.MS.gene90143.t1;Parent=MS.gene90143.t1 |
| chr2.3 | exon | 17259624 | 17260017 | 17259624 | ID=MS.gene90143.t1.exon3;Parent=MS.gene90143.t1 |
| chr2.3 | CDS | 17259624 | 17260017 | 17259624 | ID=cds.MS.gene90143.t1;Parent=MS.gene90143.t1 |
| chr2.3 | exon | 17258729 | 17258815 | 17258729 | ID=MS.gene90143.t1.exon4;Parent=MS.gene90143.t1 |
| chr2.3 | CDS | 17258729 | 17258815 | 17258729 | ID=cds.MS.gene90143.t1;Parent=MS.gene90143.t1 |
| chr2.3 | exon | 17258582 | 17258626 | 17258582 | ID=MS.gene90143.t1.exon5;Parent=MS.gene90143.t1 |
| chr2.3 | CDS | 17258582 | 17258626 | 17258582 | ID=cds.MS.gene90143.t1;Parent=MS.gene90143.t1 |
| chr2.3 | exon | 17258409 | 17258504 | 17258409 | ID=MS.gene90143.t1.exon6;Parent=MS.gene90143.t1 |
| chr2.3 | CDS | 17258409 | 17258504 | 17258409 | ID=cds.MS.gene90143.t1;Parent=MS.gene90143.t1 |
| chr2.3 | exon | 17258216 | 17258317 | 17258216 | ID=MS.gene90143.t1.exon7;Parent=MS.gene90143.t1 |
| chr2.3 | CDS | 17258216 | 17258317 | 17258216 | ID=cds.MS.gene90143.t1;Parent=MS.gene90143.t1 |
| chr2.3 | exon | 17257304 | 17257363 | 17257304 | ID=MS.gene90143.t1.exon8;Parent=MS.gene90143.t1 |
| chr2.3 | CDS | 17257304 | 17257363 | 17257304 | ID=cds.MS.gene90143.t1;Parent=MS.gene90143.t1 |
| chr2.3 | exon | 17256989 | 17257021 | 17256989 | ID=MS.gene90143.t1.exon9;Parent=MS.gene90143.t1 |
| chr2.3 | CDS | 17256989 | 17257021 | 17256989 | ID=cds.MS.gene90143.t1;Parent=MS.gene90143.t1 |
| chr2.3 | exon | 17256717 | 17256887 | 17256717 | ID=MS.gene90143.t1.exon10;Parent=MS.gene90143.t1 |
| chr2.3 | CDS | 17256717 | 17256887 | 17256717 | ID=cds.MS.gene90143.t1;Parent=MS.gene90143.t1 |
| Gene Sequence |
| Protein sequence |