Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92492.t1 | XP_003621754.2 | 97.8 | 507 | 11 | 0 | 1 | 507 | 91 | 597 | 1.90E-293 | 1017.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92492.t1 | Q9FY99 | 87.3 | 498 | 61 | 2 | 8 | 504 | 99 | 595 | 3.8e-258 | 891.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92492.t1 | G7KUS5 | 97.8 | 507 | 11 | 0 | 1 | 507 | 91 | 597 | 1.4e-293 | 1017.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene92492 | MS.gene07124 | PPI |
| MS.gene92492 | MS.gene22993 | PPI |
| MS.gene92492 | MS.gene34192 | PPI |
| MS.gene92492 | MS.gene82919 | PPI |
| MS.gene92492 | MS.gene026963 | PPI |
| MS.gene92492 | MS.gene06964 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92492.t1 | MTR_7g022440 | 97.830 | 507 | 11 | 0 | 1 | 507 | 91 | 597 | 0.0 | 1044 |
| MS.gene92492.t1 | MTR_0590s0010 | 71.827 | 394 | 62 | 4 | 120 | 502 | 1 | 356 | 0.0 | 565 |
| MS.gene92492.t1 | MTR_7g111760 | 52.893 | 484 | 217 | 4 | 15 | 498 | 6 | 478 | 0.0 | 532 |
| MS.gene92492.t1 | MTR_7g111760 | 52.893 | 484 | 217 | 4 | 15 | 498 | 126 | 598 | 0.0 | 532 |
| MS.gene92492.t1 | MTR_7g037440 | 51.235 | 486 | 213 | 6 | 17 | 493 | 29 | 499 | 9.03e-164 | 474 |
| MS.gene92492.t1 | MTR_6g022860 | 50.311 | 483 | 216 | 6 | 17 | 490 | 32 | 499 | 4.37e-160 | 465 |
| MS.gene92492.t1 | MTR_0275s0010 | 80.224 | 268 | 35 | 2 | 88 | 355 | 1 | 250 | 1.15e-153 | 438 |
| MS.gene92492.t1 | MTR_4g085930 | 63.924 | 158 | 37 | 3 | 350 | 504 | 4 | 144 | 2.28e-61 | 198 |
| MS.gene92492.t1 | MTR_1034s0010 | 77.778 | 63 | 14 | 0 | 18 | 80 | 96 | 158 | 5.85e-27 | 107 |
| MS.gene92492.t1 | MTR_7g037420 | 37.306 | 193 | 104 | 5 | 16 | 193 | 9 | 199 | 1.38e-25 | 108 |
| MS.gene92492.t1 | MTR_8g015270 | 75.676 | 37 | 9 | 0 | 468 | 504 | 74 | 110 | 7.85e-13 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92492.t1 | AT5G13110 | 87.349 | 498 | 61 | 2 | 8 | 504 | 99 | 595 | 0.0 | 917 |
| MS.gene92492.t1 | AT1G24280 | 87.398 | 492 | 61 | 1 | 13 | 504 | 108 | 598 | 0.0 | 901 |
| MS.gene92492.t1 | AT5G35790 | 80.612 | 490 | 94 | 1 | 13 | 502 | 86 | 574 | 0.0 | 842 |
| MS.gene92492.t1 | AT1G09420 | 51.000 | 500 | 233 | 3 | 1 | 500 | 137 | 624 | 0.0 | 533 |
| MS.gene92492.t1 | AT1G09420 | 49.804 | 510 | 234 | 4 | 1 | 500 | 137 | 634 | 0.0 | 523 |
| MS.gene92492.t1 | AT3G27300 | 51.230 | 488 | 209 | 8 | 17 | 493 | 31 | 500 | 2.42e-165 | 478 |
| MS.gene92492.t1 | AT3G27300 | 51.230 | 488 | 209 | 8 | 17 | 493 | 31 | 500 | 2.42e-165 | 478 |
| MS.gene92492.t1 | AT3G27300 | 51.230 | 488 | 209 | 8 | 17 | 493 | 31 | 500 | 2.42e-165 | 478 |
| MS.gene92492.t1 | AT3G27300 | 51.230 | 488 | 209 | 8 | 17 | 493 | 85 | 554 | 1.77e-164 | 478 |
| MS.gene92492.t1 | AT3G27300 | 51.230 | 488 | 209 | 8 | 17 | 493 | 102 | 571 | 4.91e-164 | 478 |
| MS.gene92492.t1 | AT5G40760 | 50.408 | 490 | 216 | 8 | 13 | 493 | 28 | 499 | 4.60e-162 | 470 |
| MS.gene92492.t1 | AT5G40760 | 50.408 | 490 | 216 | 8 | 13 | 493 | 28 | 499 | 4.60e-162 | 470 |
Find 111 sgRNAs with CRISPR-Local
Find 331 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTTGTGTGGTTCTTATAT+TGG | 0.193945 | 7.3:+77237558 | None:intergenic |
| AATCTGTACAATCGGAATTT+TGG | 0.208150 | 7.3:-77237054 | MS.gene92492:CDS |
| TTGATATTCTCAGAAGATTT+TGG | 0.217136 | 7.3:-77238168 | MS.gene92492:CDS |
| ACAGCATCTATGAATATATT+AGG | 0.222301 | 7.3:+77238800 | None:intergenic |
| TCAAGCTTGTCAGCATCTTC+TGG | 0.245037 | 7.3:-77238770 | MS.gene92492:CDS |
| TGTAGGTACTTTGACAATTA+TGG | 0.250023 | 7.3:-77238046 | MS.gene92492:intron |
| AAAAGATGTTTCTATCATTC+TGG | 0.258419 | 7.3:-77240174 | MS.gene92492:CDS |
| TGCTGGAAATATCTTCTTCT+TGG | 0.264980 | 7.3:+77241073 | None:intergenic |
| TCCTCTGCATCCAAACTAAC+AGG | 0.311717 | 7.3:+77237959 | None:intergenic |
| GTCATTGTTGAAAAGCCTTT+TGG | 0.318392 | 7.3:-77238728 | MS.gene92492:CDS |
| GCCCCATCGTACGTTGTATC+TGG | 0.349402 | 7.3:+77236154 | None:intergenic |
| GGGCAGCCGCGGCAAATGTC+GGG | 0.355148 | 7.3:+77237477 | None:intergenic |
| CCGAGATACGGGTACAGTTC+AGG | 0.377664 | 7.3:-77237089 | MS.gene92492:CDS |
| ACCCCAGAGTACTATCCTTA+TGG | 0.387489 | 7.3:-77236212 | MS.gene92492:CDS |
| ATAACTGTTGTTGGAGCCTC+TGG | 0.390269 | 7.3:-77241104 | MS.gene92492:CDS |
| TTCAAATAAATACCTTCATC+CGG | 0.391157 | 7.3:+77236985 | None:intergenic |
| TACAGGATCGATCACTATCT+TGG | 0.401089 | 7.3:-77238282 | MS.gene92492:intron |
| AATGGAAACCCCTGTTAGTT+TGG | 0.405110 | 7.3:-77237969 | MS.gene92492:CDS |
| CTATGAGGGTTGTCTGCCTA+AGG | 0.408589 | 7.3:-77241036 | MS.gene92492:intron |
| AACGTACGATGGGGCGACCT+TGG | 0.409795 | 7.3:-77236146 | MS.gene92492:CDS |
| ACTACATCCTCGAGTTTAAT+CGG | 0.412521 | 7.3:+77237587 | None:intergenic |
| TGGCAGCATTTCACCATTTG+TGG | 0.426179 | 7.3:-77240918 | MS.gene92492:intron |
| TTGCTTCTTGATGCAATTGA+AGG | 0.439881 | 7.3:-77236326 | MS.gene92492:CDS |
| TCCTTATGGTAGTCGTGGTC+CGG | 0.442639 | 7.3:-77236198 | MS.gene92492:CDS |
| CAAGCTTGTCAGCATCTTCT+GGG | 0.450107 | 7.3:-77238769 | MS.gene92492:CDS |
| CATCTTCTGGGAATGGTGGT+TGG | 0.452748 | 7.3:-77238757 | MS.gene92492:CDS |
| AGCAACCTCTCATAAGCATC+TGG | 0.454571 | 7.3:+77236344 | None:intergenic |
| TGCCGGGCAATCTGTACAAT+CGG | 0.462688 | 7.3:-77237062 | MS.gene92492:CDS |
| TTACCTCTTATCAATTCTAC+AGG | 0.462844 | 7.3:+77240836 | None:intergenic |
| GTCGGGGTTAAGCTGCCCTT+TGG | 0.467588 | 7.3:+77237494 | None:intergenic |
| AATTGAAGACGGTGTTGAAA+AGG | 0.473134 | 7.3:-77241150 | MS.gene92492:CDS |
| TGATGCAGAACTGAGAAATA+TGG | 0.475269 | 7.3:-77240874 | MS.gene92492:CDS |
| GAGGAATTGAAAGATAAAAC+AGG | 0.478809 | 7.3:+77238822 | None:intergenic |
| AGGGGTTTCCATTGCAAAGA+GGG | 0.478932 | 7.3:+77237979 | None:intergenic |
| AGAGAACTGCAGTGAAAAGA+TGG | 0.483255 | 7.3:-77240208 | MS.gene92492:CDS |
| AGGTTACCCGCCACGTCCTT+CGG | 0.484081 | 7.3:+77238143 | None:intergenic |
| TTCCGATTGTACAGATTGCC+CGG | 0.484990 | 7.3:+77237060 | None:intergenic |
| CTCTTCTATCTCATTCAACA+CGG | 0.486759 | 7.3:+77236244 | None:intergenic |
| TACCATAAGGATAGTACTCT+GGG | 0.486791 | 7.3:+77236210 | None:intergenic |
| TTCTGGCCAATATGATTCTC+CGG | 0.488197 | 7.3:-77240157 | MS.gene92492:CDS |
| TTGGATTCAGAGCCGAGATA+CGG | 0.488957 | 7.3:-77237101 | MS.gene92492:intron |
| ACTGTTAGTATAACTGTTGT+TGG | 0.491948 | 7.3:-77241113 | MS.gene92492:CDS |
| ACTTCGAGCATAACCACAAA+TGG | 0.497023 | 7.3:+77240905 | None:intergenic |
| TTACCTGTAGAATTGATAAG+AGG | 0.497788 | 7.3:-77240839 | MS.gene92492:intron |
| CTTCATAGATAATGCAAGAT+GGG | 0.499428 | 7.3:-77237453 | MS.gene92492:CDS |
| CCTGAACTGTACCCGTATCT+CGG | 0.502242 | 7.3:+77237089 | None:intergenic |
| AGAGGACATTAGAAATGAAA+AGG | 0.504615 | 7.3:-77237942 | MS.gene92492:intron |
| CTACCATAAGGATAGTACTC+TGG | 0.507992 | 7.3:+77236209 | None:intergenic |
| CCCTGTTAGTTTGGATGCAG+AGG | 0.514673 | 7.3:-77237960 | MS.gene92492:CDS |
| TAGATAATGCAAGATGGGAT+GGG | 0.518772 | 7.3:-77237448 | MS.gene92492:CDS |
| ACCAGGGTTAGGAATGAAGT+TGG | 0.519128 | 7.3:-77236947 | MS.gene92492:CDS |
| AGGGCAGCCGCGGCAAATGT+CGG | 0.521873 | 7.3:+77237476 | None:intergenic |
| GCAAGATAGTGAGCACAAAC+CGG | 0.522419 | 7.3:+77236179 | None:intergenic |
| AACAACAAAATACCAGGGTT+AGG | 0.522580 | 7.3:-77236958 | MS.gene92492:CDS |
| AAACCTGAAAATTTGATCCT+CGG | 0.524458 | 7.3:+77238652 | None:intergenic |
| GATTCTGAATCACGACCAAA+AGG | 0.526905 | 7.3:+77238713 | None:intergenic |
| ATAAAAGTTCAGCCGGATGA+AGG | 0.527613 | 7.3:-77236997 | MS.gene92492:CDS |
| CTATCTTGGAAAAGAGCTTG+TGG | 0.529498 | 7.3:-77238268 | MS.gene92492:CDS |
| TTGGTACCGAAGGACGTGGC+GGG | 0.530531 | 7.3:-77238149 | MS.gene92492:intron |
| TGGATTCAGAGCCGAGATAC+GGG | 0.534980 | 7.3:-77237100 | MS.gene92492:intron |
| ACCGGACCACGACTACCATA+AGG | 0.535565 | 7.3:+77236197 | None:intergenic |
| AATACTAACCCTCTTTGCAA+TGG | 0.536733 | 7.3:-77237987 | MS.gene92492:CDS |
| TTGTCAGCATCTTCTGGGAA+TGG | 0.537525 | 7.3:-77238764 | MS.gene92492:CDS |
| ACTTGTTATAAAAGTTCAGC+CGG | 0.538788 | 7.3:-77237004 | MS.gene92492:CDS |
| GAAATATCTTCTTCTTGGCA+AGG | 0.541350 | 7.3:+77241078 | None:intergenic |
| ATAGATAATGCAAGATGGGA+TGG | 0.550173 | 7.3:-77237449 | MS.gene92492:CDS |
| ATTTGTAGCATGATCAAGAT+CGG | 0.550956 | 7.3:+77237029 | None:intergenic |
| GGTACAGTTCAGGAAAGTGC+CGG | 0.553447 | 7.3:-77237079 | MS.gene92492:CDS |
| AAAATCAACAACAAAATACC+AGG | 0.554633 | 7.3:-77236964 | MS.gene92492:CDS |
| TACTATCCTTATGGTAGTCG+TGG | 0.555266 | 7.3:-77236203 | MS.gene92492:CDS |
| GGCCAGATACAACGTACGAT+GGG | 0.556342 | 7.3:-77236156 | MS.gene92492:CDS |
| TAAATCTTCATTATGCAGCA+AGG | 0.559935 | 7.3:-77236912 | MS.gene92492:intron |
| CTTCTTGGCAAGGTCTCCAG+AGG | 0.565735 | 7.3:+77241088 | None:intergenic |
| TCTTCATAGATAATGCAAGA+TGG | 0.568560 | 7.3:-77237454 | MS.gene92492:CDS |
| ATCTATGAAGAGGGCAGCCG+CGG | 0.574298 | 7.3:+77237466 | None:intergenic |
| TCTTCTATCTCATTCAACAC+GGG | 0.574817 | 7.3:+77236245 | None:intergenic |
| TCAGCATCTTCTGGGAATGG+TGG | 0.580103 | 7.3:-77238761 | MS.gene92492:CDS |
| ATGCAACACCTCCTCTTGTG+TGG | 0.580289 | 7.3:+77237546 | None:intergenic |
| TGATGACAAAACTGTACCAA+AGG | 0.580864 | 7.3:-77237510 | MS.gene92492:CDS |
| GTGATGAACTCGATGCAGCT+TGG | 0.586697 | 7.3:-77236280 | MS.gene92492:CDS |
| TGTTTATTTCAGGTACTCGA+AGG | 0.589589 | 7.3:-77236372 | MS.gene92492:intron |
| GATGACAAAACTGTACCAAA+GGG | 0.590628 | 7.3:-77237509 | MS.gene92492:CDS |
| TGATCTTGTTAAAGCAGCTG+AGG | 0.594578 | 7.3:+77238691 | None:intergenic |
| GTACAGTTCAGGAAAGTGCC+GGG | 0.595881 | 7.3:-77237078 | MS.gene92492:CDS |
| AGATAATGCAAGATGGGATG+GGG | 0.599941 | 7.3:-77237447 | MS.gene92492:CDS |
| CCTCTGCATCCAAACTAACA+GGG | 0.600678 | 7.3:+77237960 | None:intergenic |
| ATCTTGCATTATCTATGAAG+AGG | 0.601254 | 7.3:+77237456 | None:intergenic |
| ATGGAATCTAAAATTGAAGA+CGG | 0.601775 | 7.3:-77241161 | MS.gene92492:CDS |
| CAGGGGTTTCCATTGCAAAG+AGG | 0.602818 | 7.3:+77237978 | None:intergenic |
| TCCAACTTCATTCCTAACCC+TGG | 0.603899 | 7.3:+77236946 | None:intergenic |
| GCATCTATGAATATATTAGG+AGG | 0.613908 | 7.3:+77238803 | None:intergenic |
| GGCAGCCGCGGCAAATGTCG+GGG | 0.616181 | 7.3:+77237478 | None:intergenic |
| TCTTGCATTATCTATGAAGA+GGG | 0.616374 | 7.3:+77237457 | None:intergenic |
| CTTAACCCCGACATTTGCCG+CGG | 0.616851 | 7.3:-77237483 | MS.gene92492:CDS |
| TATAAGAACCACACAAGAGG+AGG | 0.626347 | 7.3:-77237554 | MS.gene92492:CDS |
| CAAGAAGCTGAATGAACATG+AGG | 0.635311 | 7.3:-77240115 | MS.gene92492:intron |
| CAATATAAGAACCACACAAG+AGG | 0.636087 | 7.3:-77237557 | MS.gene92492:CDS |
| AATGAAGATTTAAATTACTG+CGG | 0.648676 | 7.3:+77236923 | None:intergenic |
| TATGAGACCGATTAAACTCG+AGG | 0.649881 | 7.3:-77237594 | MS.gene92492:CDS |
| GGTTTGTGCTCACTATCTTG+CGG | 0.651306 | 7.3:-77236177 | MS.gene92492:CDS |
| CTCTGCATCCAAACTAACAG+GGG | 0.654249 | 7.3:+77237961 | None:intergenic |
| CGGCCAGATACAACGTACGA+TGG | 0.658836 | 7.3:-77236157 | MS.gene92492:CDS |
| TTTGGTACCGAAGGACGTGG+CGG | 0.661444 | 7.3:-77238150 | MS.gene92492:CDS |
| GCCAGATACAACGTACGATG+GGG | 0.661518 | 7.3:-77236155 | MS.gene92492:CDS |
| AAATACCAGATGCTTATGAG+AGG | 0.670335 | 7.3:-77236349 | MS.gene92492:CDS |
| GGAAAGCATTACACACCAAG+AGG | 0.670420 | 7.3:-77237403 | MS.gene92492:intron |
| ATGTATTGCCTCGACCACAA+AGG | 0.685820 | 7.3:+77238204 | None:intergenic |
| TAATCGGTCTCATAGAACGA+AGG | 0.698002 | 7.3:+77237603 | None:intergenic |
| AAATCAACAACAAAATACCA+GGG | 0.703547 | 7.3:-77236963 | MS.gene92492:CDS |
| ACTCAAGCAGTATCTGACCG+AGG | 0.738694 | 7.3:-77238669 | MS.gene92492:CDS |
| ACCATAAGGATAGTACTCTG+GGG | 0.757794 | 7.3:+77236211 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATATAT+AGG | + | chr7.3:77237291-77237272 | None:intergenic | 0.0% |
| !! | TTAAATATTTAAAAAAAAAA+GGG | + | chr7.3:77238265-77238284 | None:intergenic | 0.0% |
| !! | TTTAAATATTTAAAAAAAAA+AGG | + | chr7.3:77238266-77238285 | None:intergenic | 0.0% |
| !!! | AATATTTTAATGTTTATTTC+AGG | - | chr7.3:77240795-77240814 | MS.gene92492:intron | 10.0% |
| !!! | TATTTTTGTTTTGTATATTT+TGG | - | chr7.3:77236188-77236207 | MS.gene92492:CDS | 10.0% |
| !! | ATCATTTAACATTTAAACTT+AGG | + | chr7.3:77238082-77238101 | None:intergenic | 15.0% |
| !! | ATTAAAATATTATTCGGAAA+AGG | + | chr7.3:77240786-77240805 | None:intergenic | 15.0% |
| !! | TGAATTGTTTATTTATTTCA+TGG | - | chr7.3:77236239-77236258 | MS.gene92492:CDS | 15.0% |
| !!! | AATTTTATTTCTTCTACATT+AGG | + | chr7.3:77237804-77237823 | None:intergenic | 15.0% |
| !!! | ACTTTTTTTGCTTAAATTTA+AGG | - | chr7.3:77239369-77239388 | MS.gene92492:intron | 15.0% |
| !!! | ATTAAACTTCTAAATTGTTT+TGG | - | chr7.3:77240057-77240076 | MS.gene92492:intron | 15.0% |
| !!! | ATTTGAAACAAATGAATTTA+AGG | + | chr7.3:77239503-77239522 | None:intergenic | 15.0% |
| !!! | CAAAATGTTTTTATATAAGT+TGG | - | chr7.3:77237531-77237550 | MS.gene92492:CDS | 15.0% |
| !!! | TAAAGTGCTTTATTTAAAAT+GGG | - | chr7.3:77238864-77238883 | MS.gene92492:intron | 15.0% |
| !! | AAGAATATAATGATGTGATT+AGG | + | chr7.3:77238112-77238131 | None:intergenic | 20.0% |
| !! | AATATCTTTGTATATCTTCT+TGG | - | chr7.3:77240378-77240397 | MS.gene92492:intron | 20.0% |
| !! | AATGAAGATTTAAATTACTG+CGG | + | chr7.3:77240257-77240276 | None:intergenic | 20.0% |
| !! | AGAATAGATGATAAGAATAA+AGG | - | chr7.3:77237858-77237877 | MS.gene92492:intron | 20.0% |
| !! | GTTTAATATATTACTCAATG+TGG | - | chr7.3:77237112-77237131 | MS.gene92492:intron | 20.0% |
| !! | TTAGAAGTTTAATAGAAAGA+TGG | + | chr7.3:77240050-77240069 | None:intergenic | 20.0% |
| !!! | AACCATTTAAGATATTGTTT+TGG | + | chr7.3:77237095-77237114 | None:intergenic | 20.0% |
| !!! | AATACAAAAATTGCTTTTGT+AGG | - | chr7.3:77238313-77238332 | MS.gene92492:intron | 20.0% |
| !!! | AGAAACATCTTTTAAGAAAT+TGG | + | chr7.3:77236996-77237015 | None:intergenic | 20.0% |
| !!! | ATACAAAAATTGCTTTTGTA+GGG | - | chr7.3:77238314-77238333 | MS.gene92492:intron | 20.0% |
| !!! | CATGATTTTTCATCTTATTT+AGG | - | chr7.3:77240481-77240500 | MS.gene92492:intron | 20.0% |
| !!! | CTAATTATCTGTAGATTTTA+AGG | - | chr7.3:77238837-77238856 | MS.gene92492:CDS | 20.0% |
| !!! | GTAAAGTGCTTTATTTAAAA+TGG | - | chr7.3:77238863-77238882 | MS.gene92492:intron | 20.0% |
| !!! | GTTTTGTATATTTTGGAAAT+TGG | - | chr7.3:77236195-77236214 | MS.gene92492:CDS | 20.0% |
| !!! | TACTTTTCTGCTTATATTTA+AGG | + | chr7.3:77239325-77239344 | None:intergenic | 20.0% |
| !!! | TGGTTATATACTTTTGTTAT+AGG | - | chr7.3:77239265-77239284 | MS.gene92492:intron | 20.0% |
| ! | AAAATCAACAACAAAATACC+AGG | - | chr7.3:77240213-77240232 | MS.gene92492:intron | 25.0% |
| ! | AAATCAACAACAAAATACCA+GGG | - | chr7.3:77240214-77240233 | MS.gene92492:intron | 25.0% |
| ! | AATAAGAGAACATCTCATTA+TGG | - | chr7.3:77240350-77240369 | MS.gene92492:intron | 25.0% |
| ! | AATAATAGCAATAAGAGATG+CGG | + | chr7.3:77240453-77240472 | None:intergenic | 25.0% |
| ! | AATGTGTGTCAAATATCATA+TGG | + | chr7.3:77240735-77240754 | None:intergenic | 25.0% |
| ! | ACAGCATCTATGAATATATT+AGG | + | chr7.3:77238380-77238399 | None:intergenic | 25.0% |
| ! | ACTCAGTATATGAATAATGA+AGG | - | chr7.3:77238207-77238226 | MS.gene92492:CDS | 25.0% |
| ! | AGATGATAAGAATAAAGGAA+TGG | - | chr7.3:77237863-77237882 | MS.gene92492:intron | 25.0% |
| ! | ATATATCAATATCCAACCTT+AGG | + | chr7.3:77236160-77236179 | None:intergenic | 25.0% |
| ! | ATCCATATGTTCTCTTAATT+AGG | + | chr7.3:77237594-77237613 | None:intergenic | 25.0% |
| ! | ATTGCTAATGACACAAAATT+TGG | - | chr7.3:77236854-77236873 | MS.gene92492:intron | 25.0% |
| ! | ATTGGTTATGTGTATGTATT+TGG | - | chr7.3:77236213-77236232 | MS.gene92492:CDS | 25.0% |
| ! | CAAAAATGAGATTTGAGAAT+CGG | + | chr7.3:77238951-77238970 | None:intergenic | 25.0% |
| ! | CACTTATTCTGATCTTAAAA+TGG | - | chr7.3:77239077-77239096 | MS.gene92492:intron | 25.0% |
| ! | CTGCTAATAAAAAGACTTTA+AGG | - | chr7.3:77237758-77237777 | MS.gene92492:intron | 25.0% |
| ! | CTTATATGATAAAGTGTGAA+TGG | + | chr7.3:77238595-77238614 | None:intergenic | 25.0% |
| ! | GCAAAAAAAGTTCATGTATT+TGG | + | chr7.3:77239360-77239379 | None:intergenic | 25.0% |
| ! | TAAAATGGGAAACATTATAC+AGG | - | chr7.3:77238878-77238897 | MS.gene92492:intron | 25.0% |
| ! | TCAATTAACAATATTCTGAC+TGG | - | chr7.3:77237381-77237400 | MS.gene92492:intron | 25.0% |
| ! | TTATACAGAAAGACAAATGT+TGG | - | chr7.3:77237338-77237357 | MS.gene92492:intron | 25.0% |
| ! | TTCAAATAAATACCTTCATC+CGG | + | chr7.3:77240195-77240214 | None:intergenic | 25.0% |
| ! | TTCTACATTAGGAAAATACT+GGG | + | chr7.3:77237793-77237812 | None:intergenic | 25.0% |
| ! | TTGCTAATGACACAAAATTT+GGG | - | chr7.3:77236855-77236874 | MS.gene92492:intron | 25.0% |
| ! | TTGGTTATGTGTATGTATTT+GGG | - | chr7.3:77236214-77236233 | MS.gene92492:CDS | 25.0% |
| !! | AAAAGATGTTTCTATCATTC+TGG | - | chr7.3:77237003-77237022 | MS.gene92492:CDS | 25.0% |
| !! | ATGGAATCTAAAATTGAAGA+CGG | - | chr7.3:77236016-77236035 | MS.gene92492:CDS | 25.0% |
| !! | ATGTTTGAGAATTTTTGTTG+TGG | - | chr7.3:77236938-77236957 | MS.gene92492:CDS | 25.0% |
| !! | ATTTTTCTACATCTAATCCA+AGG | + | chr7.3:77241051-77241070 | None:intergenic | 25.0% |
| !! | CTGTTTTCATAAGCTTATAT+TGG | - | chr7.3:77238686-77238705 | MS.gene92492:CDS | 25.0% |
| !! | GTTTAATTTCACTGCATTAA+TGG | + | chr7.3:77240764-77240783 | None:intergenic | 25.0% |
| !! | TATAGAGATGACATTTTATG+TGG | + | chr7.3:77237939-77237958 | None:intergenic | 25.0% |
| !! | TGCTTTCTTTATCTTTTCTT+GGG | - | chr7.3:77236601-77236620 | MS.gene92492:intron | 25.0% |
| !! | TTCTAACGGAATGTATTTTT+GGG | + | chr7.3:77240330-77240349 | None:intergenic | 25.0% |
| !! | TTGATATTCTCAGAAGATTT+TGG | - | chr7.3:77239009-77239028 | MS.gene92492:intron | 25.0% |
| !! | TTGTGTCATTAGCAATATAA+GGG | + | chr7.3:77236850-77236869 | None:intergenic | 25.0% |
| !! | TTTCTAACGGAATGTATTTT+TGG | + | chr7.3:77240331-77240350 | None:intergenic | 25.0% |
| !! | TTTCTGCTTATATTTAAGGT+CGG | + | chr7.3:77239321-77239340 | None:intergenic | 25.0% |
| !! | TTTGTGTCATTAGCAATATA+AGG | + | chr7.3:77236851-77236870 | None:intergenic | 25.0% |
| !!! | AACAATCTTAGAAGTGTTTA+TGG | - | chr7.3:77238777-77238796 | MS.gene92492:CDS | 25.0% |
| !!! | ACTTTTTTCTGAAATTCCTT+TGG | - | chr7.3:77239426-77239445 | MS.gene92492:intron | 25.0% |
| !!! | CTTTTTTCTGAAATTCCTTT+GGG | - | chr7.3:77239427-77239446 | MS.gene92492:intron | 25.0% |
| !!! | GATGTTCTCTTATTTTCTAA+CGG | + | chr7.3:77240344-77240363 | None:intergenic | 25.0% |
| !!! | TCTTACTATTTGTTATGCTT+GGG | - | chr7.3:77236904-77236923 | MS.gene92492:intron | 25.0% |
| !!! | TTCTTACTATTTGTTATGCT+TGG | - | chr7.3:77236903-77236922 | MS.gene92492:intron | 25.0% |
| !!! | TTGGTTTTCATAAACTTGTA+GGG | - | chr7.3:77237550-77237569 | MS.gene92492:CDS | 25.0% |
| !!! | TTTTTGCTTAAATTTAAGGC+CGG | - | chr7.3:77239373-77239392 | MS.gene92492:intron | 25.0% |
| AAACCTGAAAATTTGATCCT+CGG | + | chr7.3:77238528-77238547 | None:intergenic | 30.0% | |
| AACTTTCATCCAGATTAGAT+AGG | - | chr7.3:77237202-77237221 | MS.gene92492:intron | 30.0% | |
| AATAAAATTCACATGCACCT+TGG | + | chr7.3:77237140-77237159 | None:intergenic | 30.0% | |
| ACAATACTCAAGGAACTTTA+TGG | + | chr7.3:77237424-77237443 | None:intergenic | 30.0% | |
| ACAGATAATTAGAGCATGTT+TGG | + | chr7.3:77238829-77238848 | None:intergenic | 30.0% | |
| ACCAGCTAAATAATCTATTG+CGG | + | chr7.3:77240645-77240664 | None:intergenic | 30.0% | |
| ACTGTTAGTATAACTGTTGT+TGG | - | chr7.3:77236064-77236083 | MS.gene92492:intron | 30.0% | |
| AGAAATGAAAAGGTCTCATA+TGG | - | chr7.3:77239245-77239264 | MS.gene92492:intron | 30.0% | |
| AGAGGACATTAGAAATGAAA+AGG | - | chr7.3:77239235-77239254 | MS.gene92492:intron | 30.0% | |
| AGTAACAACTAATGAATGAC+AGG | + | chr7.3:77238000-77238019 | None:intergenic | 30.0% | |
| AGTATGATAAATTTGCACAG+TGG | + | chr7.3:77238149-77238168 | None:intergenic | 30.0% | |
| ATCTTGCATTATCTATGAAG+AGG | + | chr7.3:77239724-77239743 | None:intergenic | 30.0% | |
| ATTAGGTCGTTTATCAAAAC+AGG | + | chr7.3:77237577-77237596 | None:intergenic | 30.0% | |
| ATTTCACTGCATTAATGGAA+TGG | + | chr7.3:77240759-77240778 | None:intergenic | 30.0% | |
| ATTTGTAGCATGATCAAGAT+CGG | + | chr7.3:77240151-77240170 | None:intergenic | 30.0% | |
| CATGACTTTCAATTGCTTAA+TGG | - | chr7.3:77239536-77239555 | MS.gene92492:intron | 30.0% | |
| CTTCATAGATAATGCAAGAT+GGG | - | chr7.3:77239724-77239743 | MS.gene92492:intron | 30.0% | |
| CTTCTACATTAGGAAAATAC+TGG | + | chr7.3:77237794-77237813 | None:intergenic | 30.0% | |
| GACCTAATTAAGAGAACATA+TGG | - | chr7.3:77237589-77237608 | MS.gene92492:CDS | 30.0% | |
| GAGGAATTGAAAGATAAAAC+AGG | + | chr7.3:77238358-77238377 | None:intergenic | 30.0% | |
| GCATCTATGAATATATTAGG+AGG | + | chr7.3:77238377-77238396 | None:intergenic | 30.0% | |
| GCTGAAGAATAAAGAAAACA+AGG | - | chr7.3:77237888-77237907 | MS.gene92492:intron | 30.0% | |
| GGCCAAAACAATATCTTAAA+TGG | - | chr7.3:77237090-77237109 | MS.gene92492:CDS | 30.0% | |
| GTAACAACTAATGAATGACA+GGG | + | chr7.3:77237999-77238018 | None:intergenic | 30.0% | |
| TAAATCTTCATTATGCAGCA+AGG | - | chr7.3:77240265-77240284 | MS.gene92492:intron | 30.0% | |
| TAATAAGAGAGTAAGCTTTC+TGG | - | chr7.3:77237162-77237181 | MS.gene92492:intron | 30.0% | |
| TAATTAGAGCATGTTTGGAT+TGG | + | chr7.3:77238824-77238843 | None:intergenic | 30.0% | |
| TCTTCATAGATAATGCAAGA+TGG | - | chr7.3:77239723-77239742 | MS.gene92492:intron | 30.0% | |
| TCTTGCATTATCTATGAAGA+GGG | + | chr7.3:77239723-77239742 | None:intergenic | 30.0% | |
| TGTAGGTACTTTGACAATTA+TGG | - | chr7.3:77239131-77239150 | MS.gene92492:intron | 30.0% | |
| TTACCTCTTATCAATTCTAC+AGG | + | chr7.3:77236344-77236363 | None:intergenic | 30.0% | |
| TTACCTGTAGAATTGATAAG+AGG | - | chr7.3:77236338-77236357 | MS.gene92492:CDS | 30.0% | |
| TTCTCAAATAGCCGATATAT+CGG | + | chr7.3:77239992-77240011 | None:intergenic | 30.0% | |
| ! | AATCTGTACAATCGGAATTT+TGG | - | chr7.3:77240123-77240142 | MS.gene92492:CDS | 30.0% |
| ! | ACACAAAATTTGGGATTCAA+TGG | - | chr7.3:77236864-77236883 | MS.gene92492:intron | 30.0% |
| ! | ACTTTTTGCACTTTACTATG+AGG | - | chr7.3:77236126-77236145 | MS.gene92492:intron | 30.0% |
| ! | CTTTTTGCACTTTACTATGA+GGG | - | chr7.3:77236127-77236146 | MS.gene92492:intron | 30.0% |
| ! | GCTTTCTTTATCTTTTCTTG+GGG | - | chr7.3:77236602-77236621 | MS.gene92492:intron | 30.0% |
| ! | GTGCTTTCTTTATCTTTTCT+TGG | - | chr7.3:77236600-77236619 | MS.gene92492:intron | 30.0% |
| ! | TTTATATCTTTTCCACGTGT+AGG | - | chr7.3:77239114-77239133 | MS.gene92492:intron | 30.0% |
| ! | TTTATCTTTTCTTGGGGTTA+TGG | - | chr7.3:77236608-77236627 | MS.gene92492:intron | 30.0% |
| !! | AAAAATTGCTTTTGTAGGGT+GGG | - | chr7.3:77238318-77238337 | MS.gene92492:intron | 30.0% |
| !! | ACTTGTTATAAAAGTTCAGC+CGG | - | chr7.3:77240173-77240192 | MS.gene92492:CDS | 30.0% |
| !! | AGAAGTCATTTAGCTTTCAA+TGG | + | chr7.3:77237830-77237849 | None:intergenic | 30.0% |
| !! | ATCTCATTTTTGAACCTTTG+TGG | - | chr7.3:77238959-77238978 | MS.gene92492:intron | 30.0% |
| !! | TACAAAGTGTTGTCAAATAG+CGG | + | chr7.3:77239905-77239924 | None:intergenic | 30.0% |
| !! | TACAGTTTTGTCATCAATGT+AGG | + | chr7.3:77239663-77239682 | None:intergenic | 30.0% |
| !! | TACTTTGGAATTCTCATTGT+GGG | - | chr7.3:77236822-77236841 | MS.gene92492:intron | 30.0% |
| !! | TCTAACGGAATGTATTTTTG+GGG | + | chr7.3:77240329-77240348 | None:intergenic | 30.0% |
| !! | TGATTCAGGTTGTCAAATAT+TGG | - | chr7.3:77236633-77236652 | MS.gene92492:intron | 30.0% |
| !! | TTGATTTGTGGTTTCTTGTT+TGG | - | chr7.3:77241128-77241147 | MS.gene92492:CDS | 30.0% |
| !!! | GTTGGTTTTCATAAACTTGT+AGG | - | chr7.3:77237549-77237568 | MS.gene92492:CDS | 30.0% |
| !!! | GTTTTTTCAAGTCAAGAGTA+TGG | - | chr7.3:77241156-77241175 | MS.gene92492:CDS | 30.0% |
| AAATACCAGATGCTTATGAG+AGG | - | chr7.3:77240828-77240847 | MS.gene92492:intron | 35.0% | |
| AACAACAAAATACCAGGGTT+AGG | - | chr7.3:77240219-77240238 | MS.gene92492:intron | 35.0% | |
| AACTAAACTATGACCGTGTT+TGG | - | chr7.3:77238551-77238570 | MS.gene92492:intron | 35.0% | |
| AACTGACATGTGTCAAACAT+CGG | - | chr7.3:77237712-77237731 | MS.gene92492:intron | 35.0% | |
| AATAAGTGTGAATGCTGCAA+AGG | + | chr7.3:77239065-77239084 | None:intergenic | 35.0% | |
| AATACTAACCCTCTTTGCAA+TGG | - | chr7.3:77239190-77239209 | MS.gene92492:intron | 35.0% | |
| ACTACATCCTCGAGTTTAAT+CGG | + | chr7.3:77239593-77239612 | None:intergenic | 35.0% | |
| ACTCTAGCATATAAATCCTC+CGG | + | chr7.3:77239395-77239414 | None:intergenic | 35.0% | |
| AGATTGTTTGAAAGAGCTGA+TGG | + | chr7.3:77238765-77238784 | None:intergenic | 35.0% | |
| AGCGAAATTTGAACACACTA+CGG | - | chr7.3:77236518-77236537 | MS.gene92492:intron | 35.0% | |
| ATAGATAATGCAAGATGGGA+TGG | - | chr7.3:77239728-77239747 | MS.gene92492:intron | 35.0% | |
| ATTCCGCTATTTAACAACAC+TGG | + | chr7.3:77236420-77236439 | None:intergenic | 35.0% | |
| CAATAACAGCACAATACTCA+AGG | + | chr7.3:77237434-77237453 | None:intergenic | 35.0% | |
| CAATATAAGAACCACACAAG+AGG | - | chr7.3:77239620-77239639 | MS.gene92492:intron | 35.0% | |
| CTCTTCTATCTCATTCAACA+CGG | + | chr7.3:77240936-77240955 | None:intergenic | 35.0% | |
| CTCTTGTGTGGTTCTTATAT+TGG | + | chr7.3:77239622-77239641 | None:intergenic | 35.0% | |
| CTGAATGAACATGAGGTAAT+TGG | - | chr7.3:77237069-77237088 | MS.gene92492:CDS | 35.0% | |
| GAAATATCTTCTTCTTGGCA+AGG | + | chr7.3:77236102-77236121 | None:intergenic | 35.0% | |
| GATCCAAAAATCTGACATAC+AGG | + | chr7.3:77236777-77236796 | None:intergenic | 35.0% | |
| GATGACAAAACTGTACCAAA+GGG | - | chr7.3:77239668-77239687 | MS.gene92492:intron | 35.0% | |
| GCGCTTAATATATCCAAACA+CGG | + | chr7.3:77238567-77238586 | None:intergenic | 35.0% | |
| GCTCTATAAGACTGAAACAA+AGG | + | chr7.3:77236387-77236406 | None:intergenic | 35.0% | |
| TACCATAAGGATAGTACTCT+GGG | + | chr7.3:77240970-77240989 | None:intergenic | 35.0% | |
| TAGATAATGCAAGATGGGAT+GGG | - | chr7.3:77239729-77239748 | MS.gene92492:intron | 35.0% | |
| TAGCAGCTTGTGAAAATTTG+CGG | - | chr7.3:77239833-77239852 | MS.gene92492:intron | 35.0% | |
| TATTACTCAATGTGGTTCCA+AGG | - | chr7.3:77237120-77237139 | MS.gene92492:intron | 35.0% | |
| TCAAGGAACTTTATGGTACA+AGG | + | chr7.3:77237417-77237436 | None:intergenic | 35.0% | |
| TCCGCAATAGATTATTTAGC+TGG | - | chr7.3:77240641-77240660 | MS.gene92492:intron | 35.0% | |
| TCTTCTATCTCATTCAACAC+GGG | + | chr7.3:77240935-77240954 | None:intergenic | 35.0% | |
| TGAAACAAAGGAGAACAAGT+TGG | + | chr7.3:77236375-77236394 | None:intergenic | 35.0% | |
| TGATGACAAAACTGTACCAA+AGG | - | chr7.3:77239667-77239686 | MS.gene92492:intron | 35.0% | |
| TGATGCAGAACTGAGAAATA+TGG | - | chr7.3:77236303-77236322 | MS.gene92492:CDS | 35.0% | |
| TGCTGGAAATATCTTCTTCT+TGG | + | chr7.3:77236107-77236126 | None:intergenic | 35.0% | |
| TTGCTTCTTGATGCAATTGA+AGG | - | chr7.3:77240851-77240870 | MS.gene92492:CDS | 35.0% | |
| ! | AAACTCGAGGATGTAGTTTT+AGG | - | chr7.3:77239596-77239615 | MS.gene92492:intron | 35.0% |
| ! | AATCCGCGATTGATAACATT+TGG | - | chr7.3:77236549-77236568 | MS.gene92492:intron | 35.0% |
| ! | AATTGAAGACGGTGTTGAAA+AGG | - | chr7.3:77236027-77236046 | MS.gene92492:intron | 35.0% |
| ! | AGTTTTCCGGAGAATCATAT+TGG | + | chr7.3:77237029-77237048 | None:intergenic | 35.0% |
| ! | ATCCGCGATTGATAACATTT+GGG | - | chr7.3:77236550-77236569 | MS.gene92492:intron | 35.0% |
| ! | GTCATTGTTGAAAAGCCTTT+TGG | - | chr7.3:77238449-77238468 | MS.gene92492:intron | 35.0% |
| ! | TAGTAAAGTGCAAAAAGTGC+TGG | + | chr7.3:77236124-77236143 | None:intergenic | 35.0% |
| ! | TCAATTGCTTAATGGATGTC+AGG | - | chr7.3:77239544-77239563 | MS.gene92492:intron | 35.0% |
| ! | TCTTTTTATTAGCAGACACC+TGG | + | chr7.3:77237753-77237772 | None:intergenic | 35.0% |
| ! | TGCTTATATTTAAGGTCGGA+GGG | + | chr7.3:77239317-77239336 | None:intergenic | 35.0% |
| ! | TGTTTATTTCAGGTACTCGA+AGG | - | chr7.3:77240805-77240824 | MS.gene92492:intron | 35.0% |
| !! | ACTTTGGAATTCTCATTGTG+GGG | - | chr7.3:77236823-77236842 | MS.gene92492:intron | 35.0% |
| !! | CAAAAATTGCTTTTGTAGGG+TGG | - | chr7.3:77238317-77238336 | MS.gene92492:intron | 35.0% |
| !! | CTACTTTGGAATTCTCATTG+TGG | - | chr7.3:77236821-77236840 | MS.gene92492:intron | 35.0% |
| !!! | TACCTTTTTTGATGAAGGCA+GGG | - | chr7.3:77239753-77239772 | MS.gene92492:intron | 35.0% |
| !!! | TTTTCTGAAATTCCTTTGGG+TGG | - | chr7.3:77239430-77239449 | MS.gene92492:intron | 35.0% |
| AATGGAAACCCCTGTTAGTT+TGG | - | chr7.3:77239208-77239227 | MS.gene92492:intron | 40.0% | |
| ACCATAAGGATAGTACTCTG+GGG | + | chr7.3:77240969-77240988 | None:intergenic | 40.0% | |
| ACCCCAAATGTTATCAATCG+CGG | + | chr7.3:77236555-77236574 | None:intergenic | 40.0% | |
| ACTGACATGTGTCAAACATC+GGG | - | chr7.3:77237713-77237732 | MS.gene92492:intron | 40.0% | |
| ACTTCGAGCATAACCACAAA+TGG | + | chr7.3:77236275-77236294 | None:intergenic | 40.0% | |
| AGACTAGCAACAACACGTAA+CGG | + | chr7.3:77237970-77237989 | None:intergenic | 40.0% | |
| AGAGAACTGCAGTGAAAAGA+TGG | - | chr7.3:77236969-77236988 | MS.gene92492:CDS | 40.0% | |
| AGATAATGCAAGATGGGATG+GGG | - | chr7.3:77239730-77239749 | MS.gene92492:intron | 40.0% | |
| AGGTTGTCAAATATTGGCCA+TGG | - | chr7.3:77236639-77236658 | MS.gene92492:intron | 40.0% | |
| ATAAAAGTTCAGCCGGATGA+AGG | - | chr7.3:77240180-77240199 | MS.gene92492:CDS | 40.0% | |
| ATCCTTCACAAAATTGGCCA+TGG | + | chr7.3:77236707-77236726 | None:intergenic | 40.0% | |
| ATTGCGGAATGTTGAAGTTG+TGG | + | chr7.3:77240629-77240648 | None:intergenic | 40.0% | |
| CAAGAAGCTGAATGAACATG+AGG | - | chr7.3:77237062-77237081 | MS.gene92492:CDS | 40.0% | |
| CACCAGATAAGGTTCTATGT+GGG | - | chr7.3:77237672-77237691 | MS.gene92492:intron | 40.0% | |
| CTACCATAAGGATAGTACTC+TGG | + | chr7.3:77240971-77240990 | None:intergenic | 40.0% | |
| CTATCTTGGAAAAGAGCTTG+TGG | - | chr7.3:77238909-77238928 | MS.gene92492:intron | 40.0% | |
| CTGCAAAGACCTATCTAATC+TGG | + | chr7.3:77237214-77237233 | None:intergenic | 40.0% | |
| GAGAACATCTCATTATGGCT+TGG | - | chr7.3:77240355-77240374 | MS.gene92492:intron | 40.0% | |
| GATATGGCAGTGCCATATTT+CGG | - | chr7.3:77236751-77236770 | MS.gene92492:intron | 40.0% | |
| GATTCTGAATCACGACCAAA+AGG | + | chr7.3:77238467-77238486 | None:intergenic | 40.0% | |
| TAATCGGTCTCATAGAACGA+AGG | + | chr7.3:77239577-77239596 | None:intergenic | 40.0% | |
| TACAGGATCGATCACTATCT+TGG | - | chr7.3:77238895-77238914 | MS.gene92492:intron | 40.0% | |
| TACCCACATAGAACCTTATC+TGG | + | chr7.3:77237677-77237696 | None:intergenic | 40.0% | |
| TACTATCCTTATGGTAGTCG+TGG | - | chr7.3:77240974-77240993 | MS.gene92492:intron | 40.0% | |
| TAGCAAACCAACGTTGTTGA+TGG | + | chr7.3:77236804-77236823 | None:intergenic | 40.0% | |
| TATAAGAACCACACAAGAGG+AGG | - | chr7.3:77239623-77239642 | MS.gene92492:intron | 40.0% | |
| TATGAGACCGATTAAACTCG+AGG | - | chr7.3:77239583-77239602 | MS.gene92492:intron | 40.0% | |
| TATTCCTCTCACTTACCTCT+TGG | + | chr7.3:77239792-77239811 | None:intergenic | 40.0% | |
| TCTATAACCATGAGTCTCTG+AGG | + | chr7.3:77239480-77239499 | None:intergenic | 40.0% | |
| TGATCTTGTTAAAGCAGCTG+AGG | + | chr7.3:77238489-77238508 | None:intergenic | 40.0% | |
| TTCCCTGCCTTCATCAAAAA+AGG | + | chr7.3:77239758-77239777 | None:intergenic | 40.0% | |
| TTCTGGCCAATATGATTCTC+CGG | - | chr7.3:77237020-77237039 | MS.gene92492:CDS | 40.0% | |
| TTGGGGTTATGGTTTGATTC+AGG | - | chr7.3:77236619-77236638 | MS.gene92492:intron | 40.0% | |
| TTGTCAAATATTGGCCATGG+CGG | - | chr7.3:77236642-77236661 | MS.gene92492:intron | 40.0% | |
| ! | ATGGCCAATTTTGTGAAGGA+TGG | - | chr7.3:77236706-77236725 | MS.gene92492:intron | 40.0% |
| ! | ATTGTCAAAGTACCTACACG+TGG | + | chr7.3:77239129-77239148 | None:intergenic | 40.0% |
| ! | CTGCCAGTGTTGTTAAATAG+CGG | - | chr7.3:77236414-77236433 | MS.gene92492:intron | 40.0% |
| ! | CTGCTTATATTTAAGGTCGG+AGG | + | chr7.3:77239318-77239337 | None:intergenic | 40.0% |
| ! | GAACCTTATCTGGTGCTTTT+TGG | + | chr7.3:77237667-77237686 | None:intergenic | 40.0% |
| ! | GTTTTGTCATCAATGTAGGC+TGG | + | chr7.3:77239659-77239678 | None:intergenic | 40.0% |
| ! | TATCGGCTATTTGAGAACAC+TGG | - | chr7.3:77239995-77240014 | MS.gene92492:intron | 40.0% |
| ! | TCCGCGATTGATAACATTTG+GGG | - | chr7.3:77236551-77236570 | MS.gene92492:intron | 40.0% |
| ! | TCTAGTGCTGCAAAGTTTTC+CGG | + | chr7.3:77237042-77237061 | None:intergenic | 40.0% |
| ! | TGACCGAGGATCAAATTTTC+AGG | - | chr7.3:77238522-77238541 | MS.gene92492:intron | 40.0% |
| ! | TTGCTTAAATTTAAGGCCGG+AGG | - | chr7.3:77239376-77239395 | MS.gene92492:intron | 40.0% |
| ! | TTTTTGAACCTTTGTGGTCG+AGG | - | chr7.3:77238965-77238984 | MS.gene92492:intron | 40.0% |
| !! | ACAACGTTGGTTTGCTACTT+TGG | - | chr7.3:77236807-77236826 | MS.gene92492:intron | 40.0% |
| !! | CTACCAAAAAGCACCAGATA+AGG | - | chr7.3:77237661-77237680 | MS.gene92492:intron | 40.0% |
| !! | CTAGCTCACATGTTGATTTG+TGG | - | chr7.3:77241116-77241135 | MS.gene92492:CDS | 40.0% |
| !! | CTTTGGAATTCTCATTGTGG+GGG | - | chr7.3:77236824-77236843 | MS.gene92492:intron | 40.0% |
| !! | TCAGAAGATTTTGGTACCGA+AGG | - | chr7.3:77239018-77239037 | MS.gene92492:intron | 40.0% |
| !!! | AGATATTGTTGACGGGCTTT+TGG | - | chr7.3:77236674-77236693 | MS.gene92492:intron | 40.0% |
| !!! | CGTGTTGTTGCTAGTCTTTT+TGG | - | chr7.3:77237973-77237992 | MS.gene92492:CDS | 40.0% |
| !!! | GTACCTTTTTTGATGAAGGC+AGG | - | chr7.3:77239752-77239771 | MS.gene92492:intron | 40.0% |
| !!! | TGGGGTACCTTTTTTGATGA+AGG | - | chr7.3:77239748-77239767 | MS.gene92492:intron | 40.0% |
| ACCAGGGTTAGGAATGAAGT+TGG | - | chr7.3:77240230-77240249 | MS.gene92492:intron | 45.0% | |
| AGCAACCTCTCATAAGCATC+TGG | + | chr7.3:77240836-77240855 | None:intergenic | 45.0% | |
| AGGGGTTTCCATTGCAAAGA+GGG | + | chr7.3:77239201-77239220 | None:intergenic | 45.0% | |
| AGTGCAGACTGCCGATATAT+CGG | - | chr7.3:77239978-77239997 | MS.gene92492:intron | 45.0% | |
| ATAACTGTTGTTGGAGCCTC+TGG | - | chr7.3:77236073-77236092 | MS.gene92492:intron | 45.0% | |
| ATGTATTGCCTCGACCACAA+AGG | + | chr7.3:77238976-77238995 | None:intergenic | 45.0% | |
| CAAGCTTGTCAGCATCTTCT+GGG | - | chr7.3:77238408-77238427 | MS.gene92492:intron | 45.0% | |
| CCATGGCAGATATTGTTGAC+GGG | - | chr7.3:77236667-77236686 | MS.gene92492:intron | 45.0% | |
| CCTCTGCATCCAAACTAACA+GGG | + | chr7.3:77239220-77239239 | None:intergenic | 45.0% | |
| CTCTGCATCCAAACTAACAG+GGG | + | chr7.3:77239219-77239238 | None:intergenic | 45.0% | |
| CTGACATACAGGCCGAAATA+TGG | + | chr7.3:77236766-77236785 | None:intergenic | 45.0% | |
| GCAAGATAGTGAGCACAAAC+CGG | + | chr7.3:77241001-77241020 | None:intergenic | 45.0% | |
| GCACCAGATAAGGTTCTATG+TGG | - | chr7.3:77237671-77237690 | MS.gene92492:intron | 45.0% | |
| GCCATGGCAGATATTGTTGA+CGG | - | chr7.3:77236666-77236685 | MS.gene92492:intron | 45.0% | |
| GGTTGAACTAAACCACCCAA+AGG | + | chr7.3:77239445-77239464 | None:intergenic | 45.0% | |
| GGTTTGTGCTCACTATCTTG+CGG | - | chr7.3:77241000-77241019 | MS.gene92492:intron | 45.0% | |
| TCAAGCTTGTCAGCATCTTC+TGG | - | chr7.3:77238407-77238426 | MS.gene92492:intron | 45.0% | |
| TCCAACTTCATTCCTAACCC+TGG | + | chr7.3:77240234-77240253 | None:intergenic | 45.0% | |
| TCCTCTGCATCCAAACTAAC+AGG | + | chr7.3:77239221-77239240 | None:intergenic | 45.0% | |
| TGAATGCTGCAAAGGAAGAG+AGG | + | chr7.3:77239057-77239076 | None:intergenic | 45.0% | |
| TGGCAGCATTTCACCATTTG+TGG | - | chr7.3:77236259-77236278 | MS.gene92492:CDS | 45.0% | |
| TGTGAGCTAGCTAACATCTG+AGG | + | chr7.3:77241106-77241125 | None:intergenic | 45.0% | |
| TGTGGGTAGCATACACATGT+TGG | - | chr7.3:77237689-77237708 | MS.gene92492:intron | 45.0% | |
| TTCCGATTGTACAGATTGCC+CGG | + | chr7.3:77240120-77240139 | None:intergenic | 45.0% | |
| TTGGATTCAGAGCCGAGATA+CGG | - | chr7.3:77240076-77240095 | MS.gene92492:intron | 45.0% | |
| TTTATTAGCAGACACCTGGC+CGG | + | chr7.3:77237749-77237768 | None:intergenic | 45.0% | |
| ! | ACCCCAGAGTACTATCCTTA+TGG | - | chr7.3:77240965-77240984 | MS.gene92492:intron | 45.0% |
| ! | CAAACCAACGTTGTTGATGG+CGG | + | chr7.3:77236801-77236820 | None:intergenic | 45.0% |
| ! | CGGCCTGTATGTCAGATTTT+TGG | - | chr7.3:77236771-77236790 | MS.gene92492:intron | 45.0% |
| ! | GCCAATTTTGTGAAGGATGG+CGG | - | chr7.3:77236709-77236728 | MS.gene92492:intron | 45.0% |
| ! | GCTTAATGGATGTCAGGTCA+AGG | - | chr7.3:77239550-77239569 | MS.gene92492:intron | 45.0% |
| ! | TAACATCTGAGGCTGATCAC+AGG | + | chr7.3:77241095-77241114 | None:intergenic | 45.0% |
| ! | TGCCATGGCCAATTTTGTGA+AGG | - | chr7.3:77236702-77236721 | MS.gene92492:intron | 45.0% |
| ! | TTGTCAGCATCTTCTGGGAA+TGG | - | chr7.3:77238413-77238432 | MS.gene92492:intron | 45.0% |
| !! | GGAAAGCATTACACACCAAG+AGG | - | chr7.3:77239774-77239793 | MS.gene92492:intron | 45.0% |
| !! | ATAAACATTAAAATATTATT+CGG | + | chr7.3:77240792-77240811 | None:intergenic | 5.0% |
| !! | TAAATATTTAAAAAAAAAAG+GGG | + | chr7.3:77238264-77238283 | None:intergenic | 5.0% |
| AACATCGGGACACGCATAAC+CGG | - | chr7.3:77237727-77237746 | MS.gene92492:intron | 50.0% | |
| ACTCAAGCAGTATCTGACCG+AGG | - | chr7.3:77238508-77238527 | MS.gene92492:intron | 50.0% | |
| AGCTATGCCTCAGAGACTCA+TGG | - | chr7.3:77239470-77239489 | MS.gene92492:intron | 50.0% | |
| ATCTCCGCCATCAACAACGT+TGG | - | chr7.3:77236794-77236813 | MS.gene92492:intron | 50.0% | |
| ATGCAACACCTCCTCTTGTG+TGG | + | chr7.3:77239634-77239653 | None:intergenic | 50.0% | |
| ATTCCCGCCACACATGATCA+TGG | - | chr7.3:77240678-77240697 | MS.gene92492:intron | 50.0% | |
| CACACCAAGAGGTAAGTGAG+AGG | - | chr7.3:77239785-77239804 | MS.gene92492:intron | 50.0% | |
| CAGGGGTTTCCATTGCAAAG+AGG | + | chr7.3:77239202-77239221 | None:intergenic | 50.0% | |
| CAGTCTGCACTATATCGTGG+TGG | + | chr7.3:77239969-77239988 | None:intergenic | 50.0% | |
| CCCGTCAACAATATCTGCCA+TGG | + | chr7.3:77236670-77236689 | None:intergenic | 50.0% | |
| CCTGAACTGTACCCGTATCT+CGG | + | chr7.3:77240091-77240110 | None:intergenic | 50.0% | |
| CTACAGCACTGTACGCATAG+CGG | + | chr7.3:77239871-77239890 | None:intergenic | 50.0% | |
| CTATGAGGGTTGTCTGCCTA+AGG | - | chr7.3:77236141-77236160 | MS.gene92492:CDS | 50.0% | |
| GCCAGATACAACGTACGATG+GGG | - | chr7.3:77241022-77241041 | MS.gene92492:intron | 50.0% | |
| GCCGCCATCCTTCACAAAAT+TGG | + | chr7.3:77236713-77236732 | None:intergenic | 50.0% | |
| GGCCAGATACAACGTACGAT+GGG | - | chr7.3:77241021-77241040 | MS.gene92492:intron | 50.0% | |
| GTCAAATGAGCACAAGCACG+TGG | + | chr7.3:77237250-77237269 | None:intergenic | 50.0% | |
| GTGATGAACTCGATGCAGCT+TGG | - | chr7.3:77240897-77240916 | MS.gene92492:CDS | 50.0% | |
| TCCTTATGGTAGTCGTGGTC+CGG | - | chr7.3:77240979-77240998 | MS.gene92492:intron | 50.0% | |
| TGCCGGGCAATCTGTACAAT+CGG | - | chr7.3:77240115-77240134 | MS.gene92492:intron | 50.0% | |
| TGGATTCAGAGCCGAGATAC+GGG | - | chr7.3:77240077-77240096 | MS.gene92492:intron | 50.0% | |
| ! | CATCTTCTGGGAATGGTGGT+TGG | - | chr7.3:77238420-77238439 | MS.gene92492:intron | 50.0% |
| ! | CCCTGTTAGTTTGGATGCAG+AGG | - | chr7.3:77239217-77239236 | MS.gene92492:intron | 50.0% |
| ! | GCACAGTGGAGAGCATACAT+AGG | + | chr7.3:77238135-77238154 | None:intergenic | 50.0% |
| ! | GGTACAGTTCAGGAAAGTGC+CGG | - | chr7.3:77240098-77240117 | MS.gene92492:intron | 50.0% |
| ! | TCAGCATCTTCTGGGAATGG+TGG | - | chr7.3:77238416-77238435 | MS.gene92492:intron | 50.0% |
| !! | GATTTTGGTACCGAAGGACG+TGG | - | chr7.3:77239024-77239043 | MS.gene92492:intron | 50.0% |
| !! | GTACAGTTCAGGAAAGTGCC+GGG | - | chr7.3:77240099-77240118 | MS.gene92492:intron | 50.0% |
| !! | TCTCTGAGGCATAGCTCAAG+TGG | + | chr7.3:77239466-77239485 | None:intergenic | 50.0% |
| AATGAGCACAAGCACGTGGC+AGG | + | chr7.3:77237246-77237265 | None:intergenic | 55.0% | |
| ACCGGACCACGACTACCATA+AGG | + | chr7.3:77240983-77241002 | None:intergenic | 55.0% | |
| ATCTATGAAGAGGGCAGCCG+CGG | + | chr7.3:77239714-77239733 | None:intergenic | 55.0% | |
| CCGAGATACGGGTACAGTTC+AGG | - | chr7.3:77240088-77240107 | MS.gene92492:intron | 55.0% | |
| CGACCATGATCATGTGTGGC+GGG | + | chr7.3:77240684-77240703 | None:intergenic | 55.0% | |
| CGGCAGTCTGCACTATATCG+TGG | + | chr7.3:77239972-77239991 | None:intergenic | 55.0% | |
| CGGCCAGATACAACGTACGA+TGG | - | chr7.3:77241020-77241039 | MS.gene92492:intron | 55.0% | |
| CTTAACCCCGACATTTGCCG+CGG | - | chr7.3:77239694-77239713 | MS.gene92492:intron | 55.0% | |
| CTTCTTGGCAAGGTCTCCAG+AGG | + | chr7.3:77236092-77236111 | None:intergenic | 55.0% | |
| CTTGGCGCCATACTCGGATA+TGG | - | chr7.3:77236735-77236754 | MS.gene92492:intron | 55.0% | |
| GAGGGTTGTCTGCCTAAGGT+TGG | - | chr7.3:77236145-77236164 | MS.gene92492:CDS | 55.0% | |
| GCCCCATCGTACGTTGTATC+TGG | + | chr7.3:77241026-77241045 | None:intergenic | 55.0% | |
| GCGACCATGATCATGTGTGG+CGG | + | chr7.3:77240685-77240704 | None:intergenic | 55.0% | |
| GGCACTGCCATATCCGAGTA+TGG | + | chr7.3:77236745-77236764 | None:intergenic | 55.0% | |
| GGGTCTGCTTGTGTAGTTCG+TGG | - | chr7.3:77236571-77236590 | MS.gene92492:intron | 55.0% | |
| TGCGCGACCATGATCATGTG+TGG | + | chr7.3:77240688-77240707 | None:intergenic | 55.0% | |
| ! | GATCATGTGTGGCGGGAATG+AGG | + | chr7.3:77240677-77240696 | None:intergenic | 55.0% |
| ! | TGTGAAGGATGGCGGCATCT+TGG | - | chr7.3:77236717-77236736 | MS.gene92492:intron | 55.0% |
| ! | TTTGGTACCGAAGGACGTGG+CGG | - | chr7.3:77239027-77239046 | MS.gene92492:intron | 55.0% |
| !!! | GGGCTTTTGGCTTTCTGCCA+TGG | - | chr7.3:77236687-77236706 | MS.gene92492:intron | 55.0% |
| AACGTACGATGGGGCGACCT+TGG | - | chr7.3:77241031-77241050 | MS.gene92492:intron | 60.0% | |
| AGGTTACCCGCCACGTCCTT+CGG | + | chr7.3:77239037-77239056 | None:intergenic | 60.0% | |
| CGGCATCTTGGCGCCATACT+CGG | - | chr7.3:77236729-77236748 | MS.gene92492:intron | 60.0% | |
| GTCGGGGTTAAGCTGCCCTT+TGG | + | chr7.3:77239686-77239705 | None:intergenic | 60.0% | |
| ! | TTGGTACCGAAGGACGTGGC+GGG | - | chr7.3:77239028-77239047 | MS.gene92492:intron | 60.0% |
| AGGGCAGCCGCGGCAAATGT+CGG | + | chr7.3:77239704-77239723 | None:intergenic | 65.0% | |
| TATCTGCCATGGCGCCGCCA+TGG | + | chr7.3:77236659-77236678 | None:intergenic | 65.0% | |
| TATTGGCCATGGCGGCGCCA+TGG | - | chr7.3:77236650-77236669 | MS.gene92492:intron | 65.0% | |
| CGGGACACGCATAACCGGCC+AGG | - | chr7.3:77237732-77237751 | MS.gene92492:intron | 70.0% | |
| GGCAGCCGCGGCAAATGTCG+GGG | + | chr7.3:77239702-77239721 | None:intergenic | 70.0% | |
| GGGCAGCCGCGGCAAATGTC+GGG | + | chr7.3:77239703-77239722 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 77236016 | 77241183 | 77236016 | ID=MS.gene92492 |
| chr7.3 | mRNA | 77236016 | 77241183 | 77236016 | ID=MS.gene92492.t1;Parent=MS.gene92492 |
| chr7.3 | exon | 77241037 | 77241183 | 77241037 | ID=MS.gene92492.t1.exon1;Parent=MS.gene92492.t1 |
| chr7.3 | CDS | 77241037 | 77241183 | 77241037 | ID=cds.MS.gene92492.t1;Parent=MS.gene92492.t1 |
| chr7.3 | exon | 77240840 | 77240934 | 77240840 | ID=MS.gene92492.t1.exon2;Parent=MS.gene92492.t1 |
| chr7.3 | CDS | 77240840 | 77240934 | 77240840 | ID=cds.MS.gene92492.t1;Parent=MS.gene92492.t1 |
| chr7.3 | exon | 77240116 | 77240230 | 77240116 | ID=MS.gene92492.t1.exon3;Parent=MS.gene92492.t1 |
| chr7.3 | CDS | 77240116 | 77240230 | 77240116 | ID=cds.MS.gene92492.t1;Parent=MS.gene92492.t1 |
| chr7.3 | exon | 77238656 | 77238864 | 77238656 | ID=MS.gene92492.t1.exon4;Parent=MS.gene92492.t1 |
| chr7.3 | CDS | 77238656 | 77238864 | 77238656 | ID=cds.MS.gene92492.t1;Parent=MS.gene92492.t1 |
| chr7.3 | exon | 77238150 | 77238299 | 77238150 | ID=MS.gene92492.t1.exon5;Parent=MS.gene92492.t1 |
| chr7.3 | CDS | 77238150 | 77238299 | 77238150 | ID=cds.MS.gene92492.t1;Parent=MS.gene92492.t1 |
| chr7.3 | exon | 77237943 | 77238063 | 77237943 | ID=MS.gene92492.t1.exon6;Parent=MS.gene92492.t1 |
| chr7.3 | CDS | 77237943 | 77238063 | 77237943 | ID=cds.MS.gene92492.t1;Parent=MS.gene92492.t1 |
| chr7.3 | exon | 77237404 | 77237633 | 77237404 | ID=MS.gene92492.t1.exon7;Parent=MS.gene92492.t1 |
| chr7.3 | CDS | 77237404 | 77237633 | 77237404 | ID=cds.MS.gene92492.t1;Parent=MS.gene92492.t1 |
| chr7.3 | exon | 77236913 | 77237113 | 77236913 | ID=MS.gene92492.t1.exon8;Parent=MS.gene92492.t1 |
| chr7.3 | CDS | 77236913 | 77237113 | 77236913 | ID=cds.MS.gene92492.t1;Parent=MS.gene92492.t1 |
| chr7.3 | exon | 77236139 | 77236382 | 77236139 | ID=MS.gene92492.t1.exon9;Parent=MS.gene92492.t1 |
| chr7.3 | CDS | 77236139 | 77236382 | 77236139 | ID=cds.MS.gene92492.t1;Parent=MS.gene92492.t1 |
| chr7.3 | exon | 77236016 | 77236042 | 77236016 | ID=MS.gene92492.t1.exon10;Parent=MS.gene92492.t1 |
| chr7.3 | CDS | 77236016 | 77236042 | 77236016 | ID=cds.MS.gene92492.t1;Parent=MS.gene92492.t1 |
| Gene Sequence |
| Protein sequence |
