Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene93759.t1 | XP_024628620.1 | 89.2 | 260 | 19 | 1 | 227 | 486 | 12 | 262 | 5.60E-125 | 458 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene93759.t1 | P29514 | 90.8 | 206 | 18 | 1 | 1 | 206 | 1 | 205 | 1.8e-108 | 394.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene93759.t1 | G7JIQ3 | 85.4 | 260 | 29 | 1 | 227 | 486 | 12 | 262 | 2.1e-118 | 435.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene97346 | MS.gene93759 | PPI |
MS.gene066439 | MS.gene93759 | PPI |
MS.gene93759 | MS.gene029093 | PPI |
MS.gene90825 | MS.gene93759 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene93759.t1 | MTR_4g083510 | 85.385 | 260 | 29 | 1 | 227 | 486 | 12 | 262 | 1.10e-149 | 430 |
MS.gene93759.t1 | MTR_8g107250 | 94.366 | 213 | 12 | 0 | 1 | 213 | 1 | 213 | 1.07e-146 | 427 |
MS.gene93759.t1 | MTR_0867s0010 | 76.154 | 260 | 52 | 2 | 227 | 486 | 12 | 261 | 5.96e-125 | 367 |
MS.gene93759.t1 | MTR_7g089120 | 87.793 | 213 | 25 | 1 | 1 | 213 | 1 | 212 | 9.67e-123 | 366 |
MS.gene93759.t1 | MTR_2g031310 | 85.915 | 213 | 29 | 1 | 1 | 213 | 1 | 212 | 3.09e-119 | 357 |
MS.gene93759.t1 | MTR_4g019090 | 85.915 | 213 | 29 | 1 | 1 | 213 | 1 | 212 | 3.29e-119 | 357 |
MS.gene93759.t1 | MTR_4g019110 | 85.915 | 213 | 29 | 1 | 1 | 213 | 1 | 212 | 4.65e-119 | 357 |
MS.gene93759.t1 | MTR_1g101130 | 86.385 | 213 | 28 | 1 | 1 | 213 | 1 | 212 | 1.65e-118 | 355 |
MS.gene93759.t1 | MTR_4g094535 | 84.977 | 213 | 31 | 1 | 1 | 213 | 1 | 212 | 6.41e-118 | 354 |
MS.gene93759.t1 | MTR_4g017630 | 83.871 | 217 | 34 | 1 | 1 | 217 | 1 | 216 | 8.93e-118 | 353 |
MS.gene93759.t1 | MTR_8g098360 | 85.990 | 207 | 28 | 1 | 1 | 207 | 1 | 206 | 1.68e-117 | 353 |
MS.gene93759.t1 | MTR_3g113970 | 82.870 | 216 | 32 | 2 | 1 | 213 | 1 | 214 | 8.28e-117 | 351 |
MS.gene93759.t1 | MTR_4g063670 | 68.462 | 260 | 72 | 2 | 227 | 486 | 12 | 261 | 4.69e-111 | 332 |
MS.gene93759.t1 | MTR_1g051185 | 59.231 | 260 | 71 | 2 | 227 | 486 | 12 | 236 | 2.39e-86 | 266 |
MS.gene93759.t1 | MTR_3g069460 | 61.047 | 172 | 58 | 1 | 227 | 398 | 12 | 174 | 4.75e-66 | 211 |
MS.gene93759.t1 | MTR_8g085980 | 45.673 | 208 | 112 | 1 | 1 | 207 | 1 | 208 | 5.60e-49 | 174 |
MS.gene93759.t1 | MTR_3g110720 | 46.154 | 208 | 111 | 1 | 1 | 207 | 1 | 208 | 6.27e-49 | 174 |
MS.gene93759.t1 | MTR_1g106005 | 45.192 | 208 | 113 | 1 | 1 | 207 | 1 | 208 | 1.28e-47 | 171 |
MS.gene93759.t1 | MTR_4g097830 | 44.811 | 212 | 108 | 2 | 1 | 207 | 1 | 208 | 1.30e-47 | 171 |
MS.gene93759.t1 | MTR_7g088160 | 45.133 | 226 | 105 | 6 | 235 | 455 | 75 | 286 | 3.37e-47 | 168 |
MS.gene93759.t1 | MTR_7g085800 | 44.231 | 208 | 115 | 1 | 1 | 207 | 1 | 208 | 1.38e-46 | 168 |
MS.gene93759.t1 | MTR_7g117050 | 38.647 | 207 | 122 | 4 | 2 | 205 | 3 | 207 | 2.40e-46 | 168 |
MS.gene93759.t1 | MTR_6g029190 | 44.019 | 209 | 115 | 1 | 1 | 207 | 1 | 209 | 1.15e-45 | 166 |
MS.gene93759.t1 | MTR_8g015750 | 64.138 | 145 | 35 | 2 | 342 | 486 | 1 | 128 | 3.34e-43 | 151 |
MS.gene93759.t1 | MTR_2g041400 | 43.204 | 206 | 113 | 2 | 1 | 206 | 1 | 202 | 5.05e-40 | 149 |
MS.gene93759.t1 | MTR_2g041670 | 43.204 | 206 | 113 | 2 | 1 | 206 | 1 | 202 | 1.50e-39 | 149 |
MS.gene93759.t1 | MTR_7g107340 | 48.684 | 152 | 70 | 6 | 293 | 439 | 98 | 246 | 3.42e-35 | 134 |
MS.gene93759.t1 | MTR_8g015740 | 75.000 | 80 | 11 | 1 | 227 | 306 | 60 | 130 | 5.60e-30 | 114 |
MS.gene93759.t1 | MTR_2g023560 | 77.419 | 62 | 14 | 0 | 270 | 331 | 57 | 118 | 2.92e-26 | 103 |
MS.gene93759.t1 | MTR_6g081150 | 37.179 | 156 | 56 | 5 | 294 | 447 | 40 | 155 | 2.95e-20 | 88.6 |
MS.gene93759.t1 | MTR_7g114170 | 38.798 | 183 | 66 | 9 | 233 | 415 | 61 | 197 | 1.01e-19 | 89.7 |
MS.gene93759.t1 | MTR_5g044920 | 77.551 | 49 | 2 | 1 | 258 | 306 | 17 | 56 | 1.26e-16 | 75.5 |
MS.gene93759.t1 | MTR_3g067785 | 28.108 | 185 | 117 | 5 | 248 | 423 | 61 | 238 | 2.82e-11 | 65.1 |
MS.gene93759.t1 | MTR_4g026120 | 28.108 | 185 | 117 | 5 | 248 | 423 | 61 | 238 | 2.92e-11 | 65.1 |
MS.gene93759.t1 | MTR_4g036435 | 28.108 | 185 | 117 | 5 | 248 | 423 | 61 | 238 | 2.92e-11 | 65.1 |
MS.gene93759.t1 | MTR_5g066280 | 28.108 | 185 | 117 | 5 | 248 | 423 | 61 | 238 | 3.06e-11 | 65.1 |
MS.gene93759.t1 | MTR_3g450670 | 25.153 | 163 | 115 | 3 | 234 | 396 | 92 | 247 | 6.54e-11 | 64.3 |
MS.gene93759.t1 | MTR_1g471070 | 25.153 | 163 | 115 | 3 | 234 | 396 | 92 | 247 | 6.54e-11 | 64.3 |
MS.gene93759.t1 | MTR_4g013220 | 27.568 | 185 | 118 | 5 | 248 | 423 | 61 | 238 | 7.63e-11 | 63.9 |
MS.gene93759.t1 | MTR_2g072860 | 26.250 | 160 | 111 | 3 | 237 | 396 | 31 | 183 | 9.50e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene93759.t1 | AT5G12250 | 88.263 | 213 | 24 | 1 | 1 | 213 | 1 | 212 | 2.79e-123 | 368 |
MS.gene93759.t1 | AT1G75780 | 84.977 | 213 | 32 | 0 | 1 | 213 | 1 | 213 | 6.08e-121 | 362 |
MS.gene93759.t1 | AT1G20010 | 84.507 | 213 | 33 | 0 | 1 | 213 | 1 | 213 | 1.92e-119 | 358 |
MS.gene93759.t1 | AT5G62700 | 85.446 | 213 | 30 | 1 | 1 | 213 | 1 | 212 | 2.58e-118 | 355 |
MS.gene93759.t1 | AT5G62690 | 85.446 | 213 | 30 | 1 | 1 | 213 | 1 | 212 | 2.58e-118 | 355 |
MS.gene93759.t1 | AT2G29550 | 85.915 | 213 | 29 | 1 | 1 | 213 | 1 | 212 | 1.05e-117 | 353 |
MS.gene93759.t1 | AT5G23860 | 85.915 | 213 | 29 | 1 | 1 | 213 | 1 | 212 | 1.83e-117 | 353 |
MS.gene93759.t1 | AT5G23860 | 85.915 | 213 | 29 | 1 | 1 | 213 | 1 | 212 | 1.83e-117 | 353 |
MS.gene93759.t1 | AT5G44340 | 85.990 | 207 | 28 | 1 | 1 | 207 | 1 | 206 | 3.09e-117 | 352 |
MS.gene93759.t1 | AT4G20890 | 83.099 | 213 | 35 | 1 | 1 | 213 | 1 | 212 | 1.88e-115 | 347 |
MS.gene93759.t1 | AT4G14960 | 46.154 | 208 | 111 | 1 | 1 | 207 | 1 | 208 | 3.10e-49 | 175 |
MS.gene93759.t1 | AT5G19780 | 45.673 | 208 | 112 | 1 | 1 | 207 | 1 | 208 | 7.66e-49 | 174 |
MS.gene93759.t1 | AT5G19770 | 45.673 | 208 | 112 | 1 | 1 | 207 | 1 | 208 | 7.66e-49 | 174 |
MS.gene93759.t1 | AT4G14960 | 46.154 | 208 | 111 | 1 | 1 | 207 | 1 | 208 | 9.61e-49 | 174 |
MS.gene93759.t1 | AT1G64740 | 45.192 | 208 | 113 | 1 | 1 | 207 | 1 | 208 | 3.51e-48 | 172 |
MS.gene93759.t1 | AT1G04820 | 45.673 | 208 | 112 | 1 | 1 | 207 | 1 | 208 | 5.92e-48 | 172 |
MS.gene93759.t1 | AT1G50010 | 45.673 | 208 | 112 | 1 | 1 | 207 | 1 | 208 | 5.92e-48 | 172 |
MS.gene93759.t1 | AT5G05620 | 39.130 | 207 | 121 | 4 | 2 | 205 | 3 | 207 | 6.21e-47 | 169 |
MS.gene93759.t1 | AT3G61650 | 39.130 | 207 | 121 | 4 | 2 | 205 | 3 | 207 | 8.70e-47 | 169 |
MS.gene93759.t1 | AT5G41220 | 37.963 | 216 | 112 | 8 | 259 | 460 | 202 | 409 | 9.40e-31 | 125 |
MS.gene93759.t1 | AT5G41220 | 37.963 | 216 | 112 | 8 | 259 | 460 | 210 | 417 | 1.03e-30 | 125 |
MS.gene93759.t1 | AT5G41220 | 37.963 | 216 | 112 | 8 | 259 | 460 | 260 | 467 | 1.29e-30 | 125 |
MS.gene93759.t1 | AT5G41240 | 37.173 | 191 | 107 | 6 | 270 | 448 | 267 | 456 | 3.40e-26 | 112 |
MS.gene93759.t1 | AT3G47680 | 35.714 | 196 | 114 | 6 | 245 | 438 | 23 | 208 | 2.44e-24 | 103 |
MS.gene93759.t1 | AT1G66235 | 29.412 | 187 | 116 | 5 | 276 | 447 | 7 | 192 | 6.52e-16 | 78.6 |
Find 126 sgRNAs with CRISPR-Local
Find 198 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCTTTCAAAGCATCAAATT+TGG | 0.164119 | 4.2:+263788 | None:intergenic |
CGGCAAGACAGCTTTGTATT+TGG | 0.180498 | 4.2:-265710 | MS.gene93759:CDS |
CAATCTCTTGATCATTTAAT+TGG | 0.210422 | 4.2:+264474 | None:intergenic |
ACCCTTGGAGAAATTGTTTC+CGG | 0.257678 | 4.2:+265676 | None:intergenic |
ATCAAATAGGAACAAAGTTC+TGG | 0.266102 | 4.2:-265928 | MS.gene93759:CDS |
CCAACAAACTTTGAAATAGA+TGG | 0.279570 | 4.2:+264137 | None:intergenic |
GCTGTCCGGACTGGCCCTTA+TGG | 0.282594 | 4.2:-265743 | MS.gene93759:CDS |
TTCCCTATATATTGTTCTAT+AGG | 0.298750 | 4.2:+265875 | None:intergenic |
CTGTCCGGACTGGCCCTTAT+GGG | 0.301471 | 4.2:-265742 | MS.gene93759:CDS |
TTGGGAGGAGGAACAGGTTC+TGG | 0.310249 | 4.2:-265443 | MS.gene93759:CDS |
CTTTGATCATTCCCAACAAT+TGG | 0.310977 | 4.2:+264272 | None:intergenic |
TTCAGCTTCTGGAGCATATT+CGG | 0.312536 | 4.2:-263922 | MS.gene93759:CDS |
AGAACAAAGAATTCAGCTTC+TGG | 0.340604 | 4.2:-263933 | MS.gene93759:CDS |
TGTTCCCAGGGCAGTGTTGA+TGG | 0.352200 | 4.2:-265789 | MS.gene93759:CDS |
TCCCTATATATTGTTCTATA+GGG | 0.356089 | 4.2:+265876 | None:intergenic |
CATCTATTTCAAAGTTTGTT+GGG | 0.369114 | 4.2:-264136 | MS.gene93759:CDS |
GATGAACCGAAATGGCTTGC+AGG | 0.369514 | 4.2:-263981 | MS.gene93759:CDS |
TCTTTCAAAGCATCAAATTT+GGG | 0.374468 | 4.2:+263789 | None:intergenic |
CAAATACAAAGCTGTCTTGC+CGG | 0.375753 | 4.2:+265711 | None:intergenic |
TCTTTCGAGTTGTTGAAGTT+TGG | 0.377742 | 4.2:+265850 | None:intergenic |
AGAAAACCAGAGGCACTTAA+AGG | 0.378046 | 4.2:-264182 | MS.gene93759:CDS |
AGCTTTGTATTTGGACAGTC+TGG | 0.381283 | 4.2:-265701 | MS.gene93759:CDS |
ACCCTATAGAACAATATATA+GGG | 0.386290 | 4.2:-265877 | MS.gene93759:CDS |
GACCCTATAGAACAATATAT+AGG | 0.386865 | 4.2:-265878 | MS.gene93759:CDS |
CACTCCTTGGGAGGAGGAAC+AGG | 0.387803 | 4.2:-265449 | MS.gene93759:CDS |
AACACTTTCTGTTCACCAAT+TGG | 0.388308 | 4.2:-265303 | MS.gene93759:CDS |
CATGCATTCTCAAGTGTGAA+TGG | 0.388314 | 4.2:+264017 | None:intergenic |
ACACAACCTGCAAGCCATTT+CGG | 0.388495 | 4.2:+263975 | None:intergenic |
CTCCGAGAGCGACAACATTT+CGG | 0.391789 | 4.2:-264075 | MS.gene93759:CDS |
ACAACTGTGTCTGACACCTT+TGG | 0.397823 | 4.2:+265341 | None:intergenic |
TCCTTCTTGTAATAAAGAAA+AGG | 0.399002 | 4.2:+265227 | None:intergenic |
ATTTCAAAGGATCCAATTGT+TGG | 0.399370 | 4.2:-264284 | MS.gene93759:CDS |
GGACAGTGTGGAAATCAAAT+AGG | 0.402215 | 4.2:-265941 | MS.gene93759:CDS |
TATTACAATGAGGGATCTAA+TGG | 0.406337 | 4.2:-265818 | MS.gene93759:CDS |
ATGAGAAGTTCATCCTCCTT+TGG | 0.406782 | 4.2:+264323 | None:intergenic |
TGCCGGAAAATCTGCCCATA+AGG | 0.410401 | 4.2:+265728 | None:intergenic |
CTCTGTCTTTCCATCTCCAA+AGG | 0.410913 | 4.2:-265357 | MS.gene93759:CDS |
GGTGGATTGTGTTCGCTTGT+TGG | 0.414830 | 4.2:+263879 | None:intergenic |
GCAACTTTCCTTCATTATCA+AGG | 0.420974 | 4.2:+265255 | None:intergenic |
ATTTCAAGTGTGCCACTCCT+TGG | 0.422331 | 4.2:-265462 | MS.gene93759:CDS |
GGCTTGGAAACAATTAATCT+TGG | 0.423881 | 4.2:-264425 | MS.gene93759:CDS |
TTTCAAGTGTGCCACTCCTT+GGG | 0.432378 | 4.2:-265461 | MS.gene93759:CDS |
CCATCTATTTCAAAGTTTGT+TGG | 0.437206 | 4.2:-264137 | MS.gene93759:CDS |
AATTGTTTCCAAGCCATCTT+GGG | 0.439909 | 4.2:+264433 | None:intergenic |
CGTGAGATTCTTCACATTCA+AGG | 0.440464 | 4.2:-265965 | MS.gene93759:CDS |
CATCGACCTTTAAGTGCCTC+TGG | 0.445875 | 4.2:+264176 | None:intergenic |
TCCAAGCCATCTTGGGTGCA+AGG | 0.447157 | 4.2:+264440 | None:intergenic |
GTGTTGATGGACCTTGAGCC+TGG | 0.447823 | 4.2:-265776 | MS.gene93759:CDS |
GGAGGAACAGGTTCTGGAAT+GGG | 0.448714 | 4.2:-265437 | MS.gene93759:CDS |
TTTCAAAGGATCCAATTGTT+GGG | 0.450141 | 4.2:-264283 | MS.gene93759:CDS |
CCTTCTTGTAATAAAGAAAA+GGG | 0.452263 | 4.2:+265228 | None:intergenic |
AAAGTGAGCATCATTCGATC+AGG | 0.458927 | 4.2:+265380 | None:intergenic |
ATGGCTTGCAGGTTGTGTAT+TGG | 0.465781 | 4.2:-263970 | MS.gene93759:CDS |
CTGGCACCATGGATGCTGTC+CGG | 0.468584 | 4.2:-265757 | MS.gene93759:CDS |
AAGGTCCATCAACACTGCCC+TGG | 0.469465 | 4.2:+265784 | None:intergenic |
TAATTGTTTCCAAGCCATCT+TGG | 0.472415 | 4.2:+264432 | None:intergenic |
TATTGAGAGATGAACCGAAA+TGG | 0.474221 | 4.2:-263989 | MS.gene93759:CDS |
GCCGGAAAATCTGCCCATAA+GGG | 0.475695 | 4.2:+265729 | None:intergenic |
AGCCGAAATGTTGTCGCTCT+CGG | 0.477888 | 4.2:+264073 | None:intergenic |
AGGAAAGTTGCTCTTGCATC+CGG | 0.477942 | 4.2:-265208 | MS.gene93759:intron |
ACAGAAAGTGTTGCATTGTA+AGG | 0.479132 | 4.2:+265314 | None:intergenic |
TGTTCGCTTGTTGGTGTTGG+TGG | 0.479445 | 4.2:+263888 | None:intergenic |
CCATCTTGGGTGCAAGGTTG+TGG | 0.481149 | 4.2:+264446 | None:intergenic |
GTATTTGGACAGTCTGGTGC+CGG | 0.481233 | 4.2:-265695 | MS.gene93759:CDS |
ACAACGTCCAATCGGTCAAA+AGG | 0.486049 | 4.2:-263856 | MS.gene93759:CDS |
CATCGGCATTCTCCACCAAT+TGG | 0.487134 | 4.2:+265288 | None:intergenic |
TCGGTCAAAAGGCGGCAAAA+AGG | 0.487566 | 4.2:-263845 | MS.gene93759:CDS |
ACCTTGCACCCAAGATGGCT+TGG | 0.489398 | 4.2:-264441 | MS.gene93759:CDS |
TCAAATAGGAACAAAGTTCT+GGG | 0.493352 | 4.2:-265927 | MS.gene93759:CDS |
ATGAACTTCTCATTCAATCA+TGG | 0.496152 | 4.2:-264313 | MS.gene93759:CDS |
TCTGCCCATAAGGGCCAGTC+CGG | 0.496292 | 4.2:+265738 | None:intergenic |
ACCATGGATGCTGTCCGGAC+TGG | 0.506468 | 4.2:-265752 | MS.gene93759:CDS |
CGGACAGCATCCATGGTGCC+AGG | 0.508780 | 4.2:+265758 | None:intergenic |
TTGTGTTCGCTTGTTGGTGT+TGG | 0.509472 | 4.2:+263885 | None:intergenic |
GAGAATTGTGATTGCTTGCA+AGG | 0.516718 | 4.2:-265593 | MS.gene93759:intron |
GCCAGTCCGGACAGCATCCA+TGG | 0.516786 | 4.2:+265751 | None:intergenic |
AATGGAGATAGAGAGAAAGA+AGG | 0.517552 | 4.2:-263696 | MS.gene93759:CDS |
AGGTCCATCAACACTGCCCT+GGG | 0.522893 | 4.2:+265785 | None:intergenic |
ACTTTCTGTTCACCAATTGG+TGG | 0.523935 | 4.2:-265300 | MS.gene93759:CDS |
GGAGAATGCCGATGAGTGTA+TGG | 0.526042 | 4.2:-265279 | MS.gene93759:CDS |
CTAATGGTCGTTATGTTCCC+AGG | 0.526452 | 4.2:-265802 | MS.gene93759:CDS |
ACTTTGTTCTTGATGTCGTA+AGG | 0.532008 | 4.2:-265625 | MS.gene93759:CDS |
TGAATGGTTCACGTACATCT+TGG | 0.533697 | 4.2:+264033 | None:intergenic |
CTTGAAAATTCTCGTCGCGA+TGG | 0.533833 | 4.2:+264207 | None:intergenic |
ACCCTCAGTGTAATGACCCT+TGG | 0.535115 | 4.2:+265661 | None:intergenic |
AATCCACCACAACGTCCAAT+CGG | 0.535919 | 4.2:-263864 | MS.gene93759:CDS |
AGGAGGAACAGGTTCTGGAA+TGG | 0.537634 | 4.2:-265438 | MS.gene93759:CDS |
GTCAAGGTTTATTACAATGA+GGG | 0.538427 | 4.2:-265827 | MS.gene93759:CDS |
GTGTCTGACACCTTTGGAGA+TGG | 0.540354 | 4.2:+265347 | None:intergenic |
AGGAACAAAGTTCTGGGAAG+CGG | 0.541062 | 4.2:-265921 | MS.gene93759:CDS |
CATTCACACTTGAGAATGCA+TGG | 0.543088 | 4.2:-264016 | MS.gene93759:CDS |
AAGCGGTATGCGATGAGCAC+GGG | 0.544401 | 4.2:-265904 | MS.gene93759:CDS |
TCCAAGGGTCATTACACTGA+GGG | 0.544772 | 4.2:-265662 | MS.gene93759:CDS |
GTGTGCCACTCCTTGGGAGG+AGG | 0.545564 | 4.2:-265455 | MS.gene93759:CDS |
ATCATGGCTCAATATTTCAA+AGG | 0.547059 | 4.2:-264297 | MS.gene93759:CDS |
TGTTCTTGATGTCGTAAGGA+AGG | 0.549190 | 4.2:-265621 | MS.gene93759:CDS |
CCACAACCTTGCACCCAAGA+TGG | 0.549550 | 4.2:-264446 | MS.gene93759:CDS |
CATCCATGGTGCCAGGCTCA+AGG | 0.552841 | 4.2:+265765 | None:intergenic |
AGTCAAGGTTTATTACAATG+AGG | 0.563542 | 4.2:-265828 | MS.gene93759:CDS |
GTTCGCTTGTTGGTGTTGGT+GGG | 0.567081 | 4.2:+263889 | None:intergenic |
GAAGCGGTATGCGATGAGCA+CGG | 0.591189 | 4.2:-265905 | MS.gene93759:CDS |
CAAGTGTGCCACTCCTTGGG+AGG | 0.591945 | 4.2:-265458 | MS.gene93759:CDS |
GTTGTCGCTCTAAAGAAAAG+TGG | 0.594037 | 4.2:-264101 | MS.gene93759:CDS |
GCCGGAAACAATTTCTCCAA+GGG | 0.595118 | 4.2:-265677 | MS.gene93759:CDS |
ATCAAGGACCATACACTCAT+CGG | 0.595529 | 4.2:+265271 | None:intergenic |
AATAAGATTTAAACCAAAGG+AGG | 0.598325 | 4.2:-264336 | MS.gene93759:CDS |
AGAACCTGTTCCTCCTCCCA+AGG | 0.602121 | 4.2:+265445 | None:intergenic |
TGACCGATTGGACGTTGTGG+TGG | 0.605293 | 4.2:+263861 | None:intergenic |
CTGTTCCTCCTCCCAAGGAG+TGG | 0.606656 | 4.2:+265450 | None:intergenic |
TGCCGGAAACAATTTCTCCA+AGG | 0.607800 | 4.2:-265678 | MS.gene93759:CDS |
TCAACAACTCGAAAGAGTCA+AGG | 0.608404 | 4.2:-265843 | MS.gene93759:CDS |
CAGAGGCACTTAAAGGTCGA+TGG | 0.621203 | 4.2:-264175 | MS.gene93759:CDS |
TCTTGATGTCGTAAGGAAGG+AGG | 0.621829 | 4.2:-265618 | MS.gene93759:CDS |
TAATGGTCGTTATGTTCCCA+GGG | 0.628338 | 4.2:-265801 | MS.gene93759:CDS |
CACATTCAAGGAGGACAGTG+TGG | 0.628454 | 4.2:-265953 | MS.gene93759:CDS |
GAAAATAAGATTTAAACCAA+AGG | 0.637971 | 4.2:-264339 | MS.gene93759:CDS |
AAGTGAGCATCATTCGATCA+GGG | 0.643313 | 4.2:+265381 | None:intergenic |
GAAGGGAAAAGAAAAGCTTG+TGG | 0.644203 | 4.2:-263823 | MS.gene93759:CDS |
CGAAATGTTGTCGCTCTCGG+AGG | 0.658068 | 4.2:+264076 | None:intergenic |
ACGTCCAATCGGTCAAAAGG+CGG | 0.661921 | 4.2:-263853 | MS.gene93759:CDS |
GGACCTTGAGCCTGGCACCA+TGG | 0.666276 | 4.2:-265768 | MS.gene93759:CDS |
TGTATGGTCCTTGATAATGA+AGG | 0.669823 | 4.2:-265263 | MS.gene93759:CDS |
ATTGTTGGGAATGATCAAAG+AGG | 0.674803 | 4.2:-264269 | MS.gene93759:CDS |
CTCCAAGGGTCATTACACTG+AGG | 0.702690 | 4.2:-265663 | MS.gene93759:CDS |
GAGATTCTTCACATTCAAGG+AGG | 0.711143 | 4.2:-265962 | MS.gene93759:CDS |
TGAAGAAGTCAGAGCTACGT+CGG | 0.718655 | 4.2:-264402 | MS.gene93759:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAAAAACCAATTATAA+TGG | + | chr4.2:264686-264705 | None:intergenic | 10.0% |
!!! | ATTTTATTTACCATTATAAT+TGG | - | chr4.2:264673-264692 | MS.gene93759:intron | 10.0% |
!! | TTATTGTGATTGATAAATAT+AGG | - | chr4.2:264175-264194 | MS.gene93759:CDS | 15.0% |
!! | CAGAATTTATTTAAAGATGT+TGG | - | chr4.2:264152-264171 | MS.gene93759:CDS | 20.0% |
!! | GAAAATAAGATTTAAACCAA+AGG | - | chr4.2:265321-265340 | MS.gene93759:CDS | 20.0% |
!!! | AAAGCATGATTTTGAAAATT+TGG | + | chr4.2:265037-265056 | None:intergenic | 20.0% |
!!! | AAGCATGATTTTGAAAATTT+GGG | + | chr4.2:265036-265055 | None:intergenic | 20.0% |
! | AATAAGATTTAAACCAAAGG+AGG | - | chr4.2:265324-265343 | MS.gene93759:CDS | 25.0% |
! | ACCCTATAGAACAATATATA+GGG | - | chr4.2:263783-263802 | MS.gene93759:CDS | 25.0% |
! | ATATTCAAAGATATGTGCAA+CGG | + | chr4.2:264747-264766 | None:intergenic | 25.0% |
! | ATCTTCACAAATATATGCAA+CGG | + | chr4.2:264797-264816 | None:intergenic | 25.0% |
! | CAATCTCTTGATCATTTAAT+TGG | + | chr4.2:265189-265208 | None:intergenic | 25.0% |
! | CCTTCTTGTAATAAAGAAAA+GGG | + | chr4.2:264435-264454 | None:intergenic | 25.0% |
! | GAAAAAAAGATTTCAACCAA+AGG | - | chr4.2:265294-265313 | MS.gene93759:CDS | 25.0% |
! | TCCCTATATATTGTTCTATA+GGG | + | chr4.2:263787-263806 | None:intergenic | 25.0% |
! | TCCTTCTTGTAATAAAGAAA+AGG | + | chr4.2:264436-264455 | None:intergenic | 25.0% |
! | TTCCCTATATATTGTTCTAT+AGG | + | chr4.2:263788-263807 | None:intergenic | 25.0% |
!! | ATCTTTCAAAGCATCAAATT+TGG | + | chr4.2:265875-265894 | None:intergenic | 25.0% |
!! | CATCTATTTCAAAGTTTGTT+GGG | - | chr4.2:265524-265543 | MS.gene93759:intron | 25.0% |
!! | TCTTTCAAAGCATCAAATTT+GGG | + | chr4.2:265874-265893 | None:intergenic | 25.0% |
!! | TGAATTCTTTGTTCTTTTTG+CGG | + | chr4.2:265722-265741 | None:intergenic | 25.0% |
!!! | AAAAATGTTGATAGTGGTAT+GGG | + | chr4.2:265108-265127 | None:intergenic | 25.0% |
!!! | ATTGGATGCATTTTAAAAGT+AGG | + | chr4.2:264993-265012 | None:intergenic | 25.0% |
!!! | GTAGTTGGTAACAATTATAA+TGG | + | chr4.2:264715-264734 | None:intergenic | 25.0% |
AAAAAGATTTCAACCAAAGG+AGG | - | chr4.2:265297-265316 | MS.gene93759:CDS | 30.0% | |
AACCAAGAATTATTGTGGTT+GGG | + | chr4.2:264914-264933 | None:intergenic | 30.0% | |
AGTCAAGGTTTATTACAATG+AGG | - | chr4.2:263832-263851 | MS.gene93759:CDS | 30.0% | |
AGTTGAACCAAGAATTATTG+TGG | + | chr4.2:264919-264938 | None:intergenic | 30.0% | |
ATCAAATAGGAACAAAGTTC+TGG | - | chr4.2:263732-263751 | MS.gene93759:CDS | 30.0% | |
ATCATGGCTCAATATTTCAA+AGG | - | chr4.2:265363-265382 | MS.gene93759:CDS | 30.0% | |
ATGAACTTCTCATTCAATCA+TGG | - | chr4.2:265347-265366 | MS.gene93759:CDS | 30.0% | |
ATTTCAAAGGATCCAATTGT+TGG | - | chr4.2:265376-265395 | MS.gene93759:CDS | 30.0% | |
CAACGGTAATATTAAGTAGT+TGG | + | chr4.2:264730-264749 | None:intergenic | 30.0% | |
CCATCTATTTCAAAGTTTGT+TGG | - | chr4.2:265523-265542 | MS.gene93759:intron | 30.0% | |
GACCCTATAGAACAATATAT+AGG | - | chr4.2:263782-263801 | MS.gene93759:CDS | 30.0% | |
GTCAAGGTTTATTACAATGA+GGG | - | chr4.2:263833-263852 | MS.gene93759:CDS | 30.0% | |
TATTACAATGAGGGATCTAA+TGG | - | chr4.2:263842-263861 | MS.gene93759:CDS | 30.0% | |
TCAAATAGGAACAAAGTTCT+GGG | - | chr4.2:263733-263752 | MS.gene93759:CDS | 30.0% | |
TTTCAAAGGATCCAATTGTT+GGG | - | chr4.2:265377-265396 | MS.gene93759:CDS | 30.0% | |
! | ATCAAAGAGGAGATAGTTTT+TGG | - | chr4.2:265404-265423 | MS.gene93759:CDS | 30.0% |
! | CCCTTTTCTTTATTACAAGA+AGG | - | chr4.2:264432-264451 | MS.gene93759:CDS | 30.0% |
! | GAGATGAAAAATGTTGATAG+TGG | + | chr4.2:265114-265133 | None:intergenic | 30.0% |
! | GTAAAGAAGAAAAAGTGTGT+TGG | + | chr4.2:264843-264862 | None:intergenic | 30.0% |
!! | CCAACAAACTTTGAAATAGA+TGG | + | chr4.2:265526-265545 | None:intergenic | 30.0% |
!! | GAAAAATGTTGATAGTGGTA+TGG | + | chr4.2:265109-265128 | None:intergenic | 30.0% |
!!! | AGGAGACATTTTGTTGATTT+TGG | + | chr4.2:264973-264992 | None:intergenic | 30.0% |
!!! | CGTTTTGAGAGTGAAAAAAA+TGG | - | chr4.2:265946-265965 | MS.gene93759:CDS | 30.0% |
!!! | TTTTGTTGATTTTGGATGCA+TGG | + | chr4.2:264965-264984 | None:intergenic | 30.0% |
AACACTTTCTGTTCACCAAT+TGG | - | chr4.2:264357-264376 | MS.gene93759:CDS | 35.0% | |
AATGGAGATAGAGAGAAAGA+AGG | - | chr4.2:265964-265983 | MS.gene93759:CDS | 35.0% | |
AATTGTTTCCAAGCCATCTT+GGG | + | chr4.2:265230-265249 | None:intergenic | 35.0% | |
AATTTCCAATGCGTGGATTT+GGG | + | chr4.2:265063-265082 | None:intergenic | 35.0% | |
ACCAAGAATTATTGTGGTTG+GGG | + | chr4.2:264913-264932 | None:intergenic | 35.0% | |
ACGGTAAGAAAAAGTTGCAA+CGG | + | chr4.2:264778-264797 | None:intergenic | 35.0% | |
ACTTTGTTCTTGATGTCGTA+AGG | - | chr4.2:264035-264054 | MS.gene93759:CDS | 35.0% | |
AGAACAAAGAATTCAGCTTC+TGG | - | chr4.2:265727-265746 | MS.gene93759:CDS | 35.0% | |
ATTGTTGGGAATGATCAAAG+AGG | - | chr4.2:265391-265410 | MS.gene93759:CDS | 35.0% | |
CTTTGATCATTCCCAACAAT+TGG | + | chr4.2:265391-265410 | None:intergenic | 35.0% | |
GAACCAAGAATTATTGTGGT+TGG | + | chr4.2:264915-264934 | None:intergenic | 35.0% | |
GCAACTTTCCTTCATTATCA+AGG | + | chr4.2:264408-264427 | None:intergenic | 35.0% | |
GCAAGGTAATCAAACATCAT+GGG | - | chr4.2:264084-264103 | MS.gene93759:CDS | 35.0% | |
GGCTTGGAAACAATTAATCT+TGG | - | chr4.2:265235-265254 | MS.gene93759:CDS | 35.0% | |
TAATTGTTTCCAAGCCATCT+TGG | + | chr4.2:265231-265250 | None:intergenic | 35.0% | |
TAATTTCCAATGCGTGGATT+TGG | + | chr4.2:265064-265083 | None:intergenic | 35.0% | |
TATGGATAATTTCCAATGCG+TGG | + | chr4.2:265070-265089 | None:intergenic | 35.0% | |
TATTGAGAGATGAACCGAAA+TGG | - | chr4.2:265671-265690 | MS.gene93759:CDS | 35.0% | |
TGCAAGGTAATCAAACATCA+TGG | - | chr4.2:264083-264102 | MS.gene93759:CDS | 35.0% | |
TGGTTCAACTACTTGCAAAA+TGG | - | chr4.2:264929-264948 | MS.gene93759:intron | 35.0% | |
TTCAACTACTTGCAAAATGG+TGG | - | chr4.2:264932-264951 | MS.gene93759:intron | 35.0% | |
TTGGGTTATGATGTGAGTTT+GGG | + | chr4.2:265018-265037 | None:intergenic | 35.0% | |
! | ATGATGTGAGTTTGGGTTAT+TGG | + | chr4.2:265011-265030 | None:intergenic | 35.0% |
! | TTCTTTGTTCTTTTTGCGGA+CGG | + | chr4.2:265718-265737 | None:intergenic | 35.0% |
! | TTTGGGTTATGATGTGAGTT+TGG | + | chr4.2:265019-265038 | None:intergenic | 35.0% |
!! | ACAGAAAGTGTTGCATTGTA+AGG | + | chr4.2:264349-264368 | None:intergenic | 35.0% |
!! | GATAGTTTTTGGAAGAGGAT+TGG | - | chr4.2:265415-265434 | MS.gene93759:CDS | 35.0% |
!! | TCTTTCGAGTTGTTGAAGTT+TGG | + | chr4.2:263813-263832 | None:intergenic | 35.0% |
!! | TGTATGGTCCTTGATAATGA+AGG | - | chr4.2:264397-264416 | MS.gene93759:CDS | 35.0% |
!! | TTTTCAAGAGAGAAAACCAG+AGG | - | chr4.2:265468-265487 | MS.gene93759:intron | 35.0% |
!!! | AATCTTATTTTCGCCTCCTT+TGG | + | chr4.2:265313-265332 | None:intergenic | 35.0% |
AAAGTGAGCATCATTCGATC+AGG | + | chr4.2:264283-264302 | None:intergenic | 40.0% | |
AAGTGAGCATCATTCGATCA+GGG | + | chr4.2:264282-264301 | None:intergenic | 40.0% | |
ACCCCAACCACAATAATTCT+TGG | - | chr4.2:264909-264928 | MS.gene93759:intron | 40.0% | |
ACCCTTGGAGAAATTGTTTC+CGG | + | chr4.2:263987-264006 | None:intergenic | 40.0% | |
ACTTTCTGTTCACCAATTGG+TGG | - | chr4.2:264360-264379 | MS.gene93759:CDS | 40.0% | |
ATCAAGGACCATACACTCAT+CGG | + | chr4.2:264392-264411 | None:intergenic | 40.0% | |
ATGAGAAGTTCATCCTCCTT+TGG | + | chr4.2:265340-265359 | None:intergenic | 40.0% | |
ATGGATAATTGCACGACAGT+TGG | - | chr4.2:264544-264563 | MS.gene93759:intron | 40.0% | |
CAAATACAAAGCTGTCTTGC+CGG | + | chr4.2:263952-263971 | None:intergenic | 40.0% | |
CATGCATTCTCAAGTGTGAA+TGG | + | chr4.2:265646-265665 | None:intergenic | 40.0% | |
CATTCACACTTGAGAATGCA+TGG | - | chr4.2:265644-265663 | MS.gene93759:CDS | 40.0% | |
CATTTGCACTTCATGAGACA+TGG | + | chr4.2:265152-265171 | None:intergenic | 40.0% | |
CGTGAGATTCTTCACATTCA+AGG | - | chr4.2:263695-263714 | MS.gene93759:CDS | 40.0% | |
GAAGGGAAAAGAAAAGCTTG+TGG | - | chr4.2:265837-265856 | MS.gene93759:CDS | 40.0% | |
GAGAATTGTGATTGCTTGCA+AGG | - | chr4.2:264067-264086 | MS.gene93759:CDS | 40.0% | |
GAGATTCTTCACATTCAAGG+AGG | - | chr4.2:263698-263717 | MS.gene93759:CDS | 40.0% | |
GGACAGTGTGGAAATCAAAT+AGG | - | chr4.2:263719-263738 | MS.gene93759:CDS | 40.0% | |
GGGTAAGATGGTGTATGATA+TGG | + | chr4.2:265088-265107 | None:intergenic | 40.0% | |
TAAGACACAGTGGTAGAGTT+TGG | + | chr4.2:264592-264611 | None:intergenic | 40.0% | |
TAATGGTCGTTATGTTCCCA+GGG | - | chr4.2:263859-263878 | MS.gene93759:CDS | 40.0% | |
TCAACAACTCGAAAGAGTCA+AGG | - | chr4.2:263817-263836 | MS.gene93759:CDS | 40.0% | |
TGAATGGTTCACGTACATCT+TGG | + | chr4.2:265630-265649 | None:intergenic | 40.0% | |
TGTTCTTGATGTCGTAAGGA+AGG | - | chr4.2:264039-264058 | MS.gene93759:CDS | 40.0% | |
TTATTGTGGTTGGGGTTCAT+TGG | + | chr4.2:264905-264924 | None:intergenic | 40.0% | |
TTTATCCCAAATCCACGCAT+TGG | - | chr4.2:265055-265074 | MS.gene93759:intron | 40.0% | |
! | AGCTTTGTATTTGGACAGTC+TGG | - | chr4.2:263959-263978 | MS.gene93759:CDS | 40.0% |
!! | AGAAAACCAGAGGCACTTAA+AGG | - | chr4.2:265478-265497 | MS.gene93759:intron | 40.0% |
!! | AGAATTGCTCTAAGACACAG+TGG | + | chr4.2:264602-264621 | None:intergenic | 40.0% |
!! | GAGGAGATAGTTTTTGGAAG+AGG | - | chr4.2:265410-265429 | MS.gene93759:CDS | 40.0% |
!! | GTTGTCGCTCTAAAGAAAAG+TGG | - | chr4.2:265559-265578 | MS.gene93759:intron | 40.0% |
!! | TGATAGTGGTATGGGTAAGA+TGG | + | chr4.2:265100-265119 | None:intergenic | 40.0% |
!! | TTCAGCTTCTGGAGCATATT+CGG | - | chr4.2:265738-265757 | MS.gene93759:CDS | 40.0% |
!!! | TGTTGATTTTGGATGCATGG+AGG | + | chr4.2:264962-264981 | None:intergenic | 40.0% |
AATCCACCACAACGTCCAAT+CGG | - | chr4.2:265796-265815 | MS.gene93759:CDS | 45.0% | |
ACAACGTCCAATCGGTCAAA+AGG | - | chr4.2:265804-265823 | MS.gene93759:CDS | 45.0% | |
ACAACTGTGTCTGACACCTT+TGG | + | chr4.2:264322-264341 | None:intergenic | 45.0% | |
ACACAACCTGCAAGCCATTT+CGG | + | chr4.2:265688-265707 | None:intergenic | 45.0% | |
AGGAAAGTTGCTCTTGCATC+CGG | - | chr4.2:264452-264471 | MS.gene93759:CDS | 45.0% | |
CAAAAGGCGGCAAAAAGGAA+GGG | - | chr4.2:265820-265839 | MS.gene93759:CDS | 45.0% | |
CCAAAAGACACCACCGATAA+TGG | + | chr4.2:264486-264505 | None:intergenic | 45.0% | |
CTAATGGTCGTTATGTTCCC+AGG | - | chr4.2:263858-263877 | MS.gene93759:CDS | 45.0% | |
CTCTGTCTTTCCATCTCCAA+AGG | - | chr4.2:264303-264322 | MS.gene93759:CDS | 45.0% | |
CTTGAAAATTCTCGTCGCGA+TGG | + | chr4.2:265456-265475 | None:intergenic | 45.0% | |
GCCGGAAACAATTTCTCCAA+GGG | - | chr4.2:263983-264002 | MS.gene93759:CDS | 45.0% | |
TCAAAAGGCGGCAAAAAGGA+AGG | - | chr4.2:265819-265838 | MS.gene93759:CDS | 45.0% | |
TCCAAGGGTCATTACACTGA+GGG | - | chr4.2:263998-264017 | MS.gene93759:CDS | 45.0% | |
TCTTGATGTCGTAAGGAAGG+AGG | - | chr4.2:264042-264061 | MS.gene93759:CDS | 45.0% | |
TGAAGAAGTCAGAGCTACGT+CGG | - | chr4.2:265258-265277 | MS.gene93759:CDS | 45.0% | |
TGCACTTCATGAGACATGGT+GGG | + | chr4.2:265148-265167 | None:intergenic | 45.0% | |
TGCCGGAAACAATTTCTCCA+AGG | - | chr4.2:263982-264001 | MS.gene93759:CDS | 45.0% | |
TTGCACTTCATGAGACATGG+TGG | + | chr4.2:265149-265168 | None:intergenic | 45.0% | |
! | ACAGTGGTAGAGTTTGGAAC+CGG | + | chr4.2:264586-264605 | None:intergenic | 45.0% |
! | ACCGATAATGGTGCTCTTAC+CGG | + | chr4.2:264474-264493 | None:intergenic | 45.0% |
! | ATGGCTTGCAGGTTGTGTAT+TGG | - | chr4.2:265690-265709 | MS.gene93759:CDS | 45.0% |
! | ATTTCAAGTGTGCCACTCCT+TGG | - | chr4.2:264198-264217 | MS.gene93759:CDS | 45.0% |
! | CCATTATCGGTGGTGTCTTT+TGG | - | chr4.2:264483-264502 | MS.gene93759:CDS | 45.0% |
! | CGGCAAGACAGCTTTGTATT+TGG | - | chr4.2:263950-263969 | MS.gene93759:CDS | 45.0% |
! | TGGTGTCTTTTCTTGGCTAC+CGG | - | chr4.2:264564-264583 | MS.gene93759:intron | 45.0% |
! | TTGTGTTCGCTTGTTGGTGT+TGG | + | chr4.2:265778-265797 | None:intergenic | 45.0% |
! | TTTCAAGTGTGCCACTCCTT+GGG | - | chr4.2:264199-264218 | MS.gene93759:CDS | 45.0% |
! | TTTTGACCGATTGGACGTTG+TGG | + | chr4.2:265805-265824 | None:intergenic | 45.0% |
!! | AGGAACAAAGTTCTGGGAAG+CGG | - | chr4.2:263739-263758 | MS.gene93759:CDS | 45.0% |
!! | CGACAGTTGGTGTCTTTTCT+TGG | - | chr4.2:264557-264576 | MS.gene93759:intron | 45.0% |
!! | TCCGGTAAGAGCACCATTAT+CGG | - | chr4.2:264470-264489 | MS.gene93759:CDS | 45.0% |
ACCCTCAGTGTAATGACCCT+TGG | + | chr4.2:264002-264021 | None:intergenic | 50.0% | |
ACGTCCAATCGGTCAAAAGG+CGG | - | chr4.2:265807-265826 | MS.gene93759:CDS | 50.0% | |
AGCCGAAATGTTGTCGCTCT+CGG | + | chr4.2:265590-265609 | None:intergenic | 50.0% | |
CACATTCAAGGAGGACAGTG+TGG | - | chr4.2:263707-263726 | MS.gene93759:CDS | 50.0% | |
CATCGACCTTTAAGTGCCTC+TGG | + | chr4.2:265487-265506 | None:intergenic | 50.0% | |
CATCGGCATTCTCCACCAAT+TGG | + | chr4.2:264375-264394 | None:intergenic | 50.0% | |
CTCCAAGGGTCATTACACTG+AGG | - | chr4.2:263997-264016 | MS.gene93759:CDS | 50.0% | |
CTCCGAGAGCGACAACATTT+CGG | - | chr4.2:265585-265604 | MS.gene93759:intron | 50.0% | |
GCCGGAAAATCTGCCCATAA+GGG | + | chr4.2:263934-263953 | None:intergenic | 50.0% | |
GGAGAATGCCGATGAGTGTA+TGG | - | chr4.2:264381-264400 | MS.gene93759:CDS | 50.0% | |
GTATTTGGACAGTCTGGTGC+CGG | - | chr4.2:263965-263984 | MS.gene93759:CDS | 50.0% | |
TCGGTCAAAAGGCGGCAAAA+AGG | - | chr4.2:265815-265834 | MS.gene93759:CDS | 50.0% | |
TGCCGGAAAATCTGCCCATA+AGG | + | chr4.2:263935-263954 | None:intergenic | 50.0% | |
! | GATGAACCGAAATGGCTTGC+AGG | - | chr4.2:265679-265698 | MS.gene93759:CDS | 50.0% |
! | GCCCTTATGGGCAGATTTTC+CGG | - | chr4.2:263930-263949 | MS.gene93759:CDS | 50.0% |
! | GTGTCTGACACCTTTGGAGA+TGG | + | chr4.2:264316-264335 | None:intergenic | 50.0% |
! | GTGTTGCTACTGTGTCTGGA+AGG | - | chr4.2:264520-264539 | MS.gene93759:intron | 50.0% |
! | TTTGCCGCCTTTTGACCGAT+TGG | + | chr4.2:265814-265833 | None:intergenic | 50.0% |
!! | AGGAGGAACAGGTTCTGGAA+TGG | - | chr4.2:264222-264241 | MS.gene93759:CDS | 50.0% |
!! | CAGAGGCACTTAAAGGTCGA+TGG | - | chr4.2:265485-265504 | MS.gene93759:intron | 50.0% |
!! | GGAGGAACAGGTTCTGGAAT+GGG | - | chr4.2:264223-264242 | MS.gene93759:CDS | 50.0% |
!! | GGTAAGAGCACCATTATCGG+TGG | - | chr4.2:264473-264492 | MS.gene93759:CDS | 50.0% |
!! | GGTGGATTGTGTTCGCTTGT+TGG | + | chr4.2:265784-265803 | None:intergenic | 50.0% |
!! | GTTCGCTTGTTGGTGTTGGT+GGG | + | chr4.2:265774-265793 | None:intergenic | 50.0% |
!! | TGTTCGCTTGTTGGTGTTGG+TGG | + | chr4.2:265775-265794 | None:intergenic | 50.0% |
AAGCGGTATGCGATGAGCAC+GGG | - | chr4.2:263756-263775 | MS.gene93759:CDS | 55.0% | |
AAGGTCCATCAACACTGCCC+TGG | + | chr4.2:263879-263898 | None:intergenic | 55.0% | |
ACCTTGCACCCAAGATGGCT+TGG | - | chr4.2:265219-265238 | MS.gene93759:CDS | 55.0% | |
AGAACCTGTTCCTCCTCCCA+AGG | + | chr4.2:264218-264237 | None:intergenic | 55.0% | |
AGGTCCATCAACACTGCCCT+GGG | + | chr4.2:263878-263897 | None:intergenic | 55.0% | |
CCACAACCTTGCACCCAAGA+TGG | - | chr4.2:265214-265233 | MS.gene93759:CDS | 55.0% | |
CCAGACACAGTAGCAACACG+TGG | + | chr4.2:264519-264538 | None:intergenic | 55.0% | |
CCATCTTGGGTGCAAGGTTG+TGG | + | chr4.2:265217-265236 | None:intergenic | 55.0% | |
CGAAATGTTGTCGCTCTCGG+AGG | + | chr4.2:265587-265606 | None:intergenic | 55.0% | |
GAAGCGGTATGCGATGAGCA+CGG | - | chr4.2:263755-263774 | MS.gene93759:CDS | 55.0% | |
GCTACTGTGTCTGGAAGGCA+TGG | - | chr4.2:264525-264544 | MS.gene93759:intron | 55.0% | |
TCCAAGCCATCTTGGGTGCA+AGG | + | chr4.2:265223-265242 | None:intergenic | 55.0% | |
TGACCGATTGGACGTTGTGG+TGG | + | chr4.2:265802-265821 | None:intergenic | 55.0% | |
TTGGGAGGAGGAACAGGTTC+TGG | - | chr4.2:264217-264236 | MS.gene93759:CDS | 55.0% | |
! | CCACGTGTTGCTACTGTGTC+TGG | - | chr4.2:264516-264535 | MS.gene93759:intron | 55.0% |
! | GTGTTGATGGACCTTGAGCC+TGG | - | chr4.2:263884-263903 | MS.gene93759:CDS | 55.0% |
! | TGTTCCCAGGGCAGTGTTGA+TGG | - | chr4.2:263871-263890 | MS.gene93759:CDS | 55.0% |
ACCATGGATGCTGTCCGGAC+TGG | - | chr4.2:263908-263927 | MS.gene93759:CDS | 60.0% | |
CACTCCTTGGGAGGAGGAAC+AGG | - | chr4.2:264211-264230 | MS.gene93759:CDS | 60.0% | |
CTGGCACCATGGATGCTGTC+CGG | - | chr4.2:263903-263922 | MS.gene93759:CDS | 60.0% | |
CTGTTCCTCCTCCCAAGGAG+TGG | + | chr4.2:264213-264232 | None:intergenic | 60.0% | |
TCTGCCCATAAGGGCCAGTC+CGG | + | chr4.2:263925-263944 | None:intergenic | 60.0% | |
! | CAAGTGTGCCACTCCTTGGG+AGG | - | chr4.2:264202-264221 | MS.gene93759:CDS | 60.0% |
! | CATCCATGGTGCCAGGCTCA+AGG | + | chr4.2:263898-263917 | None:intergenic | 60.0% |
!! | CTGTCCGGACTGGCCCTTAT+GGG | - | chr4.2:263918-263937 | MS.gene93759:CDS | 60.0% |
CGGACAGCATCCATGGTGCC+AGG | + | chr4.2:263905-263924 | None:intergenic | 65.0% | |
GCCAGTCCGGACAGCATCCA+TGG | + | chr4.2:263912-263931 | None:intergenic | 65.0% | |
GGACCTTGAGCCTGGCACCA+TGG | - | chr4.2:263892-263911 | MS.gene93759:CDS | 65.0% | |
! | GTGTGCCACTCCTTGGGAGG+AGG | - | chr4.2:264205-264224 | MS.gene93759:CDS | 65.0% |
!! | GCTGTCCGGACTGGCCCTTA+TGG | - | chr4.2:263917-263936 | MS.gene93759:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 263692 | 265990 | 263692 | ID=MS.gene93759 |
chr4.2 | mRNA | 263692 | 265990 | 263692 | ID=MS.gene93759.t1;Parent=MS.gene93759 |
chr4.2 | exon | 265594 | 265990 | 265594 | ID=MS.gene93759.t1.exon1;Parent=MS.gene93759.t1 |
chr4.2 | CDS | 265594 | 265990 | 265594 | ID=cds.MS.gene93759.t1;Parent=MS.gene93759.t1 |
chr4.2 | exon | 265209 | 265485 | 265209 | ID=MS.gene93759.t1.exon2;Parent=MS.gene93759.t1 |
chr4.2 | CDS | 265209 | 265485 | 265209 | ID=cds.MS.gene93759.t1;Parent=MS.gene93759.t1 |
chr4.2 | exon | 263692 | 264502 | 263692 | ID=MS.gene93759.t1.exon3;Parent=MS.gene93759.t1 |
chr4.2 | CDS | 263692 | 264502 | 263692 | ID=cds.MS.gene93759.t1;Parent=MS.gene93759.t1 |
Gene Sequence |
Protein sequence |