Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90347.t1 | XP_024628620.1 | 90 | 330 | 24 | 1 | 1 | 330 | 1 | 321 | 6.30E-157 | 563.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90347.t1 | Q9FHE1 | 38.5 | 192 | 100 | 6 | 68 | 245 | 280 | 467 | 1.7e-25 | 118.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90347.t1 | G7JIQ3 | 85.2 | 330 | 40 | 1 | 1 | 330 | 1 | 321 | 1.1e-145 | 525.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene90347 | MS.gene90825 | PPI |
| MS.gene90347 | MS.gene97346 | PPI |
| MS.gene90347 | MS.gene029093 | PPI |
| MS.gene90347 | MS.gene066439 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90347.t1 | MTR_4g083510 | 85.455 | 330 | 39 | 1 | 1 | 330 | 1 | 321 | 0.0 | 555 |
| MS.gene90347.t1 | MTR_0867s0010 | 77.812 | 329 | 63 | 2 | 1 | 329 | 1 | 319 | 7.91e-174 | 485 |
| MS.gene90347.t1 | MTR_4g063670 | 71.515 | 330 | 84 | 2 | 1 | 330 | 1 | 320 | 1.20e-163 | 459 |
| MS.gene90347.t1 | MTR_1g051185 | 61.794 | 301 | 80 | 2 | 1 | 301 | 1 | 266 | 5.28e-117 | 338 |
| MS.gene90347.t1 | MTR_8g015750 | 69.458 | 203 | 45 | 2 | 127 | 329 | 1 | 186 | 6.81e-85 | 254 |
| MS.gene90347.t1 | MTR_3g069460 | 62.842 | 183 | 59 | 1 | 1 | 183 | 1 | 174 | 5.58e-78 | 236 |
| MS.gene90347.t1 | MTR_7g088160 | 40.964 | 332 | 156 | 11 | 20 | 329 | 75 | 388 | 1.93e-60 | 198 |
| MS.gene90347.t1 | MTR_7g107340 | 40.769 | 260 | 123 | 10 | 78 | 329 | 98 | 334 | 7.57e-43 | 151 |
| MS.gene90347.t1 | MTR_8g015740 | 72.527 | 91 | 16 | 1 | 1 | 91 | 49 | 130 | 1.86e-36 | 128 |
| MS.gene90347.t1 | MTR_2g023560 | 79.032 | 62 | 13 | 0 | 55 | 116 | 57 | 118 | 1.42e-27 | 104 |
| MS.gene90347.t1 | MTR_7g114170 | 32.166 | 314 | 124 | 12 | 18 | 328 | 61 | 288 | 1.67e-22 | 95.9 |
| MS.gene90347.t1 | MTR_6g081150 | 37.179 | 156 | 56 | 5 | 79 | 232 | 40 | 155 | 1.41e-20 | 87.8 |
| MS.gene90347.t1 | MTR_5g044920 | 56.757 | 74 | 23 | 1 | 43 | 116 | 17 | 81 | 1.13e-17 | 77.4 |
| MS.gene90347.t1 | MTR_4g013220 | 26.178 | 191 | 134 | 4 | 20 | 208 | 53 | 238 | 2.12e-12 | 67.4 |
| MS.gene90347.t1 | MTR_5g066280 | 25.654 | 191 | 135 | 4 | 20 | 208 | 53 | 238 | 1.22e-11 | 65.1 |
| MS.gene90347.t1 | MTR_3g067785 | 25.654 | 191 | 135 | 4 | 20 | 208 | 53 | 238 | 1.29e-11 | 65.1 |
| MS.gene90347.t1 | MTR_4g026120 | 25.654 | 191 | 135 | 4 | 20 | 208 | 53 | 238 | 1.37e-11 | 65.1 |
| MS.gene90347.t1 | MTR_4g036435 | 25.654 | 191 | 135 | 4 | 20 | 208 | 53 | 238 | 1.37e-11 | 65.1 |
| MS.gene90347.t1 | MTR_2g072860 | 29.825 | 114 | 78 | 2 | 68 | 181 | 72 | 183 | 1.60e-11 | 64.7 |
| MS.gene90347.t1 | MTR_1g106885 | 25.238 | 210 | 137 | 5 | 20 | 227 | 114 | 305 | 1.75e-11 | 65.1 |
| MS.gene90347.t1 | MTR_2g022120 | 25.238 | 210 | 137 | 5 | 20 | 227 | 117 | 308 | 1.80e-11 | 65.1 |
| MS.gene90347.t1 | MTR_7g461350 | 27.966 | 118 | 83 | 2 | 64 | 181 | 136 | 251 | 2.22e-11 | 64.7 |
| MS.gene90347.t1 | MTR_6g016670 | 27.966 | 118 | 83 | 2 | 64 | 181 | 136 | 251 | 2.22e-11 | 64.7 |
| MS.gene90347.t1 | MTR_3g464310 | 27.966 | 118 | 83 | 2 | 64 | 181 | 136 | 251 | 2.22e-11 | 64.7 |
| MS.gene90347.t1 | MTR_3g464170 | 27.966 | 118 | 83 | 2 | 64 | 181 | 136 | 251 | 2.22e-11 | 64.7 |
| MS.gene90347.t1 | MTR_1g100375 | 27.966 | 118 | 83 | 2 | 64 | 181 | 136 | 251 | 2.22e-11 | 64.7 |
| MS.gene90347.t1 | MTR_6g051405 | 27.966 | 118 | 83 | 2 | 64 | 181 | 136 | 251 | 2.59e-11 | 64.3 |
| MS.gene90347.t1 | MTR_3g450670 | 27.966 | 118 | 83 | 2 | 64 | 181 | 132 | 247 | 2.60e-11 | 64.3 |
| MS.gene90347.t1 | MTR_1g471070 | 27.966 | 118 | 83 | 2 | 64 | 181 | 132 | 247 | 2.60e-11 | 64.3 |
| MS.gene90347.t1 | MTR_5g077245 | 26.590 | 173 | 120 | 4 | 38 | 208 | 124 | 291 | 2.62e-11 | 64.3 |
| MS.gene90347.t1 | MTR_6g092533 | 26.442 | 208 | 125 | 5 | 20 | 227 | 117 | 296 | 3.19e-11 | 64.3 |
| MS.gene90347.t1 | MTR_7g062380 | 26.012 | 173 | 121 | 4 | 38 | 208 | 6 | 173 | 4.42e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90347.t1 | AT5G41220 | 38.974 | 195 | 101 | 6 | 65 | 245 | 219 | 409 | 9.02e-32 | 125 |
| MS.gene90347.t1 | AT5G41220 | 40.000 | 195 | 99 | 7 | 65 | 245 | 227 | 417 | 1.10e-31 | 124 |
| MS.gene90347.t1 | AT5G41220 | 38.974 | 195 | 101 | 6 | 65 | 245 | 277 | 467 | 1.27e-31 | 125 |
| MS.gene90347.t1 | AT5G41240 | 37.838 | 185 | 102 | 6 | 60 | 232 | 272 | 455 | 1.11e-27 | 113 |
| MS.gene90347.t1 | AT3G47680 | 36.041 | 197 | 112 | 7 | 30 | 223 | 23 | 208 | 3.07e-26 | 106 |
| MS.gene90347.t1 | AT1G66235 | 29.947 | 187 | 115 | 5 | 61 | 232 | 7 | 192 | 2.17e-17 | 81.3 |
Find 58 sgRNAs with CRISPR-Local
Find 71 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATCTCTTGATCATTTAAT+TGG | 0.210422 | 7.4:+43880269 | None:intergenic |
| CCAACAAACTTTGAAATAGA+TGG | 0.279570 | 7.4:+43879932 | None:intergenic |
| CTTTGATCATTCCCAACAAT+TGG | 0.310977 | 7.4:+43880067 | None:intergenic |
| TTCAGCTTCTGGAGCATATT+CGG | 0.312536 | 7.4:-43879717 | MS.gene90347:CDS |
| AGAACAAAGAATTCAGCTTC+TGG | 0.340604 | 7.4:-43879728 | MS.gene90347:CDS |
| TCTTTCAAAGCATCAAATTT+CGG | 0.344398 | 7.4:+43879584 | None:intergenic |
| CATCTATTTCAAAGTTTGTT+GGG | 0.369114 | 7.4:-43879931 | MS.gene90347:CDS |
| GATGAACCGAAATGGCTTGC+AGG | 0.369514 | 7.4:-43879776 | MS.gene90347:CDS |
| AGAAAACCAAAGGCACTTAA+AGG | 0.372874 | 7.4:-43879977 | MS.gene90347:CDS |
| CATGCATTCTCAAGTGTGAA+TGG | 0.388314 | 7.4:+43879812 | None:intergenic |
| ACACAACCTGCAAGCCATTT+CGG | 0.388495 | 7.4:+43879770 | None:intergenic |
| GGTGGATTGTATTCACTTGT+TGG | 0.390206 | 7.4:+43879674 | None:intergenic |
| TGCAAAGAGTTGAAAATGAT+AGG | 0.394552 | 7.4:-43879457 | MS.gene90347:CDS |
| ATTTCAAAGGATCCAATTGT+TGG | 0.399370 | 7.4:-43880079 | MS.gene90347:CDS |
| CATCGACCTTTAAGTGCCTT+TGG | 0.399464 | 7.4:+43879971 | None:intergenic |
| TCATAATCTTGTAGTTGTCT+TGG | 0.400714 | 7.4:+43879377 | None:intergenic |
| ATGAGAAGTTCATCCTCCTT+TGG | 0.406782 | 7.4:+43880118 | None:intergenic |
| ATCCGAGAGCGACAACATTT+CGG | 0.416235 | 7.4:-43879870 | MS.gene90347:CDS |
| GGCTTGGAAACAATTAATCT+TGG | 0.423881 | 7.4:-43880220 | MS.gene90347:CDS |
| CCATCTATTTCAAAGTTTGT+TGG | 0.437206 | 7.4:-43879932 | MS.gene90347:CDS |
| TATTCACTTGTTGGTGTTGG+TGG | 0.444501 | 7.4:+43879683 | None:intergenic |
| TTTCAAAGGATCCAATTGTT+GGG | 0.450141 | 7.4:-43880078 | MS.gene90347:CDS |
| ACCTTGCACTCAAGATGGCT+TGG | 0.463183 | 7.4:-43880236 | MS.gene90347:CDS |
| ATGGCTTGCAGGTTGTGTAT+TGG | 0.465781 | 7.4:-43879765 | MS.gene90347:CDS |
| TATTGAGAGATGAACCGAAA+TGG | 0.474221 | 7.4:-43879784 | MS.gene90347:CDS |
| TTGTATTCACTTGTTGGTGT+TGG | 0.477883 | 7.4:+43879680 | None:intergenic |
| AGCCGAAATGTTGTCGCTCT+CGG | 0.477888 | 7.4:+43879868 | None:intergenic |
| ACAACGTCCAATCGGTCAAA+AGG | 0.486049 | 7.4:-43879651 | MS.gene90347:CDS |
| TCGGTCAAAAGGCGGCAAAA+AGG | 0.487566 | 7.4:-43879640 | MS.gene90347:CDS |
| ATGAACTTCTCATTCAATCA+TGG | 0.496152 | 7.4:-43880108 | MS.gene90347:CDS |
| TCCAAGCCATCTTGAGTGCA+AGG | 0.501328 | 7.4:+43880235 | None:intergenic |
| CTTGAAAATTCTTGTCGCGA+TGG | 0.504105 | 7.4:+43880002 | None:intergenic |
| GCAAAGAGTTGAAAATGATA+GGG | 0.522318 | 7.4:-43879456 | MS.gene90347:CDS |
| ATTCACTTGTTGGTGTTGGT+GGG | 0.524603 | 7.4:+43879684 | None:intergenic |
| TGAATGGTTCACGTACATCT+TGG | 0.533697 | 7.4:+43879828 | None:intergenic |
| AATCCACCACAACGTCCAAT+CGG | 0.536837 | 7.4:-43879659 | MS.gene90347:CDS |
| CCACAACCTTGCACTCAAGA+TGG | 0.538111 | 7.4:-43880241 | MS.gene90347:CDS |
| CCATCTTGAGTGCAAGGTTG+TGG | 0.539414 | 7.4:+43880241 | None:intergenic |
| CATTCACACTTGAGAATGCA+TGG | 0.543088 | 7.4:-43879811 | MS.gene90347:CDS |
| ATCATGGCTCAATATTTCAA+AGG | 0.547059 | 7.4:-43880092 | MS.gene90347:CDS |
| GAAGTTCAGATGAATAATAG+TGG | 0.553798 | 7.4:-43880295 | MS.gene90347:CDS |
| ATTAATCTTGGTGAAGAAGT+CGG | 0.569606 | 7.4:-43880208 | MS.gene90347:CDS |
| CATCTGAACTTCATGAGACA+TGG | 0.573227 | 7.4:+43880306 | None:intergenic |
| GGCGTGATTAGAGATAAATA+TGG | 0.592289 | 7.4:-43879344 | MS.gene90347:CDS |
| GTTGTCGCTCTAAAGAAAAG+TGG | 0.594037 | 7.4:-43879896 | MS.gene90347:CDS |
| AATAAGATTTAAACCAAAGG+AGG | 0.598325 | 7.4:-43880131 | MS.gene90347:CDS |
| TGACCGATTGGACGTTGTGG+TGG | 0.605293 | 7.4:+43879656 | None:intergenic |
| CAAAGGCACTTAAAGGTCGA+TGG | 0.612087 | 7.4:-43879970 | MS.gene90347:CDS |
| GAGTTGAAAATGATAGGGAA+AGG | 0.618261 | 7.4:-43879451 | MS.gene90347:CDS |
| AACAAGATTTCAACCAAAGG+AGG | 0.620863 | 7.4:-43880158 | MS.gene90347:CDS |
| GAAAATAAGATTTAAACCAA+AGG | 0.637971 | 7.4:-43880134 | MS.gene90347:CDS |
| GAAAACAAGATTTCAACCAA+AGG | 0.640671 | 7.4:-43880161 | MS.gene90347:CDS |
| GAAGGGAAAAGAAAAGCTTG+TGG | 0.644203 | 7.4:-43879618 | MS.gene90347:CDS |
| TGAAGAAGTCGGAGCTACAT+CGG | 0.648185 | 7.4:-43880197 | MS.gene90347:CDS |
| TGATTTAGAAATACTCACAA+AGG | 0.661251 | 7.4:-43879417 | MS.gene90347:CDS |
| ACGTCCAATCGGTCAAAAGG+CGG | 0.661921 | 7.4:-43879648 | MS.gene90347:CDS |
| ATTGTTGGGAATGATCAAAG+AGG | 0.674803 | 7.4:-43880064 | MS.gene90347:CDS |
| CAAGATTATGAATTTCTGTG+TGG | 0.676928 | 7.4:-43879365 | MS.gene90347:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAAATAAGATTTAAACCAA+AGG | - | chr7.4:43879504-43879523 | MS.gene90347:CDS | 20.0% |
| ! | AATAAGATTTAAACCAAAGG+AGG | - | chr7.4:43879507-43879526 | MS.gene90347:CDS | 25.0% |
| ! | CAATCTCTTGATCATTTAAT+TGG | + | chr7.4:43879372-43879391 | None:intergenic | 25.0% |
| ! | TGATTTAGAAATACTCACAA+AGG | - | chr7.4:43880221-43880240 | MS.gene90347:CDS | 25.0% |
| !! | CATCTATTTCAAAGTTTGTT+GGG | - | chr7.4:43879707-43879726 | MS.gene90347:CDS | 25.0% |
| !! | TCTTTCAAAGCATCAAATTT+CGG | + | chr7.4:43880057-43880076 | None:intergenic | 25.0% |
| !! | TGAATTCTTTGTTCTTTTTG+CGG | + | chr7.4:43879905-43879924 | None:intergenic | 25.0% |
| AATGGAGATAGAGAGAAAAA+AGG | - | chr7.4:43880146-43880165 | MS.gene90347:CDS | 30.0% | |
| ATCATGGCTCAATATTTCAA+AGG | - | chr7.4:43879546-43879565 | MS.gene90347:CDS | 30.0% | |
| ATGAACTTCTCATTCAATCA+TGG | - | chr7.4:43879530-43879549 | MS.gene90347:CDS | 30.0% | |
| ATTAATCTTGGTGAAGAAGT+CGG | - | chr7.4:43879430-43879449 | MS.gene90347:CDS | 30.0% | |
| ATTTCAAAGGATCCAATTGT+TGG | - | chr7.4:43879559-43879578 | MS.gene90347:CDS | 30.0% | |
| CAAGATTATGAATTTCTGTG+TGG | - | chr7.4:43880273-43880292 | MS.gene90347:CDS | 30.0% | |
| CCATCTATTTCAAAGTTTGT+TGG | - | chr7.4:43879706-43879725 | MS.gene90347:CDS | 30.0% | |
| GAAAACAAGATTTCAACCAA+AGG | - | chr7.4:43879477-43879496 | MS.gene90347:CDS | 30.0% | |
| GAAGTTCAGATGAATAATAG+TGG | - | chr7.4:43879343-43879362 | MS.gene90347:CDS | 30.0% | |
| GCAAAGAGTTGAAAATGATA+GGG | - | chr7.4:43880182-43880201 | MS.gene90347:CDS | 30.0% | |
| TCATAATCTTGTAGTTGTCT+TGG | + | chr7.4:43880264-43880283 | None:intergenic | 30.0% | |
| TGCAAAGAGTTGAAAATGAT+AGG | - | chr7.4:43880181-43880200 | MS.gene90347:CDS | 30.0% | |
| TTTCAAAGGATCCAATTGTT+GGG | - | chr7.4:43879560-43879579 | MS.gene90347:CDS | 30.0% | |
| ! | ATCAAAGAGGAGATAGTTTT+TGG | - | chr7.4:43879587-43879606 | MS.gene90347:CDS | 30.0% |
| ! | ATTTTCAACTCTTTGCAACT+CGG | + | chr7.4:43880178-43880197 | None:intergenic | 30.0% |
| !! | CCAACAAACTTTGAAATAGA+TGG | + | chr7.4:43879709-43879728 | None:intergenic | 30.0% |
| !! | TTTTCAAGAGAGAAAACCAA+AGG | - | chr7.4:43879651-43879670 | MS.gene90347:CDS | 30.0% |
| !!! | ACGTTTTGAGAGTGAAAAAA+TGG | - | chr7.4:43880128-43880147 | MS.gene90347:CDS | 30.0% |
| AACAAGATTTCAACCAAAGG+AGG | - | chr7.4:43879480-43879499 | MS.gene90347:CDS | 35.0% | |
| AGAACAAAGAATTCAGCTTC+TGG | - | chr7.4:43879910-43879929 | MS.gene90347:CDS | 35.0% | |
| ATTGTTGGGAATGATCAAAG+AGG | - | chr7.4:43879574-43879593 | MS.gene90347:CDS | 35.0% | |
| CTTTGATCATTCCCAACAAT+TGG | + | chr7.4:43879574-43879593 | None:intergenic | 35.0% | |
| GAGTTGAAAATGATAGGGAA+AGG | - | chr7.4:43880187-43880206 | MS.gene90347:CDS | 35.0% | |
| GGCGTGATTAGAGATAAATA+TGG | - | chr7.4:43880294-43880313 | MS.gene90347:CDS | 35.0% | |
| GGCTTGGAAACAATTAATCT+TGG | - | chr7.4:43879418-43879437 | MS.gene90347:CDS | 35.0% | |
| TATTGAGAGATGAACCGAAA+TGG | - | chr7.4:43879854-43879873 | MS.gene90347:CDS | 35.0% | |
| ! | TTCTTTGTTCTTTTTGCGGA+CGG | + | chr7.4:43879901-43879920 | None:intergenic | 35.0% |
| ! | TTGTATTCACTTGTTGGTGT+TGG | + | chr7.4:43879961-43879980 | None:intergenic | 35.0% |
| !! | AGAAAACCAAAGGCACTTAA+AGG | - | chr7.4:43879661-43879680 | MS.gene90347:CDS | 35.0% |
| !! | GATAGTTTTTGGAAGAGGAT+TGG | - | chr7.4:43879598-43879617 | MS.gene90347:CDS | 35.0% |
| !!! | AATCTTATTTTCGCCTCCTT+TGG | + | chr7.4:43879496-43879515 | None:intergenic | 35.0% |
| ATGAGAAGTTCATCCTCCTT+TGG | + | chr7.4:43879523-43879542 | None:intergenic | 40.0% | |
| CATGCATTCTCAAGTGTGAA+TGG | + | chr7.4:43879829-43879848 | None:intergenic | 40.0% | |
| CATTCACACTTGAGAATGCA+TGG | - | chr7.4:43879827-43879846 | MS.gene90347:CDS | 40.0% | |
| CTTGAAAATTCTTGTCGCGA+TGG | + | chr7.4:43879639-43879658 | None:intergenic | 40.0% | |
| GAAGGGAAAAGAAAAGCTTG+TGG | - | chr7.4:43880020-43880039 | MS.gene90347:CDS | 40.0% | |
| TGAATGGTTCACGTACATCT+TGG | + | chr7.4:43879813-43879832 | None:intergenic | 40.0% | |
| !! | ATTCACTTGTTGGTGTTGGT+GGG | + | chr7.4:43879957-43879976 | None:intergenic | 40.0% |
| !! | GAGGAGATAGTTTTTGGAAG+AGG | - | chr7.4:43879593-43879612 | MS.gene90347:CDS | 40.0% |
| !! | GGTGGATTGTATTCACTTGT+TGG | + | chr7.4:43879967-43879986 | None:intergenic | 40.0% |
| !! | GTTGTCGCTCTAAAGAAAAG+TGG | - | chr7.4:43879742-43879761 | MS.gene90347:CDS | 40.0% |
| !! | TATTCACTTGTTGGTGTTGG+TGG | + | chr7.4:43879958-43879977 | None:intergenic | 40.0% |
| !! | TTCAGCTTCTGGAGCATATT+CGG | - | chr7.4:43879921-43879940 | MS.gene90347:CDS | 40.0% |
| AATCCACCACAACGTCCAAT+CGG | - | chr7.4:43879979-43879998 | MS.gene90347:CDS | 45.0% | |
| ACAACGTCCAATCGGTCAAA+AGG | - | chr7.4:43879987-43880006 | MS.gene90347:CDS | 45.0% | |
| ACACAACCTGCAAGCCATTT+CGG | + | chr7.4:43879871-43879890 | None:intergenic | 45.0% | |
| ATCCGAGAGCGACAACATTT+CGG | - | chr7.4:43879768-43879787 | MS.gene90347:CDS | 45.0% | |
| CAAAAGGCGGCAAAAAGGAA+GGG | - | chr7.4:43880003-43880022 | MS.gene90347:CDS | 45.0% | |
| CATCGACCTTTAAGTGCCTT+TGG | + | chr7.4:43879670-43879689 | None:intergenic | 45.0% | |
| TCAAAAGGCGGCAAAAAGGA+AGG | - | chr7.4:43880002-43880021 | MS.gene90347:CDS | 45.0% | |
| TGAAGAAGTCGGAGCTACAT+CGG | - | chr7.4:43879441-43879460 | MS.gene90347:CDS | 45.0% | |
| ! | ATGGCTTGCAGGTTGTGTAT+TGG | - | chr7.4:43879873-43879892 | MS.gene90347:CDS | 45.0% |
| ! | TTTTGACCGATTGGACGTTG+TGG | + | chr7.4:43879988-43880007 | None:intergenic | 45.0% |
| !! | CAAAGGCACTTAAAGGTCGA+TGG | - | chr7.4:43879668-43879687 | MS.gene90347:CDS | 45.0% |
| ACCTTGCACTCAAGATGGCT+TGG | - | chr7.4:43879402-43879421 | MS.gene90347:CDS | 50.0% | |
| ACGTCCAATCGGTCAAAAGG+CGG | - | chr7.4:43879990-43880009 | MS.gene90347:CDS | 50.0% | |
| AGCCGAAATGTTGTCGCTCT+CGG | + | chr7.4:43879773-43879792 | None:intergenic | 50.0% | |
| CCACAACCTTGCACTCAAGA+TGG | - | chr7.4:43879397-43879416 | MS.gene90347:CDS | 50.0% | |
| CCATCTTGAGTGCAAGGTTG+TGG | + | chr7.4:43879400-43879419 | None:intergenic | 50.0% | |
| TCCAAGCCATCTTGAGTGCA+AGG | + | chr7.4:43879406-43879425 | None:intergenic | 50.0% | |
| TCGGTCAAAAGGCGGCAAAA+AGG | - | chr7.4:43879998-43880017 | MS.gene90347:CDS | 50.0% | |
| ! | GATGAACCGAAATGGCTTGC+AGG | - | chr7.4:43879862-43879881 | MS.gene90347:CDS | 50.0% |
| ! | TTTGCCGCCTTTTGACCGAT+TGG | + | chr7.4:43879997-43880016 | None:intergenic | 50.0% |
| TGACCGATTGGACGTTGTGG+TGG | + | chr7.4:43879985-43880004 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 43879334 | 43880326 | 43879334 | ID=MS.gene90347 |
| chr7.4 | mRNA | 43879334 | 43880326 | 43879334 | ID=MS.gene90347.t1;Parent=MS.gene90347 |
| chr7.4 | exon | 43879334 | 43880326 | 43879334 | ID=MS.gene90347.t1.exon1;Parent=MS.gene90347.t1 |
| chr7.4 | CDS | 43879334 | 43880326 | 43879334 | ID=cds.MS.gene90347.t1;Parent=MS.gene90347.t1 |
| Gene Sequence |
| Protein sequence |
