Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91126.t1 | XP_013466911.1 | 98.6 | 354 | 5 | 0 | 1 | 354 | 99 | 452 | 4.30E-204 | 720.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91126.t1 | Q99JW2 | 45.9 | 342 | 166 | 6 | 1 | 340 | 76 | 400 | 2.8e-82 | 307.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91126.t1 | A0A072VH72 | 98.6 | 354 | 5 | 0 | 1 | 354 | 99 | 452 | 3.1e-204 | 720.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050623 | MS.gene91126 | 0.810762 | 9.81E-51 | -1.69E-46 |
| MS.gene053008 | MS.gene91126 | -0.818696 | 1.71E-52 | -1.69E-46 |
| MS.gene055701 | MS.gene91126 | -0.809879 | 1.52E-50 | -1.69E-46 |
| MS.gene060802 | MS.gene91126 | -0.828912 | 6.91E-55 | -1.69E-46 |
| MS.gene060803 | MS.gene91126 | -0.80008 | 1.70E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene053778 | MS.gene91126 | PPI |
| MS.gene65894 | MS.gene91126 | PPI |
| MS.gene94073 | MS.gene91126 | PPI |
| MS.gene99939 | MS.gene91126 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91126.t1 | MTR_1g038920 | 98.588 | 354 | 5 | 0 | 1 | 354 | 99 | 452 | 0.0 | 728 |
| MS.gene91126.t1 | MTR_1g038920 | 97.740 | 354 | 5 | 1 | 1 | 354 | 99 | 449 | 0.0 | 716 |
| MS.gene91126.t1 | MTR_1g039010 | 87.288 | 354 | 42 | 1 | 1 | 354 | 96 | 446 | 0.0 | 647 |
| MS.gene91126.t1 | MTR_5g058430 | 56.627 | 332 | 141 | 1 | 1 | 332 | 13 | 341 | 4.73e-138 | 396 |
| MS.gene91126.t1 | MTR_0400s0010 | 98.305 | 177 | 3 | 0 | 141 | 317 | 1 | 177 | 1.15e-125 | 358 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91126.t1 | AT4G38220 | 74.576 | 354 | 82 | 2 | 1 | 354 | 88 | 433 | 0.0 | 546 |
| MS.gene91126.t1 | AT4G38220 | 73.729 | 354 | 82 | 3 | 1 | 354 | 88 | 430 | 0.0 | 535 |
| MS.gene91126.t1 | AT1G44180 | 57.895 | 342 | 141 | 1 | 1 | 342 | 95 | 433 | 5.34e-154 | 440 |
| MS.gene91126.t1 | AT1G44180 | 57.895 | 342 | 141 | 1 | 1 | 342 | 95 | 433 | 5.34e-154 | 440 |
| MS.gene91126.t1 | AT1G44180 | 57.895 | 342 | 141 | 1 | 1 | 342 | 95 | 433 | 5.34e-154 | 440 |
| MS.gene91126.t1 | AT1G44820 | 56.433 | 342 | 146 | 1 | 1 | 342 | 93 | 431 | 6.89e-150 | 430 |
Find 105 sgRNAs with CRISPR-Local
Find 255 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCTAAGAGGACTGTTTATT+TGG | 0.186701 | 1.3:+22156870 | MS.gene91126:CDS |
| GGCTGGTGATCAAGGCTGTT+GGG | 0.211188 | 1.3:+22157896 | MS.gene91126:CDS |
| GTTTCCGCAATATGTCTTTC+AGG | 0.243091 | 1.3:+22158671 | MS.gene91126:CDS |
| CTTCTCCGGATGAGCATTAC+AGG | 0.286955 | 1.3:+22157845 | MS.gene91126:CDS |
| TTTGGTGATGACTGGTTTCC+CGG | 0.303974 | 1.3:-22159338 | None:intergenic |
| ATCAAGGCTGTTGGGGCCCC+TGG | 0.313182 | 1.3:+22157904 | MS.gene91126:CDS |
| CGTGTTGGATTGCCTGCTAT+TGG | 0.355347 | 1.3:+22159475 | MS.gene91126:CDS |
| ACCAAATAAACAGTCCTCTT+AGG | 0.367447 | 1.3:-22156871 | None:intergenic |
| CTGTCTGTGCTTGATGCGTC+CGG | 0.371317 | 1.3:+22159319 | MS.gene91126:CDS |
| CTTGATCAAGGCCGGCTTGA+AGG | 0.382373 | 1.3:+22158017 | MS.gene91126:CDS |
| GGGATTGGAACTGTCAGTTT+TGG | 0.383485 | 1.3:-22159356 | None:intergenic |
| CTGTTAGGATTCTTAAAAGT+TGG | 0.386826 | 1.3:+22156839 | MS.gene91126:CDS |
| ACTAACAGGGCTGGCTTCTC+CGG | 0.389659 | 1.3:+22157831 | MS.gene91126:intron |
| TTTGCTCCTGATGAGGAGAT+TGG | 0.412203 | 1.3:+22156895 | MS.gene91126:CDS |
| CAAGTTTCCCACCAGCCTCT+TGG | 0.413037 | 1.3:-22159405 | None:intergenic |
| TGGCTGGTGATCAAGGCTGT+TGG | 0.415255 | 1.3:+22157895 | MS.gene91126:CDS |
| TGTTAGGATTCTTAAAAGTT+GGG | 0.416087 | 1.3:+22156840 | MS.gene91126:CDS |
| TAAAGCTTGGAGCCATGTCC+AGG | 0.418147 | 1.3:-22157922 | None:intergenic |
| GCTGTTGGGGCCCCTGGACA+TGG | 0.421601 | 1.3:+22157910 | MS.gene91126:CDS |
| CCCATGGTGGCTGGTGATCA+AGG | 0.428271 | 1.3:+22157888 | MS.gene91126:CDS |
| CAAGAGGCTGGTGGGAAACT+TGG | 0.430179 | 1.3:+22159406 | MS.gene91126:CDS |
| TGGAGTTCCAGCCTTCAAAA+AGG | 0.433167 | 1.3:-22158070 | None:intergenic |
| TGCAGTATCTTGAAGCTGTT+AGG | 0.436357 | 1.3:+22156824 | MS.gene91126:CDS |
| CAGCCATCTGAAGCAGAAGC+TGG | 0.440378 | 1.3:+22158574 | MS.gene91126:CDS |
| TTTCCGCAATATGTCTTTCA+GGG | 0.450321 | 1.3:+22158672 | MS.gene91126:CDS |
| TTGTGGTCATGGAGTAGAAT+AGG | 0.455956 | 1.3:-22159520 | None:intergenic |
| TAACAATCCCCACCAGGGAT+TGG | 0.458968 | 1.3:-22159371 | None:intergenic |
| GCTGGTGATCAAGGCTGTTG+GGG | 0.467340 | 1.3:+22157897 | MS.gene91126:CDS |
| AGCAGAGTTGTCATAAAGCT+TGG | 0.472153 | 1.3:-22157935 | None:intergenic |
| TGCTATTGGATTCTCACCTA+TGG | 0.472403 | 1.3:+22159489 | MS.gene91126:CDS |
| TGACCACCAATCTCCTCATC+AGG | 0.479072 | 1.3:-22156901 | None:intergenic |
| ACAAAGATGAATACTTGAAA+GGG | 0.479424 | 1.3:+22160490 | MS.gene91126:CDS |
| CAGTTTGACTTGATCAAGGC+CGG | 0.486990 | 1.3:+22158009 | MS.gene91126:CDS |
| AAATCACCTCATTGTGGTCA+TGG | 0.491849 | 1.3:-22159531 | None:intergenic |
| CTCACAGTTTGACTTGATCA+AGG | 0.494700 | 1.3:+22158005 | MS.gene91126:CDS |
| AATGCCCTGTAATGCTCATC+CGG | 0.497131 | 1.3:-22157850 | None:intergenic |
| CACAAAGATGAATACTTGAA+AGG | 0.501698 | 1.3:+22160489 | MS.gene91126:CDS |
| GAAAATGCTGTCCAAGAGGC+TGG | 0.508612 | 1.3:+22159394 | MS.gene91126:CDS |
| GATTTATGCAAGAGGGTCAC+AGG | 0.512669 | 1.3:+22156783 | MS.gene91126:CDS |
| GTGGGTCCATGATCCTTTCA+AGG | 0.516268 | 1.3:+22156738 | MS.gene91126:CDS |
| GAAACTAGGTGCCCACTCTT+CGG | 0.518474 | 1.3:-22158653 | None:intergenic |
| AAAGACATATTGCGGAAACT+AGG | 0.522661 | 1.3:-22158667 | None:intergenic |
| GCTTTATGACAACTCTGCTA+TGG | 0.522983 | 1.3:+22157939 | MS.gene91126:CDS |
| ACCCACTTATCATGTTCAGC+GGG | 0.533298 | 1.3:-22156721 | None:intergenic |
| TTCGATGAGCGTGTAAGAGA+TGG | 0.535915 | 1.3:+22160552 | MS.gene91126:CDS |
| ATCTCTTACACGCTCATCGA+AGG | 0.538291 | 1.3:-22160550 | None:intergenic |
| AATGATTCTGCATCAGCGGT+TGG | 0.539171 | 1.3:-22158616 | None:intergenic |
| CATGGGCCTTGAAAGGATCA+TGG | 0.539532 | 1.3:-22156744 | None:intergenic |
| TGGTGGGAAACTTGGTAAGC+CGG | 0.540180 | 1.3:+22159414 | MS.gene91126:CDS |
| GTTTGACTTACAGTTGGAGA+TGG | 0.540260 | 1.3:-22158090 | None:intergenic |
| AAGGCCCATGTGGATGATGA+AGG | 0.540460 | 1.3:+22156757 | MS.gene91126:CDS |
| AGAGAGGAGCCCATGGTGGC+TGG | 0.540557 | 1.3:+22157879 | MS.gene91126:CDS |
| GCTCCTGATGAGGAGATTGG+TGG | 0.541895 | 1.3:+22156898 | MS.gene91126:CDS |
| TGTCTGTGCTTGATGCGTCC+GGG | 0.541941 | 1.3:+22159320 | MS.gene91126:CDS |
| GGCCGGCTTGAAGGCTGAAG+GGG | 0.544594 | 1.3:+22158026 | MS.gene91126:CDS |
| GTGGAAGCAGGAAAGATCTC+CGG | 0.545776 | 1.3:-22159433 | None:intergenic |
| TCCCCGCTGAACATGATAAG+TGG | 0.545947 | 1.3:+22156719 | MS.gene91126:CDS |
| TAGCGTGCATCTGTGGAAGC+AGG | 0.546751 | 1.3:-22159445 | None:intergenic |
| GCACGCTATTTCCGCCGTGT+TGG | 0.549497 | 1.3:+22159460 | MS.gene91126:CDS |
| GAGGAGATTGGTGGTCATGA+TGG | 0.557016 | 1.3:+22156907 | MS.gene91126:CDS |
| TCATCCACATGGGCCTTGAA+AGG | 0.560463 | 1.3:-22156751 | None:intergenic |
| CCCATGTGGATGATGAAGGA+AGG | 0.560586 | 1.3:+22156761 | MS.gene91126:CDS |
| CTCTAATGATTCTGCATCAG+CGG | 0.561783 | 1.3:-22158620 | None:intergenic |
| GGATGTTGTTTCTATTAACA+TGG | 0.563003 | 1.3:+22158047 | MS.gene91126:CDS |
| TCCTTCCTTCATCATCCACA+TGG | 0.571894 | 1.3:-22156762 | None:intergenic |
| GCCTTGATCACCAGCCACCA+TGG | 0.573455 | 1.3:-22157889 | None:intergenic |
| CCTTGATCACCAGCCACCAT+GGG | 0.575073 | 1.3:-22157888 | None:intergenic |
| AATCCAGCTTCTGCTTCAGA+TGG | 0.575529 | 1.3:-22158577 | None:intergenic |
| AGGCCGGCTTGAAGGCTGAA+GGG | 0.576200 | 1.3:+22158025 | MS.gene91126:CDS |
| AAACTGACAGTTCCAATCCC+TGG | 0.578875 | 1.3:+22159359 | MS.gene91126:CDS |
| GCGGAAATAGCGTGCATCTG+TGG | 0.578906 | 1.3:-22159452 | None:intergenic |
| ATAGGTGAGAATCCAATAGC+AGG | 0.581430 | 1.3:-22159487 | None:intergenic |
| AGAATAGGAGTGTTTGCCAT+AGG | 0.586699 | 1.3:-22159505 | None:intergenic |
| AAGGCCGGCTTGAAGGCTGA+AGG | 0.594320 | 1.3:+22158024 | MS.gene91126:CDS |
| GACAGTTCCAATCCCTGGTG+GGG | 0.594707 | 1.3:+22159364 | MS.gene91126:CDS |
| TTACCCTGAAAGACATATTG+CGG | 0.595848 | 1.3:-22158675 | None:intergenic |
| ATCCCCTTCAGCCTTCAAGC+CGG | 0.595969 | 1.3:-22158028 | None:intergenic |
| GATTCTGCATCAGCGGTTGG+TGG | 0.596145 | 1.3:-22158613 | None:intergenic |
| AAAGCTTGGAGCCATGTCCA+GGG | 0.597262 | 1.3:-22157921 | None:intergenic |
| TGACAGTTCCAATCCCTGGT+GGG | 0.600989 | 1.3:+22159363 | MS.gene91126:CDS |
| CCCCGCTGAACATGATAAGT+GGG | 0.605177 | 1.3:+22156720 | MS.gene91126:CDS |
| GAGGCGAATTGCCGAAGAGT+GGG | 0.609461 | 1.3:+22158642 | MS.gene91126:CDS |
| ATGCTGTCCAAGAGGCTGGT+GGG | 0.609698 | 1.3:+22159398 | MS.gene91126:CDS |
| GTTGGTATAGTGCTTGATGA+AGG | 0.613803 | 1.3:+22156973 | MS.gene91126:CDS |
| AGAGTATTGAAAGCATTCGA+AGG | 0.618511 | 1.3:+22157974 | MS.gene91126:CDS |
| AATGCTGTCCAAGAGGCTGG+TGG | 0.620047 | 1.3:+22159397 | MS.gene91126:CDS |
| AGAGGCGAATTGCCGAAGAG+TGG | 0.624515 | 1.3:+22158641 | MS.gene91126:CDS |
| TCTATGCAGAGAGGAGCCCA+TGG | 0.627664 | 1.3:+22157872 | MS.gene91126:CDS |
| GTTAGAAAATGCTGTCCAAG+AGG | 0.638244 | 1.3:+22159390 | MS.gene91126:CDS |
| GACCCACTTATCATGTTCAG+CGG | 0.645614 | 1.3:-22156722 | None:intergenic |
| AAGGAAGGATTTATGCAAGA+GGG | 0.648002 | 1.3:+22156776 | MS.gene91126:CDS |
| CAATAGCAGGCAATCCAACA+CGG | 0.650903 | 1.3:-22159474 | None:intergenic |
| CCTTCCTTCATCATCCACAT+GGG | 0.670602 | 1.3:-22156761 | None:intergenic |
| AAGCTTGGAGCCATGTCCAG+GGG | 0.672594 | 1.3:-22157920 | None:intergenic |
| GAAGGAAGGATTTATGCAAG+AGG | 0.673198 | 1.3:+22156775 | MS.gene91126:CDS |
| CTGATGCAGAATCATTAGAG+AGG | 0.675563 | 1.3:+22158623 | MS.gene91126:CDS |
| TTCTCCGGATGAGCATTACA+GGG | 0.677025 | 1.3:+22157846 | MS.gene91126:CDS |
| TCTACTCCATGACCACAATG+AGG | 0.677316 | 1.3:+22159525 | MS.gene91126:CDS |
| TGATCCTTTCAAGGCCCATG+TGG | 0.688332 | 1.3:+22156747 | MS.gene91126:CDS |
| CTTGATCAAGTCAAACTGTG+AGG | 0.692029 | 1.3:-22158004 | None:intergenic |
| ATGCAGAGAGGAGCCCATGG+TGG | 0.703495 | 1.3:+22157875 | MS.gene91126:CDS |
| CTGACAGTTCCAATCCCTGG+TGG | 0.706841 | 1.3:+22159362 | MS.gene91126:CDS |
| ACAGGGCATTCTATGCAGAG+AGG | 0.731441 | 1.3:+22157863 | MS.gene91126:CDS |
| CCCACTTATCATGTTCAGCG+GGG | 0.753318 | 1.3:-22156720 | None:intergenic |
| TAGCAGGCAATCCAACACGG+CGG | 0.783188 | 1.3:-22159471 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAAAAAAAAAAAAAATT+AGG | - | chr1.3:22158848-22158867 | None:intergenic | 0.0% |
| !!! | TGACATTTTTTAAATTATTA+TGG | + | chr1.3:22159104-22159123 | MS.gene91126:intron | 10.0% |
| !! | ATGATAAATATAAAGCATAA+TGG | - | chr1.3:22158713-22158732 | None:intergenic | 15.0% |
| !!! | ATGAAAAAGTATTTATAAGA+GGG | - | chr1.3:22160077-22160096 | None:intergenic | 15.0% |
| !!! | TTTTTAAATTATTATGGAGA+AGG | + | chr1.3:22159110-22159129 | MS.gene91126:intron | 15.0% |
| !! | AAATTCTTAGAAAACTGATT+TGG | + | chr1.3:22157230-22157249 | MS.gene91126:intron | 20.0% |
| !! | ATGTTAAATAAATTTACCCT+TGG | + | chr1.3:22157591-22157610 | MS.gene91126:intron | 20.0% |
| !! | GAACACAATATTAATTAGAA+AGG | + | chr1.3:22157098-22157117 | MS.gene91126:intron | 20.0% |
| !! | TATTAGAACATTTCATATCA+TGG | + | chr1.3:22158883-22158902 | MS.gene91126:intron | 20.0% |
| !! | TCTTAATACTTCATAGAATT+TGG | + | chr1.3:22159803-22159822 | MS.gene91126:intron | 20.0% |
| !! | TTTGTAAGTGAATAAAGAAT+TGG | - | chr1.3:22157812-22157831 | None:intergenic | 20.0% |
| !!! | AATACTCTTTAATTTCTGTT+AGG | + | chr1.3:22157508-22157527 | MS.gene91126:intron | 20.0% |
| !!! | CATGAAAAAGTATTTATAAG+AGG | - | chr1.3:22160078-22160097 | None:intergenic | 20.0% |
| ! | AAAAAAACTTATCTCTGATG+TGG | - | chr1.3:22160195-22160214 | None:intergenic | 25.0% |
| ! | AAAGAACAGCAATTCATATT+TGG | - | chr1.3:22157651-22157670 | None:intergenic | 25.0% |
| ! | AACTCAAATATCTAAATCTG+TGG | - | chr1.3:22157207-22157226 | None:intergenic | 25.0% |
| ! | AAGAAAGATAGAATCATTAG+TGG | - | chr1.3:22158522-22158541 | None:intergenic | 25.0% |
| ! | AATGATAGAAATACTTCCTA+TGG | - | chr1.3:22158811-22158830 | None:intergenic | 25.0% |
| ! | ACAAAGATGAATACTTGAAA+GGG | + | chr1.3:22160490-22160509 | MS.gene91126:CDS | 25.0% |
| ! | ACTATGTCCTAGTTAATATA+AGG | + | chr1.3:22159669-22159688 | MS.gene91126:intron | 25.0% |
| ! | AGAAAGATAGAATCATTAGT+GGG | - | chr1.3:22158521-22158540 | None:intergenic | 25.0% |
| ! | ATACAACCAAAAAGAACATA+AGG | - | chr1.3:22160384-22160403 | None:intergenic | 25.0% |
| ! | ATAGAAAACAACTGAAAAAC+GGG | + | chr1.3:22158992-22159011 | MS.gene91126:intron | 25.0% |
| ! | ATGAAAATGTGTTCATAAGT+GGG | - | chr1.3:22159869-22159888 | None:intergenic | 25.0% |
| ! | ATGAAGGTAACAAAACAAAA+GGG | + | chr1.3:22156989-22157008 | MS.gene91126:intron | 25.0% |
| ! | ATGTGAAAAGGTTAATGTTA+TGG | + | chr1.3:22158939-22158958 | MS.gene91126:intron | 25.0% |
| ! | CATAGAAAACAACTGAAAAA+CGG | + | chr1.3:22158991-22159010 | MS.gene91126:intron | 25.0% |
| ! | GATATGTTTGATGAATTTGA+TGG | - | chr1.3:22158128-22158147 | None:intergenic | 25.0% |
| ! | GTAGTAGATAATGAAAATGA+TGG | + | chr1.3:22159139-22159158 | MS.gene91126:intron | 25.0% |
| ! | TAATCCAATTGTTGCATATT+CGG | + | chr1.3:22160136-22160155 | MS.gene91126:intron | 25.0% |
| ! | TATTAAGAAACATGTCAACA+TGG | - | chr1.3:22159791-22159810 | None:intergenic | 25.0% |
| ! | TATTCACTTACAAACTAACA+GGG | + | chr1.3:22157818-22157837 | MS.gene91126:intron | 25.0% |
| ! | TATTGTGTATTTACAAGACA+TGG | - | chr1.3:22158736-22158755 | None:intergenic | 25.0% |
| ! | TGTGAAATGTATCATTTCAA+AGG | - | chr1.3:22158448-22158467 | None:intergenic | 25.0% |
| ! | TGTTAGGATTCTTAAAAGTT+GGG | + | chr1.3:22156840-22156859 | MS.gene91126:CDS | 25.0% |
| ! | TTATTCACTTACAAACTAAC+AGG | + | chr1.3:22157817-22157836 | MS.gene91126:intron | 25.0% |
| ! | TTTCGATTATATTCTACTCA+TGG | - | chr1.3:22158335-22158354 | None:intergenic | 25.0% |
| !! | ATGAAAGCCTTATATTAACT+AGG | - | chr1.3:22159679-22159698 | None:intergenic | 25.0% |
| !! | TTCATCTTTTCTATGTGAAA+AGG | + | chr1.3:22158927-22158946 | MS.gene91126:intron | 25.0% |
| !!! | AAAAAGTATTTATAAGAGGG+AGG | - | chr1.3:22160074-22160093 | None:intergenic | 25.0% |
| !!! | AACCTGAATATTTTTTGTAC+AGG | - | chr1.3:22159746-22159765 | None:intergenic | 25.0% |
| !!! | ACCTGAATATTTTTTGTACA+GGG | - | chr1.3:22159745-22159764 | None:intergenic | 25.0% |
| !!! | ATAGGTTTTAGGTATTTGAA+AGG | + | chr1.3:22157253-22157272 | MS.gene91126:intron | 25.0% |
| !!! | GGTAATTTGTTCTCAAAAAA+AGG | - | chr1.3:22159246-22159265 | None:intergenic | 25.0% |
| !!! | TCCTCTAATATATTTTAGCT+CGG | + | chr1.3:22159280-22159299 | MS.gene91126:intron | 25.0% |
| AAAAATTGCAGAGAACATGA+AGG | - | chr1.3:22158909-22158928 | None:intergenic | 30.0% | |
| AACTAAATGCAAGTATAGTG+AGG | - | chr1.3:22160421-22160440 | None:intergenic | 30.0% | |
| AATCACATTTGTCTCAAGAA+AGG | - | chr1.3:22157481-22157500 | None:intergenic | 30.0% | |
| ACACAATAATCTCAGCTAAT+AGG | + | chr1.3:22158748-22158767 | MS.gene91126:intron | 30.0% | |
| ATCACCAAATTAGTGTGTTT+AGG | - | chr1.3:22157733-22157752 | None:intergenic | 30.0% | |
| CAAGTTAGATGTTAAACCAA+GGG | - | chr1.3:22157610-22157629 | None:intergenic | 30.0% | |
| CACAAAGATGAATACTTGAA+AGG | + | chr1.3:22160489-22160508 | MS.gene91126:CDS | 30.0% | |
| CAGAACATTGATATGATAAG+AGG | - | chr1.3:22158385-22158404 | None:intergenic | 30.0% | |
| CATGAAAATGTGTTCATAAG+TGG | - | chr1.3:22159870-22159889 | None:intergenic | 30.0% | |
| CTATAGAAATTTGTAGCCAT+AGG | + | chr1.3:22158792-22158811 | MS.gene91126:intron | 30.0% | |
| CTGTTAGGATTCTTAAAAGT+TGG | + | chr1.3:22156839-22156858 | MS.gene91126:CDS | 30.0% | |
| GAAAGATAGAATCATTAGTG+GGG | - | chr1.3:22158520-22158539 | None:intergenic | 30.0% | |
| GATGAAGGTAACAAAACAAA+AGG | + | chr1.3:22156988-22157007 | MS.gene91126:intron | 30.0% | |
| TAAGCATACTAGCATCAATT+AGG | - | chr1.3:22159574-22159593 | None:intergenic | 30.0% | |
| TAGAAAACAACTGAAAAACG+GGG | + | chr1.3:22158993-22159012 | MS.gene91126:intron | 30.0% | |
| TAGAGGAAGAATCTAATAAG+AGG | - | chr1.3:22159267-22159286 | None:intergenic | 30.0% | |
| TATCATTTCAAAGGTAAGCA+TGG | - | chr1.3:22158439-22158458 | None:intergenic | 30.0% | |
| TCAACATGGAAACAGAATAA+AGG | - | chr1.3:22159777-22159796 | None:intergenic | 30.0% | |
| TGATGAATTTGATGGAGTAT+TGG | - | chr1.3:22158120-22158139 | None:intergenic | 30.0% | |
| TGTTCTGTTATACATTTGAG+TGG | + | chr1.3:22158398-22158417 | MS.gene91126:intron | 30.0% | |
| TTACCACTCTACAAATATTG+CGG | + | chr1.3:22158249-22158268 | MS.gene91126:intron | 30.0% | |
| TTGTAAAAATCACCTCATTG+TGG | - | chr1.3:22159540-22159559 | None:intergenic | 30.0% | |
| TTTCAGTTATAGTCAAACCA+AGG | - | chr1.3:22157556-22157575 | None:intergenic | 30.0% | |
| ! | AATGTTATGGTTGATGCATT+TGG | + | chr1.3:22158952-22158971 | MS.gene91126:intron | 30.0% |
| ! | ACTTAAATTATAGTTCTGCG+CGG | + | chr1.3:22158162-22158181 | MS.gene91126:intron | 30.0% |
| ! | ATGTTATGGTTGATGCATTT+GGG | + | chr1.3:22158953-22158972 | MS.gene91126:intron | 30.0% |
| ! | CACTTATGAACACATTTTCA+TGG | + | chr1.3:22159868-22159887 | MS.gene91126:intron | 30.0% |
| ! | TATGCACCTTATGTTCTTTT+TGG | + | chr1.3:22160375-22160394 | MS.gene91126:intron | 30.0% |
| ! | TATTAACATGGCCTTTTTGA+AGG | + | chr1.3:22158059-22158078 | MS.gene91126:CDS | 30.0% |
| ! | TTTTACAGAACACAAAGTTG+AGG | - | chr1.3:22160275-22160294 | None:intergenic | 30.0% |
| !! | CTTAGAAAACTGATTTGGAT+AGG | + | chr1.3:22157235-22157254 | MS.gene91126:intron | 30.0% |
| !! | GGATGTTGTTTCTATTAACA+TGG | + | chr1.3:22158047-22158066 | MS.gene91126:CDS | 30.0% |
| !! | TTAGTTAGTCTCTTTTGCTA+TGG | + | chr1.3:22160161-22160180 | MS.gene91126:intron | 30.0% |
| !!! | AACTGATTTGGATAGGTTTT+AGG | + | chr1.3:22157242-22157261 | MS.gene91126:intron | 30.0% |
| !!! | ACAAGTGTTTGGTTTTACAT+TGG | + | chr1.3:22157438-22157457 | MS.gene91126:intron | 30.0% |
| !!! | CCTCTAATATATTTTAGCTC+GGG | + | chr1.3:22159281-22159300 | MS.gene91126:intron | 30.0% |
| AAAGACATATTGCGGAAACT+AGG | - | chr1.3:22158670-22158689 | None:intergenic | 35.0% | |
| AAAGCCGAATATGCAACAAT+TGG | - | chr1.3:22160143-22160162 | None:intergenic | 35.0% | |
| AAAGGTAAGCATGGCATTAT+TGG | - | chr1.3:22158430-22158449 | None:intergenic | 35.0% | |
| AAGGAAGGATTTATGCAAGA+GGG | + | chr1.3:22156776-22156795 | MS.gene91126:CDS | 35.0% | |
| AAGTCATGTCATTGTCTGTA+GGG | + | chr1.3:22159601-22159620 | MS.gene91126:intron | 35.0% | |
| AATTCCATCGCATTGCATTT+AGG | + | chr1.3:22158225-22158244 | MS.gene91126:intron | 35.0% | |
| ACCAAATAAACAGTCCTCTT+AGG | - | chr1.3:22156874-22156893 | None:intergenic | 35.0% | |
| ACCTTACAAATCAGTTTCGT+AGG | - | chr1.3:22159835-22159854 | None:intergenic | 35.0% | |
| ACTAATTGGATTGTCACGTA+AGG | - | chr1.3:22157173-22157192 | None:intergenic | 35.0% | |
| ACTCTTGTGATGCATGTTTA+TGG | - | chr1.3:22160235-22160254 | None:intergenic | 35.0% | |
| AGTTGCACAATTACAGTCAT+CGG | - | chr1.3:22159074-22159093 | None:intergenic | 35.0% | |
| ATTATTATGGAGAAGGCAAG+AGG | + | chr1.3:22159117-22159136 | MS.gene91126:intron | 35.0% | |
| ATTCCATCGCATTGCATTTA+GGG | + | chr1.3:22158226-22158245 | MS.gene91126:intron | 35.0% | |
| ATTGTGTAACCACAATGTTC+TGG | - | chr1.3:22160347-22160366 | None:intergenic | 35.0% | |
| CAAGTCAATGTTCCAAAGTT+AGG | - | chr1.3:22157762-22157781 | None:intergenic | 35.0% | |
| CCCGAGCTAAAATATATTAG+AGG | - | chr1.3:22159284-22159303 | None:intergenic | 35.0% | |
| CCTTACAAATCAGTTTCGTA+GGG | - | chr1.3:22159834-22159853 | None:intergenic | 35.0% | |
| CTCACCTAAACACACTAATT+TGG | + | chr1.3:22157726-22157745 | MS.gene91126:intron | 35.0% | |
| GCAAGTTAGATGTTAAACCA+AGG | - | chr1.3:22157611-22157630 | None:intergenic | 35.0% | |
| GCCCTGTACAAAAAATATTC+AGG | + | chr1.3:22159741-22159760 | MS.gene91126:intron | 35.0% | |
| GGTGATGATATACCTAACTT+TGG | + | chr1.3:22157747-22157766 | MS.gene91126:intron | 35.0% | |
| GTTATAGTCAAACCAAGGTT+TGG | - | chr1.3:22157551-22157570 | None:intergenic | 35.0% | |
| TAAGTCATGTCATTGTCTGT+AGG | + | chr1.3:22159600-22159619 | MS.gene91126:intron | 35.0% | |
| TTACCCTGAAAGACATATTG+CGG | - | chr1.3:22158678-22158697 | None:intergenic | 35.0% | |
| TTTCCGCAATATGTCTTTCA+GGG | + | chr1.3:22158672-22158691 | MS.gene91126:CDS | 35.0% | |
| ! | GCAGTAGATTTGTTTGAGTT+GGG | + | chr1.3:22160296-22160315 | MS.gene91126:intron | 35.0% |
| ! | TGAAAAGTTTTCGCTTTCGA+AGG | + | chr1.3:22156933-22156952 | MS.gene91126:CDS | 35.0% |
| ! | TGCAGTAGATTTGTTTGAGT+TGG | + | chr1.3:22160295-22160314 | MS.gene91126:intron | 35.0% |
| !! | AGAGTATTGAAAGCATTCGA+AGG | + | chr1.3:22157974-22157993 | MS.gene91126:CDS | 35.0% |
| !! | GATTTTCAGGACTTGAATGT+TGG | + | chr1.3:22156955-22156974 | MS.gene91126:CDS | 35.0% |
| !! | TTTTGAGAGAAAGCGATTGT+AGG | - | chr1.3:22159188-22159207 | None:intergenic | 35.0% |
| AAACACTTGTAGCACGCATT+TGG | - | chr1.3:22157428-22157447 | None:intergenic | 40.0% | |
| AAATCACCTCATTGTGGTCA+TGG | - | chr1.3:22159534-22159553 | None:intergenic | 40.0% | |
| AAATGCGTGCTACAAGTGTT+TGG | + | chr1.3:22157427-22157446 | MS.gene91126:intron | 40.0% | |
| ACAAATCAGTTTCGTAGGGT+TGG | - | chr1.3:22159830-22159849 | None:intergenic | 40.0% | |
| AGCAGAGTTGTCATAAAGCT+TGG | - | chr1.3:22157938-22157957 | None:intergenic | 40.0% | |
| AGTCAAACCAAGGTTTGGAA+CGG | - | chr1.3:22157546-22157565 | None:intergenic | 40.0% | |
| ATAGGTGAGAATCCAATAGC+AGG | - | chr1.3:22159490-22159509 | None:intergenic | 40.0% | |
| ATAGTGAGGTGCATGACATT+AGG | - | chr1.3:22160407-22160426 | None:intergenic | 40.0% | |
| ATGTTCAATCCTAGTCGTGA+AGG | - | chr1.3:22159933-22159952 | None:intergenic | 40.0% | |
| CAAATCAGTTTCGTAGGGTT+GGG | - | chr1.3:22159829-22159848 | None:intergenic | 40.0% | |
| CCAATTGTGTGCTAAACACA+TGG | - | chr1.3:22157345-22157364 | None:intergenic | 40.0% | |
| CCATGTGTTTAGCACACAAT+TGG | + | chr1.3:22157342-22157361 | MS.gene91126:intron | 40.0% | |
| CTAACTCTACTCCACAAAAC+CGG | + | chr1.3:22160030-22160049 | MS.gene91126:intron | 40.0% | |
| CTCTAATGATTCTGCATCAG+CGG | - | chr1.3:22158623-22158642 | None:intergenic | 40.0% | |
| CTGATGCAGAATCATTAGAG+AGG | + | chr1.3:22158623-22158642 | MS.gene91126:CDS | 40.0% | |
| CTTGATCAAGTCAAACTGTG+AGG | - | chr1.3:22158007-22158026 | None:intergenic | 40.0% | |
| GAAGGAAGGATTTATGCAAG+AGG | + | chr1.3:22156775-22156794 | MS.gene91126:CDS | 40.0% | |
| GCAAATTCATGACAAAACCC+TGG | - | chr1.3:22158555-22158574 | None:intergenic | 40.0% | |
| GCCTAAGAGGACTGTTTATT+TGG | + | chr1.3:22156870-22156889 | MS.gene91126:CDS | 40.0% | |
| GCTAATCAAAAGCTACGCTT+TGG | - | chr1.3:22157376-22157395 | None:intergenic | 40.0% | |
| GCTTTATGACAACTCTGCTA+TGG | + | chr1.3:22157939-22157958 | MS.gene91126:CDS | 40.0% | |
| GTTAGAAAATGCTGTCCAAG+AGG | + | chr1.3:22159390-22159409 | MS.gene91126:CDS | 40.0% | |
| GTTGGTATAGTGCTTGATGA+AGG | + | chr1.3:22156973-22156992 | MS.gene91126:CDS | 40.0% | |
| GTTTCCGCAATATGTCTTTC+AGG | + | chr1.3:22158671-22158690 | MS.gene91126:CDS | 40.0% | |
| TAACCCTAAATGCAATGCGA+TGG | - | chr1.3:22158232-22158251 | None:intergenic | 40.0% | |
| TGCAAGACTAACAGTGTGTT+TGG | + | chr1.3:22157298-22157317 | MS.gene91126:intron | 40.0% | |
| TGCAGTATCTTGAAGCTGTT+AGG | + | chr1.3:22156824-22156843 | MS.gene91126:CDS | 40.0% | |
| TGCTATTGGATTCTCACCTA+TGG | + | chr1.3:22159489-22159508 | MS.gene91126:CDS | 40.0% | |
| TGTTCAATCCTAGTCGTGAA+GGG | - | chr1.3:22159932-22159951 | None:intergenic | 40.0% | |
| TTGATTTCCGTTCCAAACCT+TGG | + | chr1.3:22157536-22157555 | MS.gene91126:intron | 40.0% | |
| TTGTGGTCATGGAGTAGAAT+AGG | - | chr1.3:22159523-22159542 | None:intergenic | 40.0% | |
| ! | ATGTTCTGGCACAACCTTTT+CGG | - | chr1.3:22160333-22160352 | None:intergenic | 40.0% |
| ! | ATTTTCTAACAATCCCCACC+AGG | - | chr1.3:22159380-22159399 | None:intergenic | 40.0% |
| ! | CTTTCTTTTGATGTGCACCA+GGG | + | chr1.3:22158535-22158554 | MS.gene91126:intron | 40.0% |
| ! | GTTTGACTTACAGTTGGAGA+TGG | - | chr1.3:22158093-22158112 | None:intergenic | 40.0% |
| ! | TCTTTCTTTTGATGTGCACC+AGG | + | chr1.3:22158534-22158553 | MS.gene91126:intron | 40.0% |
| ! | TTCGCTTTCGAAGGATTTTC+AGG | + | chr1.3:22156942-22156961 | MS.gene91126:CDS | 40.0% |
| ! | TTTTCTAACAATCCCCACCA+GGG | - | chr1.3:22159379-22159398 | None:intergenic | 40.0% |
| !! | AAAACCGGCTTGTATGGTAA+TGG | + | chr1.3:22160045-22160064 | MS.gene91126:intron | 40.0% |
| !! | AGAATAGGAGTGTTTGCCAT+AGG | - | chr1.3:22159508-22159527 | None:intergenic | 40.0% |
| !! | CCCTACGAAACTGATTTGTA+AGG | + | chr1.3:22159831-22159850 | MS.gene91126:intron | 40.0% |
| !! | CTCACAGTTTGACTTGATCA+AGG | + | chr1.3:22158005-22158024 | MS.gene91126:CDS | 40.0% |
| !! | TGAACATCTTGAGTTGAGTG+TGG | + | chr1.3:22159946-22159965 | MS.gene91126:intron | 40.0% |
| !!! | TTTGGTTTTTGCTCCTGATG+AGG | + | chr1.3:22156888-22156907 | MS.gene91126:CDS | 40.0% |
| AAACTGACAGTTCCAATCCC+TGG | + | chr1.3:22159359-22159378 | MS.gene91126:CDS | 45.0% | |
| AAGGTTGTGCCAGAACATTG+TGG | + | chr1.3:22160335-22160354 | MS.gene91126:intron | 45.0% | |
| AATCCAGCTTCTGCTTCAGA+TGG | - | chr1.3:22158580-22158599 | None:intergenic | 45.0% | |
| AATGATTCTGCATCAGCGGT+TGG | - | chr1.3:22158619-22158638 | None:intergenic | 45.0% | |
| AATGCCCTGTAATGCTCATC+CGG | - | chr1.3:22157853-22157872 | None:intergenic | 45.0% | |
| ACAACACAGTCTATCCCTGT+TGG | - | chr1.3:22159988-22160007 | None:intergenic | 45.0% | |
| ACCCACTTATCATGTTCAGC+GGG | - | chr1.3:22156724-22156743 | None:intergenic | 45.0% | |
| ATCTCTTACACGCTCATCGA+AGG | - | chr1.3:22160553-22160572 | None:intergenic | 45.0% | |
| CAACACAGTCTATCCCTGTT+GGG | - | chr1.3:22159987-22160006 | None:intergenic | 45.0% | |
| CAATAGCAGGCAATCCAACA+CGG | - | chr1.3:22159477-22159496 | None:intergenic | 45.0% | |
| CACTTACAAACTAACAGGGC+TGG | + | chr1.3:22157822-22157841 | MS.gene91126:intron | 45.0% | |
| CCTTCCTTCATCATCCACAT+GGG | - | chr1.3:22156764-22156783 | None:intergenic | 45.0% | |
| CGACCGCAATATTTGTAGAG+TGG | - | chr1.3:22158255-22158274 | None:intergenic | 45.0% | |
| GACCCACTTATCATGTTCAG+CGG | - | chr1.3:22156725-22156744 | None:intergenic | 45.0% | |
| GATTTATGCAAGAGGGTCAC+AGG | + | chr1.3:22156783-22156802 | MS.gene91126:CDS | 45.0% | |
| GCATCCATTACCATACAAGC+CGG | - | chr1.3:22160052-22160071 | None:intergenic | 45.0% | |
| GCTAAACACATGGTAGCACA+CGG | - | chr1.3:22157335-22157354 | None:intergenic | 45.0% | |
| GGGTTGTATCCTAACCGAAA+AGG | + | chr1.3:22160316-22160335 | MS.gene91126:intron | 45.0% | |
| TCCTTCCTTCATCATCCACA+TGG | - | chr1.3:22156765-22156784 | None:intergenic | 45.0% | |
| TCTACTCCATGACCACAATG+AGG | + | chr1.3:22159525-22159544 | MS.gene91126:CDS | 45.0% | |
| TGGAGTTCCAGCCTTCAAAA+AGG | - | chr1.3:22158073-22158092 | None:intergenic | 45.0% | |
| TGGCGACACACAGAACTAAT+TGG | - | chr1.3:22157187-22157206 | None:intergenic | 45.0% | |
| TTCGATGAGCGTGTAAGAGA+TGG | + | chr1.3:22160552-22160571 | MS.gene91126:CDS | 45.0% | |
| TTCTCCGGATGAGCATTACA+GGG | + | chr1.3:22157846-22157865 | MS.gene91126:CDS | 45.0% | |
| TTTGCTCCTGATGAGGAGAT+TGG | + | chr1.3:22156895-22156914 | MS.gene91126:CDS | 45.0% | |
| ! | GGAGTCGTTTGACTTACAGT+TGG | - | chr1.3:22158099-22158118 | None:intergenic | 45.0% |
| ! | GGGATTGGAACTGTCAGTTT+TGG | - | chr1.3:22159359-22159378 | None:intergenic | 45.0% |
| ! | GTACAGGGCTACACTGTTTT+AGG | - | chr1.3:22159730-22159749 | None:intergenic | 45.0% |
| ! | GTTGGGATTTTCAGCCTAAG+AGG | + | chr1.3:22156857-22156876 | MS.gene91126:CDS | 45.0% |
| ! | TGATTAGCTGCATAGTGCTG+CGG | + | chr1.3:22157388-22157407 | MS.gene91126:intron | 45.0% |
| !! | AACATGGCCTTTTTGAAGGC+TGG | + | chr1.3:22158063-22158082 | MS.gene91126:CDS | 45.0% |
| !! | CAGTTTGACTTGATCAAGGC+CGG | + | chr1.3:22158009-22158028 | MS.gene91126:CDS | 45.0% |
| !! | TACCATACAAGCCGGTTTTG+TGG | - | chr1.3:22160044-22160063 | None:intergenic | 45.0% |
| !! | TTTGGTGATGACTGGTTTCC+CGG | - | chr1.3:22159341-22159360 | None:intergenic | 45.0% |
| !!! | CTGTCAGTTTTGGTGATGAC+TGG | - | chr1.3:22159349-22159368 | None:intergenic | 45.0% |
| AAAGCTTGGAGCCATGTCCA+GGG | - | chr1.3:22157924-22157943 | None:intergenic | 50.0% | |
| AAGGCCCATGTGGATGATGA+AGG | + | chr1.3:22156757-22156776 | MS.gene91126:CDS | 50.0% | |
| CATGGGCCTTGAAAGGATCA+TGG | - | chr1.3:22156747-22156766 | None:intergenic | 50.0% | |
| CCCACTTATCATGTTCAGCG+GGG | - | chr1.3:22156723-22156742 | None:intergenic | 50.0% | |
| CCCATGTGGATGATGAAGGA+AGG | + | chr1.3:22156761-22156780 | MS.gene91126:CDS | 50.0% | |
| CCCCGCTGAACATGATAAGT+GGG | + | chr1.3:22156720-22156739 | MS.gene91126:CDS | 50.0% | |
| CGTGTTGGATTGCCTGCTAT+TGG | + | chr1.3:22159475-22159494 | MS.gene91126:CDS | 50.0% | |
| CTTCTCCGGATGAGCATTAC+AGG | + | chr1.3:22157845-22157864 | MS.gene91126:CDS | 50.0% | |
| GAAAATGCTGTCCAAGAGGC+TGG | + | chr1.3:22159394-22159413 | MS.gene91126:CDS | 50.0% | |
| GAAACTAGGTGCCCACTCTT+CGG | - | chr1.3:22158656-22158675 | None:intergenic | 50.0% | |
| GTGGAAGCAGGAAAGATCTC+CGG | - | chr1.3:22159436-22159455 | None:intergenic | 50.0% | |
| GTGGGTCCATGATCCTTTCA+AGG | + | chr1.3:22156738-22156757 | MS.gene91126:CDS | 50.0% | |
| TAAAGCTTGGAGCCATGTCC+AGG | - | chr1.3:22157925-22157944 | None:intergenic | 50.0% | |
| TAACAATCCCCACCAGGGAT+TGG | - | chr1.3:22159374-22159393 | None:intergenic | 50.0% | |
| TAGCAACAGATGGCCCAACA+GGG | + | chr1.3:22159971-22159990 | MS.gene91126:intron | 50.0% | |
| TCATCCACATGGGCCTTGAA+AGG | - | chr1.3:22156754-22156773 | None:intergenic | 50.0% | |
| TCCCCGCTGAACATGATAAG+TGG | + | chr1.3:22156719-22156738 | MS.gene91126:CDS | 50.0% | |
| TGACAGTTCCAATCCCTGGT+GGG | + | chr1.3:22159363-22159382 | MS.gene91126:CDS | 50.0% | |
| TGACCACCAATCTCCTCATC+AGG | - | chr1.3:22156904-22156923 | None:intergenic | 50.0% | |
| TGATCCTTTCAAGGCCCATG+TGG | + | chr1.3:22156747-22156766 | MS.gene91126:CDS | 50.0% | |
| TGGTGGGAAACTTGGTAAGC+CGG | + | chr1.3:22159414-22159433 | MS.gene91126:CDS | 50.0% | |
| ! | ACAGGGCATTCTATGCAGAG+AGG | + | chr1.3:22157863-22157882 | MS.gene91126:CDS | 50.0% |
| ! | CTGGCACAACCTTTTCGGTT+AGG | - | chr1.3:22160328-22160347 | None:intergenic | 50.0% |
| ! | GAGGAGATTGGTGGTCATGA+TGG | + | chr1.3:22156907-22156926 | MS.gene91126:CDS | 50.0% |
| !! | CTCCACAAAACCGGCTTGTA+TGG | + | chr1.3:22160039-22160058 | MS.gene91126:intron | 50.0% |
| AAGCTTGGAGCCATGTCCAG+GGG | - | chr1.3:22157923-22157942 | None:intergenic | 55.0% | |
| AATGCTGTCCAAGAGGCTGG+TGG | + | chr1.3:22159397-22159416 | MS.gene91126:CDS | 55.0% | |
| AGAGGCGAATTGCCGAAGAG+TGG | + | chr1.3:22158641-22158660 | MS.gene91126:CDS | 55.0% | |
| ATCCCCTTCAGCCTTCAAGC+CGG | - | chr1.3:22158031-22158050 | None:intergenic | 55.0% | |
| ATGCTGTCCAAGAGGCTGGT+GGG | + | chr1.3:22159398-22159417 | MS.gene91126:CDS | 55.0% | |
| CAAGAGGCTGGTGGGAAACT+TGG | + | chr1.3:22159406-22159425 | MS.gene91126:CDS | 55.0% | |
| CAAGTTTCCCACCAGCCTCT+TGG | - | chr1.3:22159408-22159427 | None:intergenic | 55.0% | |
| CACACACACCCTTCACGACT+AGG | + | chr1.3:22159921-22159940 | MS.gene91126:intron | 55.0% | |
| CCTTGATCACCAGCCACCAT+GGG | - | chr1.3:22157891-22157910 | None:intergenic | 55.0% | |
| CTAGCAACAGATGGCCCAAC+AGG | + | chr1.3:22159970-22159989 | MS.gene91126:intron | 55.0% | |
| CTGACAGTTCCAATCCCTGG+TGG | + | chr1.3:22159362-22159381 | MS.gene91126:CDS | 55.0% | |
| CTGTCTGTGCTTGATGCGTC+CGG | + | chr1.3:22159319-22159338 | MS.gene91126:CDS | 55.0% | |
| CTGTTGGGCCATCTGTTGCT+AGG | - | chr1.3:22159972-22159991 | None:intergenic | 55.0% | |
| GACAGTTCCAATCCCTGGTG+GGG | + | chr1.3:22159364-22159383 | MS.gene91126:CDS | 55.0% | |
| GAGGCGAATTGCCGAAGAGT+GGG | + | chr1.3:22158642-22158661 | MS.gene91126:CDS | 55.0% | |
| GAGTGTGGCCTAGCAACAGA+TGG | + | chr1.3:22159961-22159980 | MS.gene91126:intron | 55.0% | |
| GATTCTGCATCAGCGGTTGG+TGG | - | chr1.3:22158616-22158635 | None:intergenic | 55.0% | |
| GCGGAAATAGCGTGCATCTG+TGG | - | chr1.3:22159455-22159474 | None:intergenic | 55.0% | |
| GCTCCTGATGAGGAGATTGG+TGG | + | chr1.3:22156898-22156917 | MS.gene91126:CDS | 55.0% | |
| GCTGGTGATCAAGGCTGTTG+GGG | + | chr1.3:22157897-22157916 | MS.gene91126:CDS | 55.0% | |
| GGCTGGTGATCAAGGCTGTT+GGG | + | chr1.3:22157896-22157915 | MS.gene91126:CDS | 55.0% | |
| TAGCAGGCAATCCAACACGG+CGG | - | chr1.3:22159474-22159493 | None:intergenic | 55.0% | |
| TAGCGTGCATCTGTGGAAGC+AGG | - | chr1.3:22159448-22159467 | None:intergenic | 55.0% | |
| TCTATGCAGAGAGGAGCCCA+TGG | + | chr1.3:22157872-22157891 | MS.gene91126:CDS | 55.0% | |
| TGGCTGGTGATCAAGGCTGT+TGG | + | chr1.3:22157895-22157914 | MS.gene91126:CDS | 55.0% | |
| TGTCTGTGCTTGATGCGTCC+GGG | + | chr1.3:22159320-22159339 | MS.gene91126:CDS | 55.0% | |
| ! | CAGCCATCTGAAGCAGAAGC+TGG | + | chr1.3:22158574-22158593 | MS.gene91126:CDS | 55.0% |
| !! | ACTAACAGGGCTGGCTTCTC+CGG | + | chr1.3:22157831-22157850 | MS.gene91126:intron | 55.0% |
| !! | CTTGATCAAGGCCGGCTTGA+AGG | + | chr1.3:22158017-22158036 | MS.gene91126:CDS | 55.0% |
| ATGCAGAGAGGAGCCCATGG+TGG | + | chr1.3:22157875-22157894 | MS.gene91126:CDS | 60.0% | |
| CCCATGGTGGCTGGTGATCA+AGG | + | chr1.3:22157888-22157907 | MS.gene91126:CDS | 60.0% | |
| GCCTTGATCACCAGCCACCA+TGG | - | chr1.3:22157892-22157911 | None:intergenic | 60.0% | |
| ! | GCACGCTATTTCCGCCGTGT+TGG | + | chr1.3:22159460-22159479 | MS.gene91126:CDS | 60.0% |
| !! | AAGGCCGGCTTGAAGGCTGA+AGG | + | chr1.3:22158024-22158043 | MS.gene91126:CDS | 60.0% |
| !! | AGGCCGGCTTGAAGGCTGAA+GGG | + | chr1.3:22158025-22158044 | MS.gene91126:CDS | 60.0% |
| AGAGAGGAGCCCATGGTGGC+TGG | + | chr1.3:22157879-22157898 | MS.gene91126:CDS | 65.0% | |
| ATCAAGGCTGTTGGGGCCCC+TGG | + | chr1.3:22157904-22157923 | MS.gene91126:CDS | 65.0% | |
| !! | GGCCGGCTTGAAGGCTGAAG+GGG | + | chr1.3:22158026-22158045 | MS.gene91126:CDS | 65.0% |
| GCTGTTGGGGCCCCTGGACA+TGG | + | chr1.3:22157910-22157929 | MS.gene91126:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 22156694 | 22160596 | 22156694 | ID=MS.gene91126 |
| chr1.3 | mRNA | 22156694 | 22160596 | 22156694 | ID=MS.gene91126.t1;Parent=MS.gene91126 |
| chr1.3 | exon | 22156694 | 22156994 | 22156694 | ID=MS.gene91126.t1.exon1;Parent=MS.gene91126.t1 |
| chr1.3 | CDS | 22156694 | 22156994 | 22156694 | ID=cds.MS.gene91126.t1;Parent=MS.gene91126.t1 |
| chr1.3 | exon | 22157839 | 22158101 | 22157839 | ID=MS.gene91126.t1.exon2;Parent=MS.gene91126.t1 |
| chr1.3 | CDS | 22157839 | 22158101 | 22157839 | ID=cds.MS.gene91126.t1;Parent=MS.gene91126.t1 |
| chr1.3 | exon | 22158556 | 22158693 | 22158556 | ID=MS.gene91126.t1.exon3;Parent=MS.gene91126.t1 |
| chr1.3 | CDS | 22158556 | 22158693 | 22158556 | ID=cds.MS.gene91126.t1;Parent=MS.gene91126.t1 |
| chr1.3 | exon | 22159298 | 22159546 | 22159298 | ID=MS.gene91126.t1.exon4;Parent=MS.gene91126.t1 |
| chr1.3 | CDS | 22159298 | 22159546 | 22159298 | ID=cds.MS.gene91126.t1;Parent=MS.gene91126.t1 |
| chr1.3 | exon | 22160483 | 22160596 | 22160483 | ID=MS.gene91126.t1.exon5;Parent=MS.gene91126.t1 |
| chr1.3 | CDS | 22160483 | 22160596 | 22160483 | ID=cds.MS.gene91126.t1;Parent=MS.gene91126.t1 |
| Gene Sequence |
| Protein sequence |
