Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050916.t1 | XP_003626231.1 | 99.4 | 163 | 1 | 0 | 1 | 163 | 1 | 163 | 1.40E-83 | 318.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050916.t1 | O65729 | 87.0 | 162 | 20 | 1 | 4 | 165 | 1 | 161 | 4.4e-75 | 282.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050916.t1 | B7FMF5 | 99.4 | 163 | 1 | 0 | 1 | 163 | 1 | 163 | 9.8e-84 | 318.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049876 | MS.gene050916 | 0.820918 | 5.32E-53 | -1.69E-46 |
| MS.gene050277 | MS.gene050916 | 0.831473 | 1.64E-55 | -1.69E-46 |
| MS.gene050290 | MS.gene050916 | 0.841419 | 4.81E-58 | -1.69E-46 |
| MS.gene050574 | MS.gene050916 | 0.817089 | 3.95E-52 | -1.69E-46 |
| MS.gene050916 | MS.gene051330 | 0.854958 | 8.70E-62 | -1.69E-46 |
| MS.gene050916 | MS.gene051903 | 0.827154 | 1.83E-54 | -1.69E-46 |
| MS.gene050916 | MS.gene052947 | 0.80734 | 5.30E-50 | -1.69E-46 |
| MS.gene050916 | MS.gene054937 | 0.825939 | 3.57E-54 | -1.69E-46 |
| MS.gene050916 | MS.gene055808 | 0.814412 | 1.56E-51 | -1.69E-46 |
| MS.gene050916 | MS.gene056257 | 0.819691 | 1.02E-52 | -1.69E-46 |
| MS.gene050916 | MS.gene056631 | 0.83917 | 1.86E-57 | -1.69E-46 |
| MS.gene050916 | MS.gene06001 | 0.859251 | 4.71E-63 | -1.69E-46 |
| MS.gene050916 | MS.gene060429 | 0.800415 | 1.46E-48 | -1.69E-46 |
| MS.gene050916 | MS.gene064028 | 0.808683 | 2.75E-50 | -1.69E-46 |
| MS.gene050916 | MS.gene065998 | 0.815371 | 9.57E-52 | -1.69E-46 |
| MS.gene050916 | MS.gene066034 | 0.859783 | 3.26E-63 | -1.69E-46 |
| MS.gene050916 | MS.gene066035 | 0.830962 | 2.19E-55 | -1.69E-46 |
| MS.gene050916 | MS.gene066346 | 0.822507 | 2.28E-53 | -1.69E-46 |
| MS.gene050916 | MS.gene066455 | 0.803206 | 3.89E-49 | -1.69E-46 |
| MS.gene050916 | MS.gene067521 | 0.813777 | 2.16E-51 | -1.69E-46 |
| MS.gene050916 | MS.gene067951 | 0.818683 | 1.72E-52 | -1.69E-46 |
| MS.gene050916 | MS.gene068255 | 0.806798 | 6.91E-50 | -1.69E-46 |
| MS.gene050916 | MS.gene069310 | 0.841199 | 5.49E-58 | -1.69E-46 |
| MS.gene050916 | MS.gene069313 | 0.816114 | 6.53E-52 | -1.69E-46 |
| MS.gene050916 | MS.gene069962 | 0.803285 | 3.75E-49 | -1.69E-46 |
| MS.gene050916 | MS.gene070271 | 0.815974 | 7.02E-52 | -1.69E-46 |
| MS.gene050916 | MS.gene070599 | 0.834064 | 3.72E-56 | -1.69E-46 |
| MS.gene050916 | MS.gene07100 | 0.821825 | 3.29E-53 | -1.69E-46 |
| MS.gene050916 | MS.gene071173 | 0.844887 | 5.72E-59 | -1.69E-46 |
| MS.gene050916 | MS.gene071364 | 0.867641 | 1.18E-65 | -1.69E-46 |
| MS.gene050916 | MS.gene071366 | 0.885614 | 6.99E-72 | -1.69E-46 |
| MS.gene050916 | MS.gene071958 | 0.856492 | 3.10E-62 | -1.69E-46 |
| MS.gene050916 | MS.gene07222 | 0.837419 | 5.26E-57 | -1.69E-46 |
| MS.gene050916 | MS.gene072508 | 0.929241 | 9.21E-93 | -1.69E-46 |
| MS.gene050916 | MS.gene072782 | 0.802702 | 4.95E-49 | -1.69E-46 |
| MS.gene050916 | MS.gene073300 | 0.803632 | 3.18E-49 | -1.69E-46 |
| MS.gene050916 | MS.gene073332 | 0.830282 | 3.21E-55 | -1.69E-46 |
| MS.gene050916 | MS.gene073785 | 0.8166 | 5.09E-52 | -1.69E-46 |
| MS.gene050916 | MS.gene074594 | 0.860262 | 2.33E-63 | -1.69E-46 |
| MS.gene050916 | MS.gene08280 | 0.812458 | 4.20E-51 | -1.69E-46 |
| MS.gene050916 | MS.gene08537 | 0.830234 | 3.29E-55 | -1.69E-46 |
| MS.gene050916 | MS.gene08538 | 0.828786 | 7.41E-55 | -1.69E-46 |
| MS.gene050916 | MS.gene09753 | 0.822073 | 2.88E-53 | -1.69E-46 |
| MS.gene050916 | MS.gene09755 | 0.823299 | 1.49E-53 | -1.69E-46 |
| MS.gene050916 | MS.gene09807 | 0.835269 | 1.85E-56 | -1.69E-46 |
| MS.gene050916 | MS.gene20740 | 0.836642 | 8.30E-57 | -1.69E-46 |
| MS.gene050916 | MS.gene21219 | 0.825549 | 4.41E-54 | -1.69E-46 |
| MS.gene050916 | MS.gene21636 | 0.806464 | 8.12E-50 | -1.69E-46 |
| MS.gene050916 | MS.gene22465 | 0.811915 | 5.51E-51 | -1.69E-46 |
| MS.gene050916 | MS.gene22872 | 0.820876 | 5.44E-53 | -1.69E-46 |
| MS.gene050916 | MS.gene22974 | 0.812851 | 3.44E-51 | -1.69E-46 |
| MS.gene050916 | MS.gene23058 | 0.884964 | 1.22E-71 | -1.69E-46 |
| MS.gene050916 | MS.gene23059 | 0.853795 | 1.89E-61 | -1.69E-46 |
| MS.gene050916 | MS.gene23126 | 0.901665 | 2.13E-78 | -1.69E-46 |
| MS.gene050916 | MS.gene23437 | 0.809964 | 1.46E-50 | -1.69E-46 |
| MS.gene050916 | MS.gene24260 | 0.818546 | 1.85E-52 | -1.69E-46 |
| MS.gene050916 | MS.gene24706 | 0.842273 | 2.86E-58 | -1.69E-46 |
| MS.gene050916 | MS.gene24930 | 0.816728 | 4.76E-52 | -1.69E-46 |
| MS.gene050916 | MS.gene26976 | 0.823907 | 1.08E-53 | -1.69E-46 |
| MS.gene050916 | MS.gene26979 | 0.80691 | 6.54E-50 | -1.69E-46 |
| MS.gene050916 | MS.gene27299 | 0.821752 | 3.42E-53 | -1.69E-46 |
| MS.gene050916 | MS.gene27668 | 0.811628 | 6.37E-51 | -1.69E-46 |
| MS.gene050916 | MS.gene27879 | 0.846785 | 1.75E-59 | -1.69E-46 |
| MS.gene050916 | MS.gene29581 | 0.808318 | 3.29E-50 | -1.69E-46 |
| MS.gene050916 | MS.gene30863 | 0.811877 | 5.62E-51 | -1.69E-46 |
| MS.gene050916 | MS.gene30904 | 0.801745 | 7.79E-49 | -1.69E-46 |
| MS.gene050916 | MS.gene31177 | 0.813384 | 2.63E-51 | -1.69E-46 |
| MS.gene050916 | MS.gene31468 | 0.807642 | 4.57E-50 | -1.69E-46 |
| MS.gene050916 | MS.gene32419 | 0.800198 | 1.61E-48 | -1.69E-46 |
| MS.gene050916 | MS.gene33879 | 0.81975 | 9.86E-53 | -1.69E-46 |
| MS.gene050916 | MS.gene35046 | 0.84184 | 3.72E-58 | -1.69E-46 |
| MS.gene050916 | MS.gene35214 | 0.813453 | 2.54E-51 | -1.69E-46 |
| MS.gene050916 | MS.gene35379 | 0.823437 | 1.39E-53 | -1.69E-46 |
| MS.gene050916 | MS.gene36468 | 0.811127 | 8.18E-51 | -1.69E-46 |
| MS.gene050916 | MS.gene37341 | 0.81285 | 3.45E-51 | -1.69E-46 |
| MS.gene050916 | MS.gene39207 | 0.811182 | 7.96E-51 | -1.69E-46 |
| MS.gene050916 | MS.gene40648 | 0.80991 | 1.50E-50 | -1.69E-46 |
| MS.gene050916 | MS.gene41171 | 0.826956 | 2.04E-54 | -1.69E-46 |
| MS.gene050916 | MS.gene41455 | 0.805647 | 1.21E-49 | -1.69E-46 |
| MS.gene050916 | MS.gene41587 | 0.80417 | 2.46E-49 | -1.69E-46 |
| MS.gene050916 | MS.gene41864 | 0.803656 | 3.14E-49 | -1.69E-46 |
| MS.gene050916 | MS.gene41901 | 0.804453 | 2.14E-49 | -1.69E-46 |
| MS.gene050916 | MS.gene43992 | 0.803259 | 3.80E-49 | -1.69E-46 |
| MS.gene050916 | MS.gene44023 | 0.832326 | 1.01E-55 | -1.69E-46 |
| MS.gene050916 | MS.gene44141 | 0.807344 | 5.29E-50 | -1.69E-46 |
| MS.gene050916 | MS.gene44620 | 0.804998 | 1.65E-49 | -1.69E-46 |
| MS.gene050916 | MS.gene45470 | 0.81304 | 3.13E-51 | -1.69E-46 |
| MS.gene050916 | MS.gene46488 | 0.826344 | 2.86E-54 | -1.69E-46 |
| MS.gene050916 | MS.gene46489 | 0.82774 | 1.32E-54 | -1.69E-46 |
| MS.gene050916 | MS.gene47176 | 0.807591 | 4.69E-50 | -1.69E-46 |
| MS.gene050916 | MS.gene49965 | 0.84916 | 3.86E-60 | -1.69E-46 |
| MS.gene050916 | MS.gene50252 | 0.834812 | 2.41E-56 | -1.69E-46 |
| MS.gene050916 | MS.gene51560 | 0.833594 | 4.88E-56 | -1.69E-46 |
| MS.gene050916 | MS.gene51562 | 0.847496 | 1.11E-59 | -1.69E-46 |
| MS.gene050916 | MS.gene54043 | 0.809495 | 1.84E-50 | -1.69E-46 |
| MS.gene050916 | MS.gene54282 | 0.805488 | 1.30E-49 | -1.69E-46 |
| MS.gene050916 | MS.gene55732 | 0.86013 | 2.56E-63 | -1.69E-46 |
| MS.gene050916 | MS.gene57391 | 0.810735 | 9.94E-51 | -1.69E-46 |
| MS.gene050916 | MS.gene58215 | 0.893712 | 4.87E-75 | -1.69E-46 |
| MS.gene050916 | MS.gene58448 | 0.806701 | 7.24E-50 | -1.69E-46 |
| MS.gene050916 | MS.gene58776 | 0.889942 | 1.54E-73 | -1.69E-46 |
| MS.gene050916 | MS.gene60259 | 0.858642 | 7.16E-63 | -1.69E-46 |
| MS.gene050916 | MS.gene60261 | 0.826718 | 2.33E-54 | -1.69E-46 |
| MS.gene050916 | MS.gene61677 | 0.855718 | 5.23E-62 | -1.69E-46 |
| MS.gene050916 | MS.gene61679 | 0.835361 | 1.75E-56 | -1.69E-46 |
| MS.gene050916 | MS.gene65076 | 0.880882 | 3.81E-70 | -1.69E-46 |
| MS.gene050916 | MS.gene67884 | 0.800594 | 1.34E-48 | -1.69E-46 |
| MS.gene050916 | MS.gene69814 | 0.805415 | 1.35E-49 | -1.69E-46 |
| MS.gene050916 | MS.gene69921 | 0.802047 | 6.75E-49 | -1.69E-46 |
| MS.gene050916 | MS.gene69947 | 0.805073 | 1.59E-49 | -1.69E-46 |
| MS.gene050916 | MS.gene70215 | 0.809204 | 2.12E-50 | -1.69E-46 |
| MS.gene050916 | MS.gene71299 | 0.800954 | 1.13E-48 | -1.69E-46 |
| MS.gene050916 | MS.gene71949 | 0.836136 | 1.12E-56 | -1.69E-46 |
| MS.gene050916 | MS.gene72285 | 0.811199 | 7.89E-51 | -1.69E-46 |
| MS.gene050916 | MS.gene73243 | 0.801637 | 8.20E-49 | -1.69E-46 |
| MS.gene050916 | MS.gene75171 | 0.802877 | 4.55E-49 | -1.69E-46 |
| MS.gene050916 | MS.gene75625 | 0.834041 | 3.77E-56 | -1.69E-46 |
| MS.gene050916 | MS.gene76031 | 0.800894 | 1.16E-48 | -1.69E-46 |
| MS.gene050916 | MS.gene76576 | 0.821394 | 4.13E-53 | -1.69E-46 |
| MS.gene050916 | MS.gene77160 | 0.877009 | 8.86E-69 | -1.69E-46 |
| MS.gene050916 | MS.gene77163 | 0.879702 | 1.00E-69 | -1.69E-46 |
| MS.gene050916 | MS.gene77282 | 0.832822 | 7.59E-56 | -1.69E-46 |
| MS.gene050916 | MS.gene78764 | 0.824232 | 9.02E-54 | -1.69E-46 |
| MS.gene050916 | MS.gene80786 | 0.822251 | 2.62E-53 | -1.69E-46 |
| MS.gene050916 | MS.gene80886 | 0.807913 | 4.01E-50 | -1.69E-46 |
| MS.gene050916 | MS.gene81001 | 0.830163 | 3.43E-55 | -1.69E-46 |
| MS.gene050916 | MS.gene81099 | 0.804386 | 2.21E-49 | -1.69E-46 |
| MS.gene050916 | MS.gene81493 | 0.8519 | 6.56E-61 | -1.69E-46 |
| MS.gene050916 | MS.gene82767 | 0.802798 | 4.73E-49 | -1.69E-46 |
| MS.gene050916 | MS.gene83135 | 0.80515 | 1.53E-49 | -1.69E-46 |
| MS.gene050916 | MS.gene83217 | 0.810336 | 1.21E-50 | -1.69E-46 |
| MS.gene050916 | MS.gene83961 | 0.86447 | 1.19E-64 | -1.69E-46 |
| MS.gene050916 | MS.gene84455 | 0.849706 | 2.72E-60 | -1.69E-46 |
| MS.gene050916 | MS.gene87190 | 0.801498 | 8.75E-49 | -1.69E-46 |
| MS.gene050916 | MS.gene87309 | 0.806619 | 7.53E-50 | -1.69E-46 |
| MS.gene050916 | MS.gene89562 | 0.857995 | 1.12E-62 | -1.69E-46 |
| MS.gene050916 | MS.gene89721 | 0.84936 | 3.40E-60 | -1.69E-46 |
| MS.gene050916 | MS.gene90833 | 0.810196 | 1.30E-50 | -1.69E-46 |
| MS.gene050916 | MS.gene90981 | 0.801436 | 9.01E-49 | -1.69E-46 |
| MS.gene050916 | MS.gene91408 | 0.8181 | 2.34E-52 | -1.69E-46 |
| MS.gene050916 | MS.gene91621 | 0.800261 | 1.57E-48 | -1.69E-46 |
| MS.gene050916 | MS.gene91622 | 0.814772 | 1.30E-51 | -1.69E-46 |
| MS.gene050916 | MS.gene92572 | 0.807764 | 4.31E-50 | -1.69E-46 |
| MS.gene050916 | MS.gene92970 | 0.846215 | 2.50E-59 | -1.69E-46 |
| MS.gene050916 | MS.gene93719 | 0.844648 | 6.64E-59 | -1.69E-46 |
| MS.gene050916 | MS.gene95828 | 0.817832 | 2.69E-52 | -1.69E-46 |
| MS.gene050916 | MS.gene96322 | 0.848969 | 4.37E-60 | -1.69E-46 |
| MS.gene050916 | MS.gene96338 | 0.807772 | 4.29E-50 | -1.69E-46 |
| MS.gene050916 | MS.gene97932 | 0.834788 | 2.45E-56 | -1.69E-46 |
| MS.gene050916 | MS.gene99599 | 0.825635 | 4.21E-54 | -1.69E-46 |
| MS.gene050916 | MS.gene99657 | 0.834761 | 2.49E-56 | -1.69E-46 |
| MS.gene050916 | MS.gene99744 | 0.825468 | 4.61E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050916.t1 | MTR_7g112880 | 99.394 | 165 | 1 | 0 | 1 | 165 | 1 | 165 | 2.08e-119 | 335 |
| MS.gene050916.t1 | MTR_7g108805 | 89.091 | 165 | 18 | 0 | 1 | 165 | 1 | 165 | 1.40e-107 | 305 |
| MS.gene050916.t1 | MTR_1g083460 | 86.061 | 165 | 23 | 0 | 1 | 165 | 1 | 165 | 5.77e-104 | 296 |
| MS.gene050916.t1 | MTR_7g112880 | 99.107 | 112 | 1 | 0 | 54 | 165 | 1 | 112 | 6.16e-79 | 230 |
| MS.gene050916.t1 | MTR_4g005170 | 84.848 | 33 | 5 | 0 | 133 | 165 | 582 | 614 | 2.05e-12 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050916.t1 | AT5G27850 | 81.212 | 165 | 31 | 0 | 1 | 165 | 1 | 165 | 1.79e-99 | 284 |
| MS.gene050916.t1 | AT3G05590 | 80.606 | 165 | 32 | 0 | 1 | 165 | 1 | 165 | 1.50e-98 | 282 |
| MS.gene050916.t1 | AT2G47570 | 76.829 | 164 | 37 | 1 | 3 | 165 | 1 | 164 | 3.83e-90 | 261 |
| MS.gene050916.t1 | AT3G05590 | 79.464 | 112 | 23 | 0 | 54 | 165 | 1 | 112 | 2.75e-65 | 196 |
| MS.gene050916.t1 | AT3G05590 | 79.464 | 112 | 23 | 0 | 54 | 165 | 1 | 112 | 2.75e-65 | 196 |
| MS.gene050916.t1 | AT5G27850 | 78.571 | 112 | 24 | 0 | 54 | 165 | 1 | 112 | 2.96e-64 | 193 |
Find 57 sgRNAs with CRISPR-Local
Find 165 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTGCTTCCCTAGCATTCTT+TGG | 0.206364 | 7.1:-3437860 | None:intergenic |
| ATCAACTTTGACAGAGAAAT+TGG | 0.227766 | 7.1:-3437098 | None:intergenic |
| TAGCATTCTTTGGGCCTCTT+AGG | 0.233236 | 7.1:-3437850 | None:intergenic |
| AGGTAGATATCATTGGATTT+AGG | 0.281327 | 7.1:-3435686 | None:intergenic |
| GGTAAAATTGGTGTCGTTGT+GGG | 0.314974 | 7.1:+3437253 | MS.gene050916:CDS |
| CTGCTTCCCTAGCATTCTTT+GGG | 0.325698 | 7.1:-3437859 | None:intergenic |
| GGGCTGTAACAGATGATATC+AGG | 0.365645 | 7.1:+3437275 | MS.gene050916:CDS |
| TATATCGCTTCCTTGTTAGA+AGG | 0.375930 | 7.1:+3437012 | MS.gene050916:CDS |
| GTTATGCAGGACGGTAAAAT+TGG | 0.388471 | 7.1:+3437241 | MS.gene050916:intron |
| GGATTTAGGTTCGGTTCGTT+TGG | 0.400306 | 7.1:-3435672 | None:intergenic |
| GAGCTTGAGGTAGATATCAT+TGG | 0.411467 | 7.1:-3435693 | None:intergenic |
| CTTTGATCTTACATAAGGCT+TGG | 0.418522 | 7.1:-3437924 | None:intergenic |
| CAGGGGATCGATCTCAAAGC+TGG | 0.420599 | 7.1:+3435632 | MS.gene050916:intron |
| GATATCATTGGATTTAGGTT+CGG | 0.438911 | 7.1:-3435681 | None:intergenic |
| TCTGTCCAAGGGGAGCTCTA+AGG | 0.443443 | 7.1:-3437405 | None:intergenic |
| GGGCAAGTTGATCAAATGTT+AGG | 0.445307 | 7.1:-3437384 | None:intergenic |
| CGGTAAAATTGGTGTCGTTG+TGG | 0.446137 | 7.1:+3437252 | MS.gene050916:CDS |
| GTGCCGTCTCTGTGAACCTA+AGG | 0.461512 | 7.1:-3437330 | None:intergenic |
| AAACACTTTGGTCGTGCTCC+TGG | 0.468460 | 7.1:+3437884 | MS.gene050916:CDS |
| CTGTCCAAGGGGAGCTCTAA+GGG | 0.473811 | 7.1:-3437404 | None:intergenic |
| GTAAAATTGGTGTCGTTGTG+GGG | 0.476743 | 7.1:+3437254 | MS.gene050916:CDS |
| CATTCTTTGGGCCTCTTAGG+AGG | 0.481833 | 7.1:-3437847 | None:intergenic |
| TAAGAGGCCCAAAGAATGCT+AGG | 0.491610 | 7.1:+3437852 | MS.gene050916:CDS |
| TGAATTCAGGTCCTCCTAAG+AGG | 0.506122 | 7.1:+3437836 | MS.gene050916:intron |
| GAATGGCTGTGTGGCACACC+AGG | 0.520029 | 7.1:-3437902 | None:intergenic |
| CTCATACCGTGTTCTGTCCA+AGG | 0.524348 | 7.1:-3437417 | None:intergenic |
| ATCTTACATAAGGCTTGGAA+TGG | 0.527336 | 7.1:-3437919 | None:intergenic |
| TGCCCTTAGGTTCACAGAGA+CGG | 0.538036 | 7.1:+3437327 | MS.gene050916:CDS |
| AAAGTTGATCGAGTACATGA+AGG | 0.551641 | 7.1:+3437112 | MS.gene050916:CDS |
| AAGTTGATCGAGTACATGAA+GGG | 0.557741 | 7.1:+3437113 | MS.gene050916:CDS |
| GGACCTTGACGAGGAGCTTG+AGG | 0.569815 | 7.1:-3435706 | None:intergenic |
| AGGGGATCGATCTCAAAGCT+GGG | 0.574140 | 7.1:+3435633 | MS.gene050916:intron |
| CTTGCCCTTAGAGCTCCCCT+TGG | 0.575267 | 7.1:+3437400 | MS.gene050916:CDS |
| TGCTGTCAGTCCTTCTAACA+AGG | 0.579764 | 7.1:-3437022 | None:intergenic |
| GGCTGTAACAGATGATATCA+GGG | 0.589836 | 7.1:+3437276 | MS.gene050916:CDS |
| AGGGAAGCAGTAAAACACTT+TGG | 0.592083 | 7.1:+3437872 | MS.gene050916:CDS |
| TCATACCGTGTTCTGTCCAA+GGG | 0.595030 | 7.1:-3437416 | None:intergenic |
| CAAGCGCTTGTTCATGAGCA+AGG | 0.595633 | 7.1:+3437064 | MS.gene050916:CDS |
| AACTTTGACAGAGAAATTGG+AGG | 0.595797 | 7.1:-3437095 | None:intergenic |
| CGTGCAAGAATAGAGAAGGC+GGG | 0.608166 | 7.1:+3437352 | MS.gene050916:CDS |
| TTGACAGAGAAATTGGAGGT+CGG | 0.608358 | 7.1:-3437091 | None:intergenic |
| AGCTCCCCTTGGACAGAACA+CGG | 0.610780 | 7.1:+3437411 | MS.gene050916:CDS |
| TGCCGTCTCTGTGAACCTAA+GGG | 0.611665 | 7.1:-3437329 | None:intergenic |
| CTACCTCAAGCTCCTCGTCA+AGG | 0.612377 | 7.1:+3435703 | MS.gene050916:CDS |
| TAAAATTGGTGTCGTTGTGG+GGG | 0.613763 | 7.1:+3437255 | MS.gene050916:CDS |
| GGCACGTGCAAGAATAGAGA+AGG | 0.623253 | 7.1:+3437348 | MS.gene050916:CDS |
| AAGAGGCCCAAAGAATGCTA+GGG | 0.636036 | 7.1:+3437853 | MS.gene050916:CDS |
| GGGGATCGATCTCAAAGCTG+GGG | 0.637375 | 7.1:+3435634 | MS.gene050916:intron |
| AAATGGAATGGACCTTGACG+AGG | 0.641410 | 7.1:-3435715 | None:intergenic |
| AGTTGATCGAGTACATGAAG+GGG | 0.649783 | 7.1:+3437114 | MS.gene050916:CDS |
| GATCGAGTACATGAAGGGGA+AGG | 0.663524 | 7.1:+3437118 | MS.gene050916:CDS |
| ACGTGCAAGAATAGAGAAGG+CGG | 0.663924 | 7.1:+3437351 | MS.gene050916:CDS |
| GCAAGAATAGAGAAGGCGGG+TGG | 0.710757 | 7.1:+3437355 | MS.gene050916:CDS |
| CATACCGTGTTCTGTCCAAG+GGG | 0.721874 | 7.1:-3437415 | None:intergenic |
| GGGATCGATCTCAAAGCTGG+GGG | 0.738953 | 7.1:+3435635 | MS.gene050916:CDS |
| GACTGACAGCAATTTCAATG+CGG | 0.745385 | 7.1:+3437034 | MS.gene050916:CDS |
| TAAGGCTTGGAATGGCTGTG+TGG | 0.750805 | 7.1:-3437911 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATACGATAAAATAAAAATTA+TGG | - | chr7.1:3435998-3436017 | None:intergenic | 10.0% |
| !! | AACAAGTATATTAATTAAGT+TGG | - | chr7.1:3437817-3437836 | None:intergenic | 15.0% |
| !! | AACTAAACAATTATAATTTC+TGG | - | chr7.1:3437178-3437197 | None:intergenic | 15.0% |
| !! | AGAATGCAAATTATTTATAA+CGG | - | chr7.1:3436667-3436686 | None:intergenic | 15.0% |
| !!! | ATTTTATAAGACATAGAAAA+TGG | - | chr7.1:3435735-3435754 | None:intergenic | 15.0% |
| !! | AAAAAATGTTTATGATTGTG+TGG | + | chr7.1:3436890-3436909 | MS.gene050916:intron | 20.0% |
| !! | AACTTTGACATTAACAAAAA+TGG | - | chr7.1:3436705-3436724 | None:intergenic | 20.0% |
| !! | AGCTTAATTATCAACAAAAA+TGG | - | chr7.1:3436227-3436246 | None:intergenic | 20.0% |
| !! | CTTTAATATCAATATACTGA+GGG | + | chr7.1:3436833-3436852 | MS.gene050916:intron | 20.0% |
| !! | GTCAAAGTTTATAACATATA+AGG | + | chr7.1:3436716-3436735 | MS.gene050916:intron | 20.0% |
| !! | GTTTATAACATATAAGGATT+TGG | + | chr7.1:3436722-3436741 | MS.gene050916:intron | 20.0% |
| !! | TAATTTGAATTTGATATGCA+GGG | + | chr7.1:3435614-3435633 | MS.gene050916:intron | 20.0% |
| !! | TCTTTAATATCAATATACTG+AGG | + | chr7.1:3436832-3436851 | MS.gene050916:intron | 20.0% |
| !!! | AAATTACTTTTCAATGTATC+AGG | - | chr7.1:3436161-3436180 | None:intergenic | 20.0% |
| !!! | TCATCAATTATAAGAGATTT+TGG | + | chr7.1:3437534-3437553 | MS.gene050916:intron | 20.0% |
| !!! | TTAATATACTTGTTGAATTC+AGG | + | chr7.1:3437823-3437842 | MS.gene050916:intron | 20.0% |
| !!! | TTAATTTGAATTTGATATGC+AGG | + | chr7.1:3435613-3435632 | MS.gene050916:intron | 20.0% |
| ! | AATTATAATGCGAATACATG+TGG | + | chr7.1:3436255-3436274 | MS.gene050916:intron | 25.0% |
| ! | AATTTGAATTTGATATGCAG+GGG | + | chr7.1:3435615-3435634 | MS.gene050916:intron | 25.0% |
| ! | AGAGCTAATATAACAAAACT+TGG | - | chr7.1:3437729-3437748 | None:intergenic | 25.0% |
| ! | ATAAGACATAGAAAATGGAA+TGG | - | chr7.1:3435730-3435749 | None:intergenic | 25.0% |
| ! | ATTCTATCTCCATATGAAAA+TGG | - | chr7.1:3436115-3436134 | None:intergenic | 25.0% |
| ! | TTAAAATAAAATACACTGCG+AGG | - | chr7.1:3435926-3435945 | None:intergenic | 25.0% |
| ! | TTATGTGATTATTGTGATCA+AGG | + | chr7.1:3435784-3435803 | MS.gene050916:intron | 25.0% |
| !! | ACTATGATCTAATTTTCTCA+TGG | + | chr7.1:3437209-3437228 | MS.gene050916:intron | 25.0% |
| !! | CTATGATCTAATTTTCTCAT+GGG | + | chr7.1:3437210-3437229 | MS.gene050916:intron | 25.0% |
| !!! | ATTTGGTGTCTATTTTAGAT+TGG | + | chr7.1:3437562-3437581 | MS.gene050916:intron | 25.0% |
| !!! | TGCTCTAAAAACACAAATAT+TGG | - | chr7.1:3437449-3437468 | None:intergenic | 25.0% |
| !!! | TTTTAGAGTAGATAGAGATT+AGG | - | chr7.1:3435548-3435567 | None:intergenic | 25.0% |
| AATTATAGTCCTAGACCTTA+CGG | - | chr7.1:3436059-3436078 | None:intergenic | 30.0% | |
| AGGTAGATATCATTGGATTT+AGG | - | chr7.1:3435689-3435708 | None:intergenic | 30.0% | |
| ATAGCTTAAAACACACACTA+AGG | - | chr7.1:3436304-3436323 | None:intergenic | 30.0% | |
| ATCAACTTTGACAGAGAAAT+TGG | - | chr7.1:3437101-3437120 | None:intergenic | 30.0% | |
| ATGCATATACTTAGTCCTAA+TGG | - | chr7.1:3436433-3436452 | None:intergenic | 30.0% | |
| ATGGTTAAAAGTAACATCAC+TGG | - | chr7.1:3436790-3436809 | None:intergenic | 30.0% | |
| GTACAATTGATTATATCCAG+AGG | - | chr7.1:3436618-3436637 | None:intergenic | 30.0% | |
| GTTGGAACTAATTATATTCC+TGG | - | chr7.1:3436580-3436599 | None:intergenic | 30.0% | |
| TATTAAAAATTGCTGCCCTT+AGG | + | chr7.1:3437314-3437333 | MS.gene050916:CDS | 30.0% | |
| TGGTTAAAAGTAACATCACT+GGG | - | chr7.1:3436789-3436808 | None:intergenic | 30.0% | |
| TGGTTTGAATGGTATATGTT+TGG | + | chr7.1:3437590-3437609 | MS.gene050916:intron | 30.0% | |
| TTGGAACTAATTGTATTCCT+TGG | - | chr7.1:3435887-3435906 | None:intergenic | 30.0% | |
| ! | AAATGTGTTTTCGATCAACT+TGG | - | chr7.1:3436501-3436520 | None:intergenic | 30.0% |
| ! | AAGCCTTATGTAAGATCAAA+GGG | + | chr7.1:3437926-3437945 | MS.gene050916:intron | 30.0% |
| ! | AATTTTATTCCTGGACCTTA+TGG | - | chr7.1:3436365-3436384 | None:intergenic | 30.0% |
| ! | ACTTTTCAATGTATCAGGAA+TGG | - | chr7.1:3436156-3436175 | None:intergenic | 30.0% |
| ! | GAAGTATCAAAACTGTAGAA+AGG | - | chr7.1:3438027-3438046 | None:intergenic | 30.0% |
| ! | GATATCATTGGATTTAGGTT+CGG | - | chr7.1:3435684-3435703 | None:intergenic | 30.0% |
| ! | GTTGGAACTAATTTTATTCC+TGG | - | chr7.1:3436374-3436393 | None:intergenic | 30.0% |
| !! | GTCTTCTCTGTATTTAGTTT+TGG | + | chr7.1:3435584-3435603 | MS.gene050916:intron | 30.0% |
| !! | TAGGTGTTTGTTGTTGATAT+AGG | + | chr7.1:3436753-3436772 | MS.gene050916:intron | 30.0% |
| !! | TCTATTTTAGATTGGAGACT+TGG | + | chr7.1:3437570-3437589 | MS.gene050916:intron | 30.0% |
| !!! | AAGAGATTTTGGTGTCTATT+TGG | + | chr7.1:3437545-3437564 | MS.gene050916:intron | 30.0% |
| AACTTTGACAGAGAAATTGG+AGG | - | chr7.1:3437098-3437117 | None:intergenic | 35.0% | |
| AATTATATTCCTGGACCTTC+CGG | - | chr7.1:3436571-3436590 | None:intergenic | 35.0% | |
| ATACTTAGTCCTAATGGTGA+TGG | - | chr7.1:3436427-3436446 | None:intergenic | 35.0% | |
| ATCCATTGCGTCATTATGAT+TGG | + | chr7.1:3437488-3437507 | MS.gene050916:intron | 35.0% | |
| ATCTTACATAAGGCTTGGAA+TGG | - | chr7.1:3437922-3437941 | None:intergenic | 35.0% | |
| ATGGGATTATTGTGTTATGC+AGG | + | chr7.1:3437228-3437247 | MS.gene050916:intron | 35.0% | |
| CTTATGTAAGATCAAAGGGA+AGG | + | chr7.1:3437930-3437949 | MS.gene050916:intron | 35.0% | |
| CTTCCCTTTGATCTTACATA+AGG | - | chr7.1:3437932-3437951 | None:intergenic | 35.0% | |
| CTTTGATCTTACATAAGGCT+TGG | - | chr7.1:3437927-3437946 | None:intergenic | 35.0% | |
| GATTATTGTGTTATGCAGGA+CGG | + | chr7.1:3437232-3437251 | MS.gene050916:intron | 35.0% | |
| TAATGACGCAATGGATAGTA+AGG | - | chr7.1:3437484-3437503 | None:intergenic | 35.0% | |
| TATATCGCTTCCTTGTTAGA+AGG | + | chr7.1:3437012-3437031 | MS.gene050916:CDS | 35.0% | |
| TCATGTAATCAGCATTAGCA+TGG | - | chr7.1:3436809-3436828 | None:intergenic | 35.0% | |
| TCCATTGCGTCATTATGATT+GGG | + | chr7.1:3437489-3437508 | MS.gene050916:intron | 35.0% | |
| TGCAACACATGGAATTAGAA+TGG | - | chr7.1:3436984-3437003 | None:intergenic | 35.0% | |
| TGTTGTTGATATAGGACTTG+AGG | + | chr7.1:3436761-3436780 | MS.gene050916:intron | 35.0% | |
| TTGGCTTCATAAAAGCTTGT+TGG | - | chr7.1:3437798-3437817 | None:intergenic | 35.0% | |
| ! | AAAGTTGATCGAGTACATGA+AGG | + | chr7.1:3437112-3437131 | MS.gene050916:CDS | 35.0% |
| ! | AAGTTGATCGAGTACATGAA+GGG | + | chr7.1:3437113-3437132 | MS.gene050916:CDS | 35.0% |
| ! | AGGGCAGCAATTTTTAATAC+TGG | - | chr7.1:3437313-3437332 | None:intergenic | 35.0% |
| ! | CAAGCCTTATGTAAGATCAA+AGG | + | chr7.1:3437925-3437944 | MS.gene050916:intron | 35.0% |
| ! | GGGCAGCAATTTTTAATACT+GGG | - | chr7.1:3437312-3437331 | None:intergenic | 35.0% |
| ! | TAAGGATTTGGCTTCATGAT+AGG | + | chr7.1:3436734-3436753 | MS.gene050916:intron | 35.0% |
| !! | AATTGTATTCCTTGGCCTTA+CGG | - | chr7.1:3435879-3435898 | None:intergenic | 35.0% |
| AAAGGGAAGGAAACAAGAGA+AGG | + | chr7.1:3437943-3437962 | MS.gene050916:intron | 40.0% | |
| AATGTATCAGGAATGGTTCC+TGG | - | chr7.1:3436149-3436168 | None:intergenic | 40.0% | |
| AGAGGAAGAGTAGAGGATTT+AGG | + | chr7.1:3437975-3437994 | MS.gene050916:intron | 40.0% | |
| AGGGAAGCAGTAAAACACTT+TGG | + | chr7.1:3437872-3437891 | MS.gene050916:CDS | 40.0% | |
| AGTTGATCGAGTACATGAAG+GGG | + | chr7.1:3437114-3437133 | MS.gene050916:CDS | 40.0% | |
| ATAGAATAGCTTCTTCAGCC+AGG | + | chr7.1:3436128-3436147 | MS.gene050916:intron | 40.0% | |
| ATAGCTGATTGTGCAACACA+TGG | - | chr7.1:3436995-3437014 | None:intergenic | 40.0% | |
| GACTGACAGCAATTTCAATG+CGG | + | chr7.1:3437034-3437053 | MS.gene050916:CDS | 40.0% | |
| GAGCTTGAGGTAGATATCAT+TGG | - | chr7.1:3435696-3435715 | None:intergenic | 40.0% | |
| GAGGAAGAGTAGAGGATTTA+GGG | + | chr7.1:3437976-3437995 | MS.gene050916:intron | 40.0% | |
| GGCTGTAACAGATGATATCA+GGG | + | chr7.1:3437276-3437295 | MS.gene050916:CDS | 40.0% | |
| GTTATGCAGGACGGTAAAAT+TGG | + | chr7.1:3437241-3437260 | MS.gene050916:intron | 40.0% | |
| TCCCAATCATAATGACGCAA+TGG | - | chr7.1:3437493-3437512 | None:intergenic | 40.0% | |
| TGGTAAGCTCAACATAACCA+AGG | - | chr7.1:3437709-3437728 | None:intergenic | 40.0% | |
| TTCCTGTGAGTAGTTGTGAT+GGG | + | chr7.1:3437679-3437698 | MS.gene050916:intron | 40.0% | |
| TTGACAGAGAAATTGGAGGT+CGG | - | chr7.1:3437094-3437113 | None:intergenic | 40.0% | |
| ! | CCTCTCAGTCCATTTTCATA+TGG | + | chr7.1:3436103-3436122 | MS.gene050916:intron | 40.0% |
| ! | GATTGGAGACTTGGTTTGAA+TGG | + | chr7.1:3437579-3437598 | MS.gene050916:intron | 40.0% |
| !! | CCATATGAAAATGGACTGAG+AGG | - | chr7.1:3436106-3436125 | None:intergenic | 40.0% |
| !! | GGGCAAGTTGATCAAATGTT+AGG | - | chr7.1:3437387-3437406 | None:intergenic | 40.0% |
| !! | GGTAAAATTGGTGTCGTTGT+GGG | + | chr7.1:3437253-3437272 | MS.gene050916:CDS | 40.0% |
| !! | GTAAAATTGGTGTCGTTGTG+GGG | + | chr7.1:3437254-3437273 | MS.gene050916:CDS | 40.0% |
| !! | TAAAATTGGTGTCGTTGTGG+GGG | + | chr7.1:3437255-3437274 | MS.gene050916:CDS | 40.0% |
| AAATGGAATGGACCTTGACG+AGG | - | chr7.1:3435718-3435737 | None:intergenic | 45.0% | |
| AAGAGGCCCAAAGAATGCTA+GGG | + | chr7.1:3437853-3437872 | MS.gene050916:CDS | 45.0% | |
| AATGTGATCCCAGCTCTATG+AGG | + | chr7.1:3435853-3435872 | MS.gene050916:intron | 45.0% | |
| ACCTTATGGTCTCATAGAGC+TGG | - | chr7.1:3436351-3436370 | None:intergenic | 45.0% | |
| ACGTGCAAGAATAGAGAAGG+CGG | + | chr7.1:3437351-3437370 | MS.gene050916:CDS | 45.0% | |
| ACTGCTTCCCTAGCATTCTT+TGG | - | chr7.1:3437863-3437882 | None:intergenic | 45.0% | |
| AGAGGAAAGAGGAAGAGTAG+AGG | + | chr7.1:3437968-3437987 | MS.gene050916:intron | 45.0% | |
| AGGCTCAGACAAATGTGTGT+TGG | - | chr7.1:3435906-3435925 | None:intergenic | 45.0% | |
| ATCCCATCACAACTACTCAC+AGG | - | chr7.1:3437684-3437703 | None:intergenic | 45.0% | |
| CCTTATGGTCTCATAGAGCT+GGG | - | chr7.1:3436350-3436369 | None:intergenic | 45.0% | |
| CTGCTTCCCTAGCATTCTTT+GGG | - | chr7.1:3437862-3437881 | None:intergenic | 45.0% | |
| CTTCCTGTGAGTAGTTGTGA+TGG | + | chr7.1:3437678-3437697 | MS.gene050916:intron | 45.0% | |
| GGGCTGTAACAGATGATATC+AGG | + | chr7.1:3437275-3437294 | MS.gene050916:CDS | 45.0% | |
| TAAGAGGCCCAAAGAATGCT+AGG | + | chr7.1:3437852-3437871 | MS.gene050916:CDS | 45.0% | |
| TAGCATTCTTTGGGCCTCTT+AGG | - | chr7.1:3437853-3437872 | None:intergenic | 45.0% | |
| TCATACCGTGTTCTGTCCAA+GGG | - | chr7.1:3437419-3437438 | None:intergenic | 45.0% | |
| TCTACTCTTCCTCTTTCCTC+TGG | - | chr7.1:3437969-3437988 | None:intergenic | 45.0% | |
| TCTATGAGACCATAAGGTCC+AGG | + | chr7.1:3436353-3436372 | MS.gene050916:intron | 45.0% | |
| TCTCTCACACCATCACCATT+AGG | + | chr7.1:3436415-3436434 | MS.gene050916:intron | 45.0% | |
| TGAATTCAGGTCCTCCTAAG+AGG | + | chr7.1:3437836-3437855 | MS.gene050916:intron | 45.0% | |
| TGCTGTCAGTCCTTCTAACA+AGG | - | chr7.1:3437025-3437044 | None:intergenic | 45.0% | |
| ! | GGATTTAGGTTCGGTTCGTT+TGG | - | chr7.1:3435675-3435694 | None:intergenic | 45.0% |
| ! | TAGTTGTGATGGGATAGCCT+TGG | + | chr7.1:3437689-3437708 | MS.gene050916:intron | 45.0% |
| !! | CGGTAAAATTGGTGTCGTTG+TGG | + | chr7.1:3437252-3437271 | MS.gene050916:CDS | 45.0% |
| !! | TAAATAAATAAATACAAAAA+CGG | - | chr7.1:3435763-3435782 | None:intergenic | 5.0% |
| AAACACTTTGGTCGTGCTCC+TGG | + | chr7.1:3437884-3437903 | MS.gene050916:CDS | 50.0% | |
| AAGAGAAGGCCAGAGGAAAG+AGG | + | chr7.1:3437957-3437976 | MS.gene050916:intron | 50.0% | |
| AGAGGCTCAGACAAGTGTGT+TGG | - | chr7.1:3436392-3436411 | None:intergenic | 50.0% | |
| AGGAAACAAGAGAAGGCCAG+AGG | + | chr7.1:3437950-3437969 | MS.gene050916:intron | 50.0% | |
| AGGGGATCGATCTCAAAGCT+GGG | + | chr7.1:3435633-3435652 | MS.gene050916:intron | 50.0% | |
| CAAGCGCTTGTTCATGAGCA+AGG | + | chr7.1:3437064-3437083 | MS.gene050916:CDS | 50.0% | |
| CACACATTTGTCTGAGCCTC+TGG | + | chr7.1:3435907-3435926 | MS.gene050916:intron | 50.0% | |
| CATACCGTGTTCTGTCCAAG+GGG | - | chr7.1:3437418-3437437 | None:intergenic | 50.0% | |
| CATTCTTTGGGCCTCTTAGG+AGG | - | chr7.1:3437850-3437869 | None:intergenic | 50.0% | |
| CCCAGCTCTATGAGACCATA+AGG | + | chr7.1:3436347-3436366 | MS.gene050916:intron | 50.0% | |
| CGTGCAAGAATAGAGAAGGC+GGG | + | chr7.1:3437352-3437371 | MS.gene050916:CDS | 50.0% | |
| CTCATACCGTGTTCTGTCCA+AGG | - | chr7.1:3437420-3437439 | None:intergenic | 50.0% | |
| GATCGAGTACATGAAGGGGA+AGG | + | chr7.1:3437118-3437137 | MS.gene050916:CDS | 50.0% | |
| GGCACGTGCAAGAATAGAGA+AGG | + | chr7.1:3437348-3437367 | MS.gene050916:CDS | 50.0% | |
| TAAGGCTTGGAATGGCTGTG+TGG | - | chr7.1:3437914-3437933 | None:intergenic | 50.0% | |
| TCTATGAGGCCGTAAGGTCT+AGG | + | chr7.1:3436047-3436066 | MS.gene050916:intron | 50.0% | |
| TGATCCCAGCTCTATGAGAC+CGG | + | chr7.1:3436343-3436362 | MS.gene050916:intron | 50.0% | |
| TGCCCTTAGGTTCACAGAGA+CGG | + | chr7.1:3437327-3437346 | MS.gene050916:CDS | 50.0% | |
| TGCCGTCTCTGTGAACCTAA+GGG | - | chr7.1:3437332-3437351 | None:intergenic | 50.0% | |
| ! | TGATGGTGTGAGAGATGCAG+AGG | - | chr7.1:3436410-3436429 | None:intergenic | 50.0% |
| ACCTTACGGCCTCATAGAGC+TGG | - | chr7.1:3436045-3436064 | None:intergenic | 55.0% | |
| ACCTTCCGGTCTCATAGAGC+TGG | - | chr7.1:3436557-3436576 | None:intergenic | 55.0% | |
| AGCTCCCCTTGGACAGAACA+CGG | + | chr7.1:3437411-3437430 | MS.gene050916:CDS | 55.0% | |
| CAGGGGATCGATCTCAAAGC+TGG | + | chr7.1:3435632-3435651 | MS.gene050916:intron | 55.0% | |
| CCTTACGGCCTCATAGAGCT+GGG | - | chr7.1:3435864-3435883 | None:intergenic | 55.0% | |
| CCTTCCGGTCTCATAGAGCT+GGG | - | chr7.1:3436556-3436575 | None:intergenic | 55.0% | |
| CTACCTCAAGCTCCTCGTCA+AGG | + | chr7.1:3435703-3435722 | MS.gene050916:CDS | 55.0% | |
| GCAAGAATAGAGAAGGCGGG+TGG | + | chr7.1:3437355-3437374 | MS.gene050916:CDS | 55.0% | |
| GGGATCGATCTCAAAGCTGG+GGG | + | chr7.1:3435635-3435654 | MS.gene050916:CDS | 55.0% | |
| GGGGATCGATCTCAAAGCTG+GGG | + | chr7.1:3435634-3435653 | MS.gene050916:intron | 55.0% | |
| GTGCCGTCTCTGTGAACCTA+AGG | - | chr7.1:3437333-3437352 | None:intergenic | 55.0% | |
| TCTATGAGACCGGAAGGTCC+AGG | + | chr7.1:3436559-3436578 | MS.gene050916:intron | 55.0% | |
| TCTATGAGGCCGTAAGGCCA+AGG | + | chr7.1:3435867-3435886 | MS.gene050916:intron | 55.0% | |
| TCTGTCCAAGGGGAGCTCTA+AGG | - | chr7.1:3437408-3437427 | None:intergenic | 55.0% | |
| ! | CTGTCCAAGGGGAGCTCTAA+GGG | - | chr7.1:3437407-3437426 | None:intergenic | 55.0% |
| CCCAGCTCTATGAGACCGGA+AGG | + | chr7.1:3436553-3436572 | MS.gene050916:intron | 60.0% | |
| CCCAGCTCTATGAGGCCGTA+AGG | + | chr7.1:3435861-3435880 | MS.gene050916:intron | 60.0% | |
| CTTGCCCTTAGAGCTCCCCT+TGG | + | chr7.1:3437400-3437419 | MS.gene050916:CDS | 60.0% | |
| GAATGGCTGTGTGGCACACC+AGG | - | chr7.1:3437905-3437924 | None:intergenic | 60.0% | |
| GCCTTACGGCCTCATAGAGC+TGG | - | chr7.1:3435865-3435884 | None:intergenic | 60.0% | |
| GGACCTTGACGAGGAGCTTG+AGG | - | chr7.1:3435709-3435728 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 3435528 | 3438072 | 3435528 | ID=MS.gene050916 |
| chr7.1 | mRNA | 3435528 | 3438072 | 3435528 | ID=MS.gene050916.t1;Parent=MS.gene050916 |
| chr7.1 | exon | 3435528 | 3435530 | 3435528 | ID=MS.gene050916.t1.exon1;Parent=MS.gene050916.t1 |
| chr7.1 | CDS | 3435528 | 3435530 | 3435528 | ID=cds.MS.gene050916.t1;Parent=MS.gene050916.t1 |
| chr7.1 | exon | 3435635 | 3435724 | 3435635 | ID=MS.gene050916.t1.exon2;Parent=MS.gene050916.t1 |
| chr7.1 | CDS | 3435635 | 3435724 | 3435635 | ID=cds.MS.gene050916.t1;Parent=MS.gene050916.t1 |
| chr7.1 | exon | 3437011 | 3437139 | 3437011 | ID=MS.gene050916.t1.exon3;Parent=MS.gene050916.t1 |
| chr7.1 | CDS | 3437011 | 3437139 | 3437011 | ID=cds.MS.gene050916.t1;Parent=MS.gene050916.t1 |
| chr7.1 | exon | 3437250 | 3437432 | 3437250 | ID=MS.gene050916.t1.exon4;Parent=MS.gene050916.t1 |
| chr7.1 | CDS | 3437250 | 3437432 | 3437250 | ID=cds.MS.gene050916.t1;Parent=MS.gene050916.t1 |
| chr7.1 | exon | 3437845 | 3437934 | 3437845 | ID=MS.gene050916.t1.exon5;Parent=MS.gene050916.t1 |
| chr7.1 | CDS | 3437845 | 3437934 | 3437845 | ID=cds.MS.gene050916.t1;Parent=MS.gene050916.t1 |
| chr7.1 | exon | 3438067 | 3438072 | 3438067 | ID=MS.gene050916.t1.exon6;Parent=MS.gene050916.t1 |
| chr7.1 | CDS | 3438067 | 3438072 | 3438067 | ID=cds.MS.gene050916.t1;Parent=MS.gene050916.t1 |
| Gene Sequence |
| Protein sequence |
