Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93157.t1 | XP_013466436.1 | 98.9 | 379 | 4 | 0 | 1 | 379 | 1 | 379 | 2.80E-201 | 711.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93157.t1 | Q8GYX8 | 59.2 | 321 | 124 | 4 | 1 | 315 | 1 | 320 | 1.3e-101 | 371.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93157.t1 | A0A072VFB6 | 98.9 | 379 | 4 | 0 | 1 | 379 | 1 | 379 | 2.0e-201 | 711.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene046974 | MS.gene93157 | PPI |
| MS.gene93157 | MS.gene90510 | PPI |
| MS.gene92388 | MS.gene93157 | PPI |
| MS.gene93157 | MS.gene92387 | PPI |
| MS.gene93157 | MS.gene40413 | PPI |
| MS.gene93157 | MS.gene047628 | PPI |
| MS.gene93157 | MS.gene011817 | PPI |
| MS.gene93157 | MS.gene041083 | PPI |
| MS.gene93157 | MS.gene56778 | PPI |
| MS.gene071680 | MS.gene93157 | PPI |
| MS.gene93157 | MS.gene024992 | PPI |
| MS.gene93157 | MS.gene010354 | PPI |
| MS.gene015154 | MS.gene93157 | PPI |
| MS.gene93157 | MS.gene99200 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93157.t1 | MTR_1g029470 | 98.945 | 379 | 4 | 0 | 1 | 379 | 1 | 379 | 0.0 | 778 |
| MS.gene93157.t1 | MTR_1g029460 | 80.526 | 380 | 69 | 3 | 1 | 379 | 1 | 376 | 0.0 | 609 |
| MS.gene93157.t1 | MTR_8g037810 | 56.688 | 314 | 128 | 2 | 1 | 307 | 1 | 313 | 6.87e-118 | 345 |
| MS.gene93157.t1 | MTR_5g004570 | 64.035 | 228 | 77 | 1 | 1 | 223 | 1 | 228 | 1.63e-105 | 311 |
| MS.gene93157.t1 | MTR_5g004600 | 47.368 | 95 | 48 | 2 | 221 | 313 | 3 | 97 | 9.28e-22 | 91.7 |
| MS.gene93157.t1 | MTR_3g027580 | 48.649 | 74 | 37 | 1 | 6 | 78 | 89 | 162 | 2.94e-14 | 74.3 |
| MS.gene93157.t1 | MTR_2g083920 | 43.662 | 71 | 40 | 0 | 6 | 76 | 70 | 140 | 3.38e-14 | 72.8 |
| MS.gene93157.t1 | MTR_4g080350 | 47.761 | 67 | 35 | 0 | 2 | 68 | 68 | 134 | 6.69e-14 | 72.4 |
| MS.gene93157.t1 | MTR_4g023470 | 53.846 | 65 | 30 | 0 | 7 | 71 | 87 | 151 | 7.67e-14 | 72.8 |
| MS.gene93157.t1 | MTR_2g083920 | 43.662 | 71 | 40 | 0 | 6 | 76 | 70 | 140 | 2.44e-13 | 70.9 |
| MS.gene93157.t1 | MTR_8g006430 | 52.113 | 71 | 30 | 2 | 5 | 75 | 13 | 79 | 5.13e-13 | 70.5 |
| MS.gene93157.t1 | MTR_5g065860 | 42.683 | 82 | 47 | 0 | 1 | 82 | 43 | 124 | 1.42e-12 | 65.1 |
| MS.gene93157.t1 | MTR_5g065160 | 47.143 | 70 | 37 | 0 | 4 | 73 | 81 | 150 | 2.31e-12 | 68.6 |
| MS.gene93157.t1 | MTR_5g065160 | 47.143 | 70 | 37 | 0 | 4 | 73 | 74 | 143 | 2.36e-12 | 68.6 |
| MS.gene93157.t1 | MTR_7g109340 | 47.887 | 71 | 37 | 0 | 7 | 77 | 27 | 97 | 2.64e-12 | 67.8 |
| MS.gene93157.t1 | MTR_5g065160 | 47.143 | 70 | 37 | 0 | 4 | 73 | 80 | 149 | 3.13e-12 | 68.2 |
| MS.gene93157.t1 | MTR_5g065160 | 47.143 | 70 | 37 | 0 | 4 | 73 | 81 | 150 | 3.22e-12 | 68.2 |
| MS.gene93157.t1 | MTR_2g014480 | 45.070 | 71 | 38 | 1 | 6 | 75 | 4 | 74 | 1.06e-11 | 65.9 |
| MS.gene93157.t1 | MTR_5g035770 | 40.426 | 94 | 47 | 2 | 8 | 92 | 27 | 120 | 1.50e-11 | 65.9 |
| MS.gene93157.t1 | MTR_1g110310 | 39.726 | 73 | 44 | 0 | 8 | 80 | 18 | 90 | 1.88e-11 | 65.5 |
| MS.gene93157.t1 | MTR_4g023490 | 50.000 | 66 | 32 | 1 | 6 | 71 | 16 | 80 | 8.87e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93157.t1 | AT1G77020 | 70.573 | 384 | 103 | 5 | 1 | 379 | 1 | 379 | 0.0 | 539 |
| MS.gene93157.t1 | AT1G76700 | 55.932 | 354 | 141 | 6 | 1 | 340 | 1 | 353 | 7.89e-133 | 386 |
| MS.gene93157.t1 | AT1G21080 | 56.495 | 331 | 127 | 6 | 1 | 325 | 1 | 320 | 7.91e-130 | 378 |
| MS.gene93157.t1 | AT1G21080 | 52.909 | 361 | 155 | 6 | 1 | 348 | 1 | 359 | 8.03e-130 | 378 |
| MS.gene93157.t1 | AT2G21510 | 51.884 | 345 | 155 | 3 | 1 | 334 | 1 | 345 | 5.70e-116 | 341 |
| MS.gene93157.t1 | AT2G21510 | 51.884 | 345 | 155 | 3 | 1 | 334 | 1 | 345 | 5.70e-116 | 341 |
| MS.gene93157.t1 | AT2G21510 | 51.420 | 352 | 153 | 4 | 1 | 334 | 1 | 352 | 3.68e-115 | 339 |
| MS.gene93157.t1 | AT2G21510 | 51.420 | 352 | 153 | 4 | 1 | 334 | 1 | 352 | 3.68e-115 | 339 |
| MS.gene93157.t1 | AT2G21510 | 54.921 | 315 | 134 | 2 | 1 | 307 | 1 | 315 | 2.83e-114 | 336 |
| MS.gene93157.t1 | AT4G39150 | 55.096 | 314 | 133 | 2 | 1 | 307 | 1 | 313 | 3.74e-113 | 334 |
| MS.gene93157.t1 | AT4G39150 | 55.096 | 314 | 133 | 2 | 1 | 307 | 1 | 313 | 3.74e-113 | 334 |
| MS.gene93157.t1 | AT4G39150 | 55.096 | 314 | 133 | 2 | 1 | 307 | 1 | 313 | 3.74e-113 | 334 |
| MS.gene93157.t1 | AT1G21080 | 48.352 | 273 | 127 | 5 | 89 | 348 | 1 | 272 | 6.61e-80 | 248 |
| MS.gene93157.t1 | AT1G28210 | 47.619 | 63 | 33 | 0 | 7 | 69 | 49 | 111 | 2.22e-13 | 71.2 |
| MS.gene93157.t1 | AT1G28210 | 47.619 | 63 | 33 | 0 | 7 | 69 | 49 | 111 | 2.34e-13 | 71.2 |
| MS.gene93157.t1 | AT1G28210 | 47.619 | 63 | 33 | 0 | 7 | 69 | 49 | 111 | 2.61e-13 | 71.2 |
| MS.gene93157.t1 | AT5G48030 | 48.485 | 66 | 34 | 0 | 6 | 71 | 94 | 159 | 3.16e-13 | 71.2 |
| MS.gene93157.t1 | AT2G42750 | 39.744 | 78 | 44 | 1 | 6 | 83 | 76 | 150 | 1.97e-12 | 68.2 |
| MS.gene93157.t1 | AT1G71000 | 47.887 | 71 | 32 | 2 | 2 | 68 | 5 | 74 | 2.74e-12 | 65.1 |
| MS.gene93157.t1 | AT1G59980 | 42.254 | 71 | 41 | 0 | 8 | 78 | 25 | 95 | 5.37e-12 | 67.0 |
| MS.gene93157.t1 | AT1G59980 | 42.254 | 71 | 41 | 0 | 8 | 78 | 25 | 95 | 5.95e-12 | 67.0 |
| MS.gene93157.t1 | AT1G71000 | 47.887 | 71 | 32 | 2 | 2 | 68 | 5 | 74 | 1.13e-11 | 63.2 |
| MS.gene93157.t1 | AT2G33735 | 42.188 | 64 | 37 | 0 | 6 | 69 | 22 | 85 | 1.61e-11 | 61.6 |
| MS.gene93157.t1 | AT2G33735 | 42.188 | 64 | 37 | 0 | 6 | 69 | 22 | 85 | 1.61e-11 | 61.6 |
| MS.gene93157.t1 | AT5G16650 | 39.024 | 82 | 50 | 0 | 6 | 87 | 11 | 92 | 2.79e-11 | 62.0 |
| MS.gene93157.t1 | AT5G16650 | 39.024 | 82 | 50 | 0 | 6 | 87 | 11 | 92 | 2.82e-11 | 61.2 |
| MS.gene93157.t1 | AT5G25530 | 37.383 | 107 | 51 | 3 | 6 | 96 | 4 | 110 | 5.19e-11 | 63.9 |
| MS.gene93157.t1 | AT1G80030 | 33.557 | 149 | 90 | 4 | 6 | 154 | 75 | 214 | 6.95e-11 | 63.9 |
| MS.gene93157.t1 | AT1G80030 | 33.557 | 149 | 90 | 4 | 6 | 154 | 75 | 214 | 6.95e-11 | 63.9 |
| MS.gene93157.t1 | AT1G80030 | 33.557 | 149 | 90 | 4 | 6 | 154 | 75 | 214 | 6.95e-11 | 63.9 |
| MS.gene93157.t1 | AT5G06910 | 44.118 | 68 | 38 | 0 | 4 | 71 | 27 | 94 | 6.96e-11 | 62.8 |
| MS.gene93157.t1 | AT3G62600 | 42.254 | 71 | 41 | 0 | 7 | 77 | 27 | 97 | 7.20e-11 | 63.5 |
| MS.gene93157.t1 | AT1G80030 | 33.557 | 149 | 90 | 4 | 6 | 154 | 75 | 214 | 8.65e-11 | 63.9 |
Find 73 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTATCTTGGAGTTCCATTTC+TGG | 0.127930 | 1.3:+15428253 | MS.gene93157:CDS |
| CTACCGTACCTGATTGAAAA+AGG | 0.228729 | 1.3:-15429963 | None:intergenic |
| TGTCTTTATTAAGACGAATA+TGG | 0.236894 | 1.3:-15428532 | None:intergenic |
| AATTCTCGGGAAGATATTTC+AGG | 0.289497 | 1.3:+15429062 | MS.gene93157:CDS |
| AGCACAGGAACTAGGGAAAA+AGG | 0.311312 | 1.3:+15428226 | MS.gene93157:CDS |
| TGGAATTTGTGTGCAGCATT+AGG | 0.313416 | 1.3:-15426258 | None:intergenic |
| GCTGAATGGGTTCGCAATAA+AGG | 0.328906 | 1.3:+15428275 | MS.gene93157:CDS |
| GAGTTCCATTTCTGGCTGAA+TGG | 0.340162 | 1.3:+15428261 | MS.gene93157:CDS |
| GAAATGGAACTCCAAGATAA+AGG | 0.345943 | 1.3:-15428250 | None:intergenic |
| TCAAAATAGGAAGTCCAAAA+AGG | 0.348995 | 1.3:+15427637 | MS.gene93157:intron |
| AGGAATGGATATGATCGAAA+TGG | 0.352486 | 1.3:+15426407 | MS.gene93157:CDS |
| TGATGAAAGTGAGGATTTGC+AGG | 0.359038 | 1.3:+15427372 | MS.gene93157:CDS |
| GGATTTGCAGGAGAAGTTAA+AGG | 0.365646 | 1.3:+15427384 | MS.gene93157:CDS |
| TTTGGTCACCACGAACATAT+TGG | 0.369189 | 1.3:-15427702 | None:intergenic |
| CGCGCTGGTAGAAACCCTTT+TGG | 0.371483 | 1.3:-15427720 | None:intergenic |
| GTGCAGCATTAGGATCGTTT+TGG | 0.388129 | 1.3:-15426248 | None:intergenic |
| AGTTCCATTTCTGGCTGAAT+GGG | 0.388274 | 1.3:+15428262 | MS.gene93157:CDS |
| TCATATCCATTCCTTTGTAC+TGG | 0.423796 | 1.3:-15426398 | None:intergenic |
| CGAACCCATTCAGCCAGAAA+TGG | 0.425167 | 1.3:-15428266 | None:intergenic |
| GTCTTTATTAAGACGAATAT+GGG | 0.438825 | 1.3:-15428531 | None:intergenic |
| TTTCAGGAAAAGAATGCAAA+AGG | 0.444830 | 1.3:+15429836 | MS.gene93157:intron |
| AAATGGAACTCCAAGATAAA+GGG | 0.456731 | 1.3:-15428249 | None:intergenic |
| TAATGCTGCACACAAATTCC+AGG | 0.460271 | 1.3:+15426260 | MS.gene93157:CDS |
| ATATGTTCGTGGTGACCAAA+AGG | 0.460781 | 1.3:+15427705 | MS.gene93157:CDS |
| ATGGGAAACATTCTGTATCT+AGG | 0.465044 | 1.3:+15426426 | MS.gene93157:CDS |
| AGACAAGCAGCACAGGAACT+AGG | 0.477440 | 1.3:+15428218 | MS.gene93157:CDS |
| GGAATGGATATGATCGAAAT+GGG | 0.483252 | 1.3:+15426408 | MS.gene93157:CDS |
| GCTACCGCTCTTAAAATTCT+CGG | 0.483546 | 1.3:+15429048 | MS.gene93157:CDS |
| TTCTAAAGGAAAATAATGTT+AGG | 0.486828 | 1.3:+15429004 | MS.gene93157:CDS |
| GGAAAATAATGTTAGGAGAG+AGG | 0.492937 | 1.3:+15429011 | MS.gene93157:CDS |
| GCAAGACGGCTTTCTCATGC+AGG | 0.493184 | 1.3:+15427754 | MS.gene93157:CDS |
| GCATCTAGCTGTTGCATCGA+TGG | 0.501658 | 1.3:+15427333 | MS.gene93157:CDS |
| AGCAAGGCAAACACAGCCAT+TGG | 0.501982 | 1.3:-15427277 | None:intergenic |
| CTACCGCTCTTAAAATTCTC+GGG | 0.502656 | 1.3:+15429049 | MS.gene93157:CDS |
| TGCTTCTGCAGGGTATCGGT+AGG | 0.511320 | 1.3:+15430071 | MS.gene93157:intron |
| ACTGAGTATTACGATATCCT+TGG | 0.512010 | 1.3:+15426023 | MS.gene93157:CDS |
| GACAAGCAGCACAGGAACTA+GGG | 0.525424 | 1.3:+15428219 | MS.gene93157:CDS |
| TTGCTTCAGATTCTGCGCGC+TGG | 0.526941 | 1.3:-15427735 | None:intergenic |
| TCGATGGCTTCTTCTGAACT+AGG | 0.528655 | 1.3:+15427349 | MS.gene93157:CDS |
| TATGTTCGTGGTGACCAAAA+GGG | 0.536186 | 1.3:+15427706 | MS.gene93157:CDS |
| AGAAACTATGCTTGATCCAA+TGG | 0.538193 | 1.3:+15427261 | MS.gene93157:CDS |
| TTTCTGCTTCTGCAGGGTAT+CGG | 0.538796 | 1.3:+15430067 | MS.gene93157:intron |
| TTTCTCAGCCAATATGTTCG+TGG | 0.539385 | 1.3:+15427694 | MS.gene93157:CDS |
| CCATTTGACACACGTGTGCA+AGG | 0.540263 | 1.3:-15428604 | None:intergenic |
| CCTTGCACACGTGTGTCAAA+TGG | 0.542422 | 1.3:+15428604 | MS.gene93157:CDS |
| AATTGTTTGAGGACTACGTT+GGG | 0.542530 | 1.3:+15427311 | MS.gene93157:CDS |
| TCACAGTTAACAGCTGCTAA+AGG | 0.543933 | 1.3:+15428311 | MS.gene93157:CDS |
| AAAGCTAGCAAGATTTCTGA+AGG | 0.557903 | 1.3:+15427669 | MS.gene93157:CDS |
| TTGTAATCCCGCATTTGATG+TGG | 0.559168 | 1.3:+15430108 | MS.gene93157:CDS |
| TCATCATCCACATCAAATGC+GGG | 0.564111 | 1.3:-15430115 | None:intergenic |
| AGCAAGACATTTAAAACTAG+TGG | 0.564871 | 1.3:+15428485 | MS.gene93157:CDS |
| AGTGATCCAGTACAAAGGAA+TGG | 0.575083 | 1.3:+15426392 | MS.gene93157:CDS |
| TTCATCATCCACATCAAATG+CGG | 0.576696 | 1.3:-15430116 | None:intergenic |
| ATACTCAAGACAAGCAGCAC+AGG | 0.580317 | 1.3:+15428211 | MS.gene93157:CDS |
| AGCTTTGCGAATTTGATCAT+CGG | 0.582814 | 1.3:-15426063 | None:intergenic |
| CATTTGACACACGTGTGCAA+GGG | 0.593903 | 1.3:-15428603 | None:intergenic |
| ACACTTTGTTGAATTCCTTG+TGG | 0.595314 | 1.3:+15428552 | MS.gene93157:CDS |
| ATTTGATCATCGGAAGCAGA+AGG | 0.597784 | 1.3:-15426053 | None:intergenic |
| CAATCGGTGAACAATGGTGA+AGG | 0.600934 | 1.3:+15425998 | None:intergenic |
| TGAACTAGGTGATGAAAGTG+AGG | 0.618771 | 1.3:+15427363 | MS.gene93157:CDS |
| GTTGACATGTTACATACCAT+CGG | 0.620443 | 1.3:+15428182 | MS.gene93157:CDS |
| CATCAAATGCGGGATTACAA+AGG | 0.620613 | 1.3:-15430105 | None:intergenic |
| TCGCAAAGCTTATTACCACA+AGG | 0.621476 | 1.3:+15426076 | MS.gene93157:CDS |
| GTACTGGATCACTCAAAACC+TGG | 0.623501 | 1.3:-15426382 | None:intergenic |
| ATGTAACATGTCAACTCCAA+AGG | 0.625451 | 1.3:-15428174 | None:intergenic |
| GAATTGTTTGAGGACTACGT+TGG | 0.628017 | 1.3:+15427310 | MS.gene93157:CDS |
| ATTTGATGTGGATGATGAAG+AGG | 0.632418 | 1.3:+15430120 | MS.gene93157:CDS |
| AAGCAGAAGGAGAAACTCCA+AGG | 0.632839 | 1.3:-15426040 | None:intergenic |
| TCTTGAGTATATATAGCCGA+TGG | 0.634847 | 1.3:-15428198 | None:intergenic |
| CTTGTGGAAGTTGAATGTAG+TGG | 0.643037 | 1.3:+15428568 | MS.gene93157:CDS |
| CACTACATTCAACTTCCACA+AGG | 0.647745 | 1.3:-15428567 | None:intergenic |
| GCGCAGAATCTGAAGCAAGA+CGG | 0.650712 | 1.3:+15427740 | MS.gene93157:CDS |
| GCTGTTGATTCTGATGACGA+AGG | 0.696678 | 1.3:+15429881 | MS.gene93157:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATATTAATGTATTATTATA+TGG | + | chr1.3:15427226-15427245 | MS.gene93157:intron | 10.0% |
| !! | TAATATAAATTATCAAATAG+CGG | + | chr1.3:15429533-15429552 | MS.gene93157:intron | 10.0% |
| !!! | TTTTATGAATTTTACATAAT+GGG | + | chr1.3:15427609-15427628 | MS.gene93157:intron | 10.0% |
| !!! | TTTTTATGAATTTTACATAA+TGG | + | chr1.3:15427608-15427627 | MS.gene93157:intron | 10.0% |
| !! | AAAGAAAATATCAAAAAGTA+AGG | + | chr1.3:15427581-15427600 | MS.gene93157:intron | 15.0% |
| !! | AGAAAGAAAAATCATAAAAT+CGG | + | chr1.3:15429250-15429269 | MS.gene93157:intron | 15.0% |
| !! | ATATATGATATGATAAAACA+CGG | + | chr1.3:15428650-15428669 | MS.gene93157:intron | 15.0% |
| !! | ATATTTACATATTTGTGTAA+TGG | - | chr1.3:15430048-15430067 | None:intergenic | 15.0% |
| !! | ATTTATAGTTTAAACCAAAA+TGG | - | chr1.3:15429287-15429306 | None:intergenic | 15.0% |
| !! | TTAAATAAATAAAGTAGCAT+TGG | - | chr1.3:15426463-15426482 | None:intergenic | 15.0% |
| !! | AAAAAGAGAAAAAGAAAACT+AGG | + | chr1.3:15427132-15427151 | MS.gene93157:intron | 20.0% |
| !! | AAATTATTACATCTTTGTGT+CGG | + | chr1.3:15426637-15426656 | MS.gene93157:intron | 20.0% |
| !! | AATTATATAAAAGAACCTTG+TGG | - | chr1.3:15426094-15426113 | None:intergenic | 20.0% |
| !! | ACTGTATATAAAATGTTTGA+AGG | + | chr1.3:15426715-15426734 | MS.gene93157:intron | 20.0% |
| !! | ATATAAAATGTTTGAAGGAT+TGG | + | chr1.3:15426720-15426739 | MS.gene93157:intron | 20.0% |
| !! | TAATATAAAGAAACAATCAC+TGG | - | chr1.3:15429142-15429161 | None:intergenic | 20.0% |
| !! | TTCAATTATATAGACATTAG+TGG | - | chr1.3:15427954-15427973 | None:intergenic | 20.0% |
| !!! | ATTATGTTATTGGTAGATTT+TGG | + | chr1.3:15426349-15426368 | MS.gene93157:intron | 20.0% |
| !!! | CTCTTTTTCTATTCATTTTA+AGG | - | chr1.3:15427120-15427139 | None:intergenic | 20.0% |
| !!! | TTATGTTATTGGTAGATTTT+GGG | + | chr1.3:15426350-15426369 | MS.gene93157:intron | 20.0% |
| !!! | TTCTAAAGGAAAATAATGTT+AGG | + | chr1.3:15429004-15429023 | MS.gene93157:CDS | 20.0% |
| ! | AAATAAATGGAATCTAGTTG+TGG | - | chr1.3:15429176-15429195 | None:intergenic | 25.0% |
| ! | AAGATTTGGACGTTAAATTT+CGG | - | chr1.3:15429649-15429668 | None:intergenic | 25.0% |
| ! | ACAACTAGATTCCATTTATT+TGG | + | chr1.3:15429175-15429194 | MS.gene93157:intron | 25.0% |
| ! | ACGTTAAATTTCGGTAAATT+TGG | - | chr1.3:15429640-15429659 | None:intergenic | 25.0% |
| ! | AGCATAATATAGGAAATGAA+AGG | + | chr1.3:15428942-15428961 | MS.gene93157:intron | 25.0% |
| ! | ATAAGAAGAAACTGACATTA+AGG | - | chr1.3:15428376-15428395 | None:intergenic | 25.0% |
| ! | ATACACTTTCTTATTGTTAC+AGG | + | chr1.3:15426200-15426219 | MS.gene93157:intron | 25.0% |
| ! | ATATTGTGCACATATGATTT+AGG | + | chr1.3:15428428-15428447 | MS.gene93157:intron | 25.0% |
| ! | ATCTTTCATCAAAGATTGAT+AGG | - | chr1.3:15429322-15429341 | None:intergenic | 25.0% |
| ! | GAGGTTTATTTGTATATTCA+AGG | + | chr1.3:15427491-15427510 | MS.gene93157:intron | 25.0% |
| ! | GCATAATATAGGAAATGAAA+GGG | + | chr1.3:15428943-15428962 | MS.gene93157:intron | 25.0% |
| ! | GTCTTTATTAAGACGAATAT+GGG | - | chr1.3:15428534-15428553 | None:intergenic | 25.0% |
| ! | TAAGAAGAAACTGACATTAA+GGG | - | chr1.3:15428375-15428394 | None:intergenic | 25.0% |
| ! | TAATGTCAGTTTCTTCTTAT+TGG | + | chr1.3:15428376-15428395 | MS.gene93157:intron | 25.0% |
| ! | TATGGTAAAGATAGAAGATT+TGG | - | chr1.3:15429663-15429682 | None:intergenic | 25.0% |
| ! | TCAATCTTTGATGAAAGATA+AGG | + | chr1.3:15429323-15429342 | MS.gene93157:intron | 25.0% |
| ! | TGTCTTTATTAAGACGAATA+TGG | - | chr1.3:15428535-15428554 | None:intergenic | 25.0% |
| ! | TTGCTATATTTCTTCAGTTA+CGG | + | chr1.3:15427186-15427205 | MS.gene93157:intron | 25.0% |
| ! | TTTCATTTCCTATATTATGC+TGG | - | chr1.3:15428943-15428962 | None:intergenic | 25.0% |
| ! | TTTCTTAATAAGAGAAACTG+TGG | - | chr1.3:15427564-15427583 | None:intergenic | 25.0% |
| !! | AATGCTGCTATTTATTAACT+TGG | - | chr1.3:15429463-15429482 | None:intergenic | 25.0% |
| !! | CTATTTATTAACTTGGAATG+TGG | - | chr1.3:15429456-15429475 | None:intergenic | 25.0% |
| !! | GATTTTTCTTTCTCATCTAA+CGG | - | chr1.3:15429243-15429262 | None:intergenic | 25.0% |
| !! | GTAAATTTGGTGATTGTTAA+TGG | - | chr1.3:15429627-15429646 | None:intergenic | 25.0% |
| !! | TTCATGCAGTTTAAAATTTC+AGG | - | chr1.3:15427891-15427910 | None:intergenic | 25.0% |
| !! | TTTTCCTCTATTAACTGATA+AGG | + | chr1.3:15429802-15429821 | MS.gene93157:intron | 25.0% |
| !!! | AACAAAAAAGCATGACATTT+TGG | + | chr1.3:15429410-15429429 | MS.gene93157:intron | 25.0% |
| !!! | ATTTTAAGGAATTCGTATTC+TGG | - | chr1.3:15427106-15427125 | None:intergenic | 25.0% |
| AAATGGAACTCCAAGATAAA+GGG | - | chr1.3:15428252-15428271 | None:intergenic | 30.0% | |
| AATAAGAGAAACTGTGGAAT+TGG | - | chr1.3:15427558-15427577 | None:intergenic | 30.0% | |
| AATTCTACGTGCATTTATTG+GGG | + | chr1.3:15427783-15427802 | MS.gene93157:intron | 30.0% | |
| ACCTTATAGTTTCATACCAA+TGG | - | chr1.3:15428802-15428821 | None:intergenic | 30.0% | |
| ACTGAAGAAATATAGCAATG+TGG | - | chr1.3:15427184-15427203 | None:intergenic | 30.0% | |
| AGGATCTAAGTCCAAATAAA+TGG | - | chr1.3:15429189-15429208 | None:intergenic | 30.0% | |
| ATTGAGATCTGGTGAAAAAT+TGG | + | chr1.3:15429354-15429373 | MS.gene93157:intron | 30.0% | |
| CAATTATATGCAATTGTGCT+TGG | - | chr1.3:15427809-15427828 | None:intergenic | 30.0% | |
| GAACCAAAACAAAATCAGAA+AGG | - | chr1.3:15426942-15426961 | None:intergenic | 30.0% | |
| GAATCTAGTTGTGGATAATA+AGG | - | chr1.3:15429167-15429186 | None:intergenic | 30.0% | |
| GAATTCTACGTGCATTTATT+GGG | + | chr1.3:15427782-15427801 | MS.gene93157:intron | 30.0% | |
| GACAAGTATTTAGTGTGTTA+TGG | - | chr1.3:15429681-15429700 | None:intergenic | 30.0% | |
| GTTATAGACTCTATTTGACA+TGG | - | chr1.3:15428018-15428037 | None:intergenic | 30.0% | |
| TAGATATTGAATGCAACACA+TGG | + | chr1.3:15427836-15427855 | MS.gene93157:intron | 30.0% | |
| TATAGCATGTTACTGTATCA+AGG | + | chr1.3:15427986-15428005 | MS.gene93157:intron | 30.0% | |
| TATGAGAACCAGCATAATAT+AGG | + | chr1.3:15428932-15428951 | MS.gene93157:intron | 30.0% | |
| TCAAAATAGGAAGTCCAAAA+AGG | + | chr1.3:15427637-15427656 | MS.gene93157:intron | 30.0% | |
| TGAATTCTACGTGCATTTAT+TGG | + | chr1.3:15427781-15427800 | MS.gene93157:intron | 30.0% | |
| TGTAGACTGTATTATTAAGC+CGG | - | chr1.3:15429218-15429237 | None:intergenic | 30.0% | |
| TTAAGAAGTCTTGCATCTAT+AGG | - | chr1.3:15429603-15429622 | None:intergenic | 30.0% | |
| TTTCAGGAAAAGAATGCAAA+AGG | + | chr1.3:15429836-15429855 | MS.gene93157:intron | 30.0% | |
| ! | ACTCATAACTCTTTTATTGC+AGG | + | chr1.3:15428981-15429000 | MS.gene93157:intron | 30.0% |
| ! | AGCAAGACATTTAAAACTAG+TGG | + | chr1.3:15428485-15428504 | MS.gene93157:CDS | 30.0% |
| ! | GAAAAGAAAACTCGTTGTTT+TGG | + | chr1.3:15427469-15427488 | MS.gene93157:intron | 30.0% |
| ! | GTTTAAAATTTCAGGAAGAG+AGG | - | chr1.3:15427883-15427902 | None:intergenic | 30.0% |
| ! | TAAATATTTCTGCTTCTGCA+GGG | + | chr1.3:15430061-15430080 | MS.gene93157:intron | 30.0% |
| ! | TTCGCAATAAAGGACATTTT+TGG | + | chr1.3:15428285-15428304 | MS.gene93157:CDS | 30.0% |
| !! | ACAATGACACTTTTGATTGA+AGG | + | chr1.3:15426555-15426574 | MS.gene93157:intron | 30.0% |
| !! | ATAATGGGTTGCTTCAAAAT+AGG | + | chr1.3:15427624-15427643 | MS.gene93157:intron | 30.0% |
| !! | TAGCCTTTCTGATTTTGTTT+TGG | + | chr1.3:15426936-15426955 | MS.gene93157:intron | 30.0% |
| !! | TCTTTTATTGCAGGTTCTAA+AGG | + | chr1.3:15428990-15429009 | MS.gene93157:intron | 30.0% |
| !! | TTTTGGAAGTGAATTGTTTG+AGG | + | chr1.3:15427300-15427319 | MS.gene93157:CDS | 30.0% |
| AAAGCTAGCAAGATTTCTGA+AGG | + | chr1.3:15427669-15427688 | MS.gene93157:CDS | 35.0% | |
| AAGAAACTGACATTAAGGGA+GGG | - | chr1.3:15428371-15428390 | None:intergenic | 35.0% | |
| AATAGGAAGTCCAAAAAGGA+AGG | + | chr1.3:15427641-15427660 | MS.gene93157:intron | 35.0% | |
| AATTCTCGGGAAGATATTTC+AGG | + | chr1.3:15429062-15429081 | MS.gene93157:CDS | 35.0% | |
| AATTGTTTGAGGACTACGTT+GGG | + | chr1.3:15427311-15427330 | MS.gene93157:CDS | 35.0% | |
| ACACATGGAATTTCAAAGCT+TGG | + | chr1.3:15427851-15427870 | MS.gene93157:intron | 35.0% | |
| ACACTTTGTTGAATTCCTTG+TGG | + | chr1.3:15428552-15428571 | MS.gene93157:CDS | 35.0% | |
| ACTGAGTATTACGATATCCT+TGG | + | chr1.3:15426023-15426042 | MS.gene93157:CDS | 35.0% | |
| AGAAACTATGCTTGATCCAA+TGG | + | chr1.3:15427261-15427280 | MS.gene93157:CDS | 35.0% | |
| AGCTTTGCGAATTTGATCAT+CGG | - | chr1.3:15426066-15426085 | None:intergenic | 35.0% | |
| AGGAATGGATATGATCGAAA+TGG | + | chr1.3:15426407-15426426 | MS.gene93157:CDS | 35.0% | |
| ATAGGAAGTCCAAAAAGGAA+GGG | + | chr1.3:15427642-15427661 | MS.gene93157:intron | 35.0% | |
| ATAGTGTAACTAGTAGTACC+TGG | - | chr1.3:15426281-15426300 | None:intergenic | 35.0% | |
| ATGGGAAACATTCTGTATCT+AGG | + | chr1.3:15426426-15426445 | MS.gene93157:CDS | 35.0% | |
| ATGTAACATGTCAACTCCAA+AGG | - | chr1.3:15428177-15428196 | None:intergenic | 35.0% | |
| ATTGAAAAAGGGAGTTCGAT+AGG | - | chr1.3:15429954-15429973 | None:intergenic | 35.0% | |
| ATTTGATGTGGATGATGAAG+AGG | + | chr1.3:15430120-15430139 | MS.gene93157:CDS | 35.0% | |
| CAATTCACTTCCAAAAAGCA+AGG | - | chr1.3:15427296-15427315 | None:intergenic | 35.0% | |
| CACAACACAAACATCTAATG+TGG | + | chr1.3:15427045-15427064 | MS.gene93157:intron | 35.0% | |
| CACATTAGATGTTTGTGTTG+TGG | - | chr1.3:15427047-15427066 | None:intergenic | 35.0% | |
| CTACTAAAGATCGGAAAGTT+AGG | - | chr1.3:15429119-15429138 | None:intergenic | 35.0% | |
| GAAATGGAACTCCAAGATAA+AGG | - | chr1.3:15428253-15428272 | None:intergenic | 35.0% | |
| GCATGAACTATGTCAAATAG+AGG | + | chr1.3:15427904-15427923 | MS.gene93157:intron | 35.0% | |
| GCCATTGGTATGAAACTATA+AGG | + | chr1.3:15428798-15428817 | MS.gene93157:intron | 35.0% | |
| GGAAAATAATGTTAGGAGAG+AGG | + | chr1.3:15429011-15429030 | MS.gene93157:CDS | 35.0% | |
| GGAATGGATATGATCGAAAT+GGG | + | chr1.3:15426408-15426427 | MS.gene93157:CDS | 35.0% | |
| GTCAAATAGAGGCTATAACT+CGG | + | chr1.3:15427915-15427934 | MS.gene93157:intron | 35.0% | |
| GTCTAAGTCACAATTCTACT+TGG | + | chr1.3:15426881-15426900 | MS.gene93157:intron | 35.0% | |
| GTTGACATGTTACATACCAT+CGG | + | chr1.3:15428182-15428201 | MS.gene93157:CDS | 35.0% | |
| TAAGTAGTTGATCAGCAAAC+AGG | + | chr1.3:15428701-15428720 | MS.gene93157:intron | 35.0% | |
| TACCGTACCTGATTGAAAAA+GGG | - | chr1.3:15429965-15429984 | None:intergenic | 35.0% | |
| TCATATCCATTCCTTTGTAC+TGG | - | chr1.3:15426401-15426420 | None:intergenic | 35.0% | |
| TCTTGAGTATATATAGCCGA+TGG | - | chr1.3:15428201-15428220 | None:intergenic | 35.0% | |
| TTATCTTGGAGTTCCATTTC+TGG | + | chr1.3:15428253-15428272 | MS.gene93157:CDS | 35.0% | |
| TTCATCATCCACATCAAATG+CGG | - | chr1.3:15430119-15430138 | None:intergenic | 35.0% | |
| TTTCAAACATAGTAGTTGCC+TGG | + | chr1.3:15429387-15429406 | MS.gene93157:intron | 35.0% | |
| ! | AACAGCTGCTAAAGGTATAA+TGG | + | chr1.3:15428319-15428338 | MS.gene93157:intron | 35.0% |
| ! | AATCACTGGCTACTAAAGAT+CGG | - | chr1.3:15429128-15429147 | None:intergenic | 35.0% |
| ! | ATATGGGAGTCAACATTTTC+AGG | - | chr1.3:15428518-15428537 | None:intergenic | 35.0% |
| ! | GTAAATATTTCTGCTTCTGC+AGG | + | chr1.3:15430060-15430079 | MS.gene93157:intron | 35.0% |
| ! | TATGGGAGTCAACATTTTCA+GGG | - | chr1.3:15428517-15428536 | None:intergenic | 35.0% |
| !! | TCGTATTCTGGTTTGTACTT+GGG | - | chr1.3:15427094-15427113 | None:intergenic | 35.0% |
| !! | TTCGTATTCTGGTTTGTACT+TGG | - | chr1.3:15427095-15427114 | None:intergenic | 35.0% |
| !! | TTTTGAGTGATCCAGTACAA+AGG | + | chr1.3:15426387-15426406 | MS.gene93157:CDS | 35.0% |
| !!! | AAGAAAACTCGTTGTTTTGG+AGG | + | chr1.3:15427472-15427491 | MS.gene93157:intron | 35.0% |
| !!! | ATGTCATGCTTTTTTGTTCC+AGG | - | chr1.3:15429408-15429427 | None:intergenic | 35.0% |
| AGGTAGCGATTATTGAGATC+TGG | + | chr1.3:15429343-15429362 | MS.gene93157:intron | 40.0% | |
| AGTGATCCAGTACAAAGGAA+TGG | + | chr1.3:15426392-15426411 | MS.gene93157:CDS | 40.0% | |
| ATATGTTCGTGGTGACCAAA+AGG | + | chr1.3:15427705-15427724 | MS.gene93157:CDS | 40.0% | |
| ATGGCTTCATGGTATACATG+AGG | - | chr1.3:15428783-15428802 | None:intergenic | 40.0% | |
| ATTTGATCATCGGAAGCAGA+AGG | - | chr1.3:15426056-15426075 | None:intergenic | 40.0% | |
| CAAGCATAGTTTCTCTGTCA+AGG | - | chr1.3:15427255-15427274 | None:intergenic | 40.0% | |
| CACTACATTCAACTTCCACA+AGG | - | chr1.3:15428570-15428589 | None:intergenic | 40.0% | |
| CATCAAATGCGGGATTACAA+AGG | - | chr1.3:15430108-15430127 | None:intergenic | 40.0% | |
| CATGTATACCATGAAGCCAT+TGG | + | chr1.3:15428783-15428802 | MS.gene93157:intron | 40.0% | |
| CTACCGCTCTTAAAATTCTC+GGG | + | chr1.3:15429049-15429068 | MS.gene93157:CDS | 40.0% | |
| CTACCGTACCTGATTGAAAA+AGG | - | chr1.3:15429966-15429985 | None:intergenic | 40.0% | |
| CTTGTGGAAGTTGAATGTAG+TGG | + | chr1.3:15428568-15428587 | MS.gene93157:CDS | 40.0% | |
| GAAGAAACTGACATTAAGGG+AGG | - | chr1.3:15428372-15428391 | None:intergenic | 40.0% | |
| GAATTGTTTGAGGACTACGT+TGG | + | chr1.3:15427310-15427329 | MS.gene93157:CDS | 40.0% | |
| GCTACCGCTCTTAAAATTCT+CGG | + | chr1.3:15429048-15429067 | MS.gene93157:CDS | 40.0% | |
| GGATTTGCAGGAGAAGTTAA+AGG | + | chr1.3:15427384-15427403 | MS.gene93157:CDS | 40.0% | |
| GTCGCCTTATCAGTTAATAG+AGG | - | chr1.3:15429809-15429828 | None:intergenic | 40.0% | |
| GTGATCTGTAACATTGTAGC+CGG | - | chr1.3:15427015-15427034 | None:intergenic | 40.0% | |
| GTTTCATACCAATGGCTTCA+TGG | - | chr1.3:15428794-15428813 | None:intergenic | 40.0% | |
| TAATGCTGCACACAAATTCC+AGG | + | chr1.3:15426260-15426279 | MS.gene93157:CDS | 40.0% | |
| TAGCAGTTATAACGACACGA+TGG | + | chr1.3:15428103-15428122 | MS.gene93157:intron | 40.0% | |
| TATGTTCGTGGTGACCAAAA+GGG | + | chr1.3:15427706-15427725 | MS.gene93157:CDS | 40.0% | |
| TATTATTAAGCCGGCTGAAG+AGG | - | chr1.3:15429209-15429228 | None:intergenic | 40.0% | |
| TATTTGAGCCTAGCGTATCT+GGG | + | chr1.3:15428824-15428843 | MS.gene93157:intron | 40.0% | |
| TCACAGTTAACAGCTGCTAA+AGG | + | chr1.3:15428311-15428330 | MS.gene93157:CDS | 40.0% | |
| TCATCATCCACATCAAATGC+GGG | - | chr1.3:15430118-15430137 | None:intergenic | 40.0% | |
| TCGCAAAGCTTATTACCACA+AGG | + | chr1.3:15426076-15426095 | MS.gene93157:CDS | 40.0% | |
| TGAACTAGGTGATGAAAGTG+AGG | + | chr1.3:15427363-15427382 | MS.gene93157:CDS | 40.0% | |
| TGATGAAAGTGAGGATTTGC+AGG | + | chr1.3:15427372-15427391 | MS.gene93157:CDS | 40.0% | |
| TGGAATTTGTGTGCAGCATT+AGG | - | chr1.3:15426261-15426280 | None:intergenic | 40.0% | |
| TTATTTGAGCCTAGCGTATC+TGG | + | chr1.3:15428823-15428842 | MS.gene93157:intron | 40.0% | |
| TTGTAATCCCGCATTTGATG+TGG | + | chr1.3:15430108-15430127 | MS.gene93157:CDS | 40.0% | |
| TTTCTCAGCCAATATGTTCG+TGG | + | chr1.3:15427694-15427713 | MS.gene93157:CDS | 40.0% | |
| TTTGGTCACCACGAACATAT+TGG | - | chr1.3:15427705-15427724 | None:intergenic | 40.0% | |
| ! | ACATTGTAGCCGGAACTTTT+AGG | - | chr1.3:15427005-15427024 | None:intergenic | 40.0% |
| ! | ATTTTCACAAGAGCCTTTGC+TGG | + | chr1.3:15426832-15426851 | MS.gene93157:intron | 40.0% |
| ! | GCTTTTCTTCCCTTCCTTTT+TGG | - | chr1.3:15427654-15427673 | None:intergenic | 40.0% |
| !! | AGTTCCATTTCTGGCTGAAT+GGG | + | chr1.3:15428262-15428281 | MS.gene93157:CDS | 40.0% |
| !! | CTTCCCGAGAATTTTAAGAG+CGG | - | chr1.3:15429055-15429074 | None:intergenic | 40.0% |
| !!! | CTCCCTTTTTCAATCAGGTA+CGG | + | chr1.3:15429960-15429979 | MS.gene93157:intron | 40.0% |
| !!! | GGATCGTTTTGGTTTCTATC+AGG | - | chr1.3:15426240-15426259 | None:intergenic | 40.0% |
| !!! | TAGCCGGAACTTTTAGGTTT+CGG | - | chr1.3:15426999-15427018 | None:intergenic | 40.0% |
| !!! | TCGAACTCCCTTTTTCAATC+AGG | + | chr1.3:15429955-15429974 | MS.gene93157:CDS | 40.0% |
| AAAGGCTGCAACATAGACAC+GGG | - | chr1.3:15428159-15428178 | None:intergenic | 45.0% | |
| AAGCAGAAGGAGAAACTCCA+AGG | - | chr1.3:15426043-15426062 | None:intergenic | 45.0% | |
| ACTCGTGTCTGCATTTGTGT+CGG | + | chr1.3:15426664-15426683 | MS.gene93157:intron | 45.0% | |
| AGCACAGGAACTAGGGAAAA+AGG | + | chr1.3:15428226-15428245 | MS.gene93157:CDS | 45.0% | |
| ATACTCAAGACAAGCAGCAC+AGG | + | chr1.3:15428211-15428230 | MS.gene93157:CDS | 45.0% | |
| CAAAGGCTGCAACATAGACA+CGG | - | chr1.3:15428160-15428179 | None:intergenic | 45.0% | |
| CACATGTCTCATTGTCGCAT+CGG | - | chr1.3:15426587-15426606 | None:intergenic | 45.0% | |
| CATTAAGGGAGGGTTGCTAA+TGG | - | chr1.3:15428361-15428380 | None:intergenic | 45.0% | |
| CATTTGACACACGTGTGCAA+GGG | - | chr1.3:15428606-15428625 | None:intergenic | 45.0% | |
| GGGAAAAAGGCCCTTTATCT+TGG | + | chr1.3:15428239-15428258 | MS.gene93157:CDS | 45.0% | |
| GTACTGGATCACTCAAAACC+TGG | - | chr1.3:15426385-15426404 | None:intergenic | 45.0% | |
| TAAGGCGACGTTCTTCTTTC+AGG | + | chr1.3:15429820-15429839 | MS.gene93157:intron | 45.0% | |
| TCACTAATCCCAGATACGCT+AGG | - | chr1.3:15428835-15428854 | None:intergenic | 45.0% | |
| TCCCCGAAACCTAAAAGTTC+CGG | + | chr1.3:15426993-15427012 | MS.gene93157:intron | 45.0% | |
| TCGATGGCTTCTTCTGAACT+AGG | + | chr1.3:15427349-15427368 | MS.gene93157:CDS | 45.0% | |
| TTTCTGCTTCTGCAGGGTAT+CGG | + | chr1.3:15430067-15430086 | MS.gene93157:intron | 45.0% | |
| ! | GCTGAATGGGTTCGCAATAA+AGG | + | chr1.3:15428275-15428294 | MS.gene93157:CDS | 45.0% |
| ! | GTGCAGCATTAGGATCGTTT+TGG | - | chr1.3:15426251-15426270 | None:intergenic | 45.0% |
| !! | GAGTTCCATTTCTGGCTGAA+TGG | + | chr1.3:15428261-15428280 | MS.gene93157:CDS | 45.0% |
| !! | GATTTTGGGAGAAGCATACC+AGG | + | chr1.3:15426364-15426383 | MS.gene93157:intron | 45.0% |
| !! | GCTGTGTTTGCCTTGCTTTT+TGG | + | chr1.3:15427283-15427302 | MS.gene93157:CDS | 45.0% |
| !! | GCTGTTGATTCTGATGACGA+AGG | + | chr1.3:15429881-15429900 | MS.gene93157:CDS | 45.0% |
| !! | TGGCTTGTTACAAACACAGC+AGG | + | chr1.3:15426901-15426920 | MS.gene93157:intron | 45.0% |
| !!! | AACTTTTAGGTTTCGGGGAC+TGG | - | chr1.3:15426992-15427011 | None:intergenic | 45.0% |
| !!! | AGCCGGAACTTTTAGGTTTC+GGG | - | chr1.3:15426998-15427017 | None:intergenic | 45.0% |
| !! | ATATTAATGTATTATTATAT+GGG | + | chr1.3:15427227-15427246 | MS.gene93157:intron | 5.0% |
| !! | TATAATTTAAATTATGTTAT+TGG | + | chr1.3:15426339-15426358 | MS.gene93157:intron | 5.0% |
| AGACAAGCAGCACAGGAACT+AGG | + | chr1.3:15428218-15428237 | MS.gene93157:CDS | 50.0% | |
| AGCAAGGCAAACACAGCCAT+TGG | - | chr1.3:15427280-15427299 | None:intergenic | 50.0% | |
| CCATTTGACACACGTGTGCA+AGG | - | chr1.3:15428607-15428626 | None:intergenic | 50.0% | |
| CCTTGCACACGTGTGTCAAA+TGG | + | chr1.3:15428604-15428623 | MS.gene93157:CDS | 50.0% | |
| CGAACCCATTCAGCCAGAAA+TGG | - | chr1.3:15428269-15428288 | None:intergenic | 50.0% | |
| CGTGTCTATGTTGCAGCCTT+TGG | + | chr1.3:15428158-15428177 | MS.gene93157:intron | 50.0% | |
| GACAAGCAGCACAGGAACTA+GGG | + | chr1.3:15428219-15428238 | MS.gene93157:CDS | 50.0% | |
| GCATCTAGCTGTTGCATCGA+TGG | + | chr1.3:15427333-15427352 | MS.gene93157:CDS | 50.0% | |
| GCCTCTGTATTAGCCAGCAA+AGG | - | chr1.3:15426848-15426867 | None:intergenic | 50.0% | |
| GGACTTAGATCCTCTTCAGC+CGG | + | chr1.3:15429196-15429215 | MS.gene93157:intron | 50.0% | |
| GTTTCGGGGACTGGATTGTA+AGG | - | chr1.3:15426983-15427002 | None:intergenic | 50.0% | |
| TGTGACTGCCTAGCGTATCT+GGG | + | chr1.3:15428856-15428875 | MS.gene93157:intron | 50.0% | |
| TTGTGACTGCCTAGCGTATC+TGG | + | chr1.3:15428855-15428874 | MS.gene93157:intron | 50.0% | |
| ! | CGGCTGCAGAAGATCCATTT+TGG | + | chr1.3:15429270-15429289 | MS.gene93157:intron | 50.0% |
| ! | GCCTTTGCTGGCTAATACAG+AGG | + | chr1.3:15426844-15426863 | MS.gene93157:intron | 50.0% |
| ! | GCGCAGAATCTGAAGCAAGA+CGG | + | chr1.3:15427740-15427759 | MS.gene93157:CDS | 50.0% |
| !!! | GCCGGAACTTTTAGGTTTCG+GGG | - | chr1.3:15426997-15427016 | None:intergenic | 50.0% |
| GCAAGACGGCTTTCTCATGC+AGG | + | chr1.3:15427754-15427773 | MS.gene93157:CDS | 55.0% | |
| TTGCTTCAGATTCTGCGCGC+TGG | - | chr1.3:15427738-15427757 | None:intergenic | 55.0% | |
| !! | CGCGCTGGTAGAAACCCTTT+TGG | - | chr1.3:15427723-15427742 | None:intergenic | 55.0% |
| !! | TGCTTCTGCAGGGTATCGGT+AGG | + | chr1.3:15430071-15430090 | MS.gene93157:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 15426011 | 15430165 | 15426011 | ID=MS.gene93157 |
| chr1.3 | mRNA | 15426011 | 15430165 | 15426011 | ID=MS.gene93157.t1;Parent=MS.gene93157 |
| chr1.3 | exon | 15426011 | 15426097 | 15426011 | ID=MS.gene93157.t1.exon1;Parent=MS.gene93157.t1 |
| chr1.3 | CDS | 15426011 | 15426097 | 15426011 | ID=cds.MS.gene93157.t1;Parent=MS.gene93157.t1 |
| chr1.3 | exon | 15426222 | 15426281 | 15426222 | ID=MS.gene93157.t1.exon2;Parent=MS.gene93157.t1 |
| chr1.3 | CDS | 15426222 | 15426281 | 15426222 | ID=cds.MS.gene93157.t1;Parent=MS.gene93157.t1 |
| chr1.3 | exon | 15426365 | 15426447 | 15426365 | ID=MS.gene93157.t1.exon3;Parent=MS.gene93157.t1 |
| chr1.3 | CDS | 15426365 | 15426447 | 15426365 | ID=cds.MS.gene93157.t1;Parent=MS.gene93157.t1 |
| chr1.3 | exon | 15427261 | 15427405 | 15427261 | ID=MS.gene93157.t1.exon4;Parent=MS.gene93157.t1 |
| chr1.3 | CDS | 15427261 | 15427405 | 15427261 | ID=cds.MS.gene93157.t1;Parent=MS.gene93157.t1 |
| chr1.3 | exon | 15427646 | 15427775 | 15427646 | ID=MS.gene93157.t1.exon5;Parent=MS.gene93157.t1 |
| chr1.3 | CDS | 15427646 | 15427775 | 15427646 | ID=cds.MS.gene93157.t1;Parent=MS.gene93157.t1 |
| chr1.3 | exon | 15428174 | 15428332 | 15428174 | ID=MS.gene93157.t1.exon6;Parent=MS.gene93157.t1 |
| chr1.3 | CDS | 15428174 | 15428332 | 15428174 | ID=cds.MS.gene93157.t1;Parent=MS.gene93157.t1 |
| chr1.3 | exon | 15428450 | 15428625 | 15428450 | ID=MS.gene93157.t1.exon7;Parent=MS.gene93157.t1 |
| chr1.3 | CDS | 15428450 | 15428625 | 15428450 | ID=cds.MS.gene93157.t1;Parent=MS.gene93157.t1 |
| chr1.3 | exon | 15429003 | 15429083 | 15429003 | ID=MS.gene93157.t1.exon8;Parent=MS.gene93157.t1 |
| chr1.3 | CDS | 15429003 | 15429083 | 15429003 | ID=cds.MS.gene93157.t1;Parent=MS.gene93157.t1 |
| chr1.3 | exon | 15429842 | 15429976 | 15429842 | ID=MS.gene93157.t1.exon9;Parent=MS.gene93157.t1 |
| chr1.3 | CDS | 15429842 | 15429976 | 15429842 | ID=cds.MS.gene93157.t1;Parent=MS.gene93157.t1 |
| chr1.3 | exon | 15430082 | 15430165 | 15430082 | ID=MS.gene93157.t1.exon10;Parent=MS.gene93157.t1 |
| chr1.3 | CDS | 15430082 | 15430165 | 15430082 | ID=cds.MS.gene93157.t1;Parent=MS.gene93157.t1 |
| Gene Sequence |
| Protein sequence |
