Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92396.t1 | XP_003627756.1 | 92.1 | 432 | 30 | 2 | 1 | 429 | 1 | 431 | 2.60E-235 | 824.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92396.t1 | A8MRX0 | 52.7 | 425 | 192 | 4 | 2 | 418 | 11 | 434 | 4.3e-130 | 466.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92396.t1 | G7LEJ7 | 92.1 | 432 | 30 | 2 | 1 | 429 | 1 | 431 | 1.9e-235 | 824.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04986 | MS.gene92396 | 0.831486 | 1.62E-55 | -1.69E-46 |
| MS.gene052570 | MS.gene92396 | 0.805364 | 1.38E-49 | -1.69E-46 |
| MS.gene055204 | MS.gene92396 | 0.823633 | 1.25E-53 | -1.69E-46 |
| MS.gene055942 | MS.gene92396 | 0.800548 | 1.37E-48 | -1.69E-46 |
| MS.gene056185 | MS.gene92396 | 0.929404 | 7.29E-93 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92396.t1 | MTR_8g037910 | 92.130 | 432 | 30 | 2 | 1 | 429 | 1 | 431 | 0.0 | 827 |
| MS.gene92396.t1 | MTR_8g037880 | 84.722 | 432 | 63 | 1 | 1 | 429 | 1 | 432 | 0.0 | 766 |
| MS.gene92396.t1 | MTR_8g037910 | 93.375 | 317 | 20 | 1 | 1 | 317 | 1 | 316 | 0.0 | 613 |
| MS.gene92396.t1 | MTR_8g037910 | 92.674 | 273 | 19 | 1 | 1 | 273 | 1 | 272 | 0.0 | 525 |
| MS.gene92396.t1 | MTR_5g012130 | 51.508 | 431 | 196 | 5 | 4 | 424 | 13 | 440 | 1.79e-149 | 432 |
| MS.gene92396.t1 | MTR_5g012130 | 54.403 | 318 | 142 | 2 | 4 | 318 | 33 | 350 | 1.05e-116 | 345 |
| MS.gene92396.t1 | MTR_3g437580 | 41.435 | 432 | 228 | 10 | 4 | 417 | 13 | 437 | 1.68e-109 | 330 |
| MS.gene92396.t1 | MTR_3g437580 | 43.385 | 325 | 169 | 6 | 4 | 314 | 13 | 336 | 1.58e-88 | 273 |
| MS.gene92396.t1 | MTR_5g012130 | 50.403 | 248 | 120 | 2 | 4 | 248 | 33 | 280 | 2.16e-75 | 237 |
| MS.gene92396.t1 | MTR_3g109520 | 29.048 | 210 | 120 | 6 | 6 | 212 | 41 | 224 | 1.97e-17 | 84.3 |
| MS.gene92396.t1 | MTR_2g450510 | 27.273 | 253 | 127 | 8 | 3 | 222 | 4 | 232 | 3.73e-16 | 80.9 |
| MS.gene92396.t1 | MTR_7g107710 | 22.776 | 281 | 177 | 5 | 4 | 279 | 6 | 251 | 1.07e-15 | 78.6 |
| MS.gene92396.t1 | MTR_2g450310 | 27.273 | 253 | 127 | 8 | 3 | 222 | 4 | 232 | 1.28e-15 | 79.0 |
| MS.gene92396.t1 | MTR_1g011630 | 24.519 | 208 | 128 | 6 | 6 | 212 | 18 | 197 | 1.60e-14 | 75.5 |
| MS.gene92396.t1 | MTR_7g107690 | 25.000 | 236 | 142 | 6 | 3 | 231 | 7 | 214 | 7.58e-14 | 73.2 |
| MS.gene92396.t1 | MTR_2g044140 | 27.885 | 208 | 99 | 7 | 3 | 184 | 13 | 195 | 2.11e-13 | 72.4 |
| MS.gene92396.t1 | MTR_1g008380 | 25.837 | 209 | 127 | 6 | 6 | 212 | 44 | 226 | 3.20e-12 | 68.6 |
| MS.gene92396.t1 | MTR_5g033260 | 24.286 | 210 | 132 | 5 | 4 | 211 | 6 | 190 | 3.82e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92396.t1 | AT1G62620 | 52.706 | 425 | 191 | 4 | 4 | 418 | 13 | 437 | 1.80e-157 | 452 |
| MS.gene92396.t1 | AT1G63370 | 52.235 | 425 | 193 | 4 | 4 | 418 | 13 | 437 | 8.81e-156 | 448 |
| MS.gene92396.t1 | AT1G12140 | 52.706 | 425 | 192 | 4 | 2 | 418 | 11 | 434 | 1.20e-153 | 443 |
| MS.gene92396.t1 | AT1G12140 | 52.706 | 425 | 192 | 4 | 2 | 418 | 11 | 434 | 1.20e-153 | 443 |
| MS.gene92396.t1 | AT1G12200 | 52.693 | 427 | 190 | 4 | 4 | 418 | 14 | 440 | 3.46e-152 | 439 |
| MS.gene92396.t1 | AT1G12140 | 52.471 | 425 | 191 | 5 | 2 | 418 | 11 | 432 | 1.51e-150 | 435 |
| MS.gene92396.t1 | AT1G62600 | 51.288 | 427 | 196 | 4 | 4 | 418 | 13 | 439 | 2.13e-148 | 429 |
| MS.gene92396.t1 | AT1G12160 | 49.203 | 439 | 195 | 7 | 4 | 417 | 12 | 447 | 5.29e-147 | 426 |
| MS.gene92396.t1 | AT1G62620 | 55.200 | 375 | 161 | 3 | 4 | 371 | 13 | 387 | 5.31e-146 | 421 |
| MS.gene92396.t1 | AT1G62580 | 52.235 | 425 | 192 | 5 | 4 | 418 | 14 | 437 | 1.07e-144 | 421 |
| MS.gene92396.t1 | AT1G62560 | 48.349 | 424 | 207 | 5 | 4 | 417 | 13 | 434 | 1.17e-144 | 420 |
| MS.gene92396.t1 | AT1G65860 | 49.289 | 422 | 205 | 5 | 4 | 417 | 13 | 433 | 6.94e-144 | 418 |
| MS.gene92396.t1 | AT1G12130 | 50.562 | 445 | 192 | 7 | 4 | 424 | 13 | 453 | 9.15e-144 | 418 |
| MS.gene92396.t1 | AT1G62540 | 50.711 | 422 | 199 | 5 | 4 | 417 | 13 | 433 | 7.64e-142 | 413 |
| MS.gene92396.t1 | AT1G62570 | 49.764 | 424 | 200 | 6 | 4 | 417 | 13 | 433 | 1.30e-138 | 405 |
| MS.gene92396.t1 | AT1G62540 | 48.546 | 447 | 196 | 7 | 4 | 417 | 13 | 458 | 3.70e-138 | 404 |
| MS.gene92396.t1 | AT1G62580 | 48.690 | 458 | 191 | 8 | 4 | 418 | 14 | 470 | 1.31e-137 | 404 |
| MS.gene92396.t1 | AT1G62600 | 53.316 | 377 | 167 | 3 | 4 | 371 | 13 | 389 | 1.24e-136 | 397 |
| MS.gene92396.t1 | AT1G62560 | 50.660 | 379 | 178 | 4 | 4 | 375 | 13 | 389 | 5.69e-136 | 396 |
| MS.gene92396.t1 | AT1G62540 | 48.578 | 422 | 190 | 7 | 4 | 417 | 13 | 415 | 7.47e-131 | 384 |
| MS.gene92396.t1 | AT1G63340 | 47.518 | 423 | 175 | 5 | 4 | 418 | 14 | 397 | 1.18e-129 | 380 |
| MS.gene92396.t1 | AT1G63370 | 55.728 | 323 | 136 | 3 | 4 | 319 | 13 | 335 | 3.00e-125 | 366 |
| MS.gene92396.t1 | AT5G61290 | 44.573 | 433 | 214 | 7 | 4 | 417 | 16 | 441 | 3.36e-120 | 358 |
| MS.gene92396.t1 | AT1G12200 | 55.590 | 322 | 135 | 2 | 4 | 317 | 14 | 335 | 3.13e-119 | 353 |
| MS.gene92396.t1 | AT5G07800 | 42.299 | 435 | 225 | 9 | 3 | 417 | 15 | 443 | 3.44e-112 | 337 |
| MS.gene92396.t1 | AT1G62580 | 54.079 | 331 | 135 | 3 | 4 | 317 | 14 | 344 | 7.34e-111 | 330 |
| MS.gene92396.t1 | AT1G63390 | 58.042 | 143 | 53 | 2 | 4 | 139 | 13 | 155 | 1.31e-42 | 148 |
| MS.gene92396.t1 | AT5G45180 | 25.000 | 480 | 236 | 22 | 3 | 390 | 12 | 459 | 6.56e-20 | 92.0 |
| MS.gene92396.t1 | AT1G19250 | 29.461 | 241 | 115 | 8 | 3 | 212 | 12 | 228 | 9.02e-17 | 82.8 |
| MS.gene92396.t1 | AT4G13260 | 22.967 | 209 | 134 | 5 | 6 | 212 | 30 | 213 | 1.40e-12 | 68.6 |
| MS.gene92396.t1 | AT4G13260 | 22.967 | 209 | 134 | 5 | 6 | 212 | 30 | 213 | 3.31e-12 | 68.2 |
| MS.gene92396.t1 | AT5G11320 | 23.188 | 207 | 130 | 5 | 6 | 212 | 19 | 196 | 5.55e-12 | 67.4 |
| MS.gene92396.t1 | AT5G11320 | 23.188 | 207 | 130 | 5 | 6 | 212 | 19 | 196 | 1.37e-11 | 66.2 |
| MS.gene92396.t1 | AT5G25620 | 23.364 | 214 | 137 | 5 | 6 | 217 | 34 | 222 | 4.87e-11 | 64.7 |
| MS.gene92396.t1 | AT5G25620 | 23.364 | 214 | 137 | 5 | 6 | 217 | 34 | 222 | 6.06e-11 | 64.3 |
Find 118 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTACAGGTTGTGATCTTAAT+TGG | 0.129363 | 8.4:+60347865 | MS.gene92396:intron |
| CCGAGACTTGCTTTGGTTCC+TGG | 0.187863 | 8.4:+60347133 | MS.gene92396:CDS |
| CTGTGATCCGAGAACGTTTC+CGG | 0.221154 | 8.4:+60346913 | MS.gene92396:CDS |
| TCATTCCATACGGCCGTTTC+AGG | 0.244774 | 8.4:+60348725 | MS.gene92396:CDS |
| GCTCCATGGCTCTCTTTCAT+TGG | 0.284807 | 8.4:+60348446 | MS.gene92396:CDS |
| AGAGGAAAGGAGGGAAGGAC+TGG | 0.304169 | 8.4:+60347029 | MS.gene92396:CDS |
| ATTCCTTTCCTCGAAACTAA+TGG | 0.337402 | 8.4:+60348359 | MS.gene92396:CDS |
| GGTTGCCTCCGTTAGAAGAT+TGG | 0.375234 | 8.4:+60349857 | MS.gene92396:CDS |
| AACTTCATACCCTTCAATAG+TGG | 0.379745 | 8.4:-60347967 | None:intergenic |
| ATGACTGGGATGATAACTAT+TGG | 0.380916 | 8.4:+60349932 | MS.gene92396:CDS |
| CTGTGAACTGTTTCTCTGGT+TGG | 0.381244 | 8.4:-60346809 | None:intergenic |
| GAAGCGGTTATTGTGTGTTC+AGG | 0.389205 | 8.4:+60347097 | MS.gene92396:CDS |
| ATACCCTTCAATAGTGGATT+CGG | 0.390856 | 8.4:-60347961 | None:intergenic |
| TGTGAACTGTTTCTCTGGTT+GGG | 0.399952 | 8.4:-60346808 | None:intergenic |
| TGTGATCCGAGAACGTTTCC+GGG | 0.400644 | 8.4:+60346914 | MS.gene92396:CDS |
| TCATGACCCGGAAACGTTCT+CGG | 0.402567 | 8.4:-60346920 | None:intergenic |
| TGTGGAACCGAGACTTGCTT+TGG | 0.402751 | 8.4:+60347126 | MS.gene92396:CDS |
| TCACTACCTCCGCTTCAAAT+CGG | 0.403777 | 8.4:-60347000 | None:intergenic |
| CACTACCTCCGCTTCAAATC+GGG | 0.403988 | 8.4:-60346999 | None:intergenic |
| GGCGATGAGGCCGGAGACTC+CGG | 0.404278 | 8.4:-60346672 | None:intergenic |
| CAATGGCTAGCGGCACAGAT+TGG | 0.414104 | 8.4:+60349835 | MS.gene92396:CDS |
| GCCTTCCTGTTGTAGCTCCT+TGG | 0.421074 | 8.4:-60346696 | None:intergenic |
| CCTGGTGTTGAAAACTTTCG+TGG | 0.421107 | 8.4:+60347151 | MS.gene92396:CDS |
| TTCCTCCTTCGCTGGCTCCA+TGG | 0.424941 | 8.4:+60348432 | MS.gene92396:CDS |
| GACATCTCAAAAGATATTGC+AGG | 0.428767 | 8.4:+60347907 | MS.gene92396:CDS |
| TACAGGTTGTGATCTTAATT+GGG | 0.433986 | 8.4:+60347866 | MS.gene92396:intron |
| AAATCTTCCAAGGCAAATCA+TGG | 0.439066 | 8.4:+60346856 | MS.gene92396:CDS |
| ATTAAATGTGTATATGAAGA+TGG | 0.442499 | 8.4:+60348139 | MS.gene92396:CDS |
| GAGGAAAGGAGGGAAGGACT+GGG | 0.443036 | 8.4:+60347030 | MS.gene92396:CDS |
| TTACTATTCCATTAGTTTCG+AGG | 0.445234 | 8.4:-60348367 | None:intergenic |
| GTGATCGGCGCCGGAGTCTC+CGG | 0.449086 | 8.4:+60346662 | MS.gene92396:CDS |
| GATGCAATAATTCACTGTAC+AGG | 0.451805 | 8.4:+60348199 | MS.gene92396:CDS |
| GGCTTGGTTGCCTTTGAAGA+TGG | 0.455524 | 8.4:+60348160 | MS.gene92396:CDS |
| CGCCGCCAAGGAGCTACAAC+AGG | 0.458403 | 8.4:+60346691 | MS.gene92396:CDS |
| ACTGCTGTGAACTGTTTCTC+TGG | 0.461299 | 8.4:-60346813 | None:intergenic |
| TGAAAGTTGAGAGGAAAGGA+GGG | 0.461708 | 8.4:+60347020 | MS.gene92396:CDS |
| ACCTACTGAAGAAGAAATGA+TGG | 0.467935 | 8.4:+60348644 | MS.gene92396:CDS |
| AGGATTCTCGCTTGGACAAA+GGG | 0.470355 | 8.4:-60346892 | None:intergenic |
| CGGATCACAGGATTCTCGCT+TGG | 0.472811 | 8.4:-60346900 | None:intergenic |
| AAGAATCCCATGATTTGCCT+TGG | 0.478861 | 8.4:-60346863 | None:intergenic |
| ATGGTTAAAGTTGCAGTGAT+CGG | 0.483813 | 8.4:+60346647 | MS.gene92396:CDS |
| AATGGCTAGCGGCACAGATT+GGG | 0.485605 | 8.4:+60349836 | MS.gene92396:CDS |
| CAGGATTCTCGCTTGGACAA+AGG | 0.488933 | 8.4:-60346893 | None:intergenic |
| GAGAAGAACAACCGCGTTGG+AGG | 0.491903 | 8.4:+60346737 | MS.gene92396:CDS |
| TTGGATGGACAATATGTTGA+TGG | 0.492691 | 8.4:+60349876 | MS.gene92396:CDS |
| GTGAAAGTTGAGAGGAAAGG+AGG | 0.493392 | 8.4:+60347019 | MS.gene92396:CDS |
| ACTATTGAAGGGTATGAAGT+TGG | 0.493692 | 8.4:+60347969 | MS.gene92396:CDS |
| GCTGGTGAGTTTGGGATACA+CGG | 0.497630 | 8.4:+60346971 | MS.gene92396:CDS |
| CTCCTTGGCGGCGATGAGGC+CGG | 0.501222 | 8.4:-60346681 | None:intergenic |
| ATTCCATTAGTTTCGAGGAA+AGG | 0.505621 | 8.4:-60348362 | None:intergenic |
| TAAAGACATATATCGCATCT+TGG | 0.506300 | 8.4:+60348674 | MS.gene92396:CDS |
| AGCTGATTCATTCTGAATGA+TGG | 0.509144 | 8.4:-60349959 | None:intergenic |
| GGACTGGGTGGTTGAGTCAA+GGG | 0.513168 | 8.4:+60347045 | MS.gene92396:CDS |
| ACAAACGCAAATACCTGAAA+CGG | 0.515007 | 8.4:-60348738 | None:intergenic |
| TGACTGGGATGATAACTATT+GGG | 0.515543 | 8.4:+60349933 | MS.gene92396:CDS |
| ATGGAATGAGTGTAACGCTT+GGG | 0.516942 | 8.4:-60348711 | None:intergenic |
| CGAAGCATTTCTTCATGACC+CGG | 0.517432 | 8.4:-60346932 | None:intergenic |
| AGCCATGGAGCCAGCGAAGG+AGG | 0.524115 | 8.4:-60348434 | None:intergenic |
| AGTTGAGAGGAAAGGAGGGA+AGG | 0.527409 | 8.4:+60347024 | MS.gene92396:CDS |
| CTCCGGCCTCATCGCCGCCA+AGG | 0.529871 | 8.4:+60346679 | MS.gene92396:CDS |
| AGGACTGGGTGGTTGAGTCA+AGG | 0.531264 | 8.4:+60347044 | MS.gene92396:CDS |
| TCCTCACTCTTTCAAAGACC+AGG | 0.534154 | 8.4:+60347204 | MS.gene92396:CDS |
| TTTGAGATGTCAAATGAACT+AGG | 0.538090 | 8.4:-60347895 | None:intergenic |
| TTCCTGTTGTAGCTCCTTGG+CGG | 0.540823 | 8.4:-60346693 | None:intergenic |
| CGATTGAAGATAATCGCGTT+GGG | 0.546471 | 8.4:+60348390 | MS.gene92396:CDS |
| CGGAAACGTTCTCGGATCAC+AGG | 0.547744 | 8.4:-60346912 | None:intergenic |
| AATCTTACCAGATAAAACTC+TGG | 0.548944 | 8.4:-60348616 | None:intergenic |
| TAAAACTCTGGCAACCCACT+TGG | 0.550687 | 8.4:-60348604 | None:intergenic |
| TCTCGAAAACGACGACGTTG+TGG | 0.551159 | 8.4:-60346718 | None:intergenic |
| AAATACCTGAAACGGCCGTA+TGG | 0.552669 | 8.4:-60348730 | None:intergenic |
| CGGAGGTAGTGAAAGTTGAG+AGG | 0.553936 | 8.4:+60347011 | MS.gene92396:CDS |
| ACAACCGCGTTGGAGGAACC+TGG | 0.554708 | 8.4:+60346744 | MS.gene92396:CDS |
| ATGAAATGTATAGAGATGAC+TGG | 0.555017 | 8.4:+60349917 | MS.gene92396:CDS |
| TCCATCATTTCTTCTTCAGT+AGG | 0.556672 | 8.4:-60348645 | None:intergenic |
| GTTGTGATCTTAATTGGGCT+AGG | 0.557914 | 8.4:+60347871 | MS.gene92396:CDS |
| ACGATTGAAGATAATCGCGT+TGG | 0.558753 | 8.4:+60348389 | MS.gene92396:CDS |
| AAAGTTGCAGTGATCGGCGC+CGG | 0.565896 | 8.4:+60346653 | MS.gene92396:CDS |
| AGTAGAGAATCCATCTTCAA+AGG | 0.568751 | 8.4:-60348170 | None:intergenic |
| CTTTACGCACAAATCTTCCA+AGG | 0.568859 | 8.4:+60346846 | MS.gene92396:CDS |
| TTCGAGAAGAACAACCGCGT+TGG | 0.570371 | 8.4:+60346734 | MS.gene92396:CDS |
| AAAACCGAATCCACTATTGA+AGG | 0.571520 | 8.4:+60347957 | MS.gene92396:CDS |
| GAGAGCCATGGAGCCAGCGA+AGG | 0.571530 | 8.4:-60348437 | None:intergenic |
| GTAGCTCCTTGGCGGCGATG+AGG | 0.577088 | 8.4:-60346685 | None:intergenic |
| GCCTCCGTTAGAAGATTGGA+TGG | 0.580895 | 8.4:+60349861 | MS.gene92396:CDS |
| GAAAGGAGGGAAGGACTGGG+TGG | 0.585335 | 8.4:+60347033 | MS.gene92396:CDS |
| AATCTTCCAAGGCAAATCAT+GGG | 0.585719 | 8.4:+60346857 | MS.gene92396:CDS |
| AGATATTGCAGGAGTTGCAA+AGG | 0.586378 | 8.4:+60347918 | MS.gene92396:CDS |
| AAACCGAATCCACTATTGAA+GGG | 0.595030 | 8.4:+60347958 | MS.gene92396:CDS |
| TATGGAATGAGTGTAACGCT+TGG | 0.596759 | 8.4:-60348712 | None:intergenic |
| CTGGTTGGGTCTATACTAAG+AGG | 0.600004 | 8.4:-60346794 | None:intergenic |
| GCCAAGGAGCTACAACAGGA+AGG | 0.605200 | 8.4:+60346695 | MS.gene92396:CDS |
| GAAGATTTGTGCGTAAAGAG+TGG | 0.607471 | 8.4:-60346841 | None:intergenic |
| TGGGTCTATACTAAGAGGAT+CGG | 0.608316 | 8.4:-60346789 | None:intergenic |
| ATGTGTATATGAAGATGGCT+TGG | 0.608479 | 8.4:+60348144 | MS.gene92396:CDS |
| CGGGTTGACCCGATTTGAAG+CGG | 0.611462 | 8.4:+60346991 | MS.gene92396:CDS |
| CTGGTGAGTTTGGGATACAC+GGG | 0.612264 | 8.4:+60346972 | MS.gene92396:CDS |
| TTGTCCATCCAATCTTCTAA+CGG | 0.613321 | 8.4:-60349865 | None:intergenic |
| GTAGTGAAAGTTGAGAGGAA+AGG | 0.614071 | 8.4:+60347016 | MS.gene92396:CDS |
| CCAGGAACCAAAGCAAGTCT+CGG | 0.614201 | 8.4:-60347133 | None:intergenic |
| GACTGGGTGGTTGAGTCAAG+GGG | 0.614863 | 8.4:+60347046 | MS.gene92396:CDS |
| ATGCAATAATTCACTGTACA+GGG | 0.617168 | 8.4:+60348200 | MS.gene92396:CDS |
| AATTGAGTTACAAGCCAAGT+GGG | 0.620693 | 8.4:+60348590 | MS.gene92396:CDS |
| GGTATGAAGTTGGAAAATGC+TGG | 0.621768 | 8.4:+60347979 | MS.gene92396:CDS |
| TAGTTTCGAGGAAAGGAATG+TGG | 0.628193 | 8.4:-60348355 | None:intergenic |
| GAGTCAAGAAGTGTTTGAAG+CGG | 0.628510 | 8.4:+60347081 | MS.gene92396:CDS |
| CAATATATGTTTCCATACTG+TGG | 0.630725 | 8.4:+60348002 | MS.gene92396:CDS |
| AGCGTTACACTCATTCCATA+CGG | 0.631523 | 8.4:+60348715 | MS.gene92396:CDS |
| ACCTGGTCTTTGAAAGAGTG+AGG | 0.636343 | 8.4:-60347205 | None:intergenic |
| AAACCAATGAAAGAGAGCCA+TGG | 0.638563 | 8.4:-60348449 | None:intergenic |
| TGGGTGGTTGAGTCAAGGGG+AGG | 0.650559 | 8.4:+60347049 | MS.gene92396:CDS |
| TGAAATGTATAGAGATGACT+GGG | 0.657076 | 8.4:+60349918 | MS.gene92396:CDS |
| TAATTGAGTTACAAGCCAAG+TGG | 0.658830 | 8.4:+60348589 | MS.gene92396:CDS |
| TCCATCCAATCTTCTAACGG+AGG | 0.663161 | 8.4:-60349862 | None:intergenic |
| AGACATATATCGCATCTTGG+AGG | 0.672722 | 8.4:+60348677 | MS.gene92396:CDS |
| GTTGACCCGATTTGAAGCGG+AGG | 0.673696 | 8.4:+60346994 | MS.gene92396:CDS |
| GTCAGGCAGACTACAAACAA+TGG | 0.685991 | 8.4:+60349818 | MS.gene92396:intron |
| AGACTACAAACAATGGCTAG+CGG | 0.716988 | 8.4:+60349825 | MS.gene92396:CDS |
| ATATCCAGGTTCCTCCAACG+CGG | 0.760535 | 8.4:-60346748 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAATTTCCAAATAAAAT+AGG | - | chr8.4:60347832-60347851 | None:intergenic | 10.0% |
| !!! | AAATATTTAGATTTAGATTT+TGG | + | chr8.4:60347338-60347357 | MS.gene92396:intron | 10.0% |
| !!! | ATTTAATAAGTTGAAATTAT+TGG | + | chr8.4:60347267-60347286 | MS.gene92396:intron | 10.0% |
| !!! | ATTTTATTTGGAAATTTAAT+TGG | + | chr8.4:60347832-60347851 | MS.gene92396:intron | 10.0% |
| !! | AATATCTATCATATAAAGTA+TGG | - | chr8.4:60348065-60348084 | None:intergenic | 15.0% |
| !! | ATATAAACAAATATTGTAAC+AGG | + | chr8.4:60348324-60348343 | MS.gene92396:intron | 15.0% |
| !!! | ATTTTCCAAATTTGAAAAAA+TGG | + | chr8.4:60347235-60347254 | MS.gene92396:intron | 15.0% |
| !!! | TAAAACCATTTTTTCAAATT+TGG | - | chr8.4:60347243-60347262 | None:intergenic | 15.0% |
| !! | AATATTGTACAATTTAATCC+AGG | + | chr8.4:60347376-60347395 | MS.gene92396:intron | 20.0% |
| !! | ATTAAATGTGTATATGAAGA+TGG | + | chr8.4:60348139-60348158 | MS.gene92396:CDS | 20.0% |
| !! | TAAAAGAAAAAATACGTTGA+AGG | - | chr8.4:60348252-60348271 | None:intergenic | 20.0% |
| !! | TACAAGTAAATAGTTAAACT+CGG | - | chr8.4:60349788-60349807 | None:intergenic | 20.0% |
| !!! | AATCTCTAGATTTTACAAAT+TGG | - | chr8.4:60349689-60349708 | None:intergenic | 20.0% |
| !!! | AGAAGAAAGTTCATTATTTT+TGG | + | chr8.4:60347558-60347577 | MS.gene92396:intron | 20.0% |
| !!! | ATAAAATGCTAATTTGCTTA+TGG | - | chr8.4:60349531-60349550 | None:intergenic | 20.0% |
| !!! | ATTAAGATGAAGTATTTCAA+TGG | + | chr8.4:60347295-60347314 | MS.gene92396:intron | 20.0% |
| !!! | CTAAGAAATTAATCATTTTG+AGG | + | chr8.4:60348300-60348319 | MS.gene92396:intron | 20.0% |
| !!! | TGTTTAATGCCTATTTTATT+TGG | + | chr8.4:60347820-60347839 | MS.gene92396:intron | 20.0% |
| ! | AACTCGGAAGAATTTATAAT+CGG | - | chr8.4:60349772-60349791 | None:intergenic | 25.0% |
| ! | ATCGTTAAAATTATAAGCAC+CGG | - | chr8.4:60349719-60349738 | None:intergenic | 25.0% |
| ! | TGGAGATATTTATTATGAGA+CGG | - | chr8.4:60348045-60348064 | None:intergenic | 25.0% |
| ! | TTAAGCATTTCTCTAAACAA+TGG | + | chr8.4:60348899-60348918 | MS.gene92396:intron | 25.0% |
| ! | TTACAATAGAAATAGTTTCC+TGG | - | chr8.4:60348572-60348591 | None:intergenic | 25.0% |
| !! | ATTTTTAACATACCACAGTA+TGG | - | chr8.4:60348017-60348036 | None:intergenic | 25.0% |
| !! | CACATCTATATGTTTTCATA+GGG | + | chr8.4:60349173-60349192 | MS.gene92396:intron | 25.0% |
| !! | GGATAATTTTGCTCAATTAA+CGG | + | chr8.4:60348787-60348806 | MS.gene92396:intron | 25.0% |
| !! | TATTTGTGAGTTGAATTTGA+GGG | + | chr8.4:60349010-60349029 | MS.gene92396:intron | 25.0% |
| !! | TCATCTGAAATTGTATGTAA+TGG | + | chr8.4:60348964-60348983 | MS.gene92396:intron | 25.0% |
| !!! | AATTGTGTTTTTGTTTGAGT+CGG | + | chr8.4:60347711-60347730 | MS.gene92396:intron | 25.0% |
| !!! | GTTACTAGAGAATGTTTTAA+AGG | + | chr8.4:60349632-60349651 | MS.gene92396:intron | 25.0% |
| !!! | TCAATTAACGGATTTAAGAT+AGG | + | chr8.4:60348799-60348818 | MS.gene92396:intron | 25.0% |
| !!! | TTATGTCATGTTTTTTCTAG+AGG | + | chr8.4:60349435-60349454 | MS.gene92396:intron | 25.0% |
| AAATTAGTTCCTTATAGAGC+TGG | - | chr8.4:60349404-60349423 | None:intergenic | 30.0% | |
| AATCTTACCAGATAAAACTC+TGG | - | chr8.4:60348619-60348638 | None:intergenic | 30.0% | |
| ACTAGTACTAACACATTTGT+TGG | + | chr8.4:60347502-60347521 | MS.gene92396:intron | 30.0% | |
| ACTAGTAGAGTCAACAAAAT+TGG | - | chr8.4:60347488-60347507 | None:intergenic | 30.0% | |
| ACTTGTAAAATTACTCTGTC+AGG | + | chr8.4:60349801-60349820 | MS.gene92396:intron | 30.0% | |
| AGACTAAAACGATTAACACA+TGG | - | chr8.4:60347408-60347427 | None:intergenic | 30.0% | |
| ATCCAATGAAATGTATAGTG+AGG | - | chr8.4:60348771-60348790 | None:intergenic | 30.0% | |
| ATGAAATGTATAGAGATGAC+TGG | + | chr8.4:60349917-60349936 | MS.gene92396:CDS | 30.0% | |
| ATGCAATAATTCACTGTACA+GGG | + | chr8.4:60348200-60348219 | MS.gene92396:CDS | 30.0% | |
| CAATATATGTTTCCATACTG+TGG | + | chr8.4:60348002-60348021 | MS.gene92396:CDS | 30.0% | |
| CAATGGATATTAATGCAAGT+AGG | + | chr8.4:60347312-60347331 | MS.gene92396:intron | 30.0% | |
| CCTATGAAAACATATAGATG+TGG | - | chr8.4:60349175-60349194 | None:intergenic | 30.0% | |
| GGAAAAACATGTTTGTATAG+TGG | - | chr8.4:60348416-60348435 | None:intergenic | 30.0% | |
| TAAAGACATATATCGCATCT+TGG | + | chr8.4:60348674-60348693 | MS.gene92396:CDS | 30.0% | |
| TACAGGTTGTGATCTTAATT+GGG | + | chr8.4:60347866-60347885 | MS.gene92396:intron | 30.0% | |
| TCAAAGATCAAAGTGACTAA+TGG | + | chr8.4:60347669-60347688 | MS.gene92396:intron | 30.0% | |
| TGAAATGTATAGAGATGACT+GGG | + | chr8.4:60349918-60349937 | MS.gene92396:CDS | 30.0% | |
| TGTATTAGAGAAAGACACAT+AGG | + | chr8.4:60347439-60347458 | MS.gene92396:intron | 30.0% | |
| TTTGGAAAATGTAATGTACC+TGG | - | chr8.4:60347225-60347244 | None:intergenic | 30.0% | |
| ! | AAGCATCGTTCAATTGTTAA+AGG | + | chr8.4:60348870-60348889 | MS.gene92396:intron | 30.0% |
| ! | AATGGAGACTTTTCGTTTAT+AGG | + | chr8.4:60348917-60348936 | MS.gene92396:intron | 30.0% |
| ! | AATTGGTAATTACTACCTAC+AGG | + | chr8.4:60347849-60347868 | MS.gene92396:intron | 30.0% |
| ! | ATATGTTTTCATAGGGAACT+AGG | + | chr8.4:60349180-60349199 | MS.gene92396:intron | 30.0% |
| ! | CCACATCTATATGTTTTCAT+AGG | + | chr8.4:60349172-60349191 | MS.gene92396:intron | 30.0% |
| ! | GAACTTCGAGTTAAAAAAAC+AGG | + | chr8.4:60349292-60349311 | MS.gene92396:intron | 30.0% |
| ! | GTATTTGTGAGTTGAATTTG+AGG | + | chr8.4:60349009-60349028 | MS.gene92396:intron | 30.0% |
| ! | TATGTTTTCATAGGGAACTA+GGG | + | chr8.4:60349181-60349200 | MS.gene92396:intron | 30.0% |
| ! | TTACTATTCCATTAGTTTCG+AGG | - | chr8.4:60348370-60348389 | None:intergenic | 30.0% |
| ! | TTTGAGATGTCAAATGAACT+AGG | - | chr8.4:60347898-60347917 | None:intergenic | 30.0% |
| !!! | AATCTAGAGATTGTTTTGAC+CGG | + | chr8.4:60349697-60349716 | MS.gene92396:intron | 30.0% |
| !!! | GTTTTTTCTAGAGGAAGTTT+AGG | + | chr8.4:60349444-60349463 | MS.gene92396:intron | 30.0% |
| !!! | TGAAGAAATGCTTCGTTTTT+TGG | + | chr8.4:60346940-60346959 | MS.gene92396:CDS | 30.0% |
| !!! | TTGAATTTGAGGGTTTTGAA+GGG | + | chr8.4:60349020-60349039 | MS.gene92396:intron | 30.0% |
| AAAACCGAATCCACTATTGA+AGG | + | chr8.4:60347957-60347976 | MS.gene92396:CDS | 35.0% | |
| AAACCGAATCCACTATTGAA+GGG | + | chr8.4:60347958-60347977 | MS.gene92396:CDS | 35.0% | |
| AAATCTTCCAAGGCAAATCA+TGG | + | chr8.4:60346856-60346875 | MS.gene92396:CDS | 35.0% | |
| AACTCACAAATACACCCTAA+GGG | - | chr8.4:60349002-60349021 | None:intergenic | 35.0% | |
| AACTTCATACCCTTCAATAG+TGG | - | chr8.4:60347970-60347989 | None:intergenic | 35.0% | |
| AATCTTCCAAGGCAAATCAT+GGG | + | chr8.4:60346857-60346876 | MS.gene92396:CDS | 35.0% | |
| AATTGAGTTACAAGCCAAGT+GGG | + | chr8.4:60348590-60348609 | MS.gene92396:CDS | 35.0% | |
| ACAAACGCAAATACCTGAAA+CGG | - | chr8.4:60348741-60348760 | None:intergenic | 35.0% | |
| ACCTACTGAAGAAGAAATGA+TGG | + | chr8.4:60348644-60348663 | MS.gene92396:CDS | 35.0% | |
| AGACTTCTGATGTGTTATCA+GGG | - | chr8.4:60347601-60347620 | None:intergenic | 35.0% | |
| AGTAGAGAATCCATCTTCAA+AGG | - | chr8.4:60348173-60348192 | None:intergenic | 35.0% | |
| ATGACTGGGATGATAACTAT+TGG | + | chr8.4:60349932-60349951 | MS.gene92396:CDS | 35.0% | |
| ATGGTTAAAGTTGCAGTGAT+CGG | + | chr8.4:60346647-60346666 | MS.gene92396:CDS | 35.0% | |
| ATGTGTATATGAAGATGGCT+TGG | + | chr8.4:60348144-60348163 | MS.gene92396:CDS | 35.0% | |
| ATTAACACATGGAACAATCC+TGG | - | chr8.4:60347397-60347416 | None:intergenic | 35.0% | |
| ATTAGAGAAAGACACATAGG+CGG | + | chr8.4:60347442-60347461 | MS.gene92396:intron | 35.0% | |
| ATTCCTTTCCTCGAAACTAA+TGG | + | chr8.4:60348359-60348378 | MS.gene92396:CDS | 35.0% | |
| CAATGACATTGCACATGTAT+TGG | + | chr8.4:60349126-60349145 | MS.gene92396:intron | 35.0% | |
| CAATTAAGATCACAACCTGT+AGG | - | chr8.4:60347867-60347886 | None:intergenic | 35.0% | |
| CTACAGGTTGTGATCTTAAT+TGG | + | chr8.4:60347865-60347884 | MS.gene92396:intron | 35.0% | |
| CTCCTCACTATACATTTCAT+TGG | + | chr8.4:60348766-60348785 | MS.gene92396:intron | 35.0% | |
| GAACCAACTCGATAATAGTT+CGG | + | chr8.4:60349217-60349236 | MS.gene92396:intron | 35.0% | |
| GAACTTTCTTCTCCTATGAA+TGG | - | chr8.4:60347550-60347569 | None:intergenic | 35.0% | |
| GACAATTAACTCGTTGAACT+TGG | + | chr8.4:60349250-60349269 | MS.gene92396:intron | 35.0% | |
| GACATCTCAAAAGATATTGC+AGG | + | chr8.4:60347907-60347926 | MS.gene92396:CDS | 35.0% | |
| GACTCTACTAAACCATTCAT+AGG | + | chr8.4:60347535-60347554 | MS.gene92396:intron | 35.0% | |
| GATGCAATAATTCACTGTAC+AGG | + | chr8.4:60348199-60348218 | MS.gene92396:CDS | 35.0% | |
| TAATTGAGTTACAAGCCAAG+TGG | + | chr8.4:60348589-60348608 | MS.gene92396:CDS | 35.0% | |
| TAGACTTCTGATGTGTTATC+AGG | - | chr8.4:60347602-60347621 | None:intergenic | 35.0% | |
| TCCATCATTTCTTCTTCAGT+AGG | - | chr8.4:60348648-60348667 | None:intergenic | 35.0% | |
| TGACTCGATAAGAATTGACT+CGG | - | chr8.4:60349347-60349366 | None:intergenic | 35.0% | |
| TGACTGGGATGATAACTATT+GGG | + | chr8.4:60349933-60349952 | MS.gene92396:CDS | 35.0% | |
| TGATGTGACACGTTAATATG+CGG | - | chr8.4:60349587-60349606 | None:intergenic | 35.0% | |
| TTGGATGGACAATATGTTGA+TGG | + | chr8.4:60349876-60349895 | MS.gene92396:CDS | 35.0% | |
| TTGTCCATCCAATCTTCTAA+CGG | - | chr8.4:60349868-60349887 | None:intergenic | 35.0% | |
| ! | ACTATTGAAGGGTATGAAGT+TGG | + | chr8.4:60347969-60347988 | MS.gene92396:CDS | 35.0% |
| ! | AGCTGATTCATTCTGAATGA+TGG | - | chr8.4:60349962-60349981 | None:intergenic | 35.0% |
| ! | ATTCCATTAGTTTCGAGGAA+AGG | - | chr8.4:60348365-60348384 | None:intergenic | 35.0% |
| ! | TATAGCGCAAACCATCATTT+TGG | - | chr8.4:60347771-60347790 | None:intergenic | 35.0% |
| !! | ATACCCTTCAATAGTGGATT+CGG | - | chr8.4:60347964-60347983 | None:intergenic | 35.0% |
| !! | GAACTATTATCGAGTTGGTT+CGG | - | chr8.4:60349218-60349237 | None:intergenic | 35.0% |
| !! | GTTGAATTTGAGGGTTTTGA+AGG | + | chr8.4:60349019-60349038 | MS.gene92396:intron | 35.0% |
| !! | TAATATTTCTAGACTTGCCG+TGG | + | chr8.4:60348546-60348565 | MS.gene92396:intron | 35.0% |
| !!! | AGAAATGCTTCGTTTTTTGG+AGG | + | chr8.4:60346943-60346962 | MS.gene92396:CDS | 35.0% |
| !!! | TGTTTTTGGAGTGTATATCC+AGG | - | chr8.4:60346765-60346784 | None:intergenic | 35.0% |
| AAACCAATGAAAGAGAGCCA+TGG | - | chr8.4:60348452-60348471 | None:intergenic | 40.0% | |
| AACTCGAAGTTCAGCTCATT+TGG | - | chr8.4:60349284-60349303 | None:intergenic | 40.0% | |
| ACGATTGAAGATAATCGCGT+TGG | + | chr8.4:60348389-60348408 | MS.gene92396:CDS | 40.0% | |
| ACTTCCAGAGACCAAAATGA+TGG | + | chr8.4:60347757-60347776 | MS.gene92396:intron | 40.0% | |
| AGACATATATCGCATCTTGG+AGG | + | chr8.4:60348677-60348696 | MS.gene92396:CDS | 40.0% | |
| AGACTACAAACAATGGCTAG+CGG | + | chr8.4:60349825-60349844 | MS.gene92396:CDS | 40.0% | |
| AGATATTGCAGGAGTTGCAA+AGG | + | chr8.4:60347918-60347937 | MS.gene92396:CDS | 40.0% | |
| AGCGTTACACTCATTCCATA+CGG | + | chr8.4:60348715-60348734 | MS.gene92396:CDS | 40.0% | |
| ATGGAATGAGTGTAACGCTT+GGG | - | chr8.4:60348714-60348733 | None:intergenic | 40.0% | |
| CAACTCACAAATACACCCTA+AGG | - | chr8.4:60349003-60349022 | None:intergenic | 40.0% | |
| CGATTGAAGATAATCGCGTT+GGG | + | chr8.4:60348390-60348409 | MS.gene92396:CDS | 40.0% | |
| CTTTACGCACAAATCTTCCA+AGG | + | chr8.4:60346846-60346865 | MS.gene92396:CDS | 40.0% | |
| GAAGATTTGTGCGTAAAGAG+TGG | - | chr8.4:60346844-60346863 | None:intergenic | 40.0% | |
| GACTCATTTCCAGCTCTATA+AGG | + | chr8.4:60349392-60349411 | MS.gene92396:intron | 40.0% | |
| GGTATGAAGTTGGAAAATGC+TGG | + | chr8.4:60347979-60347998 | MS.gene92396:CDS | 40.0% | |
| GGTCAAAATAGAGTCCCTTA+GGG | + | chr8.4:60348985-60349004 | MS.gene92396:intron | 40.0% | |
| GTAGTGAAAGTTGAGAGGAA+AGG | + | chr8.4:60347016-60347035 | MS.gene92396:CDS | 40.0% | |
| GTTCCGAACTATTATCGAGT+TGG | - | chr8.4:60349223-60349242 | None:intergenic | 40.0% | |
| GTTGTGATCTTAATTGGGCT+AGG | + | chr8.4:60347871-60347890 | MS.gene92396:CDS | 40.0% | |
| TAGAAATAGTTTCCTGGCCA+CGG | - | chr8.4:60348566-60348585 | None:intergenic | 40.0% | |
| TAGTTTCGAGGAAAGGAATG+TGG | - | chr8.4:60348358-60348377 | None:intergenic | 40.0% | |
| TATGGAATGAGTGTAACGCT+TGG | - | chr8.4:60348715-60348734 | None:intergenic | 40.0% | |
| TGAAAGTTGAGAGGAAAGGA+GGG | + | chr8.4:60347020-60347039 | MS.gene92396:CDS | 40.0% | |
| TGGGTCTATACTAAGAGGAT+CGG | - | chr8.4:60346792-60346811 | None:intergenic | 40.0% | |
| TGGTCAAAATAGAGTCCCTT+AGG | + | chr8.4:60348984-60349003 | MS.gene92396:intron | 40.0% | |
| ! | AAGAATCCCATGATTTGCCT+TGG | - | chr8.4:60346866-60346885 | None:intergenic | 40.0% |
| ! | AGGATTTTGCTGGTGAGTTT+GGG | + | chr8.4:60346963-60346982 | MS.gene92396:CDS | 40.0% |
| ! | TGTGAACTGTTTCTCTGGTT+GGG | - | chr8.4:60346811-60346830 | None:intergenic | 40.0% |
| !! | CAAACCATCATTTTGGTCTC+TGG | - | chr8.4:60347764-60347783 | None:intergenic | 40.0% |
| !! | GAGTCAAGAAGTGTTTGAAG+CGG | + | chr8.4:60347081-60347100 | MS.gene92396:CDS | 40.0% |
| !! | TGTGTGTTCAGGTCATTTTG+TGG | + | chr8.4:60347108-60347127 | MS.gene92396:CDS | 40.0% |
| !!! | CGTTTTTTGGAGGATTTTGC+TGG | + | chr8.4:60346953-60346972 | MS.gene92396:CDS | 40.0% |
| AAATACCTGAAACGGCCGTA+TGG | - | chr8.4:60348733-60348752 | None:intergenic | 45.0% | |
| AGGATTCTCGCTTGGACAAA+GGG | - | chr8.4:60346895-60346914 | None:intergenic | 45.0% | |
| CTGGTTGGGTCTATACTAAG+AGG | - | chr8.4:60346797-60346816 | None:intergenic | 45.0% | |
| GAAGCGGTTATTGTGTGTTC+AGG | + | chr8.4:60347097-60347116 | MS.gene92396:CDS | 45.0% | |
| GACGACGTGTACTAATGAGA+AGG | - | chr8.4:60347630-60347649 | None:intergenic | 45.0% | |
| GTCAGGCAGACTACAAACAA+TGG | + | chr8.4:60349818-60349837 | MS.gene92396:intron | 45.0% | |
| GTGAAAGTTGAGAGGAAAGG+AGG | + | chr8.4:60347019-60347038 | MS.gene92396:CDS | 45.0% | |
| TAAAACTCTGGCAACCCACT+TGG | - | chr8.4:60348607-60348626 | None:intergenic | 45.0% | |
| TCACTACCTCCGCTTCAAAT+CGG | - | chr8.4:60347003-60347022 | None:intergenic | 45.0% | |
| TCCATCCAATCTTCTAACGG+AGG | - | chr8.4:60349865-60349884 | None:intergenic | 45.0% | |
| TCCTCACTCTTTCAAAGACC+AGG | + | chr8.4:60347204-60347223 | MS.gene92396:CDS | 45.0% | |
| ! | ACATGTTTTTCCTCCTTCGC+TGG | + | chr8.4:60348424-60348443 | MS.gene92396:CDS | 45.0% |
| ! | ACCTGGTCTTTGAAAGAGTG+AGG | - | chr8.4:60347208-60347227 | None:intergenic | 45.0% |
| ! | ACTGCTGTGAACTGTTTCTC+TGG | - | chr8.4:60346816-60346835 | None:intergenic | 45.0% |
| ! | AGAGGATCGGAGTCTGTTTT+TGG | - | chr8.4:60346779-60346798 | None:intergenic | 45.0% |
| ! | CCACGAAAGTTTTCAACACC+AGG | - | chr8.4:60347154-60347173 | None:intergenic | 45.0% |
| ! | CCTGGTGTTGAAAACTTTCG+TGG | + | chr8.4:60347151-60347170 | MS.gene92396:CDS | 45.0% |
| ! | CGAAGCATTTCTTCATGACC+CGG | - | chr8.4:60346935-60346954 | None:intergenic | 45.0% |
| ! | CTGTGAACTGTTTCTCTGGT+TGG | - | chr8.4:60346812-60346831 | None:intergenic | 45.0% |
| ! | GAGGATTTTGCTGGTGAGTT+TGG | + | chr8.4:60346962-60346981 | MS.gene92396:CDS | 45.0% |
| !! | TGGGTTGCCAGAGTTTTATC+TGG | + | chr8.4:60348609-60348628 | MS.gene92396:CDS | 45.0% |
| AATGGCTAGCGGCACAGATT+GGG | + | chr8.4:60349836-60349855 | MS.gene92396:CDS | 50.0% | |
| AGTTGAGAGGAAAGGAGGGA+AGG | + | chr8.4:60347024-60347043 | MS.gene92396:CDS | 50.0% | |
| ATATCCAGGTTCCTCCAACG+CGG | - | chr8.4:60346751-60346770 | None:intergenic | 50.0% | |
| CACTACCTCCGCTTCAAATC+GGG | - | chr8.4:60347002-60347021 | None:intergenic | 50.0% | |
| CAGGATTCTCGCTTGGACAA+AGG | - | chr8.4:60346896-60346915 | None:intergenic | 50.0% | |
| CCAGGAACCAAAGCAAGTCT+CGG | - | chr8.4:60347136-60347155 | None:intergenic | 50.0% | |
| CGGAGGTAGTGAAAGTTGAG+AGG | + | chr8.4:60347011-60347030 | MS.gene92396:CDS | 50.0% | |
| CTGTGATCCGAGAACGTTTC+CGG | + | chr8.4:60346913-60346932 | MS.gene92396:CDS | 50.0% | |
| GCCTCCGTTAGAAGATTGGA+TGG | + | chr8.4:60349861-60349880 | MS.gene92396:CDS | 50.0% | |
| GCTCCATGGCTCTCTTTCAT+TGG | + | chr8.4:60348446-60348465 | MS.gene92396:CDS | 50.0% | |
| GGTTGCCTCCGTTAGAAGAT+TGG | + | chr8.4:60349857-60349876 | MS.gene92396:CDS | 50.0% | |
| TCATGACCCGGAAACGTTCT+CGG | - | chr8.4:60346923-60346942 | None:intergenic | 50.0% | |
| TCATTCCATACGGCCGTTTC+AGG | + | chr8.4:60348725-60348744 | MS.gene92396:CDS | 50.0% | |
| TCTCGAAAACGACGACGTTG+TGG | - | chr8.4:60346721-60346740 | None:intergenic | 50.0% | |
| TGTGATCCGAGAACGTTTCC+GGG | + | chr8.4:60346914-60346933 | MS.gene92396:CDS | 50.0% | |
| TTCCTGTTGTAGCTCCTTGG+CGG | - | chr8.4:60346696-60346715 | None:intergenic | 50.0% | |
| TTCGAGAAGAACAACCGCGT+TGG | + | chr8.4:60346734-60346753 | MS.gene92396:CDS | 50.0% | |
| ! | CTGGTGAGTTTGGGATACAC+GGG | + | chr8.4:60346972-60346991 | MS.gene92396:CDS | 50.0% |
| ! | GCGGTTGATGTGTGTTCTCA+TGG | + | chr8.4:60347461-60347480 | MS.gene92396:intron | 50.0% |
| ! | GCTGGTGAGTTTGGGATACA+CGG | + | chr8.4:60346971-60346990 | MS.gene92396:CDS | 50.0% |
| ! | GGCTTGGTTGCCTTTGAAGA+TGG | + | chr8.4:60348160-60348179 | MS.gene92396:CDS | 50.0% |
| ! | TGTGGAACCGAGACTTGCTT+TGG | + | chr8.4:60347126-60347145 | MS.gene92396:CDS | 50.0% |
| AAAGTTGCAGTGATCGGCGC+CGG | + | chr8.4:60346653-60346672 | MS.gene92396:CDS | 55.0% | |
| AGAGGAAAGGAGGGAAGGAC+TGG | + | chr8.4:60347029-60347048 | MS.gene92396:CDS | 55.0% | |
| AGGACTGGGTGGTTGAGTCA+AGG | + | chr8.4:60347044-60347063 | MS.gene92396:CDS | 55.0% | |
| CAATGGCTAGCGGCACAGAT+TGG | + | chr8.4:60349835-60349854 | MS.gene92396:CDS | 55.0% | |
| CGGAAACGTTCTCGGATCAC+AGG | - | chr8.4:60346915-60346934 | None:intergenic | 55.0% | |
| CGGATCACAGGATTCTCGCT+TGG | - | chr8.4:60346903-60346922 | None:intergenic | 55.0% | |
| GACTGGGTGGTTGAGTCAAG+GGG | + | chr8.4:60347046-60347065 | MS.gene92396:CDS | 55.0% | |
| GAGAAGAACAACCGCGTTGG+AGG | + | chr8.4:60346737-60346756 | MS.gene92396:CDS | 55.0% | |
| GAGGAAAGGAGGGAAGGACT+GGG | + | chr8.4:60347030-60347049 | MS.gene92396:CDS | 55.0% | |
| GAGTCGAACTCGTCTGAGCT+CGG | - | chr8.4:60349372-60349391 | None:intergenic | 55.0% | |
| GCCAAGGAGCTACAACAGGA+AGG | + | chr8.4:60346695-60346714 | MS.gene92396:CDS | 55.0% | |
| GCCTTCCTGTTGTAGCTCCT+TGG | - | chr8.4:60346699-60346718 | None:intergenic | 55.0% | |
| GGACTGGGTGGTTGAGTCAA+GGG | + | chr8.4:60347045-60347064 | MS.gene92396:CDS | 55.0% | |
| TTTCTAGACTTGCCGTGGCC+AGG | + | chr8.4:60348551-60348570 | MS.gene92396:intron | 55.0% | |
| ! | CCGAGACTTGCTTTGGTTCC+TGG | + | chr8.4:60347133-60347152 | MS.gene92396:CDS | 55.0% |
| ! | CGGGTTGACCCGATTTGAAG+CGG | + | chr8.4:60346991-60347010 | MS.gene92396:CDS | 55.0% |
| ! | GTTGACCCGATTTGAAGCGG+AGG | + | chr8.4:60346994-60347013 | MS.gene92396:CDS | 55.0% |
| ACAACCGCGTTGGAGGAACC+TGG | + | chr8.4:60346744-60346763 | MS.gene92396:CDS | 60.0% | |
| GAAAGGAGGGAAGGACTGGG+TGG | + | chr8.4:60347033-60347052 | MS.gene92396:CDS | 60.0% | |
| TGGGTGGTTGAGTCAAGGGG+AGG | + | chr8.4:60347049-60347068 | MS.gene92396:CDS | 60.0% | |
| !! | TTCCTCCTTCGCTGGCTCCA+TGG | + | chr8.4:60348432-60348451 | MS.gene92396:CDS | 60.0% |
| AGCCATGGAGCCAGCGAAGG+AGG | - | chr8.4:60348437-60348456 | None:intergenic | 65.0% | |
| CGCCGCCAAGGAGCTACAAC+AGG | + | chr8.4:60346691-60346710 | MS.gene92396:CDS | 65.0% | |
| GAGAGCCATGGAGCCAGCGA+AGG | - | chr8.4:60348440-60348459 | None:intergenic | 65.0% | |
| GTAGCTCCTTGGCGGCGATG+AGG | - | chr8.4:60346688-60346707 | None:intergenic | 65.0% | |
| CTCCTTGGCGGCGATGAGGC+CGG | - | chr8.4:60346684-60346703 | None:intergenic | 70.0% | |
| GGCGATGAGGCCGGAGACTC+CGG | - | chr8.4:60346675-60346694 | None:intergenic | 70.0% | |
| ! | GTGATCGGCGCCGGAGTCTC+CGG | + | chr8.4:60346662-60346681 | MS.gene92396:CDS | 70.0% |
| CTCCGGCCTCATCGCCGCCA+AGG | + | chr8.4:60346679-60346698 | MS.gene92396:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 60346647 | 60349987 | 60346647 | ID=MS.gene92396 |
| chr8.4 | mRNA | 60346647 | 60349987 | 60346647 | ID=MS.gene92396.t1;Parent=MS.gene92396 |
| chr8.4 | exon | 60346647 | 60347225 | 60346647 | ID=MS.gene92396.t1.exon1;Parent=MS.gene92396.t1 |
| chr8.4 | CDS | 60346647 | 60347225 | 60346647 | ID=cds.MS.gene92396.t1;Parent=MS.gene92396.t1 |
| chr8.4 | exon | 60347871 | 60348023 | 60347871 | ID=MS.gene92396.t1.exon2;Parent=MS.gene92396.t1 |
| chr8.4 | CDS | 60347871 | 60348023 | 60347871 | ID=cds.MS.gene92396.t1;Parent=MS.gene92396.t1 |
| chr8.4 | exon | 60348139 | 60348221 | 60348139 | ID=MS.gene92396.t1.exon3;Parent=MS.gene92396.t1 |
| chr8.4 | CDS | 60348139 | 60348221 | 60348139 | ID=cds.MS.gene92396.t1;Parent=MS.gene92396.t1 |
| chr8.4 | exon | 60348346 | 60348481 | 60348346 | ID=MS.gene92396.t1.exon4;Parent=MS.gene92396.t1 |
| chr8.4 | CDS | 60348346 | 60348481 | 60348346 | ID=cds.MS.gene92396.t1;Parent=MS.gene92396.t1 |
| chr8.4 | exon | 60348573 | 60348746 | 60348573 | ID=MS.gene92396.t1.exon5;Parent=MS.gene92396.t1 |
| chr8.4 | CDS | 60348573 | 60348746 | 60348573 | ID=cds.MS.gene92396.t1;Parent=MS.gene92396.t1 |
| chr8.4 | exon | 60349823 | 60349987 | 60349823 | ID=MS.gene92396.t1.exon6;Parent=MS.gene92396.t1 |
| chr8.4 | CDS | 60349823 | 60349987 | 60349823 | ID=cds.MS.gene92396.t1;Parent=MS.gene92396.t1 |
| Gene Sequence |
| Protein sequence |
