Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91408.t1 | XP_013457334.1 | 100 | 130 | 0 | 0 | 1 | 130 | 1 | 130 | 6.30E-68 | 266.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91408.t1 | P42798 | 98.5 | 130 | 2 | 0 | 1 | 130 | 1 | 130 | 5.8e-70 | 264.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91408.t1 | I3SJY8 | 100.0 | 130 | 0 | 0 | 1 | 130 | 1 | 130 | 4.5e-68 | 266.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050916 | MS.gene91408 | 0.8181 | 2.34E-52 | -1.69E-46 |
| MS.gene056075 | MS.gene91408 | 0.823949 | 1.05E-53 | -1.69E-46 |
| MS.gene056917 | MS.gene91408 | 0.822214 | 2.67E-53 | -1.69E-46 |
| MS.gene058354 | MS.gene91408 | 0.810871 | 9.29E-51 | -1.69E-46 |
| MS.gene06001 | MS.gene91408 | 0.812374 | 4.38E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91408.t1 | MTR_4g094598 | 100.000 | 130 | 0 | 0 | 1 | 130 | 1 | 130 | 5.74e-94 | 267 |
| MS.gene91408.t1 | MTR_1g105415 | 100.000 | 130 | 0 | 0 | 1 | 130 | 1 | 130 | 5.74e-94 | 267 |
| MS.gene91408.t1 | MTR_4g117470 | 99.231 | 130 | 1 | 0 | 1 | 130 | 1 | 130 | 2.82e-93 | 265 |
| MS.gene91408.t1 | MTR_8g101910 | 52.000 | 125 | 60 | 0 | 6 | 130 | 5 | 129 | 9.74e-46 | 145 |
| MS.gene91408.t1 | MTR_8g101910 | 49.474 | 95 | 48 | 0 | 6 | 100 | 5 | 99 | 9.43e-29 | 101 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91408.t1 | AT5G59850 | 98.462 | 130 | 2 | 0 | 1 | 130 | 1 | 130 | 4.89e-93 | 265 |
| MS.gene91408.t1 | AT1G07770 | 98.462 | 130 | 2 | 0 | 1 | 130 | 1 | 130 | 4.89e-93 | 265 |
| MS.gene91408.t1 | AT1G07770 | 98.462 | 130 | 2 | 0 | 1 | 130 | 1 | 130 | 4.89e-93 | 265 |
| MS.gene91408.t1 | AT1G07770 | 98.462 | 130 | 2 | 0 | 1 | 130 | 1 | 130 | 4.89e-93 | 265 |
| MS.gene91408.t1 | AT3G46040 | 96.923 | 130 | 4 | 0 | 1 | 130 | 1 | 130 | 1.11e-91 | 261 |
| MS.gene91408.t1 | AT2G39590 | 91.538 | 130 | 11 | 0 | 1 | 130 | 1 | 130 | 4.60e-87 | 249 |
| MS.gene91408.t1 | AT4G29430 | 54.400 | 125 | 57 | 0 | 6 | 130 | 5 | 129 | 1.51e-47 | 149 |
| MS.gene91408.t1 | AT2G19720 | 53.600 | 125 | 58 | 0 | 6 | 130 | 5 | 129 | 1.71e-45 | 144 |
Find 26 sgRNAs with CRISPR-Local
Find 115 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTGATTATCAAATTCCTTA+TGG | 0.311584 | 1.3:-71854578 | MS.gene91408:CDS |
| TTGTGTTTGTAGGATACATT+GGG | 0.378729 | 1.3:-71854435 | MS.gene91408:intron |
| GACTACCTCTGCTGGTATCA+TGG | 0.414748 | 1.3:-71853095 | MS.gene91408:CDS |
| ACCACCAACATTCTTTCTCC+TGG | 0.414976 | 1.3:+71853060 | None:intergenic |
| GAAAGCGTCAAGTTATGATT+AGG | 0.452540 | 1.3:-71854612 | MS.gene91408:CDS |
| TTTGTGTTTGTAGGATACAT+TGG | 0.464282 | 1.3:-71854436 | MS.gene91408:intron |
| AATGTTGGTGGTAAAGTGTT+GGG | 0.506719 | 1.3:-71853049 | MS.gene91408:CDS |
| TTGAATATGTCGATGATCAC+AGG | 0.509301 | 1.3:-71854408 | MS.gene91408:CDS |
| AAAATTGTCGTCGAATTGAA+TGG | 0.519692 | 1.3:-71854379 | MS.gene91408:CDS |
| AGATTGAAGGATGGACTGCT+AGG | 0.524175 | 1.3:-71854303 | MS.gene91408:CDS |
| ATTGTCTTGACTACCTCTGC+TGG | 0.534592 | 1.3:-71853103 | MS.gene91408:CDS |
| GAATGTTGGTGGTAAAGTGT+TGG | 0.537027 | 1.3:-71853050 | MS.gene91408:CDS |
| TATGTCGATGATCACAGGTC+TGG | 0.547616 | 1.3:-71854403 | MS.gene91408:CDS |
| TCATGGATCATGAAGAGGCC+AGG | 0.549802 | 1.3:-71853078 | MS.gene91408:CDS |
| TAGGCTTCTTCCCTCAAGAC+AGG | 0.576488 | 1.3:-71854284 | MS.gene91408:intron |
| GCCAGGAGAAAGAATGTTGG+TGG | 0.584787 | 1.3:-71853061 | MS.gene91408:CDS |
| GTTGGTGTCAAAGAGATTGA+AGG | 0.610557 | 1.3:-71854316 | MS.gene91408:CDS |
| CTTATGGTCATGCAAAAGCA+TGG | 0.625786 | 1.3:-71854562 | MS.gene91408:intron |
| ATGATCCATGATACCAGCAG+AGG | 0.644078 | 1.3:+71853090 | None:intergenic |
| TGTGTTTGTAGGATACATTG+GGG | 0.648921 | 1.3:-71854434 | MS.gene91408:intron |
| TGGTATCATGGATCATGAAG+AGG | 0.653772 | 1.3:-71853083 | MS.gene91408:CDS |
| GAGGCCAGGAGAAAGAATGT+TGG | 0.655684 | 1.3:-71853064 | MS.gene91408:CDS |
| AATGGTAGATTGAACAAGTG+TGG | 0.659687 | 1.3:-71854361 | MS.gene91408:CDS |
| GTGTCAAAGAGATTGAAGGA+TGG | 0.661917 | 1.3:-71854312 | MS.gene91408:CDS |
| ATGTACAATGCTGAGAAACG+TGG | 0.686253 | 1.3:-71854634 | MS.gene91408:CDS |
| TTGACACCAACATCAAAACG+AGG | 0.729538 | 1.3:+71854328 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATGAAAATATTAAAAGAT+GGG | + | chr1.3:71854381-71854400 | None:intergenic | 10.0% |
| !! | TAAATGAAAATATTAAAAGA+TGG | + | chr1.3:71854382-71854401 | None:intergenic | 10.0% |
| !! | CTATAAAACAAACTTAAATA+AGG | + | chr1.3:71853776-71853795 | None:intergenic | 15.0% |
| !! | TAAACATTACAATTGAATAA+TGG | + | chr1.3:71854433-71854452 | None:intergenic | 15.0% |
| !! | AAAATATTAAAAGATGGGAT+AGG | + | chr1.3:71854376-71854395 | None:intergenic | 20.0% |
| !! | ATTAGAAATGATTCATGATT+AGG | + | chr1.3:71854149-71854168 | None:intergenic | 20.0% |
| !! | ATTTATTGTTTGATTCATGT+AGG | - | chr1.3:71853189-71853208 | MS.gene91408:intron | 20.0% |
| !! | CAAATTTATAAGACAAAACT+CGG | + | chr1.3:71853463-71853482 | None:intergenic | 20.0% |
| !! | TCAAATAAGTTAATCCAAAT+AGG | + | chr1.3:71853567-71853586 | None:intergenic | 20.0% |
| !! | TGTAATGTTTATATACTTGT+CGG | - | chr1.3:71854442-71854461 | MS.gene91408:intron | 20.0% |
| !!! | CTTTCTAATTTATTTGCTTT+TGG | - | chr1.3:71853920-71853939 | MS.gene91408:intron | 20.0% |
| !!! | TCAAACTACTAACATTTTTA+TGG | + | chr1.3:71853496-71853515 | None:intergenic | 20.0% |
| !!! | TGATAGTTTAATTTACATGA+TGG | - | chr1.3:71853513-71853532 | MS.gene91408:intron | 20.0% |
| ! | AATTGAATAATGGTTGCAAA+AGG | + | chr1.3:71854423-71854442 | None:intergenic | 25.0% |
| ! | AGTGATTATCAAATTCCTTA+TGG | - | chr1.3:71853131-71853150 | MS.gene91408:intron | 25.0% |
| ! | ATAGATGATAGTCAAATAGT+CGG | + | chr1.3:71854239-71854258 | None:intergenic | 25.0% |
| ! | CCATTAAAGCATAATAAGAA+GGG | + | chr1.3:71854270-71854289 | None:intergenic | 25.0% |
| ! | CCTTCTTATTATGCTTTAAT+GGG | - | chr1.3:71854268-71854287 | MS.gene91408:intron | 25.0% |
| ! | CTGACTTATACTTCATATAT+TGG | - | chr1.3:71854055-71854074 | MS.gene91408:intron | 25.0% |
| ! | CTTCTTATTATGCTTTAATG+GGG | - | chr1.3:71854269-71854288 | MS.gene91408:intron | 25.0% |
| ! | TAAATTCAAACCGTTCTTTA+TGG | - | chr1.3:71854178-71854197 | MS.gene91408:intron | 25.0% |
| ! | TGTTCTATTTCCACATAATA+AGG | + | chr1.3:71853891-71853910 | None:intergenic | 25.0% |
| ! | TTGTTTGTTTCCTTATTATG+TGG | - | chr1.3:71853878-71853897 | MS.gene91408:intron | 25.0% |
| !! | TTAGTAGGCTTTTAAATCTT+GGG | - | chr1.3:71853995-71854014 | MS.gene91408:intron | 25.0% |
| !! | TTGTATACTTTTGTGTTTGT+AGG | - | chr1.3:71853264-71853283 | MS.gene91408:intron | 25.0% |
| !!! | CTAATAGGCTTTTAAAACTT+GGG | - | chr1.3:71853968-71853987 | MS.gene91408:intron | 25.0% |
| !!! | GAATTTGATAATCACTTTTG+AGG | + | chr1.3:71853127-71853146 | None:intergenic | 25.0% |
| AAAAAAAGCTGACAAAAGCT+TGG | + | chr1.3:71853658-71853677 | None:intergenic | 30.0% | |
| AAAAAAGCTGACAAAAGCTT+GGG | + | chr1.3:71853657-71853676 | None:intergenic | 30.0% | |
| AAAATTGTCGTCGAATTGAA+TGG | - | chr1.3:71853330-71853349 | MS.gene91408:intron | 30.0% | |
| ACCTTTATATTAGGCCTAAT+AGG | - | chr1.3:71853953-71853972 | MS.gene91408:intron | 30.0% | |
| AGAACTTATGAAATCAGCTA+TGG | - | chr1.3:71853624-71853643 | MS.gene91408:intron | 30.0% | |
| CCCATTAAAGCATAATAAGA+AGG | + | chr1.3:71854271-71854290 | None:intergenic | 30.0% | |
| CCCTTCTTATTATGCTTTAA+TGG | - | chr1.3:71854267-71854286 | MS.gene91408:intron | 30.0% | |
| GTTTCATTTGATCTTTCTTG+TGG | - | chr1.3:71854547-71854566 | MS.gene91408:intron | 30.0% | |
| TCCTGGAATACCTTTATATT+AGG | - | chr1.3:71853944-71853963 | MS.gene91408:intron | 30.0% | |
| TGTTTGATTCATGTAGGATT+AGG | - | chr1.3:71853195-71853214 | MS.gene91408:intron | 30.0% | |
| TTGCTAAAATCATGCAGTTT+GGG | - | chr1.3:71854580-71854599 | MS.gene91408:CDS | 30.0% | |
| TTGTGTTTGTAGGATACATT+GGG | - | chr1.3:71853274-71853293 | MS.gene91408:intron | 30.0% | |
| TTTGTGTTTGTAGGATACAT+TGG | - | chr1.3:71853273-71853292 | MS.gene91408:intron | 30.0% | |
| ! | ATCCATTGACATAAGTTTTG+TGG | - | chr1.3:71853591-71853610 | MS.gene91408:intron | 30.0% |
| ! | GTTAGTAGGCTTTTAAATCT+TGG | - | chr1.3:71853994-71854013 | MS.gene91408:intron | 30.0% |
| !! | CATGATTTTAGCAACAGTTA+GGG | + | chr1.3:71854574-71854593 | None:intergenic | 30.0% |
| !! | TCCATTGACATAAGTTTTGT+GGG | - | chr1.3:71853592-71853611 | MS.gene91408:intron | 30.0% |
| !! | TTGATAATCACTTTTGAGGA+TGG | + | chr1.3:71853123-71853142 | None:intergenic | 30.0% |
| !! | TTTAAATCTTGGGTTGGAAT+TGG | - | chr1.3:71854005-71854024 | MS.gene91408:intron | 30.0% |
| !!! | ATTTATTTGCTTTTGGTTCC+TGG | - | chr1.3:71853927-71853946 | MS.gene91408:intron | 30.0% |
| !!! | CCAAGTTTTAAAAGCCTATT+AGG | + | chr1.3:71853970-71853989 | None:intergenic | 30.0% |
| !!! | CCTAATAGGCTTTTAAAACT+TGG | - | chr1.3:71853967-71853986 | MS.gene91408:intron | 30.0% |
| AATGGTAGATTGAACAAGTG+TGG | - | chr1.3:71853348-71853367 | MS.gene91408:intron | 35.0% | |
| ACAAGCAACATAACATTCGA+TGG | + | chr1.3:71854525-71854544 | None:intergenic | 35.0% | |
| ATACACCCAACCATAAAGAA+CGG | + | chr1.3:71854191-71854210 | None:intergenic | 35.0% | |
| CAGATGTTTCACTCACTTAA+GGG | - | chr1.3:71854102-71854121 | MS.gene91408:intron | 35.0% | |
| CTTAAGTGAGTGAAACATCT+GGG | + | chr1.3:71854103-71854122 | None:intergenic | 35.0% | |
| CTTATTATGCTTTAATGGGG+TGG | - | chr1.3:71854272-71854291 | MS.gene91408:intron | 35.0% | |
| GCCTATTAGGCCTAATATAA+AGG | + | chr1.3:71853957-71853976 | None:intergenic | 35.0% | |
| GTTGCTAAAATCATGCAGTT+TGG | - | chr1.3:71854579-71854598 | MS.gene91408:CDS | 35.0% | |
| TATAGTTCCTAACTATCGAG+TGG | - | chr1.3:71853791-71853810 | MS.gene91408:intron | 35.0% | |
| TCAAACCGTTCTTTATGGTT+GGG | - | chr1.3:71854183-71854202 | MS.gene91408:intron | 35.0% | |
| TCCCACAAAACTTATGTCAA+TGG | + | chr1.3:71853596-71853615 | None:intergenic | 35.0% | |
| TGTGTTTGTAGGATACATTG+GGG | - | chr1.3:71853275-71853294 | MS.gene91408:intron | 35.0% | |
| TTCAAACCGTTCTTTATGGT+TGG | - | chr1.3:71854182-71854201 | MS.gene91408:intron | 35.0% | |
| TTGAATATGTCGATGATCAC+AGG | - | chr1.3:71853301-71853320 | MS.gene91408:intron | 35.0% | |
| ! | TAGGCTTTTAAATCTTGGGT+TGG | - | chr1.3:71853999-71854018 | MS.gene91408:intron | 35.0% |
| !! | AATGTTGGTGGTAAAGTGTT+GGG | - | chr1.3:71854660-71854679 | MS.gene91408:CDS | 35.0% |
| !! | ATAAGTTTTGTGGGACTGTT+TGG | - | chr1.3:71853601-71853620 | MS.gene91408:intron | 35.0% |
| !! | ATTAGTCCTCGTTTTGATGT+TGG | - | chr1.3:71853375-71853394 | MS.gene91408:intron | 35.0% |
| !! | GAAAGCGTCAAGTTATGATT+AGG | - | chr1.3:71853097-71853116 | MS.gene91408:CDS | 35.0% |
| !! | GCATGATTTTAGCAACAGTT+AGG | + | chr1.3:71854575-71854594 | None:intergenic | 35.0% |
| !! | GCCTAATATAAAGGTATTCC+AGG | + | chr1.3:71853948-71853967 | None:intergenic | 35.0% |
| !! | TAAAACTTGGGTTGGTTAGT+AGG | - | chr1.3:71853980-71853999 | MS.gene91408:intron | 35.0% |
| !!! | TAGGCTTTTAAAACTTGGGT+TGG | - | chr1.3:71853972-71853991 | MS.gene91408:intron | 35.0% |
| AATAGTCGGTATGCATAGAG+TGG | + | chr1.3:71854225-71854244 | None:intergenic | 40.0% | |
| AGAATGACCACTCGATAGTT+AGG | + | chr1.3:71853801-71853820 | None:intergenic | 40.0% | |
| ATAGTCGGTATGCATAGAGT+GGG | + | chr1.3:71854224-71854243 | None:intergenic | 40.0% | |
| ATGATATGTGCTTCTGCTAC+AGG | - | chr1.3:71853750-71853769 | MS.gene91408:intron | 40.0% | |
| ATGTACAATGCTGAGAAACG+TGG | - | chr1.3:71853075-71853094 | MS.gene91408:CDS | 40.0% | |
| CACTCACTTAAGGGACTATT+TGG | - | chr1.3:71854111-71854130 | MS.gene91408:intron | 40.0% | |
| CCAGATGTTTCACTCACTTA+AGG | - | chr1.3:71854101-71854120 | MS.gene91408:intron | 40.0% | |
| CCTTAAGTGAGTGAAACATC+TGG | + | chr1.3:71854104-71854123 | None:intergenic | 40.0% | |
| CTGAAGTTGCTATCATCATC+TGG | - | chr1.3:71854495-71854514 | MS.gene91408:intron | 40.0% | |
| CTTATGGTCATGCAAAAGCA+TGG | - | chr1.3:71853147-71853166 | MS.gene91408:intron | 40.0% | |
| GGTGGACGTAGAATATTCAT+TGG | - | chr1.3:71854290-71854309 | MS.gene91408:CDS | 40.0% | |
| GTGTCAAAGAGATTGAAGGA+TGG | - | chr1.3:71853397-71853416 | MS.gene91408:intron | 40.0% | |
| TGGTATCATGGATCATGAAG+AGG | - | chr1.3:71854626-71854645 | MS.gene91408:CDS | 40.0% | |
| TTGACACCAACATCAAAACG+AGG | + | chr1.3:71853384-71853403 | None:intergenic | 40.0% | |
| ! | CATGCTTTTGCATGACCATA+AGG | + | chr1.3:71853149-71853168 | None:intergenic | 40.0% |
| ! | TCATGCAAAAGCATGGTATG+TGG | - | chr1.3:71853154-71853173 | MS.gene91408:intron | 40.0% |
| !! | GAATGTTGGTGGTAAAGTGT+TGG | - | chr1.3:71854659-71854678 | MS.gene91408:CDS | 40.0% |
| !! | GTAGGATTAGGCTTTGTTAC+TGG | - | chr1.3:71853207-71853226 | MS.gene91408:intron | 40.0% |
| !! | GTTGGTGTCAAAGAGATTGA+AGG | - | chr1.3:71853393-71853412 | MS.gene91408:intron | 40.0% |
| !! | TTTTAGCTGACCTGTCTTGA+GGG | + | chr1.3:71853438-71853457 | None:intergenic | 40.0% |
| !!! | TTTTTAGCTGACCTGTCTTG+AGG | + | chr1.3:71853439-71853458 | None:intergenic | 40.0% |
| AATTGGAGAGGGGTTAACCA+GGG | - | chr1.3:71854022-71854041 | MS.gene91408:intron | 45.0% | |
| ACCACCAACATTCTTTCTCC+TGG | + | chr1.3:71854652-71854671 | None:intergenic | 45.0% | |
| AGTGCACAATATGCGTCTCT+GGG | - | chr1.3:71853541-71853560 | MS.gene91408:intron | 45.0% | |
| ATGATCCATGATACCAGCAG+AGG | + | chr1.3:71854622-71854641 | None:intergenic | 45.0% | |
| ATTGTCTTGACTACCTCTGC+TGG | - | chr1.3:71854606-71854625 | MS.gene91408:CDS | 45.0% | |
| TAGTGCACAATATGCGTCTC+TGG | - | chr1.3:71853540-71853559 | MS.gene91408:intron | 45.0% | |
| TATGTCGATGATCACAGGTC+TGG | - | chr1.3:71853306-71853325 | MS.gene91408:intron | 45.0% | |
| TCAAGACTCCAACGTCAATG+TGG | + | chr1.3:71853832-71853851 | None:intergenic | 45.0% | |
| ! | GCAAAAGCATGGTATGTGGT+TGG | - | chr1.3:71853158-71853177 | MS.gene91408:intron | 45.0% |
| !! | AGATTGAAGGATGGACTGCT+AGG | - | chr1.3:71853406-71853425 | MS.gene91408:intron | 45.0% |
| !! | ATCTTGGGTTGGAATTGGAG+AGG | - | chr1.3:71854010-71854029 | MS.gene91408:intron | 45.0% |
| !! | TCTTGGGTTGGAATTGGAGA+GGG | - | chr1.3:71854011-71854030 | MS.gene91408:intron | 45.0% |
| GAATTGGAGAGGGGTTAACC+AGG | - | chr1.3:71854021-71854040 | MS.gene91408:intron | 50.0% | |
| GACTACCTCTGCTGGTATCA+TGG | - | chr1.3:71854614-71854633 | MS.gene91408:CDS | 50.0% | |
| GAGGCCAGGAGAAAGAATGT+TGG | - | chr1.3:71854645-71854664 | MS.gene91408:CDS | 50.0% | |
| GCCAGGAGAAAGAATGTTGG+TGG | - | chr1.3:71854648-71854667 | MS.gene91408:CDS | 50.0% | |
| TAGGCTTCTTCCCTCAAGAC+AGG | - | chr1.3:71853425-71853444 | MS.gene91408:intron | 50.0% | |
| TATGCGTCTCTGGGCCTATT+TGG | - | chr1.3:71853550-71853569 | MS.gene91408:intron | 50.0% | |
| TCATGGATCATGAAGAGGCC+AGG | - | chr1.3:71854631-71854650 | MS.gene91408:CDS | 50.0% | |
| TTTGCGCACCACATTGACGT+TGG | - | chr1.3:71853821-71853840 | MS.gene91408:intron | 50.0% | |
| !! | CTTGGGTTGGAATTGGAGAG+GGG | - | chr1.3:71854012-71854031 | MS.gene91408:intron | 50.0% |
| !! | AAGTCAGAGAAGCACTGCCC+TGG | + | chr1.3:71854042-71854061 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 71853036 | 71854695 | 71853036 | ID=MS.gene91408 |
| chr1.3 | mRNA | 71853036 | 71854695 | 71853036 | ID=MS.gene91408.t1;Parent=MS.gene91408 |
| chr1.3 | exon | 71854563 | 71854695 | 71854563 | ID=MS.gene91408.t1.exon1;Parent=MS.gene91408.t1 |
| chr1.3 | CDS | 71854563 | 71854695 | 71854563 | ID=cds.MS.gene91408.t1;Parent=MS.gene91408.t1 |
| chr1.3 | exon | 71854285 | 71854445 | 71854285 | ID=MS.gene91408.t1.exon2;Parent=MS.gene91408.t1 |
| chr1.3 | CDS | 71854285 | 71854445 | 71854285 | ID=cds.MS.gene91408.t1;Parent=MS.gene91408.t1 |
| chr1.3 | exon | 71853036 | 71853134 | 71853036 | ID=MS.gene91408.t1.exon3;Parent=MS.gene91408.t1 |
| chr1.3 | CDS | 71853036 | 71853134 | 71853036 | ID=cds.MS.gene91408.t1;Parent=MS.gene91408.t1 |
| Gene Sequence |
| Protein sequence |
