Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94227.t1 | XP_003616672.1 | 98.3 | 179 | 1 | 1 | 1 | 179 | 1 | 177 | 5.00E-92 | 347.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94227.t1 | Q9SRL8 | 80.2 | 111 | 22 | 0 | 1 | 111 | 1 | 111 | 3.6e-46 | 186.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94227.t1 | G7K270 | 98.3 | 179 | 1 | 1 | 1 | 179 | 1 | 177 | 3.6e-92 | 347.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene94227.t1 | TF | LOB |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050432 | MS.gene94227 | 0.839771 | 1.30E-57 | -1.69E-46 |
| MS.gene051255 | MS.gene94227 | 0.80728 | 5.46E-50 | -1.69E-46 |
| MS.gene051692 | MS.gene94227 | 0.808851 | 2.53E-50 | -1.69E-46 |
| MS.gene053209 | MS.gene94227 | 0.824221 | 9.08E-54 | -1.69E-46 |
| MS.gene055277 | MS.gene94227 | 0.800848 | 1.19E-48 | -1.69E-46 |
| MS.gene056410 | MS.gene94227 | 0.806595 | 7.62E-50 | -1.69E-46 |
| MS.gene056897 | MS.gene94227 | 0.80119 | 1.01E-48 | -1.69E-46 |
| MS.gene06037 | MS.gene94227 | 0.815598 | 8.52E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94227.t1 | MTR_5g083010 | 98.324 | 179 | 1 | 1 | 1 | 179 | 1 | 177 | 7.01e-129 | 359 |
| MS.gene94227.t1 | MTR_3g071420 | 75.275 | 182 | 42 | 1 | 1 | 179 | 4 | 185 | 3.53e-89 | 259 |
| MS.gene94227.t1 | MTR_7g033800 | 50.667 | 150 | 70 | 1 | 8 | 153 | 8 | 157 | 1.40e-48 | 155 |
| MS.gene94227.t1 | MTR_4g105170 | 46.154 | 169 | 79 | 2 | 9 | 177 | 9 | 165 | 3.68e-47 | 152 |
| MS.gene94227.t1 | MTR_6g005070 | 64.151 | 106 | 38 | 0 | 8 | 113 | 6 | 111 | 1.30e-44 | 144 |
| MS.gene94227.t1 | MTR_3g077240 | 63.551 | 107 | 39 | 0 | 9 | 115 | 8 | 114 | 2.01e-44 | 145 |
| MS.gene94227.t1 | MTR_3g031660 | 55.000 | 120 | 54 | 0 | 8 | 127 | 4 | 123 | 1.39e-42 | 140 |
| MS.gene94227.t1 | MTR_5g083230 | 63.366 | 101 | 37 | 0 | 8 | 108 | 3 | 103 | 3.10e-42 | 139 |
| MS.gene94227.t1 | MTR_6g005080 | 61.321 | 106 | 41 | 0 | 8 | 113 | 7 | 112 | 5.83e-42 | 137 |
| MS.gene94227.t1 | MTR_4g083680 | 60.396 | 101 | 40 | 0 | 8 | 108 | 12 | 112 | 9.92e-42 | 138 |
| MS.gene94227.t1 | MTR_3g071590 | 62.376 | 101 | 38 | 0 | 8 | 108 | 5 | 105 | 1.99e-41 | 137 |
| MS.gene94227.t1 | MTR_2g068760 | 58.491 | 106 | 44 | 0 | 3 | 108 | 5 | 110 | 6.18e-41 | 135 |
| MS.gene94227.t1 | MTR_3g073690 | 60.952 | 105 | 41 | 0 | 8 | 112 | 6 | 110 | 4.57e-40 | 135 |
| MS.gene94227.t1 | MTR_5g017950 | 60.952 | 105 | 41 | 0 | 8 | 112 | 5 | 109 | 8.21e-40 | 137 |
| MS.gene94227.t1 | MTR_5g083960 | 48.529 | 136 | 69 | 1 | 8 | 142 | 36 | 171 | 5.26e-39 | 132 |
| MS.gene94227.t1 | MTR_8g040900 | 59.829 | 117 | 43 | 1 | 8 | 120 | 4 | 120 | 3.46e-38 | 130 |
| MS.gene94227.t1 | MTR_3g452660 | 48.872 | 133 | 62 | 2 | 8 | 140 | 4 | 130 | 4.37e-38 | 132 |
| MS.gene94227.t1 | MTR_3g094690 | 56.863 | 102 | 44 | 0 | 12 | 113 | 48 | 149 | 5.45e-36 | 125 |
| MS.gene94227.t1 | MTR_2g093310 | 55.882 | 102 | 45 | 0 | 10 | 111 | 32 | 133 | 8.16e-36 | 124 |
| MS.gene94227.t1 | MTR_7g096530 | 51.327 | 113 | 54 | 1 | 2 | 113 | 5 | 117 | 1.03e-35 | 124 |
| MS.gene94227.t1 | MTR_5g075020 | 61.290 | 93 | 30 | 1 | 4 | 90 | 30 | 122 | 3.85e-35 | 123 |
| MS.gene94227.t1 | MTR_8g036085 | 54.902 | 102 | 45 | 1 | 12 | 112 | 24 | 125 | 3.92e-35 | 123 |
| MS.gene94227.t1 | MTR_8g036105 | 50.442 | 113 | 55 | 1 | 1 | 112 | 8 | 120 | 5.53e-35 | 122 |
| MS.gene94227.t1 | MTR_5g075020 | 61.290 | 93 | 30 | 1 | 4 | 90 | 34 | 126 | 6.90e-35 | 122 |
| MS.gene94227.t1 | MTR_1g095850 | 55.446 | 101 | 45 | 0 | 12 | 112 | 73 | 173 | 9.26e-35 | 122 |
| MS.gene94227.t1 | MTR_7g074990 | 51.485 | 101 | 48 | 1 | 12 | 111 | 21 | 121 | 2.13e-34 | 121 |
| MS.gene94227.t1 | MTR_3g094690 | 55.882 | 102 | 44 | 1 | 12 | 113 | 48 | 148 | 1.73e-33 | 119 |
| MS.gene94227.t1 | MTR_1g070220 | 52.778 | 108 | 49 | 2 | 3 | 108 | 6 | 113 | 3.37e-33 | 117 |
| MS.gene94227.t1 | MTR_1g070205 | 46.721 | 122 | 63 | 2 | 12 | 131 | 13 | 134 | 3.56e-33 | 118 |
| MS.gene94227.t1 | MTR_4g060950 | 56.701 | 97 | 41 | 1 | 10 | 105 | 23 | 119 | 3.69e-33 | 117 |
| MS.gene94227.t1 | MTR_7g096610 | 50.893 | 112 | 53 | 2 | 8 | 117 | 5 | 116 | 4.09e-33 | 117 |
| MS.gene94227.t1 | MTR_6g027710 | 50.495 | 101 | 49 | 1 | 12 | 111 | 41 | 141 | 5.02e-33 | 117 |
| MS.gene94227.t1 | MTR_7g075230 | 50.000 | 108 | 51 | 2 | 8 | 112 | 9 | 116 | 1.42e-30 | 110 |
| MS.gene94227.t1 | MTR_5g080470 | 44.340 | 106 | 58 | 1 | 9 | 113 | 5 | 110 | 3.54e-30 | 109 |
| MS.gene94227.t1 | MTR_7g028905 | 43.689 | 103 | 58 | 0 | 10 | 112 | 4 | 106 | 1.44e-29 | 105 |
| MS.gene94227.t1 | MTR_8g079660 | 49.020 | 102 | 52 | 0 | 12 | 113 | 9 | 110 | 8.36e-29 | 107 |
| MS.gene94227.t1 | MTR_5g093010 | 42.574 | 101 | 58 | 0 | 12 | 112 | 6 | 106 | 5.44e-28 | 102 |
| MS.gene94227.t1 | MTR_8g079620 | 47.059 | 102 | 54 | 0 | 12 | 113 | 9 | 110 | 3.34e-27 | 102 |
| MS.gene94227.t1 | MTR_6g027700 | 44.898 | 98 | 53 | 1 | 12 | 108 | 8 | 105 | 4.18e-26 | 99.4 |
| MS.gene94227.t1 | MTR_4g099230 | 36.090 | 133 | 74 | 4 | 12 | 137 | 3 | 131 | 1.80e-24 | 93.6 |
| MS.gene94227.t1 | MTR_4g107450 | 31.481 | 162 | 104 | 2 | 8 | 169 | 7 | 161 | 7.26e-23 | 92.8 |
| MS.gene94227.t1 | MTR_8g079580 | 43.689 | 103 | 57 | 1 | 12 | 113 | 9 | 111 | 1.01e-22 | 90.9 |
| MS.gene94227.t1 | MTR_2g100020 | 35.455 | 110 | 71 | 0 | 8 | 117 | 16 | 125 | 2.46e-22 | 90.9 |
| MS.gene94227.t1 | MTR_6g011230 | 43.529 | 85 | 48 | 0 | 8 | 92 | 8 | 92 | 6.61e-22 | 88.2 |
| MS.gene94227.t1 | MTR_6g011200 | 37.615 | 109 | 67 | 1 | 7 | 114 | 5 | 113 | 8.30e-22 | 89.0 |
| MS.gene94227.t1 | MTR_8g017090 | 35.238 | 105 | 68 | 0 | 8 | 112 | 9 | 113 | 9.58e-21 | 87.0 |
| MS.gene94227.t1 | MTR_6g011250 | 36.697 | 109 | 68 | 1 | 7 | 114 | 5 | 113 | 4.51e-20 | 83.2 |
| MS.gene94227.t1 | MTR_5g085390 | 32.394 | 142 | 88 | 3 | 7 | 140 | 5 | 146 | 7.87e-19 | 80.9 |
| MS.gene94227.t1 | MTR_4g088035 | 31.111 | 90 | 62 | 0 | 8 | 97 | 3 | 92 | 2.02e-14 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94227.t1 | AT3G11090 | 80.180 | 111 | 22 | 0 | 1 | 111 | 1 | 111 | 1.40e-63 | 193 |
| MS.gene94227.t1 | AT5G63090 | 57.983 | 119 | 47 | 1 | 9 | 124 | 9 | 127 | 2.45e-44 | 145 |
| MS.gene94227.t1 | AT5G63090 | 57.983 | 119 | 47 | 1 | 9 | 124 | 9 | 127 | 2.45e-44 | 145 |
| MS.gene94227.t1 | AT5G63090 | 57.983 | 119 | 47 | 1 | 9 | 124 | 9 | 127 | 2.45e-44 | 145 |
| MS.gene94227.t1 | AT5G63090 | 57.983 | 119 | 47 | 1 | 9 | 124 | 9 | 127 | 2.45e-44 | 145 |
| MS.gene94227.t1 | AT3G27650 | 56.780 | 118 | 51 | 0 | 8 | 125 | 36 | 153 | 6.74e-44 | 143 |
| MS.gene94227.t1 | AT5G66870 | 54.015 | 137 | 54 | 2 | 8 | 143 | 4 | 132 | 8.46e-44 | 147 |
| MS.gene94227.t1 | AT2G30130 | 56.780 | 118 | 50 | 1 | 8 | 125 | 5 | 121 | 2.03e-41 | 138 |
| MS.gene94227.t1 | AT1G65620 | 54.400 | 125 | 57 | 0 | 8 | 132 | 6 | 130 | 1.43e-39 | 133 |
| MS.gene94227.t1 | AT1G65620 | 54.400 | 125 | 57 | 0 | 8 | 132 | 6 | 130 | 1.43e-39 | 133 |
| MS.gene94227.t1 | AT1G65620 | 54.400 | 125 | 57 | 0 | 8 | 132 | 6 | 130 | 1.43e-39 | 133 |
| MS.gene94227.t1 | AT1G65620 | 54.400 | 125 | 57 | 0 | 8 | 132 | 6 | 130 | 1.43e-39 | 133 |
| MS.gene94227.t1 | AT1G65620 | 54.400 | 125 | 57 | 0 | 8 | 132 | 6 | 130 | 1.43e-39 | 133 |
| MS.gene94227.t1 | AT2G23660 | 56.731 | 104 | 45 | 0 | 8 | 111 | 2 | 105 | 2.16e-39 | 136 |
| MS.gene94227.t1 | AT2G23660 | 56.731 | 104 | 45 | 0 | 8 | 111 | 2 | 105 | 2.16e-39 | 136 |
| MS.gene94227.t1 | AT2G23660 | 56.731 | 104 | 45 | 0 | 8 | 111 | 2 | 105 | 2.16e-39 | 136 |
| MS.gene94227.t1 | AT2G30340 | 52.941 | 119 | 54 | 1 | 12 | 130 | 53 | 169 | 1.22e-37 | 130 |
| MS.gene94227.t1 | AT2G30340 | 52.941 | 119 | 54 | 1 | 12 | 130 | 54 | 170 | 1.29e-37 | 130 |
| MS.gene94227.t1 | AT1G31320 | 60.000 | 90 | 36 | 0 | 8 | 97 | 10 | 99 | 1.05e-36 | 125 |
| MS.gene94227.t1 | AT1G07900 | 58.586 | 99 | 41 | 0 | 10 | 108 | 32 | 130 | 3.40e-36 | 124 |
| MS.gene94227.t1 | AT1G16530 | 42.105 | 152 | 82 | 3 | 2 | 151 | 4 | 151 | 6.19e-36 | 123 |
| MS.gene94227.t1 | AT2G28500 | 56.863 | 102 | 44 | 0 | 10 | 111 | 54 | 155 | 1.79e-35 | 124 |
| MS.gene94227.t1 | AT4G00210 | 44.604 | 139 | 76 | 1 | 1 | 138 | 1 | 139 | 2.89e-35 | 123 |
| MS.gene94227.t1 | AT3G03760 | 52.427 | 103 | 48 | 1 | 10 | 111 | 50 | 152 | 3.04e-35 | 124 |
| MS.gene94227.t1 | AT2G40470 | 68.750 | 80 | 25 | 0 | 12 | 91 | 21 | 100 | 5.11e-35 | 122 |
| MS.gene94227.t1 | AT2G42430 | 43.919 | 148 | 80 | 2 | 2 | 146 | 6 | 153 | 1.04e-34 | 122 |
| MS.gene94227.t1 | AT2G40470 | 68.750 | 80 | 25 | 0 | 12 | 91 | 46 | 125 | 1.18e-34 | 122 |
| MS.gene94227.t1 | AT4G00220 | 56.000 | 100 | 43 | 1 | 14 | 112 | 20 | 119 | 1.73e-34 | 121 |
| MS.gene94227.t1 | AT2G45420 | 53.000 | 100 | 46 | 1 | 14 | 112 | 40 | 139 | 6.23e-34 | 120 |
| MS.gene94227.t1 | AT2G42440 | 46.552 | 116 | 61 | 1 | 8 | 122 | 4 | 119 | 3.91e-33 | 118 |
| MS.gene94227.t1 | AT3G58190 | 48.673 | 113 | 57 | 1 | 12 | 123 | 12 | 124 | 5.86e-33 | 117 |
| MS.gene94227.t1 | AT3G26620 | 45.000 | 120 | 62 | 1 | 12 | 131 | 6 | 121 | 8.98e-33 | 114 |
| MS.gene94227.t1 | AT3G26660 | 45.690 | 116 | 62 | 1 | 12 | 127 | 6 | 120 | 1.14e-32 | 113 |
| MS.gene94227.t1 | AT5G06080 | 47.115 | 104 | 54 | 1 | 9 | 111 | 5 | 108 | 2.80e-31 | 111 |
| MS.gene94227.t1 | AT2G45410 | 51.000 | 100 | 48 | 1 | 14 | 112 | 19 | 118 | 5.91e-31 | 111 |
| MS.gene94227.t1 | AT2G31310 | 44.340 | 106 | 58 | 1 | 9 | 113 | 5 | 110 | 3.76e-30 | 109 |
| MS.gene94227.t1 | AT5G35900 | 38.686 | 137 | 83 | 1 | 8 | 143 | 2 | 138 | 8.79e-28 | 103 |
| MS.gene94227.t1 | AT3G50510 | 40.000 | 135 | 78 | 2 | 7 | 140 | 8 | 140 | 3.39e-27 | 102 |
| MS.gene94227.t1 | AT3G50510 | 40.000 | 135 | 78 | 2 | 7 | 140 | 8 | 140 | 3.39e-27 | 102 |
| MS.gene94227.t1 | AT3G13850 | 38.235 | 102 | 63 | 0 | 11 | 112 | 36 | 137 | 7.79e-24 | 94.7 |
| MS.gene94227.t1 | AT1G72980 | 38.739 | 111 | 68 | 0 | 8 | 118 | 10 | 120 | 5.37e-22 | 89.0 |
| MS.gene94227.t1 | AT3G47870 | 41.379 | 87 | 51 | 0 | 8 | 94 | 33 | 119 | 5.46e-20 | 85.5 |
| MS.gene94227.t1 | AT1G06280 | 46.154 | 78 | 42 | 0 | 11 | 88 | 24 | 101 | 3.60e-18 | 78.6 |
| MS.gene94227.t1 | AT4G22700 | 37.069 | 116 | 69 | 3 | 8 | 121 | 2 | 115 | 1.12e-17 | 77.0 |
| MS.gene94227.t1 | AT2G19820 | 35.165 | 91 | 57 | 2 | 12 | 101 | 13 | 102 | 3.33e-12 | 60.8 |
| MS.gene94227.t1 | AT5G15060 | 38.158 | 76 | 43 | 2 | 10 | 82 | 16 | 90 | 4.89e-12 | 60.8 |
Find 25 sgRNAs with CRISPR-Local
Find 28 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCGAAAGTGCACAAAGTATT+TGG | 0.201773 | 5.4:-65756388 | MS.gene94227:CDS |
| AGGCTTAGAGATCCTGTTTA+TGG | 0.242904 | 5.4:-65756277 | MS.gene94227:CDS |
| GGAAGAAACTGTGAATTCTT+TGG | 0.269255 | 5.4:-65756317 | MS.gene94227:CDS |
| TATGGCGCAAATATACAATT+TGG | 0.301099 | 5.4:+65756439 | None:intergenic |
| ATTTGAATTCATCATATCAT+TGG | 0.327427 | 5.4:+65756126 | None:intergenic |
| CACTCATCGGAGCGAAAGTA+TGG | 0.344487 | 5.4:+65756421 | None:intergenic |
| CGCGAATTTCTTGCACTCAT+CGG | 0.347852 | 5.4:+65756408 | None:intergenic |
| GTTTCTTCCCTTTGTTCCTC+TGG | 0.351316 | 5.4:+65756331 | None:intergenic |
| TAACAGCATTAAAATATATA+AGG | 0.400998 | 5.4:+65755983 | None:intergenic |
| GAAAAGGAAGAAGTTGAAGT+TGG | 0.404016 | 5.4:+65756148 | None:intergenic |
| GCACCTATGCATCCATAAAC+AGG | 0.435136 | 5.4:+65756265 | None:intergenic |
| TGCCATTGCTAAGGATCGTC+TGG | 0.450338 | 5.4:-65756197 | MS.gene94227:CDS |
| ATTCATCATATCATTGGAAA+AGG | 0.457173 | 5.4:+65756132 | None:intergenic |
| CGAAGTTCCAGAGGAACAAA+GGG | 0.517072 | 5.4:-65756338 | MS.gene94227:CDS |
| AAATTTGCAGGCTGCACAAG+AGG | 0.545401 | 5.4:+65756480 | None:intergenic |
| GCATGATCTTGCCATTGCTA+AGG | 0.551324 | 5.4:-65756206 | MS.gene94227:CDS |
| GATCCTGTTTATGGATGCAT+AGG | 0.564582 | 5.4:-65756268 | MS.gene94227:CDS |
| GCACAAGAGGAACTTGACCT+TGG | 0.570179 | 5.4:+65756493 | None:intergenic |
| TCGAAGTTCCAGAGGAACAA+AGG | 0.580233 | 5.4:-65756339 | MS.gene94227:CDS |
| TGGCTTATGAAGCTGATGCA+AGG | 0.584407 | 5.4:-65756297 | MS.gene94227:CDS |
| CACTCTAGAGAAATCATGAA+GGG | 0.616662 | 5.4:-65756523 | None:intergenic |
| AGCCAGACGATCCTTAGCAA+TGG | 0.638509 | 5.4:+65756195 | None:intergenic |
| TCATGAAGGGTTATGAACCA+AGG | 0.655644 | 5.4:-65756510 | MS.gene94227:CDS |
| GATTCTGATCGAAGTTCCAG+AGG | 0.676488 | 5.4:-65756347 | MS.gene94227:CDS |
| TCGTCTGGCTCGTTGCGCTG+CGG | 0.690033 | 5.4:-65756182 | MS.gene94227:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTGAATTCATCATATCAT+TGG | + | chr5.4:65756376-65756395 | None:intergenic | 20.0% |
| ! | ATTCATCATATCATTGGAAA+AGG | + | chr5.4:65756370-65756389 | None:intergenic | 25.0% |
| TATGGCGCAAATATACAATT+TGG | + | chr5.4:65756063-65756082 | None:intergenic | 30.0% | |
| !! | TCTTCTTTTGAGAAATTTGC+AGG | + | chr5.4:65756034-65756053 | None:intergenic | 30.0% |
| CAAGTGAAAAACTCAGGAAA+AGG | + | chr5.4:65756411-65756430 | None:intergenic | 35.0% | |
| GAAAAGGAAGAAGTTGAAGT+TGG | + | chr5.4:65756354-65756373 | None:intergenic | 35.0% | |
| GGAAGAAACTGTGAATTCTT+TGG | - | chr5.4:65756182-65756201 | MS.gene94227:CDS | 35.0% | |
| AGGCTTAGAGATCCTGTTTA+TGG | - | chr5.4:65756222-65756241 | MS.gene94227:CDS | 40.0% | |
| GATCCTGTTTATGGATGCAT+AGG | - | chr5.4:65756231-65756250 | MS.gene94227:CDS | 40.0% | |
| GTGAAAAACTCAGGAAAAGG+TGG | + | chr5.4:65756408-65756427 | None:intergenic | 40.0% | |
| TCACTGCAAGTGAAAAACTC+AGG | + | chr5.4:65756417-65756436 | None:intergenic | 40.0% | |
| ! | AGCACTTTTGCAAAGGAAGA+TGG | - | chr5.4:65756260-65756279 | MS.gene94227:CDS | 40.0% |
| ! | GCGAAAGTGCACAAAGTATT+TGG | - | chr5.4:65756111-65756130 | MS.gene94227:CDS | 40.0% |
| ! | GTGCTATAGCACTTTTGCAA+AGG | - | chr5.4:65756253-65756272 | MS.gene94227:CDS | 40.0% |
| AAATTTGCAGGCTGCACAAG+AGG | + | chr5.4:65756022-65756041 | None:intergenic | 45.0% | |
| CGAAGTTCCAGAGGAACAAA+GGG | - | chr5.4:65756161-65756180 | MS.gene94227:CDS | 45.0% | |
| CGCGAATTTCTTGCACTCAT+CGG | + | chr5.4:65756094-65756113 | None:intergenic | 45.0% | |
| GATTCTGATCGAAGTTCCAG+AGG | - | chr5.4:65756152-65756171 | MS.gene94227:CDS | 45.0% | |
| GCACCTATGCATCCATAAAC+AGG | + | chr5.4:65756237-65756256 | None:intergenic | 45.0% | |
| GCATGATCTTGCCATTGCTA+AGG | - | chr5.4:65756293-65756312 | MS.gene94227:CDS | 45.0% | |
| GTTTCTTCCCTTTGTTCCTC+TGG | + | chr5.4:65756171-65756190 | None:intergenic | 45.0% | |
| TCGAAGTTCCAGAGGAACAA+AGG | - | chr5.4:65756160-65756179 | MS.gene94227:CDS | 45.0% | |
| TGGCTTATGAAGCTGATGCA+AGG | - | chr5.4:65756202-65756221 | MS.gene94227:CDS | 45.0% | |
| AGCCAGACGATCCTTAGCAA+TGG | + | chr5.4:65756307-65756326 | None:intergenic | 50.0% | |
| CACTCATCGGAGCGAAAGTA+TGG | + | chr5.4:65756081-65756100 | None:intergenic | 50.0% | |
| GCACAAGAGGAACTTGACCT+TGG | + | chr5.4:65756009-65756028 | None:intergenic | 50.0% | |
| TGCCATTGCTAAGGATCGTC+TGG | - | chr5.4:65756302-65756321 | MS.gene94227:CDS | 50.0% | |
| ! | TCGTCTGGCTCGTTGCGCTG+CGG | - | chr5.4:65756317-65756336 | MS.gene94227:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 65755991 | 65756530 | 65755991 | ID=MS.gene94227 |
| chr5.4 | mRNA | 65755991 | 65756530 | 65755991 | ID=MS.gene94227.t1;Parent=MS.gene94227 |
| chr5.4 | exon | 65755991 | 65756530 | 65755991 | ID=MS.gene94227.t1.exon1;Parent=MS.gene94227.t1 |
| chr5.4 | CDS | 65755991 | 65756530 | 65755991 | ID=cds.MS.gene94227.t1;Parent=MS.gene94227.t1 |
| Gene Sequence |
| Protein sequence |
